Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010717

Physical Location & Seq

Genomic Coordinates Reverse (-)

53722713 .. 53727334

Gene Structure 4622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0392000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGCCTAGCACGAGGGTTATCATCAGAAAAGAATTGTGTCTTCTTATCTGCTTCATATTTTTATTTAGCTTCTTTTTATCTTCATCTTTTGCAACAGACACACTAACACCCGGAGACACACTTACAGTCAATCAAACCCTGGTTTCAGCTGGTGGAGTTTTCGAGCTTGGCTTCTTCAAAAGTGACTTTTCAGGTAGTTACTATCTAGGAATTTGGTTCAGAGCCGATGCAAACAAGGTTGTTTGGGTTGGTAACCGCAGAGTTCCCATATTGGACGCTTCAGGAAGTCTTCAAATACTATCTGGGAATCTGGTTCTTATAGACCGCCGTCAAAACCCTTTGCTAGTCAGTACAGGAAATGTTGCCATGGCCATAAACGCAACCGCAACACTTCTTGACTCTGGAAATTTTATCCTTAAAGAAGAAAATACAGGTACTATGCTATGGCAAAGTTTTGATATTCCTACTGATACTTATCTTCCTGGGATGAAACTTGGTTGGTCTCAGCTTAACAGTAACCAGCCAATCCTTCGCGCTTTTGTTTCTTGGGTCAACCCCCAAAATCCTGCTCTTGGCAACTTTACTTTAACCATGAACAGGATCAACTTTAAAAAGCTTCAGGTTTGGCGAGGAAATATTCAAATGAATGTTGGGTCTTGGGATGGACATAATGTGCGGTTTATCTTTAATAACTCAACAAGTGGAAATGACTACAATTTTAGTTACCACTCCAATGCAGATGAAGTCTACTTTACTTTTAGTGGGAATAAGAATTATGACCTCATGTGGTTTGTGATGGCTTCCACGGGAAAGCTAGATCAGTATTATATGGTGGATGGGAAGATTTCTTCTGTGAGTAATGCTGTGTGTGATCCAACTGGGAGCTGCTTGAATTCCCTACCGTCTATGTGTAAGAATGGTGATAGTTTTTCACAGGTGAAGGGTTCACTGCCTTCTACTTTTAATAGTGGTTCTATAAATCTGGGGACTACAGATTGTGAATCTTGGTGCCGGAGCAATTGTTCTTGTTCATCATTTGCTTCACCTCAGAATGATCAAGTATGCCAACTTTATTACGGGAGTACACATGATTTATTGAAGATCATAGAGAAGGGGACAGGAATTATATACATCCGCGGTGGTGCTCCAAGTGACGGTAAGAACTGGAAACTCTGGTTGGCTACTGTCCTTCCTTTGGCGTCCCTCTTGGTTCTTATTCCAACCTCCTTATGCTGCTATCTGCGCTGGAGAAGAAGACGTAAAGCAGAGGATCCAGTAACCAGACGGGAAGGAATTATCAATTTGGATCTGGTGAGTTTATTCCAAATGGGAACTAATGAGTCACAACTTCGTCATGATGAAGTCAGAGGTACAAATAACCTGGAATTAGGCAGACAGAAGGATCAAGAACTGCCCTTGATTAGCTTTGCTACCATACAGACTGCAACACATAACTTTGCGGAGGCCAATAAACTTGGGGAAGGAGGATTTGGGCCTGTCTATAAGGGGAAGTTACCAGTAGAAGGACCTGTAATTGCAGTGAAAAGACTGTCCAAAATTTCCCGTCAAGGGTTGGGGGAGTTCAAAAATGAAGTCTCAGTAATTTGTAAGCTTCAACACAGGAACTTGGTTAGGCTTTTTGGATGCTGCATTGAAGCAGAAGAAAGTATACTTGTTTATGAGTACATGCCCAACAAAAGCCTGGATTTTTTCATTTTTGACTCAACCAAACGGGTACTTTTGGATTGGAGAAAGCGCATAAACATTATTGAAGGCATTGCTCAAGGACTTCAATATCTTCACAAATACTCAAGATTAAGGATCATTCACCGTGATTTAAAGCCCAGCAATATCTTGTTGGACAGTGACATGAACCCAAAAATTTCTGATTTTGGCATGGCAAGAATTTTTGGGGATAATGACTCTAAGGGGAAAACAAACAGGGTTGTTGGCACATTTGGTTACATGTCTCCTGAGTATGCCATGGACGGGCTCTTTTCTGAAAAGTCAGATGTGTTCAGCTTTGGGGTGATCTTATTAGAGATCATAAGTGCCAAGAAGAACATTGCCTTCTTTGAGGCAGATCACTCTCTGAACTTACTTGGCAAAGCTTGGAATCTGTGGAAAGAAGGCAATAGCATGGAGTTGATGGATCCAACACTCGGTGGTTCTTGTTCAAGCAGTGAAGCTATCAGATGCACTCAAATTGGTCTTCTTTGTGTGCAAGAAAGAGCTACTGATCGACCAACAATGTCAGATGTTATTTCTATGCTAAGCAATCAGTCATGTCCTCTGCCGCTTCCCAAACAGCCTGCATTTTTGAGTCAGTTAAGTTCAACTGATGCAGATTCATCTTCAAGAAGGCACAGACATTACTCTCGAAATGATATGACCATTTCAGAAGAACATGGCAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

805

Amino Acids

89.98

Weight (kDa)

8.38

Isoelectric Point (pI)

46.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	80 - 174	7.5e-26	D-mannose binding lectin
Pkinase	PF00069	487 - 690	7.9e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	490 - 757	1e-45	Protein tyrosine and serine/threonine kinase
DUF3403	PF11883	764 - 805	1e-06	Domain of unknown function (DUF3403)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010717)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26290
fragaria_vesca	FvH4_2g30840 FvH4_2g30840
malus_domestica	MD08G1073100.v1.1 MD15G1048500.v1.1
prunus_persica	Prupe.1G402700_v2.0.a1
pyrus_communis	pycom15g04730
rosa_chinensis	RchiOBHm_Chr6g0312011
rosa_laevigata	RLG00000010361
rosa_roxburghii	Rroxscaffold_7G00157140
rosa_rugosa	Rorug06G0392000 Rorug06G0392000 Rorug06G0392100 Rorug06G0392100 Rorug06G0392200
rosa_samantha	Rh6AG508600 Rh6BG519900 Rh6CG525800 Rh6DG511300
rosa_wichuraiana	Rw6G044290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2403
AccB1I	GGYRCC	1 cut(s)	1008
AccI	GTMKAC	2 cut(s)	747, 1669
AccII	CGCG	2 cut(s)	534, 1137
AciI	CCGC	8 cut(s)	256, 325, 384, 676, 1135, 1137, 1460, 2297
AclWI	GGATC	9 cut(s)	608, 866, 1265, 1278, 1314, 1410, 1829, 2147, 2160
AcoI	YGGCCR	1 cut(s)	369
AcsI	RAATTY	6 cut(s)	210, 406, 892, 1557, 1881, 1905
AcuI	CTGAAG	2 cut(s)	264, 602
AcyI	GRCGYC	1 cut(s)	1199
AdeI	CACNNNGTG	1 cut(s)	2165
AfaI	GTAC	6 cut(s)	352, 436, 1084, 1372, 1685, 1737
AfiI	CCNNNNNNNGG	8 cut(s)	572, 597, 1154, 1195, 1523, 1569, 1989, 2162
