Transcription factor S-II (TFIIS), central domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29639 AT3G29639 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 |
| fragaria_vesca | FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 |
| malus_domestica | MD08G1136900.v1.1 MD15G1115600.v1.1 |
| prunus_persica | Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 |
| pyrus_communis | pycom08g11560 pycom15g10420 |
| rosa_chinensis | RchiOBHm_Chr6g0312791 |
| rosa_laevigata | RLG00000010299 |
| rosa_multiflora | Rmu_sc0008049.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00156490 |
| rosa_rugosa | Rorug06G0399700 |
| rosa_samantha | Rh6AG516700 Rh6BG528000 Rh6CG532800 Rh6DG519000 Rh6DG519100 |
| rosa_wichuraiana | Rw6G044880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 333, 2105 |
| AarI | CACCTGC | 1 cut(s) | 1712 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1751 |
| AatII | GACGTC | 1 cut(s) | 2166 |
| Acc36I | ACCTGC | 2 cut(s) | 1207, 1712 |
| AccB1I | GGYRCC | 3 cut(s) | 373, 983, 3304 |
| AccI | GTMKAC | 3 cut(s) | 359, 1676, 1755 |
| AccII | CGCG | 2 cut(s) | 706, 2789 |
| AccIII | TCCGGA | 1 cut(s) | 2443 |
| AcoI | YGGCCR | 1 cut(s) | 988 |
| AcsI | RAATTY | 8 cut(s) | 98, 931, 1055, 1191, 2016, 2550, 2921, 3461 |
| AcuI | CTGAAG | 7 cut(s) | 138, 936, 1224, 1518, 1800, 2022, 3278 |
| AcyI | GRCGYC | 2 cut(s) | 407, 2163 |
| AfaI | GTAC | 7 cut(s) | 195, 2023, 2501, 2740, 3094, 3180, 3203 |
| AflIII | ACRYGT | 3 cut(s) | 2239, 2614, 2787 |
| AgeI | ACCGGT | 1 cut(s) | 2132 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2219 |
| AhlI | ACTAGT | 1 cut(s) | 2735 |
| AjnI | CCWGG | 9 cut(s) | 205, 295, 598, 886, 1148, 2335, 2887, 2980, 3431 |
| AleI | CACNNNNGTG | 1 cut(s) | 1572 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 259, 291 |
| AluBI | AGCT | 8 cut(s) | 494, 724, 1421, 1471, 1784, 2398, 3052, 3377 |
| AluI | AGCT | 8 cut(s) | 494, 724, 1421, 1471, 1784, 2398, 3052, 3377 |
| Alw21I | GWGCWC | 1 cut(s) | 516 |
| Alw26I | GTCTC | 8 cut(s) | 675, 1269, 1540, 1849, 1934, 1959, 2761, 3250 |
| Alw44I | GTGCAC | 1 cut(s) | 512 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1949, 2045 |
| Ama87I | CYCGRG | 2 cut(s) | 2808, 2876 |
| Aor13HI | TCCGGA | 1 cut(s) | 2443 |
| AoxI | GGCC | 9 cut(s) | 988, 1278, 1801, 2280, 2333, 2644, 2884, 2963, 2978 |
