MD08G1097300.v1.1

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0018098
Physical Location & Seq
Forward (+)
8192989 .. 8194635
1647 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1097300.v1.1.491

Sequence Viewer

Length: 1647 bp
ATGACGAGAGTGTTAGCAATATACATTACTCTCGCATTTAGCCTCTTTCTCTGTGGCACCGAGTGCAACATCTCATTCTCCACAAGTGGAGCTACAAGCAACTCGTACAACACGTTCATAAAAGCACTGCGAGCCCAACTCACAAATGGAGCGACCGCAATATATGATATACCTGTCCTGAACCCATCTGTGCCGGACTCACAACGCTTCCTCTTGGTTGATCTCTCTAACAATGGCAACAACACCATAACCGTGGCAATTGACGTGGTGAATGCTTCTGTTGTGGCTTATCGCGCACGTGCAGCTAGACCTTACTTTCTTGCTGACGCCCCTGATGAAGCTTTGGACATTTTATTCAACGATACCAGAGGGTTTTTTCTTCCATTCACAAGCAACTACGTTGACCTTGAGAAAGCCGCAGAGAAATCCAGGGACAAAATCCCATTGGGACTCACTCCACTACATAACGCCATCACCAGCTTGTGGAATCATGAGTCGGAAGAGGCTGCAGTGTCACTACTTGTGATCATTCAAACGGTCTTTGAAGCAGCAAGGTTCAGGGTCATTGAGCAGCGAGTTCGCAACAGTATAAGCTCCAAAGCTAACTTTATACCAGACCCTGCAATGCTGAGCTTGGAGAACAATTGGTTGGCTATCTCTTGGGAGACTCAACATGCACTTAACGGAGTCTTCAGTAAGTCCATTCAACTTCGCTCTACCAATAACAATCTTTTCCTTGTAGACAGTGTTAGTTCAAGCATCATGGCCGGTGTCGCATTCTTATTCTACAACTGTGTGACCTTTCCCAACATAATCAAAATGCCTGTTAACGTTGTGATGGGCAAGGAAATTGACAATGAAATATGTGCCGTACAAAACCGCACAACACACATAAGCGGTCTAGAAGGATTGTGTGTTGACGTGAAGAATGGTCTCGACAGCGATGGGAATCTAGTCCAAATTTGGCCATGTGGGCAACAGCGCAATCAGAAGTGGACATTCCAGCCAGATGAGACGATCCGGTCAATGGAAAAATGCATGACTGCATATAGTACTTCTAGCCCTGAAAATTATGTCATGATATACAACTGTACTACGGCTGTTCCAGAAGCAACTAAGTGGGCATTATCTACCGACGGCACAATCACACATCGTCGCTCCGGGCTCGTTCTCACTGCCCACGAAGCTACGCGGGGTACCACCCTTACTATAGCGACCAATAGCCATTCACCTAAGCAAGGTTGGAGAGTGGCAGATGATGTGGAACCCACAGTGACTTCCATAATTGGGTATAATGACATGTGCCTTACTGCCAACGACGATAAGAGTCGAGTATGGATGGAGTATTGTGTGCCCAGCAAGAATCAACAACAATGGGCACTCTATAGTGAAGGCACTATCCGAGTAAATAGCGATCGCACCCTATGTGTGACATCCAATGGTCACAACTCATCAAATGTAATCATCATCCTCAAATGTGAATTAAAAAGGGGCGACCAGCGCTGGGTGTTCAAGACAGACGGTTCCATTTTAAACCCTAATGCTGAATTGGTTATGGATGTGAAAAACAGCGATGTGTATCTGCGACAGATCGTTTTGTATCCATACTATGGGACACCCAACCAGCAATGGCTGCCGTTCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RIP Ricin_B_lectin

Protein Analysis

549

Amino Acids

61.08

Weight (kDa)

5.71

Isoelectric Point (pI)

33.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RIP PF00161 32 - 220 1.6e-40 Ribosome inactivating protein