AflIII	ACRYGT	1 cut(s)	1965
AjnI	CCWGG	4 cut(s)	138, 481, 1380, 1701
AjuI	GAANNNNNNNTTGG	4 cut(s)	1160, 1192, 1473, 1505
AloI	GAACNNNNNNTCC	2 cut(s)	1006, 1038
Alw21I	GWGCWC	1 cut(s)	1147
Alw26I	GTCTC	4 cut(s)	108, 507, 1600, 1974
AlwI	GGATC	9 cut(s)	608, 866, 1265, 1278, 1314, 1410, 1829, 2147, 2160
AoxI	GGCC	3 cut(s)	369, 1464, 1493
ApeKI	GCWGC	3 cut(s)	885, 1233, 1647
ApoI	RAATTY	6 cut(s)	210, 406, 892, 1557, 1881, 1905
ArsI	GACNNNNNNTTYG	2 cut(s)	1578, 1610
AspLEI	GCGC	3 cut(s)	536, 1245, 1758
AspS9I	GGNCC	2 cut(s)	1493, 1526
AsuC2I	CCSGG	1 cut(s)	111
AsuHPI	GGTGA	6 cut(s)	932, 949, 1035, 1324, 1820, 2041
AvaII	GGWCC	1 cut(s)	1526
BalI	TGGCCA	1 cut(s)	371
BamHI	GGATCC	2 cut(s)	1270, 2152
BanI	GGYRCC	1 cut(s)	1008
BanII	GRGCYC	1 cut(s)	1995
BarI	GAAGNNNNNNTAC	2 cut(s)	1653, 1685
BauI	CACGAG	1 cut(s)	10
BbsI	GAAGAC	4 cut(s)	32, 281, 1261, 2204
Bbv12I	GWGCWC	1 cut(s)	1147
BbvI	GCAGC	3 cut(s)	872, 1220, 1634
BccI	CCATC	4 cut(s)	656, 790, 830, 2143
BceAI	ACGGC	1 cut(s)	312
BciT130I	CCWGG	4 cut(s)	140, 483, 1382, 1703
BclI	TGATCA	1 cut(s)	1054
BcnI	CCSGG	1 cut(s)	111
BcoDI	GTCTC	4 cut(s)	108, 507, 1600, 1974
BfaI	CTAG	4 cut(s)	6, 206, 344, 815
BfmI	CTRYAG	1 cut(s)	990
BfuAI	ACCTGC	1 cut(s)	2403
BisI	GCNGC	4 cut(s)	886, 1234, 1648, 2297
BlpI	GCTNAGC	1 cut(s)	2273
BlsI	GCNGC	4 cut(s)	887, 1235, 1649, 2298
Bme1390I	CCNGG	5 cut(s)	111, 140, 483, 1382, 1703
Bme18I	GGWCC	1 cut(s)	1526
BmgT120I	GGNCC	2 cut(s)	1493, 1526
BmiI	GGNNCC	3 cut(s)	1010, 1272, 2154
BmrFI	CCNGG	5 cut(s)	111, 140, 483, 1382, 1703
BmrI	ACTGGG	1 cut(s)	888
BmsI	GCATC	4 cut(s)	217, 1634, 2186, 2332
BmuI	ACTGGG	1 cut(s)	888
BoxI	GACNNNNGTC	1 cut(s)	327
BpiI	GAAGAC	4 cut(s)	32, 281, 1261, 2204
BpmI	CTGGAG	1 cut(s)	1267
Bpu1102I	GCTNAGC	1 cut(s)	2273
BpuEI	CTTGAG	2 cut(s)	1767, 1795
BpuMI	CCSGG	1 cut(s)	111
BsaBI	GATNNNNATC	1 cut(s)	474
BsaHI	GRCGYC	1 cut(s)	1199
BsaI	GGTCTC	1 cut(s)	507
BsaJI	CCNNGG	6 cut(s)	138, 366, 482, 804, 1135, 1983
BsaXI	ACNNNNNCTCC	2 cut(s)	1006, 1036
Bsc4I	CCNNNNNNNGG	8 cut(s)	572, 597, 1154, 1195, 1523, 1569, 1989, 2162
Bse1I	ACTGG	4 cut(s)	883, 1169, 1274, 1517