| ApaLI | GTGCAC | 1 cut(s) | 512 |
| ApeKI | GCWGC | 9 cut(s) | 466, 779, 1718, 2398, 2995, 3169, 3223, 3337, 3413 |
| ApoI | RAATTY | 8 cut(s) | 98, 931, 1055, 1191, 2016, 2550, 2921, 3461 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1094, 1126, 3052, 3084 |
| AsiGI | ACCGGT | 1 cut(s) | 2132 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1055 |
| AspLEI | GCGC | 4 cut(s) | 475, 547, 2995, 3370 |
| AspS9I | GGNCC | 5 cut(s) | 1238, 1350, 2885, 2964, 2978 |
| AsuC2I | CCSGG | 5 cut(s) | 525, 2877, 2878, 3032, 3423 |
| AsuII | TTCGAA | 2 cut(s) | 1685, 2711 |
| AvaI | CYCGRG | 2 cut(s) | 2808, 2876 |
| AvaII | GGWCC | 2 cut(s) | 1238, 1350 |
| AxyI | CCTNAGG | 1 cut(s) | 924 |
| BaeGI | GKGCMC | 1 cut(s) | 516 |
| BamHI | GGATCC | 1 cut(s) | 187 |
| BanI | GGYRCC | 3 cut(s) | 373, 983, 3304 |
| BanII | GRGCYC | 1 cut(s) | 3355 |
| BauI | CACGAG | 1 cut(s) | 1080 |
| BbsI | GAAGAC | 2 cut(s) | 672, 1749 |
| Bbv12I | GWGCWC | 1 cut(s) | 516 |
| BbvI | GCAGC | 9 cut(s) | 478, 766, 1705, 2385, 3007, 3181, 3210, 3349, 3400 |
| BccI | CCATC | 8 cut(s) | 562, 724, 968, 1040, 1210, 1480, 1801, 2812 |
| BceAI | ACGGC | 4 cut(s) | 2156, 2518, 2814, 3250 |
| BciT130I | CCWGG | 9 cut(s) | 207, 297, 600, 888, 1150, 2337, 2889, 2982, 3433 |
| BciVI | GTATCC | 3 cut(s) | 702, 1975, 3015 |
| BcnI | CCSGG | 5 cut(s) | 525, 2877, 2878, 3032, 3423 |
| BcoDI | GTCTC | 8 cut(s) | 675, 1269, 1540, 1849, 1934, 1959, 2761, 3250 |
| BcuI | ACTAGT | 1 cut(s) | 2735 |
| BfaI | CTAG | 8 cut(s) | 129, 684, 1505, 1850, 2211, 2736, 2763, 3450 |
| BfmI | CTRYAG | 3 cut(s) | 495, 1446, 1719 |
| BfoI | RGCGCY | 2 cut(s) | 476, 548 |
| BfuAI | ACCTGC | 2 cut(s) | 1207, 1712 |
| BfuI | GTATCC | 3 cut(s) | 702, 1975, 3015 |
| BglII | AGATCT | 1 cut(s) | 1387 |
| BlpI | GCTNAGC | 2 cut(s) | 2591, 3417 |
| BmcAI | AGTACT | 1 cut(s) | 2740 |
| Bme18I | GGWCC | 2 cut(s) | 1238, 1350 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2219 |
| BmeT110I | CYCGRG | 2 cut(s) | 2808, 2876 |
| BmgT120I | GGNCC | 5 cut(s) | 1238, 1350, 2885, 2964, 2978 |
| BmrI | ACTGGG | 1 cut(s) | 317 |
| BmsI | GCATC | 5 cut(s) | 811, 997, 1615, 2032, 2362 |
| BmuI | ACTGGG | 1 cut(s) | 317 |
| BpiI | GAAGAC | 2 cut(s) | 672, 1749 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1931, 1963, 2352, 2384 |
| BpmI | CTGGAG | 5 cut(s) | 870, 1251, 1407, 1431, 2686 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2591, 3417 |