Ricin_B_lectin PF00652 295 - 415 7.8e-24 Ricin-type beta-trefoil lectin domain
Ricin_B_lectin PF00652 426 - 544 8.4e-23 Ricin-type beta-trefoil lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1021
Acc65I GGTACC 1 cut(s) 1196
AccB1I GGYRCC 2 cut(s) 56, 1196
AccB7I CCANNNNNTGG 2 cut(s) 483, 1610
AccI GTMKAC 1 cut(s) 741
AccII CGCG 2 cut(s) 294, 1192
AciI CCGC 5 cut(s) 156, 417, 880, 897, 1192
AclI AACGTT 1 cut(s) 831
AclWI GGATC 1 cut(s) 1012
AcoI YGGCCR 2 cut(s) 765, 965
AcsI RAATTY 1 cut(s) 960
AcuI CTGAAG 1 cut(s) 676
AcvI CACGTG 1 cut(s) 299
AcyI GRCGYC 1 cut(s) 327
AdeI CACNNNGTG 1 cut(s) 63
AfaI GTAC 5 cut(s) 107, 873, 1054, 1093, 1198
AfeI AGCGCT 1 cut(s) 1502
AfiI CCNNNNNNNGG 6 cut(s) 483, 1027, 1238, 1287, 1504, 1610
AflIII ACRYGT 2 cut(s) 111, 1299
AgsI TTSAA 6 cut(s) 358, 533, 545, 707, 756, 1513
AjiI CACGTC 2 cut(s) 265, 922
AjnI CCWGG 1 cut(s) 428
AjuI GAANNNNNNNTTGG 2 cut(s) 632, 664
AluBI AGCT 8 cut(s) 92, 305, 341, 480, 594, 602, 633, 1187
AluI AGCT 8 cut(s) 92, 305, 341, 480, 594, 602, 633, 1187
Alw26I GTCTC 3 cut(s) 659, 938, 1007
AlwI GGATC 1 cut(s) 1012
AlwNI CAGNNNCTG 1 cut(s) 620
Aor51HI AGCGCT 1 cut(s) 1502
AoxI GGCC 2 cut(s) 765, 965
ApeKI GCWGC 5 cut(s) 302, 506, 548, 571, 1633
ApoI RAATTY 1 cut(s) 960
AsiSI GCGATCGC 1 cut(s) 1417
Asp718I GGTACC 1 cut(s) 1196
AspLEI GCGC 3 cut(s) 296, 984, 1503
AsuC2I CCSGG 1 cut(s) 1162
AsuHPI GGTGA 3 cut(s) 280, 466, 1221
BaeGI GKGCMC 2 cut(s) 1356, 1381
BalI TGGCCA 1 cut(s) 967
BanI GGYRCC 2 cut(s) 56, 1196
BanII GRGCYC 2 cut(s) 136, 1167
BbrPI CACGTG 1 cut(s) 299
BbsI GAAGAC 1 cut(s) 682
BbvI GCAGC 5 cut(s) 314, 493, 560, 583, 1620
BccI CCATC 5 cut(s) 193, 479, 832, 938, 1333
BceAI ACGGC 4 cut(s) 854, 1113, 1153, 1621
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 1 cut(s) 430
BciVI GTATCC 1 cut(s) 1611
BclI TGATCA 1 cut(s) 525
BcnI CCSGG 1 cut(s) 1162
BcoDI GTCTC 3 cut(s) 659, 938, 1007
BfaI CTAG 4 cut(s) 306, 902, 953, 1059
BfmI CTRYAG 3 cut(s) 507, 1209, 1384
BfoI RGCGCY 1 cut(s) 1504
BfuI GTATCC 1 cut(s) 1611
BglI GCCNNNNNGGC 1 cut(s) 973
BisI GCNGC 6 cut(s) 303, 417, 507, 549, 572, 1634