Bse3DI	GCAATG	2 cut(s)	1776, 2064
Bse8I	GATNNNNATC	1 cut(s)	474
BseBI	CCWGG	4 cut(s)	140, 483, 1382, 1703
BseDI	CCNNGG	6 cut(s)	138, 366, 482, 804, 1135, 1983
BseGI	GGATG	5 cut(s)	492, 667, 841, 1131, 1649
BseJI	GATNNNNATC	1 cut(s)	474
BseLI	CCNNNNNNNGG	8 cut(s)	572, 597, 1154, 1195, 1523, 1569, 1989, 2162
BseMI	GCAATG	2 cut(s)	1776, 2064
BseMII	CTCAG	4 cut(s)	518, 1061, 1611, 1965
BseNI	ACTGG	4 cut(s)	883, 1169, 1274, 1517
BseXI	GCAGC	3 cut(s)	872, 1220, 1634
BseYI	CCCAGC	1 cut(s)	1844
Bsh1236I	CGCG	2 cut(s)	534, 1137
BshFI	GGCC	3 cut(s)	371, 1466, 1495
BshNI	GGYRCC	1 cut(s)	1008
BsiHKAI	GWGCWC	1 cut(s)	1147
BsiSI	CCGG	2 cut(s)	111, 1012
BslFI	GGGAC	3 cut(s)	1000, 1129, 1186
BslI	CCNNNNNNNGG	8 cut(s)	572, 597, 1154, 1195, 1523, 1569, 1989, 2162
BsmAI	GTCTC	4 cut(s)	108, 507, 1600, 1974
BsmFI	GGGAC	3 cut(s)	1000, 1129, 1186
BsnI	GGCC	3 cut(s)	371, 1466, 1495
Bso31I	GGTCTC	1 cut(s)	507
Bsp1286I	GDGCHC	2 cut(s)	1147, 1995
Bsp1720I	GCTNAGC	1 cut(s)	2273
Bsp19I	CCATGG	2 cut(s)	366, 1983
BspACI	CCGC	8 cut(s)	256, 325, 384, 676, 1135, 1137, 1460, 2297
BspANI	GGCC	3 cut(s)	371, 1466, 1495
BspCNI	CTCAG	4 cut(s)	517, 1060, 1610, 1966
BspFNI	CGCG	2 cut(s)	534, 1137
BspHI	TCATGA	1 cut(s)	1354
BspLI	GGNNCC	3 cut(s)	1010, 1272, 2154
BspMI	ACCTGC	1 cut(s)	2403
BspPI	GGATC	9 cut(s)	608, 866, 1265, 1278, 1314, 1410, 1829, 2147, 2160
BspT107I	GGYRCC	1 cut(s)	1008
BspTNI	GGTCTC	1 cut(s)	507
BsrDI	GCAATG	2 cut(s)	1776, 2064
BsrI	ACTGG	4 cut(s)	883, 1169, 1274, 1517
BssECI	CCNNGG	6 cut(s)	138, 366, 482, 804, 1135, 1983
BssNAI	GTATAC	1 cut(s)	1670
BssNI	GRCGYC	1 cut(s)	1199
BssSI	CACGAG	1 cut(s)	10
BssT1I	CCWWGG	2 cut(s)	366, 1983
Bst1107I	GTATAC	1 cut(s)	1670
Bst2BI	CACGAG	1 cut(s)	10
Bst2UI	CCWGG	4 cut(s)	140, 483, 1382, 1703
Bst4CI	ACNGT	8 cut(s)	127, 515, 903, 1157, 1186, 1551, 1832, 1865
BstACI	GRCGYC	1 cut(s)	1199
BstC8I	GCNNGC	1 cut(s)	2313
BstDEI	CTNAG	6 cut(s)	504, 1047, 1597, 1926, 1974, 2273
BstDSI	CCRYGG	4 cut(s)	366, 804, 1135, 1983
BstEII	GGTNACC	1 cut(s)	251
BstF5I	GGATG	5 cut(s)	492, 667, 841, 1131, 1649
BstFNI	CGCG	2 cut(s)	534, 1137
BstHHI	GCGC	3 cut(s)	536, 1245, 1758
BstMAI	GTCTC	4 cut(s)	108, 507, 1600, 1974