| Bpu14I | TTCGAA | 2 cut(s) | 1685, 2711 |
| BpuEI | CTTGAG | 1 cut(s) | 1244 |
| BpuMI | CCSGG | 5 cut(s) | 525, 2877, 2878, 3032, 3423 |
| BsaAI | YACGTR | 1 cut(s) | 2503 |
| BsaHI | GRCGYC | 2 cut(s) | 407, 2163 |
| BsaI | GGTCTC | 2 cut(s) | 675, 3250 |
| BsaWI | WCCGGW | 3 cut(s) | 2132, 2443, 3160 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1867, 1897 |
| Bse118I | RCCGGY | 4 cut(s) | 986, 2132, 3226, 3364 |
| Bse1I | ACTGG | 5 cut(s) | 312, 617, 1619, 2058, 2336 |
| Bse21I | CCTNAGG | 1 cut(s) | 924 |
| Bse3DI | GCAATG | 1 cut(s) | 323 |
| BseAI | TCCGGA | 1 cut(s) | 2443 |
| BseBI | CCWGG | 9 cut(s) | 207, 297, 600, 888, 1150, 2337, 2889, 2982, 3433 |
| BseGI | GGATG | 9 cut(s) | 120, 826, 895, 1491, 1819, 2452, 2515, 2804, 3124 |
| BseMI | GCAATG | 1 cut(s) | 323 |
| BseNI | ACTGG | 5 cut(s) | 312, 617, 1619, 2058, 2336 |
| BseRI | GAGGAG | 3 cut(s) | 854, 857, 2959 |
| BseSI | GKGCMC | 1 cut(s) | 516 |
| BseXI | GCAGC | 9 cut(s) | 478, 766, 1705, 2385, 3007, 3181, 3210, 3349, 3400 |
| BseYI | CCCAGC | 3 cut(s) | 882, 2096, 3240 |
| BsgI | GTGCAG | 3 cut(s) | 608, 2163, 3356 |
| Bsh1236I | CGCG | 2 cut(s) | 706, 2789 |
| BshFI | GGCC | 9 cut(s) | 990, 1280, 1803, 2282, 2335, 2646, 2886, 2965, 2980 |
| BshNI | GGYRCC | 3 cut(s) | 373, 983, 3304 |
| BshTI | ACCGGT | 1 cut(s) | 2132 |
| BsiHKAI | GWGCWC | 1 cut(s) | 516 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2808, 2876 |
| BsiWI | CGTACG | 1 cut(s) | 2499 |
| BslFI | GGGAC | 3 cut(s) | 889, 1336, 3274 |
| BsmAI | GTCTC | 8 cut(s) | 675, 1269, 1540, 1849, 1934, 1959, 2761, 3250 |
| BsmBI | CGTCTC | 1 cut(s) | 1540 |
| BsmFI | GGGAC | 3 cut(s) | 889, 1336, 3274 |
| BsmI | GAATGC | 1 cut(s) | 2478 |
| BsnI | GGCC | 9 cut(s) | 990, 1280, 1803, 2282, 2335, 2646, 2886, 2965, 2980 |
| Bso31I | GGTCTC | 2 cut(s) | 675, 3250 |
| BsoBI | CYCGRG | 2 cut(s) | 2808, 2876 |
| Bsp119I | TTCGAA | 2 cut(s) | 1685, 2711 |
| Bsp1286I | GDGCHC | 2 cut(s) | 516, 3355 |
| Bsp13I | TCCGGA | 1 cut(s) | 2443 |
| Bsp1407I | TGTACA | 1 cut(s) | 2021 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2591, 3417 |
| Bsp19I | CCATGG | 3 cut(s) | 458, 576, 2277 |
| BspANI | GGCC | 9 cut(s) | 990, 1280, 1803, 2282, 2335, 2646, 2886, 2965, 2980 |
| BspEI | TCCGGA | 1 cut(s) | 2443 |
| BspFNI | CGCG | 2 cut(s) | 706, 2789 |