BlpI GCTNAGC 1 cut(s) 629
BlsI GCNGC 6 cut(s) 304, 418, 508, 550, 573, 1635
BmcAI AGTACT 1 cut(s) 1054
Bme1390I CCNGG 2 cut(s) 430, 1162
BmgBI CACGTC 2 cut(s) 265, 922
BmiI GGNNCC 4 cut(s) 58, 1198, 1266, 1525
BmrFI CCNGG 2 cut(s) 430, 1162
BmsI GCATC 1 cut(s) 768
BpiI GAAGAC 1 cut(s) 682
BplI GAGNNNNNCTC 2 cut(s) 123, 155
Bpu10I CCTNAGC 1 cut(s) 1233
Bpu1102I GCTNAGC 1 cut(s) 629
BpuEI CTTGAG 1 cut(s) 428
BpuMI CCSGG 1 cut(s) 1162
BsaAI YACGTR 1 cut(s) 299
BsaBI GATNNNNATC 2 cut(s) 948, 1578
BsaHI GRCGYC 1 cut(s) 327
BsaI GGTCTC 1 cut(s) 938
BsaJI CCNNGG 2 cut(s) 252, 429
BsaWI WCCGGW 1 cut(s) 1020
Bsc4I CCNNNNNNNGG 6 cut(s) 483, 1027, 1238, 1287, 1504, 1610
Bse118I RCCGGY 1 cut(s) 767
Bse3DI GCAATG 2 cut(s) 630, 1634
Bse8I GATNNNNATC 2 cut(s) 948, 1578
BseBI CCWGG 1 cut(s) 430
BseDI CCNNGG 2 cut(s) 252, 429
BseGI GGATG 4 cut(s) 1344, 1433, 1467, 1564
BseJI GATNNNNATC 2 cut(s) 948, 1578
BseLI CCNNNNNNNGG 6 cut(s) 483, 1027, 1238, 1287, 1504, 1610
BseMI GCAATG 2 cut(s) 630, 1634
BseMII CTCAG 1 cut(s) 620
BseSI GKGCMC 2 cut(s) 1356, 1381
BseXI GCAGC 5 cut(s) 314, 493, 560, 583, 1620
BseYI CCCAGC 2 cut(s) 1355, 1503
BsgI GTGCAG 1 cut(s) 321
Bsh1236I CGCG 2 cut(s) 294, 1192
Bsh1285I CGRYCG 2 cut(s) 156, 1417
BshFI GGCC 2 cut(s) 767, 967
BshNI GGYRCC 2 cut(s) 56, 1196
BsiEI CGRYCG 2 cut(s) 156, 1417
BsiSI CCGG 4 cut(s) 194, 768, 1021, 1161
BslFI GGGAC 3 cut(s) 446, 462, 1627
BslI CCNNNNNNNGG 6 cut(s) 483, 1027, 1238, 1287, 1504, 1610
BsmAI GTCTC 3 cut(s) 659, 938, 1007
BsmBI CGTCTC 1 cut(s) 1007
BsmFI GGGAC 3 cut(s) 446, 462, 1627
BsmI GAATGC 2 cut(s) 277, 776
BsnI GGCC 2 cut(s) 767, 967
Bso31I GGTCTC 1 cut(s) 938
Bsp1286I GDGCHC 4 cut(s) 136, 1167, 1356, 1381
Bsp143I GATC 5 cut(s) 220, 525, 1017, 1414, 1590
Bsp1720I GCTNAGC 1 cut(s) 629
BspACI CCGC 5 cut(s) 156, 417, 880, 897, 1192
BspANI GGCC 2 cut(s) 767, 967
BspCNI CTCAG 1 cut(s) 621
BspFNI CGCG 2 cut(s) 294, 1192
BspHI TCATGA 2 cut(s) 490, 1077
BspLI GGNNCC 4 cut(s) 58, 1198, 1266, 1525
BspMAI CTGCAG 1 cut(s) 511
BspPI GGATC 1 cut(s) 1012
BspT107I GGYRCC 2 cut(s) 56, 1196
BspTNI GGTCTC 1 cut(s) 938