BstMWI	GCNNNNNNNGC	2 cut(s)	377, 1242
BstNI	CCWGG	4 cut(s)	140, 483, 1382, 1703
BstNSI	RCATGY	2 cut(s)	1690, 1969
BstPAI	GACNNNNGTC	1 cut(s)	327
BstPI	GGTNACC	1 cut(s)	251
BstSCI	CCNGG	5 cut(s)	109, 138, 481, 1380, 1701
BstSFI	CTRYAG	1 cut(s)	990
BstUI	CGCG	2 cut(s)	534, 1137
BstV1I	GCAGC	3 cut(s)	872, 1220, 1634
BstV2I	GAAGAC	4 cut(s)	32, 281, 1261, 2204
BstX2I	RGATCY	3 cut(s)	1270, 1306, 2152
BstYI	RGATCY	3 cut(s)	1270, 1306, 2152
BstZ17I	GTATAC	1 cut(s)	1670
BsuRI	GGCC	3 cut(s)	371, 1466, 1495
BtgI	CCRYGG	4 cut(s)	366, 804, 1135, 1983
BtsCI	GGATG	5 cut(s)	492, 667, 841, 1131, 1649
BtsI	GCAGTG	3 cut(s)	947, 1545, 2188
BtsIMutI	CAGTG	4 cut(s)	947, 1545, 1870, 2188
BveI	ACCTGC	1 cut(s)	2403
Cac8I	GCNNGC	1 cut(s)	2313
CciI	TCATGA	1 cut(s)	1354
CfoI	GCGC	3 cut(s)	536, 1245, 1758
Cfr13I	GGNCC	2 cut(s)	1493, 1526
Cfr42I	CCGCGG	1 cut(s)	1138
CseI	GACGC	2 cut(s)	284, 1188
Csp6I	GTAC	6 cut(s)	351, 435, 1083, 1371, 1684, 1736
CviQI	GTAC	6 cut(s)	351, 435, 1083, 1371, 1684, 1736
DdeI	CTNAG	6 cut(s)	504, 1047, 1597, 1926, 1974, 2273
DraI	TTTAAA	2 cut(s)	610, 1839
DraIII	CACNNNGTG	1 cut(s)	2165
EaeI	YGGCCR	1 cut(s)	369
Eco130I	CCWWGG	2 cut(s)	366, 1983
Eco24I	GRGCYC	1 cut(s)	1995
Eco31I	GGTCTC	1 cut(s)	507
Eco47I	GGWCC	1 cut(s)	1526
Eco57I	CTGAAG	2 cut(s)	264, 602
Eco91I	GGTNACC	1 cut(s)	251
EcoO109I	RGGNCCY	1 cut(s)	1526
EcoO65I	GGTNACC	1 cut(s)	251
EcoRI	GAATTC	1 cut(s)	892
EcoRII	CCWGG	4 cut(s)	138, 481, 1380, 1701
EcoT14I	CCWWGG	2 cut(s)	366, 1983
EcoT38I	GRGCYC	1 cut(s)	1995
ErhI	CCWWGG	2 cut(s)	366, 1983
FaqI	GGGAC	3 cut(s)	1000, 1129, 1186
FbaI	TGATCA	1 cut(s)	1054
FblI	GTMKAC	2 cut(s)	747, 1669
Fnu4HI	GCNGC	4 cut(s)	886, 1234, 1648, 2297
FokI	GGATG	5 cut(s)	499, 674, 848, 1118, 1656
FriOI	GRGCYC	1 cut(s)	1995
Fsp4HI	GCNGC	4 cut(s)	886, 1234, 1648, 2297
FspBI	CTAG	4 cut(s)	6, 206, 344, 815
GlaI	GCGC	3 cut(s)	535, 1244, 1757
GluI	GCNGC	4 cut(s)	886, 1234, 1648, 2297
GsaI	CCCAGC	1 cut(s)	1848
GsuI	CTGGAG	1 cut(s)	1267
HaeIII	GGCC	3 cut(s)	371, 1466, 1495
HapII	CCGG	2 cut(s)	111, 1012
HgaI	GACGC	2 cut(s)	284, 1188
HhaI	GCGC	3 cut(s)	536, 1245, 1758
Hin1I	GRCGYC	1 cut(s)	1199