| BspMAI | CTGCAG | 2 cut(s) | 1450, 1723 |
| BspMI | ACCTGC | 2 cut(s) | 1207, 1712 |
| BspQI | GCTCTTC | 3 cut(s) | 484, 912, 2899 |
| BspT104I | TTCGAA | 2 cut(s) | 1685, 2711 |
| BspT107I | GGYRCC | 3 cut(s) | 373, 983, 3304 |
| BspTNI | GGTCTC | 2 cut(s) | 675, 3250 |
| BsrDI | GCAATG | 1 cut(s) | 323 |
| BsrFI | RCCGGY | 4 cut(s) | 986, 2132, 3226, 3364 |
| BsrGI | TGTACA | 1 cut(s) | 2021 |
| BsrI | ACTGG | 5 cut(s) | 312, 617, 1619, 2058, 2336 |
| BssAI | RCCGGY | 4 cut(s) | 986, 2132, 3226, 3364 |
| BssNI | GRCGYC | 2 cut(s) | 407, 2163 |
| BssSI | CACGAG | 1 cut(s) | 1080 |
| BssT1I | CCWWGG | 6 cut(s) | 458, 576, 1701, 1869, 1977, 2277 |
| Bst2BI | CACGAG | 1 cut(s) | 1080 |
| Bst2UI | CCWGG | 9 cut(s) | 207, 297, 600, 888, 1150, 2337, 2889, 2982, 3433 |
| Bst4CI | ACNGT | 8 cut(s) | 27, 1302, 1987, 2090, 2114, 2581, 2633, 2724 |
| Bst6I | CTCTTC | 6 cut(s) | 484, 912, 1266, 1724, 2353, 2899 |
| BstACI | GRCGYC | 2 cut(s) | 407, 2163 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 595, 2398, 3250 |
| BstAUI | TGTACA | 1 cut(s) | 2021 |
| BstBAI | YACGTR | 1 cut(s) | 2503 |
| BstBI | TTCGAA | 2 cut(s) | 1685, 2711 |
| BstC8I | GCNNGC | 5 cut(s) | 471, 543, 988, 2476, 2991 |
| BstDSI | CCRYGG | 5 cut(s) | 458, 576, 704, 2277, 3128 |
| BstEII | GGTNACC | 1 cut(s) | 603 |
| BstF5I | GGATG | 9 cut(s) | 120, 826, 895, 1491, 1819, 2452, 2515, 2804, 3124 |
| BstFNI | CGCG | 2 cut(s) | 706, 2789 |
| BstH2I | RGCGCY | 2 cut(s) | 476, 548 |
| BstHHI | GCGC | 4 cut(s) | 475, 547, 2995, 3370 |
| BstMAI | GTCTC | 8 cut(s) | 675, 1269, 1540, 1849, 1934, 1959, 2761, 3250 |
| BstNI | CCWGG | 9 cut(s) | 207, 297, 600, 888, 1150, 2337, 2889, 2982, 3433 |
| BstNSI | RCATGY | 1 cut(s) | 2243 |
| BstPI | GGTNACC | 1 cut(s) | 603 |
| BstSFI | CTRYAG | 3 cut(s) | 495, 1446, 1719 |
| BstSLI | GKGCMC | 1 cut(s) | 516 |
| BstUI | CGCG | 2 cut(s) | 706, 2789 |
| BstV1I | GCAGC | 9 cut(s) | 478, 766, 1705, 2385, 3007, 3181, 3210, 3349, 3400 |
| BstV2I | GAAGAC | 2 cut(s) | 672, 1749 |
| BstX2I | RGATCY | 7 cut(s) | 187, 506, 752, 1219, 1387, 1828, 2295 |
| BstYI | RGATCY | 7 cut(s) | 187, 506, 752, 1219, 1387, 1828, 2295 |
| Bsu36I | CCTNAGG | 1 cut(s) | 924 |
| BsuI | GTATCC | 3 cut(s) | 702, 1975, 3015 |
| BsuRI | GGCC | 9 cut(s) | 990, 1280, 1803, 2282, 2335, 2646, 2886, 2965, 2980 |