BsrDI GCAATG 2 cut(s) 630, 1634
BsrFI RCCGGY 1 cut(s) 767
BssAI RCCGGY 1 cut(s) 767
BssECI CCNNGG 2 cut(s) 252, 429
BssMI GATC 5 cut(s) 220, 525, 1017, 1414, 1590
BssNI GRCGYC 1 cut(s) 327
Bst2UI CCWGG 1 cut(s) 430
Bst4CI ACNGT 8 cut(s) 253, 538, 587, 746, 794, 1091, 1273, 1523
Bst6I CTCTTC 1 cut(s) 495
BstACI GRCGYC 1 cut(s) 327
BstAPI GCANNNNNTGC 2 cut(s) 63, 1633
BstBAI YACGTR 1 cut(s) 299
BstC8I GCNNGC 1 cut(s) 132
BstDEI CTNAG 3 cut(s) 629, 1116, 1233
BstDSI CCRYGG 1 cut(s) 252
BstENI CCTNNNNNAGG 1 cut(s) 1236
BstF5I GGATG 4 cut(s) 1344, 1433, 1467, 1564
BstFNI CGCG 2 cut(s) 294, 1192
BstH2I RGCGCY 1 cut(s) 1504
BstHHI GCGC 3 cut(s) 296, 984, 1503
BstKTI GATC 5 cut(s) 223, 528, 1020, 1417, 1593
BstMAI GTCTC 3 cut(s) 659, 938, 1007
BstMBI GATC 5 cut(s) 220, 525, 1017, 1414, 1590
BstMCI CGRYCG 2 cut(s) 156, 1417
BstMWI GCNNNNNNNGC 9 cut(s) 63, 131, 293, 302, 773, 973, 1184, 1500, 1633
BstNI CCWGG 1 cut(s) 430
BstNSI RCATGY 2 cut(s) 677, 1303
BstSCI CCNGG 2 cut(s) 428, 1160
BstSFI CTRYAG 3 cut(s) 507, 1209, 1384
BstSLI GKGCMC 2 cut(s) 1356, 1381
BstUI CGCG 2 cut(s) 294, 1192
BstV1I GCAGC 5 cut(s) 314, 493, 560, 583, 1620
BstV2I GAAGAC 1 cut(s) 682
BstXI CCANNNNNNTGG 1 cut(s) 253
BsuI GTATCC 1 cut(s) 1611
BsuRI GGCC 2 cut(s) 767, 967
BtgI CCRYGG 1 cut(s) 252
BtgZI GCGATG 2 cut(s) 957, 1587
BtrI CACGTC 2 cut(s) 265, 922
BtsCI GGATG 4 cut(s) 1344, 1433, 1467, 1564
BtsI GCAGTG 3 cut(s) 125, 516, 1173
BtsIMutI CAGTG 5 cut(s) 125, 516, 751, 1173, 1278
Cac8I GCNNGC 1 cut(s) 132
CaiI CAGNNNCTG 1 cut(s) 620
CciI TCATGA 2 cut(s) 490, 1077
CfoI GCGC 3 cut(s) 296, 984, 1503
Cfr10I RCCGGY 1 cut(s) 767
CseI GACGC 1 cut(s) 335
Csp6I GTAC 5 cut(s) 106, 872, 1053, 1092, 1197
CspCI CAANNNNNGTGG 2 cut(s) 246, 281
CviAII CATG 7 cut(s) 491, 674, 763, 969, 1039, 1078, 1300
CviQI GTAC 5 cut(s) 106, 872, 1053, 1092, 1197
DdeI CTNAG 3 cut(s) 629, 1116, 1233
DpnI GATC 5 cut(s) 222, 527, 1019, 1416, 1592
DpnII GATC 5 cut(s) 220, 525, 1017, 1414, 1590
DraI TTTAAA 1 cut(s) 1533
DraIII CACNNNGTG 1 cut(s) 63
DrdI GACNNNNNNGTC 1 cut(s) 1021
DseDI GACNNNNNNGTC 1 cut(s) 1021
EaeI YGGCCR 2 cut(s) 765, 965
Eam1104I CTCTTC 1 cut(s) 495