Hin6I	GCGC	3 cut(s)	534, 1243, 1756
HinP1I	GCGC	3 cut(s)	534, 1243, 1756
HincII	GTYRAC	1 cut(s)	553
HindII	GTYRAC	1 cut(s)	553
HindIII	AAGCTT	3 cut(s)	614, 1610, 2109
HinfI	GANTC	9 cut(s)	307, 398, 1001, 1340, 1721, 1922, 2116, 2323, 2348
HpaII	CCGG	2 cut(s)	111, 1012
HphI	GGTGA	6 cut(s)	932, 949, 1035, 1324, 1820, 2041
Hpy166II	GTNNAC	5 cut(s)	553, 748, 947, 1085, 1670
Hpy188III	TCNNGA	9 cut(s)	282, 395, 402, 1355, 1406, 1812, 1973, 2358, 2379
Hpy8I	GTNNAC	5 cut(s)	553, 748, 947, 1085, 1670
HpyCH4III	ACNGT	8 cut(s)	127, 515, 903, 1157, 1186, 1551, 1832, 1865
HpyCH4IV	ACGT	1 cut(s)	1258
HpyF10VI	GCNNNNNNNGC	2 cut(s)	377, 1242
HpyF3I	CTNAG	6 cut(s)	504, 1047, 1597, 1926, 1974, 2273
HpySE526I	ACGT	1 cut(s)	1258
Hsp92I	GRCGYC	1 cut(s)	1199
HspAI	GCGC	3 cut(s)	534, 1243, 1756
Ksp22I	TGATCA	1 cut(s)	1054
KspI	CCGCGG	1 cut(s)	1138
LmnI	GCTCC	3 cut(s)	882, 1014, 1150
Lsp1109I	GCAGC	3 cut(s)	872, 1220, 1634
LweI	GCATC	4 cut(s)	217, 1634, 2186, 2332
MaeI	CTAG	4 cut(s)	6, 206, 344, 815
MaeII	ACGT	1 cut(s)	1258
MfeI	CAATTG	1 cut(s)	1018
MflI	RGATCY	3 cut(s)	1270, 1306, 2152
MhlI	GDGCHC	2 cut(s)	1147, 1995
MlsI	TGGCCA	1 cut(s)	371
MluNI	TGGCCA	1 cut(s)	371
MlyI	GAGTC	5 cut(s)	392, 1349, 1715, 1916, 2332
MmeI	TCCRAC	4 cut(s)	899, 1244, 1839, 2180
Mox20I	TGGCCA	1 cut(s)	371
MscI	TGGCCA	1 cut(s)	371
MseI	TTAA	9 cut(s)	417, 510, 587, 609, 687, 963, 1817, 1838, 2330
MslI	CAYNNNNRTG	1 cut(s)	732
Msp20I	TGGCCA	1 cut(s)	371
MspA1I	CMGCKG	2 cut(s)	149, 1137
MspI	CCGG	2 cut(s)	111, 1012
MspR9I	CCNGG	5 cut(s)	111, 140, 483, 1382, 1703
MunI	CAATTG	1 cut(s)	1018
MvaI	CCWGG	4 cut(s)	140, 483, 1382, 1703
MvnI	CGCG	2 cut(s)	534, 1137
MwoI	GCNNNNNNNGC	2 cut(s)	377, 1242
NciI	CCSGG	1 cut(s)	111
NcoI	CCATGG	2 cut(s)	366, 1983
NlaIV	GGNNCC	3 cut(s)	1010, 1272, 2154
NmuCI	GTSAC	4 cut(s)	182, 1151, 1341, 1865
NspI	RCATGY	2 cut(s)	1690, 1969
PagI	TCATGA	1 cut(s)	1354
PciI	ACATGT	1 cut(s)	1965
PfeI	GAWTC	4 cut(s)	307, 1001, 2116, 2348
PkrI	GCNGC	4 cut(s)	887, 1235, 1649, 2298
PleI	GAGTC	5 cut(s)	392, 1348, 1715, 1916, 2331
PpsI	GAGTC	5 cut(s)	392, 1348, 1715, 1916, 2331
PpuMI	RGGWCCY	1 cut(s)	1526