| BtgI | CCRYGG | 5 cut(s) | 458, 576, 704, 2277, 3128 |
| BtsCI | GGATG | 9 cut(s) | 120, 826, 895, 1491, 1819, 2452, 2515, 2804, 3124 |
| BtsI | GCAGTG | 1 cut(s) | 2319 |
| BtsIMutI | CAGTG | 7 cut(s) | 23, 278, 624, 2065, 2173, 2319, 2638 |
| BveI | ACCTGC | 2 cut(s) | 1207, 1712 |
| Cac8I | GCNNGC | 5 cut(s) | 471, 543, 988, 2476, 2991 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1949, 2045 |
| CfoI | GCGC | 4 cut(s) | 475, 547, 2995, 3370 |
| Cfr10I | RCCGGY | 4 cut(s) | 986, 2132, 3226, 3364 |
| Cfr13I | GGNCC | 5 cut(s) | 1238, 1350, 2885, 2964, 2978 |
| Cfr42I | CCGCGG | 1 cut(s) | 707 |
| Cfr9I | CCCGGG | 1 cut(s) | 2876 |
| CseI | GACGC | 2 cut(s) | 415, 2778 |
| Csp6I | GTAC | 7 cut(s) | 194, 2022, 2500, 2739, 3093, 3179, 3202 |
| CspAI | ACCGGT | 1 cut(s) | 2132 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3329, 3364 |
| CviQI | GTAC | 7 cut(s) | 194, 2022, 2500, 2739, 3093, 3179, 3202 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1751 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2219 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1751 |
| EaeI | YGGCCR | 1 cut(s) | 988 |
| Eam1104I | CTCTTC | 6 cut(s) | 484, 912, 1266, 1724, 2353, 2899 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2219 |
| EarI | CTCTTC | 6 cut(s) | 484, 912, 1266, 1724, 2353, 2899 |
| EciI | GGCGGA | 3 cut(s) | 659, 1498, 3345 |
| Eco130I | CCWWGG | 6 cut(s) | 458, 576, 1701, 1869, 1977, 2277 |
| Eco147I | AGGCCT | 1 cut(s) | 1803 |
| Eco24I | GRGCYC | 1 cut(s) | 3355 |
| Eco31I | GGTCTC | 2 cut(s) | 675, 3250 |
| Eco32I | GATATC | 1 cut(s) | 2350 |
| Eco47I | GGWCC | 2 cut(s) | 1238, 1350 |
| Eco57I | CTGAAG | 7 cut(s) | 138, 936, 1224, 1518, 1800, 2022, 3278 |
| Eco81I | CCTNAGG | 1 cut(s) | 924 |
| Eco88I | CYCGRG | 2 cut(s) | 2808, 2876 |
| Eco91I | GGTNACC | 1 cut(s) | 603 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1350, 2964, 2978 |
| EcoO65I | GGTNACC | 1 cut(s) | 603 |
| EcoRI | GAATTC | 3 cut(s) | 931, 1055, 2921 |
| EcoRII | CCWGG | 9 cut(s) | 205, 295, 598, 886, 1148, 2335, 2887, 2980, 3431 |
| EcoRV | GATATC | 1 cut(s) | 2350 |
| EcoT14I | CCWWGG | 6 cut(s) | 458, 576, 1701, 1869, 1977, 2277 |
| EcoT22I | ATGCAT | 1 cut(s) | 2377 |
| EcoT38I | GRGCYC | 1 cut(s) | 3355 |
| ErhI | CCWWGG | 6 cut(s) | 458, 576, 1701, 1869, 1977, 2277 |
| Esp3I | CGTCTC | 1 cut(s) | 1540 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1110, 1142 |