EarI CTCTTC 1 cut(s) 495
Eco24I GRGCYC 2 cut(s) 136, 1167
Eco31I GGTCTC 1 cut(s) 938
Eco47III AGCGCT 1 cut(s) 1502
Eco57I CTGAAG 1 cut(s) 676
Eco72I CACGTG 1 cut(s) 299
EcoNI CCTNNNNNAGG 1 cut(s) 1236
EcoRII CCWGG 1 cut(s) 428
EcoT22I ATGCAT 1 cut(s) 1040
EcoT38I GRGCYC 2 cut(s) 136, 1167
Esp3I CGTCTC 1 cut(s) 1007
FaeI CATG 7 cut(s) 494, 677, 766, 972, 1042, 1081, 1303
FaqI GGGAC 3 cut(s) 446, 462, 1627
FatI CATG 7 cut(s) 490, 673, 762, 968, 1038, 1077, 1299
FauI CCCGC 1 cut(s) 1185
FbaI TGATCA 1 cut(s) 525
FblI GTMKAC 1 cut(s) 741
Fnu4HI GCNGC 6 cut(s) 303, 417, 507, 549, 572, 1634
FokI GGATG 4 cut(s) 1351, 1420, 1454, 1571
FriOI GRGCYC 2 cut(s) 136, 1167
Fsp4HI GCNGC 6 cut(s) 303, 417, 507, 549, 572, 1634
FspBI CTAG 4 cut(s) 306, 902, 953, 1059
GlaI GCGC 3 cut(s) 295, 983, 1502
GluI GCNGC 6 cut(s) 303, 417, 507, 549, 572, 1634
GsaI CCCAGC 2 cut(s) 1359, 1507
HaeII RGCGCY 1 cut(s) 1504
HaeIII GGCC 2 cut(s) 767, 967
HapII CCGG 4 cut(s) 194, 768, 1021, 1161
HgaI GACGC 1 cut(s) 335
HhaI GCGC 3 cut(s) 296, 984, 1503
Hin1I GRCGYC 1 cut(s) 327
Hin1II CATG 7 cut(s) 494, 677, 766, 972, 1042, 1081, 1303
Hin6I GCGC 3 cut(s) 294, 982, 1501
HinP1I GCGC 3 cut(s) 294, 982, 1501
HincII GTYRAC 3 cut(s) 403, 829, 919
HindII GTYRAC 3 cut(s) 403, 829, 919
HindIII AAGCTT 1 cut(s) 339
HinfI GANTC 9 cut(s) 197, 450, 487, 494, 667, 687, 949, 1327, 1363
HpaI GTTAAC 1 cut(s) 829
HpaII CCGG 4 cut(s) 194, 768, 1021, 1161
HphI GGTGA 3 cut(s) 280, 466, 1221
Hpy166II GTNNAC 5 cut(s) 403, 742, 829, 919, 996
Hpy188I TCNGA 3 cut(s) 499, 990, 1403
Hpy188III TCNNGA 7 cut(s) 178, 491, 902, 935, 1078, 1106, 1513
Hpy8I GTNNAC 5 cut(s) 403, 742, 829, 919, 996
Hpy99I CGWCG 3 cut(s) 1139, 1158, 1322
HpyAV CCTTC 2 cut(s) 899, 1385
HpyCH4III ACNGT 8 cut(s) 253, 538, 587, 746, 794, 1091, 1273, 1523
HpyCH4IV ACGT 6 cut(s) 113, 264, 298, 399, 831, 921
HpyCH4V TGCA 7 cut(s) 66, 302, 509, 623, 677, 1038, 1046
HpyF10VI GCNNNNNNNGC 9 cut(s) 63, 131, 293, 302, 773, 973, 1184, 1500, 1633
HpyF3I CTNAG 3 cut(s) 629, 1116, 1233
HpySE526I ACGT 6 cut(s) 113, 264, 298, 399, 831, 921
Hsp92I GRCGYC 1 cut(s) 327