PscI	ACATGT	1 cut(s)	1965
PshAI	GACNNNNGTC	1 cut(s)	327
Psp5II	RGGWCCY	1 cut(s)	1526
Psp6I	CCWGG	4 cut(s)	138, 481, 1380, 1701
PspEI	GGTNACC	1 cut(s)	251
PspFI	CCCAGC	1 cut(s)	1844
PspGI	CCWGG	4 cut(s)	138, 481, 1380, 1701
PspN4I	GGNNCC	3 cut(s)	1010, 1272, 2154
PspPI	GGNCC	2 cut(s)	1493, 1526
PspPPI	RGGWCCY	1 cut(s)	1526
PsuI	RGATCY	3 cut(s)	1270, 1306, 2152
PvuII	CAGCTG	1 cut(s)	149
RsaI	GTAC	6 cut(s)	352, 436, 1084, 1372, 1685, 1737
RsaNI	GTAC	6 cut(s)	351, 435, 1083, 1371, 1684, 1736
RseI	CAYNNNNRTG	1 cut(s)	732
SacII	CCGCGG	1 cut(s)	1138
SaqAI	TTAA	9 cut(s)	417, 510, 587, 609, 687, 963, 1817, 1838, 2330
SatI	GCNGC	4 cut(s)	886, 1234, 1648, 2297
Sau96I	GGNCC	2 cut(s)	1493, 1526
SchI	GAGTC	5 cut(s)	392, 1349, 1715, 1916, 2332
ScrFI	CCNGG	5 cut(s)	111, 140, 483, 1382, 1703
SduI	GDGCHC	2 cut(s)	1147, 1995
SfaNI	GCATC	4 cut(s)	217, 1634, 2186, 2332
SfcI	CTRYAG	1 cut(s)	990
Sfr303I	CCGCGG	1 cut(s)	1138
SgrBI	CCGCGG	1 cut(s)	1138
SinI	GGWCC	1 cut(s)	1526
SmiMI	CAYNNNNRTG	1 cut(s)	732
SmlI	CTYRAG	2 cut(s)	1782, 1810
SmoI	CTYRAG	2 cut(s)	1782, 1810
SsiI	CCGC	8 cut(s)	256, 325, 384, 676, 1135, 1137, 1460, 2297
SspI	AATATT	1 cut(s)	637
SspMI	CTAG	4 cut(s)	6, 206, 344, 815
StyD4I	CCNGG	5 cut(s)	109, 138, 481, 1380, 1701
StyI	CCWWGG	2 cut(s)	366, 1983
TaaI	ACNGT	8 cut(s)	127, 515, 903, 1157, 1186, 1551, 1832, 1865
TaiI	ACGT	1 cut(s)	1261
TaqI	TCGA	3 cut(s)	162, 2242, 2380
TatI	WGTACW	3 cut(s)	350, 1082, 1683
TauI	GCSGC	1 cut(s)	2299
TfiI	GAWTC	4 cut(s)	307, 1001, 2116, 2348
Tru1I	TTAA	9 cut(s)	417, 510, 587, 609, 687, 963, 1817, 1838, 2330
Tru9I	TTAA	9 cut(s)	417, 510, 587, 609, 687, 963, 1817, 1838, 2330
TscAI	CASTG	4 cut(s)	954, 1545, 1870, 2188
TseFI	GTSAC	4 cut(s)	182, 1151, 1341, 1865
TseI	GCWGC	3 cut(s)	885, 1233, 1647
Tsp45I	GTSAC	4 cut(s)	182, 1151, 1341, 1865
TspRI	CASTG	4 cut(s)	954, 1545, 1870, 2188
VpaK11BI	GGWCC	1 cut(s)	1526
XapI	RAATTY	6 cut(s)	210, 406, 892, 1557, 1881, 1905
XceI	RCATGY	2 cut(s)	1690, 1969
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1699
XmiI	GTMKAC	2 cut(s)	747, 1669
XspI	CTAG	4 cut(s)	6, 206, 344, 815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.