| FaqI | GGGAC | 3 cut(s) | 889, 1336, 3274 |
| FblI | GTMKAC | 3 cut(s) | 359, 1676, 1755 |
| FokI | GGATG | 9 cut(s) | 127, 833, 882, 1498, 1826, 2459, 2522, 2791, 3111 |
| FriOI | GRGCYC | 1 cut(s) | 3355 |
| FspBI | CTAG | 8 cut(s) | 129, 684, 1505, 1850, 2211, 2736, 2763, 3450 |
| GlaI | GCGC | 4 cut(s) | 474, 546, 2994, 3369 |
| GsaI | CCCAGC | 3 cut(s) | 886, 2100, 3244 |
| GsuI | CTGGAG | 5 cut(s) | 870, 1251, 1407, 1431, 2686 |
| HaeII | RGCGCY | 2 cut(s) | 476, 548 |
| HaeIII | GGCC | 9 cut(s) | 990, 1280, 1803, 2282, 2335, 2646, 2886, 2965, 2980 |
| HgaI | GACGC | 2 cut(s) | 415, 2778 |
| HhaI | GCGC | 4 cut(s) | 475, 547, 2995, 3370 |
| Hin1I | GRCGYC | 2 cut(s) | 407, 2163 |
| Hin6I | GCGC | 4 cut(s) | 473, 545, 2993, 3368 |
| HinP1I | GCGC | 4 cut(s) | 473, 545, 2993, 3368 |
| HincII | GTYRAC | 2 cut(s) | 291, 360 |
| HindII | GTYRAC | 2 cut(s) | 291, 360 |
| HindIII | AAGCTT | 1 cut(s) | 722 |
| Hpy99I | CGWCG | 8 cut(s) | 361, 409, 2461, 2683, 2855, 3143, 3146, 3149 |
| HpyCH4III | ACNGT | 8 cut(s) | 27, 1302, 1987, 2090, 2114, 2581, 2633, 2724 |
| HpyCH4IV | ACGT | 4 cut(s) | 2163, 2502, 2616, 2678 |
| HpySE526I | ACGT | 4 cut(s) | 2163, 2502, 2616, 2678 |
| Hsp92I | GRCGYC | 2 cut(s) | 407, 2163 |
| HspAI | GCGC | 4 cut(s) | 473, 545, 2993, 3368 |
| Kpn2I | TCCGGA | 1 cut(s) | 2443 |
| KroI | GCCGGC | 1 cut(s) | 986 |
| KroNI | GCCGGC | 1 cut(s) | 988 |
| KspI | CCGCGG | 1 cut(s) | 707 |
| LguI | GCTCTTC | 3 cut(s) | 484, 912, 2899 |
| LmnI | GCTCC | 9 cut(s) | 526, 851, 1426, 1468, 2258, 2806, 3242, 3358, 3374 |
| Lsp1109I | GCAGC | 9 cut(s) | 478, 766, 1705, 2385, 3007, 3181, 3210, 3349, 3400 |
| LweI | GCATC | 5 cut(s) | 811, 997, 1615, 2032, 2362 |
| MaeI | CTAG | 8 cut(s) | 129, 684, 1505, 1850, 2211, 2736, 2763, 3450 |
| MaeII | ACGT | 4 cut(s) | 2163, 2502, 2616, 2678 |
| MaeIII | GTNAC | 9 cut(s) | 18, 131, 141, 210, 603, 1100, 1909, 2221, 2503 |
| MfeI | CAATTG | 2 cut(s) | 1608, 1839 |
| MflI | RGATCY | 7 cut(s) | 187, 506, 752, 1219, 1387, 1828, 2295 |
| MhlI | GDGCHC | 2 cut(s) | 516, 3355 |
| MluI | ACGCGT | 1 cut(s) | 2787 |
| MmeI | TCCRAC | 2 cut(s) | 165, 2439 |
| Mph1103I | ATGCAT | 1 cut(s) | 2377 |
| MroI | TCCGGA | 1 cut(s) | 2443 |
| MroNI | GCCGGC | 1 cut(s) | 986 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1055 |