Hsp92II CATG 7 cut(s) 494, 677, 766, 972, 1042, 1081, 1303
HspAI GCGC 3 cut(s) 294, 982, 1501
KpnI GGTACC 1 cut(s) 1200
Ksp22I TGATCA 1 cut(s) 525
KspAI GTTAAC 1 cut(s) 829
Kzo9I GATC 5 cut(s) 220, 525, 1017, 1414, 1590
LmnI GCTCC 4 cut(s) 89, 149, 599, 1163
Lsp1109I GCAGC 5 cut(s) 314, 493, 560, 583, 1620
LweI GCATC 1 cut(s) 768
MaeI CTAG 4 cut(s) 306, 902, 953, 1059
MaeII ACGT 6 cut(s) 113, 264, 298, 399, 831, 921
MaeIII GTNAC 5 cut(s) 513, 796, 1273, 1429, 1442
MalI GATC 5 cut(s) 222, 527, 1019, 1416, 1592
MboI GATC 5 cut(s) 220, 525, 1017, 1414, 1590
MboII GAAGA 5 cut(s) 371, 512, 682, 937, 1633
MfeI CAATTG 2 cut(s) 258, 643
MhlI GDGCHC 4 cut(s) 136, 1167, 1356, 1381
MlsI TGGCCA 1 cut(s) 967
MluCI AATT 8 cut(s) 258, 643, 849, 960, 1069, 1284, 1481, 1547
MluNI TGGCCA 1 cut(s) 967
MlyI GAGTC 6 cut(s) 191, 444, 503, 661, 696, 1336
MmeI TCCRAC 2 cut(s) 477, 1223
MnlI CCTC 5 cut(s) 53, 221, 362, 496, 1481
Mox20I TGGCCA 1 cut(s) 967
Mph1103I ATGCAT 1 cut(s) 1040
MscI TGGCCA 1 cut(s) 967
MseI TTAA 4 cut(s) 681, 828, 1484, 1532
MslI CAYNNNNRTG 1 cut(s) 251
Msp20I TGGCCA 1 cut(s) 967
MspI CCGG 4 cut(s) 194, 768, 1021, 1161
MspR9I CCNGG 2 cut(s) 430, 1162
MunI CAATTG 2 cut(s) 258, 643
Mva1269I GAATGC 2 cut(s) 277, 776
MvaI CCWGG 1 cut(s) 430
MvnI CGCG 2 cut(s) 294, 1192
MwoI GCNNNNNNNGC 9 cut(s) 63, 131, 293, 302, 773, 973, 1184, 1500, 1633
NciI CCSGG 1 cut(s) 1162
NdeII GATC 5 cut(s) 220, 525, 1017, 1414, 1590
NlaIII CATG 7 cut(s) 494, 677, 766, 972, 1042, 1081, 1303
NlaIV GGNNCC 4 cut(s) 58, 1198, 1266, 1525
NmuCI GTSAC 5 cut(s) 513, 796, 1273, 1429, 1442
NsiI ATGCAT 1 cut(s) 1040
NspI RCATGY 2 cut(s) 677, 1303
PagI TCATGA 2 cut(s) 490, 1077
PciI ACATGT 1 cut(s) 1299
PcsI WCGNNNNNNNCGW 1 cut(s) 110
PctI GAATGC 2 cut(s) 277, 776
PfeI GAWTC 3 cut(s) 487, 949, 1363
PflMI CCANNNNNTGG 2 cut(s) 483, 1610
PkrI GCNGC 6 cut(s) 304, 418, 508, 550, 573, 1635
Ple19I CGATCG 1 cut(s) 1417
PleI GAGTC 6 cut(s) 191, 444, 502, 661, 695, 1335
PmaCI CACGTG 1 cut(s) 299
PmlI CACGTG 1 cut(s) 299
PpsI GAGTC 6 cut(s) 191, 444, 502, 661, 695, 1335
Ppu21I YACGTR 1 cut(s) 299
PscI ACATGT 1 cut(s) 1299
Psp1406I AACGTT 1 cut(s) 831