| MseI | TTAA | 7 cut(s) | 795, 903, 1368, 1793, 1989, 2628, 2675 |
| MslI | CAYNNNNRTG | 4 cut(s) | 47, 1572, 2429, 2907 |
| MspA1I | CMGCKG | 2 cut(s) | 676, 706 |
| MunI | CAATTG | 2 cut(s) | 1608, 1839 |
| Mva1269I | GAATGC | 1 cut(s) | 2478 |
| MvaI | CCWGG | 9 cut(s) | 207, 297, 600, 888, 1150, 2337, 2889, 2982, 3433 |
| MvnI | CGCG | 2 cut(s) | 706, 2789 |
| NaeI | GCCGGC | 1 cut(s) | 988 |
| NciI | CCSGG | 5 cut(s) | 525, 2877, 2878, 3032, 3423 |
| NcoI | CCATGG | 3 cut(s) | 458, 576, 2277 |
| NgoMIV | GCCGGC | 1 cut(s) | 986 |
| NmeAIII | GCCGAG | 1 cut(s) | 2878 |
| NmuCI | GTSAC | 7 cut(s) | 18, 141, 210, 603, 1100, 2221, 2503 |
| NsiI | ATGCAT | 1 cut(s) | 2377 |
| NspI | RCATGY | 1 cut(s) | 2243 |
| NspV | TTCGAA | 2 cut(s) | 1685, 2711 |
| OliI | CACNNNNGTG | 1 cut(s) | 1572 |
| PaqCI | CACCTGC | 1 cut(s) | 1712 |
| PceI | AGGCCT | 1 cut(s) | 1803 |
| PciI | ACATGT | 1 cut(s) | 2239 |
| PciSI | GCTCTTC | 3 cut(s) | 484, 912, 2899 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 620, 2169, 3125, 3144 |
| PctI | GAATGC | 1 cut(s) | 2478 |
| PdiI | GCCGGC | 1 cut(s) | 988 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1055 |
| Pfl23II | CGTACG | 1 cut(s) | 2499 |
| PfoI | TCCNGGA | 1 cut(s) | 523 |
| PinAI | ACCGGT | 1 cut(s) | 2132 |
| Ppu21I | YACGTR | 1 cut(s) | 2503 |
| PpuMI | RGGWCCY | 1 cut(s) | 1350 |
| PscI | ACATGT | 1 cut(s) | 2239 |
| PsiI | TTATAA | 2 cut(s) | 333, 2105 |
| Psp5II | RGGWCCY | 1 cut(s) | 1350 |
| Psp6I | CCWGG | 9 cut(s) | 205, 295, 598, 886, 1148, 2335, 2887, 2980, 3431 |
| PspEI | GGTNACC | 1 cut(s) | 603 |
| PspFI | CCCAGC | 3 cut(s) | 882, 2096, 3240 |
| PspGI | CCWGG | 9 cut(s) | 205, 295, 598, 886, 1148, 2335, 2887, 2980, 3431 |
| PspLI | CGTACG | 1 cut(s) | 2499 |
| PspPI | GGNCC | 5 cut(s) | 1238, 1350, 2885, 2964, 2978 |
| PspPPI | RGGWCCY | 1 cut(s) | 1350 |
| PstI | CTGCAG | 2 cut(s) | 1450, 1723 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1949, 2045 |
| PsuI | RGATCY | 7 cut(s) | 187, 506, 752, 1219, 1387, 1828, 2295 |
| RsaI | GTAC | 7 cut(s) | 195, 2023, 2501, 2740, 3094, 3180, 3203 |
| RsaNI | GTAC | 7 cut(s) | 194, 2022, 2500, 2739, 3093, 3179, 3202 |
| RseI | CAYNNNNRTG | 4 cut(s) | 47, 1572, 2429, 2907 |
| SacII | CCGCGG | 1 cut(s) | 707 |
| SalI | GTCGAC | 1 cut(s) | 358 |
| SapI | GCTCTTC | 3 cut(s) | 484, 912, 2899 |