Psp6I CCWGG 1 cut(s) 428
PspCI CACGTG 1 cut(s) 299
PspFI CCCAGC 2 cut(s) 1355, 1503
PspGI CCWGG 1 cut(s) 428
PspN4I GGNNCC 4 cut(s) 58, 1198, 1266, 1525
PsrI GAACNNNNNNTAC 2 cut(s) 98, 130
PstI CTGCAG 1 cut(s) 511
PstNI CAGNNNCTG 1 cut(s) 620
PvuI CGATCG 1 cut(s) 1417
RgaI GCGATCGC 1 cut(s) 1417
RsaI GTAC 5 cut(s) 107, 873, 1054, 1093, 1198
RsaNI GTAC 5 cut(s) 106, 872, 1053, 1092, 1197
RseI CAYNNNNRTG 1 cut(s) 251
SaqAI TTAA 4 cut(s) 681, 828, 1484, 1532
SatI GCNGC 6 cut(s) 303, 417, 507, 549, 572, 1634
Sau3AI GATC 5 cut(s) 220, 525, 1017, 1414, 1590
ScaI AGTACT 1 cut(s) 1054
SchI GAGTC 6 cut(s) 191, 444, 503, 661, 696, 1336
ScrFI CCNGG 2 cut(s) 430, 1162
SduI GDGCHC 4 cut(s) 136, 1167, 1356, 1381
SfaAI GCGATCGC 1 cut(s) 1417
SfaNI GCATC 1 cut(s) 768
SfcI CTRYAG 3 cut(s) 507, 1209, 1384
SgfI GCGATCGC 1 cut(s) 1417
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 1 cut(s) 407
SmoI CTYRAG 1 cut(s) 407
Sse9I AATT 8 cut(s) 258, 643, 849, 960, 1069, 1284, 1481, 1547
SsiI CCGC 5 cut(s) 156, 417, 880, 897, 1192
SspMI CTAG 4 cut(s) 306, 902, 953, 1059
StyD4I CCNGG 2 cut(s) 428, 1160
TaaI ACNGT 8 cut(s) 253, 538, 587, 746, 794, 1091, 1273, 1523
TaiI ACGT 6 cut(s) 116, 267, 301, 402, 834, 924
TaqI TCGA 2 cut(s) 936, 1330
TasI AATT 8 cut(s) 258, 643, 849, 960, 1069, 1284, 1481, 1547
TatI WGTACW 2 cut(s) 1052, 1091
TauI GCSGC 1 cut(s) 419
TfiI GAWTC 3 cut(s) 487, 949, 1363
Tru1I TTAA 4 cut(s) 681, 828, 1484, 1532
Tru9I TTAA 4 cut(s) 681, 828, 1484, 1532
TscAI CASTG 5 cut(s) 132, 516, 751, 1180, 1278
TseFI GTSAC 5 cut(s) 513, 796, 1273, 1429, 1442
TseI GCWGC 5 cut(s) 302, 506, 548, 571, 1633
Tsp45I GTSAC 5 cut(s) 513, 796, 1273, 1429, 1442
TspDTI ATGAA 3 cut(s) 106, 351, 873
TspGWI ACGGA 1 cut(s) 699
TspRI CASTG 5 cut(s) 132, 516, 751, 1180, 1278
Van91I CCANNNNNTGG 2 cut(s) 483, 1610
XagI CCTNNNNNAGG 1 cut(s) 1236
XapI RAATTY 1 cut(s) 960
XbaI TCTAGA 1 cut(s) 901
XceI RCATGY 2 cut(s) 677, 1303
XcmI CCANNNNNNNNNTGG 1 cut(s) 143
XmiI GTMKAC 1 cut(s) 741
XspI CTAG 4 cut(s) 306, 902, 953, 1059
ZrmI AGTACT 1 cut(s) 1054
Zsp2I ATGCAT 1 cut(s) 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.