| SaqAI | TTAA | 7 cut(s) | 795, 903, 1368, 1793, 1989, 2628, 2675 |
| Sau96I | GGNCC | 5 cut(s) | 1238, 1350, 2885, 2964, 2978 |
| ScaI | AGTACT | 1 cut(s) | 2740 |
| SduI | GDGCHC | 2 cut(s) | 516, 3355 |
| SfaNI | GCATC | 5 cut(s) | 811, 997, 1615, 2032, 2362 |
| SfcI | CTRYAG | 3 cut(s) | 495, 1446, 1719 |
| Sfr303I | CCGCGG | 1 cut(s) | 707 |
| SfuI | TTCGAA | 2 cut(s) | 1685, 2711 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3364 |
| SgrBI | CCGCGG | 1 cut(s) | 707 |
| SinI | GGWCC | 2 cut(s) | 1238, 1350 |
| SmaI | CCCGGG | 1 cut(s) | 2878 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 47, 1572, 2429, 2907 |
| SmlI | CTYRAG | 1 cut(s) | 1223 |
| SmoI | CTYRAG | 1 cut(s) | 1223 |
| SpeI | ACTAGT | 1 cut(s) | 2735 |
| SseBI | AGGCCT | 1 cut(s) | 1803 |
| SspMI | CTAG | 8 cut(s) | 129, 684, 1505, 1850, 2211, 2736, 2763, 3450 |
| StuI | AGGCCT | 1 cut(s) | 1803 |
| StyI | CCWWGG | 6 cut(s) | 458, 576, 1701, 1869, 1977, 2277 |
| TaaI | ACNGT | 8 cut(s) | 27, 1302, 1987, 2090, 2114, 2581, 2633, 2724 |
| TaiI | ACGT | 4 cut(s) | 2166, 2505, 2619, 2681 |
| TaqI | TCGA | 8 cut(s) | 359, 719, 1685, 1823, 1890, 2370, 2711, 2942 |
| TatI | WGTACW | 3 cut(s) | 2021, 2738, 3092 |
| TauI | GCSGC | 2 cut(s) | 779, 3439 |
| Tru1I | TTAA | 7 cut(s) | 795, 903, 1368, 1793, 1989, 2628, 2675 |
| Tru9I | TTAA | 7 cut(s) | 795, 903, 1368, 1793, 1989, 2628, 2675 |
| TscAI | CASTG | 7 cut(s) | 30, 285, 624, 2065, 2173, 2326, 2638 |
| TseFI | GTSAC | 7 cut(s) | 18, 141, 210, 603, 1100, 2221, 2503 |
| TseI | GCWGC | 9 cut(s) | 466, 779, 1718, 2398, 2995, 3169, 3223, 3337, 3413 |
| Tsp45I | GTSAC | 7 cut(s) | 18, 141, 210, 603, 1100, 2221, 2503 |
| TspGWI | ACGGA | 4 cut(s) | 1833, 2275, 2522, 3117 |
| TspMI | CCCGGG | 1 cut(s) | 2876 |
| TspRI | CASTG | 7 cut(s) | 30, 285, 624, 2065, 2173, 2326, 2638 |
| VneI | GTGCAC | 1 cut(s) | 512 |
| VpaK11BI | GGWCC | 2 cut(s) | 1238, 1350 |
| XapI | RAATTY | 8 cut(s) | 98, 931, 1055, 1191, 2016, 2550, 2921, 3461 |
| XbaI | TCTAGA | 1 cut(s) | 2210 |
| XceI | RCATGY | 1 cut(s) | 2243 |
| XmaI | CCCGGG | 1 cut(s) | 2876 |
| XmiI | GTMKAC | 3 cut(s) | 359, 1676, 1755 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1055 |
| XspI | CTAG | 8 cut(s) | 129, 684, 1505, 1850, 2211, 2736, 2763, 3450 |
| ZraI | GACGTC | 1 cut(s) | 2164 |
| ZrmI | AGTACT | 1 cut(s) | 2740 |
| Zsp2I | ATGCAT | 1 cut(s) | 2377 |