Transcription factor S-II (TFIIS), central domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29639 AT3G29639 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 |
| fragaria_vesca | FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 |
| malus_domestica | MD08G1136900.v1.1 MD15G1115600.v1.1 |
| prunus_persica | Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 |
| pyrus_communis | pycom08g11560 pycom15g10420 |
| rosa_chinensis | RchiOBHm_Chr6g0312791 |
| rosa_laevigata | RLG00000010299 |
| rosa_multiflora | Rmu_sc0008049.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00156490 |
| rosa_rugosa | Rorug06G0399700 |
| rosa_samantha | Rh6AG516700 Rh6BG528000 Rh6CG532800 Rh6DG519000 Rh6DG519100 |
| rosa_wichuraiana | Rw6G044880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1706, 2887 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1666, 1745 |
| Acc16I | TGCGCA | 1 cut(s) | 582 |
| Acc36I | ACCTGC | 3 cut(s) | 1201, 1706, 2887 |
| AccB1I | GGYRCC | 3 cut(s) | 400, 3037, 3349 |
| AccI | GTMKAC | 3 cut(s) | 1670, 1749, 2625 |
| AccII | CGCG | 2 cut(s) | 700, 3265 |
| AccIII | TCCGGA | 1 cut(s) | 2485 |
| AclWI | GGATC | 8 cut(s) | 182, 195, 328, 508, 529, 604, 1221, 1830 |
| AcoI | YGGCCR | 2 cut(s) | 327, 3266 |
| AcsI | RAATTY | 8 cut(s) | 98, 285, 928, 1049, 1185, 2592, 2966, 3364 |
| AcuI | CTGAAG | 7 cut(s) | 933, 1218, 1512, 1584, 1755, 1794, 1941 |
| AcyI | GRCGYC | 1 cut(s) | 3038 |
| AfaI | GTAC | 6 cut(s) | 1962, 2543, 3050, 3225, 3248, 3360 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 759, 884, 1804, 1920, 2492, 2582, 2927, 3018, 3449 |
| AflIII | ACRYGT | 1 cut(s) | 2281 |
| AhlI | ACTAGT | 1 cut(s) | 2257 |
| AjnI | CCWGG | 8 cut(s) | 205, 517, 592, 883, 1142, 2932, 3025, 3476 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 259, 291 |
| Alw21I | GWGCWC | 1 cut(s) | 510 |
| Alw44I | GTGCAC | 1 cut(s) | 506 |
| AlwI | GGATC | 8 cut(s) | 182, 195, 328, 508, 529, 604, 1221, 1830 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1943, 2039 |
| Ama87I | CYCGRG | 2 cut(s) | 2921, 2943 |
| Aor13HI | TCCGGA | 1 cut(s) | 2485 |
| ApaLI | GTGCAC | 1 cut(s) | 506 |
| ApoI | RAATTY | 8 cut(s) | 98, 285, 928, 1049, 1185, 2592, 2966, 3364 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1088, 1120 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1049, 2520 |
| AspLEI | GCGC | 3 cut(s) | 583, 3040, 3415 |
| AspS9I | GGNCC | 9 cut(s) | 61, 467, 750, 1232, 1344, 2853, 2930, 3009, 3023 |
| AsuC2I | CCSGG | 5 cut(s) | 2851, 2922, 2923, 3206, 3468 |
| AsuHPI | GGTGA | 9 cut(s) | 12, 270, 516, 1580, 1730, 2288, 2307, 2363, 2729 |
| AsuII | TTCGAA | 1 cut(s) | 2753 |
| AsuNHI | GCTAGC | 1 cut(s) | 1498 |
| AvaI | CYCGRG | 2 cut(s) | 2921, 2943 |
| AvaII | GGWCC | 4 cut(s) | 61, 750, 1232, 1344 |
| AxyI | CCTNAGG | 1 cut(s) | 921 |
| BaeGI | GKGCMC | 2 cut(s) | 510, 2658 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3032, 3065 |
| BalI | TGGCCA | 1 cut(s) | 329 |
| BamHI | GGATCC | 1 cut(s) | 187 |
| BanI | GGYRCC | 3 cut(s) | 400, 3037, 3349 |
| BanII | GRGCYC | 1 cut(s) | 3400 |
| BbsI | GAAGAC | 3 cut(s) | 666, 1743, 1947 |
| Bbv12I | GWGCWC | 1 cut(s) | 510 |
| BccI | CCATC | 7 cut(s) | 52, 631, 943, 1034, 1474, 1805, 3340 |
| BceAI | ACGGC | 2 cut(s) | 2560, 3471 |
| BciT130I | CCWGG | 8 cut(s) | 207, 519, 594, 885, 1144, 2934, 3027, 3478 |
| BciVI | GTATCC | 1 cut(s) | 696 |
| BclI | TGATCA | 2 cut(s) | 2094, 2118 |
| BcnI | CCSGG | 5 cut(s) | 2851, 2922, 2923, 3206, 3468 |
| BcuI | ACTAGT | 1 cut(s) | 2257 |
| BfmI | CTRYAG | 5 cut(s) | 458, 489, 1440, 1713, 3078 |
| BfoI | RGCGCY | 1 cut(s) | 3041 |
| BfuAI | ACCTGC | 3 cut(s) | 1201, 1706, 2887 |
| BfuI | GTATCC | 1 cut(s) | 696 |
| BlpI | GCTNAGC | 2 cut(s) | 2633, 3462 |
| Bme18I | GGWCC | 4 cut(s) | 61, 750, 1232, 1344 |
| BmeT110I | CYCGRG | 2 cut(s) | 2921, 2943 |
| BmgT120I | GGNCC | 9 cut(s) | 61, 467, 750, 1232, 1344, 2853, 2930, 3009, 3023 |
| BmrI | ACTGGG | 1 cut(s) | 317 |
| BmsI | GCATC | 5 cut(s) | 171, 991, 1609, 2026, 2404 |
| BmtI | GCTAGC | 1 cut(s) | 1502 |
| BmuI | ACTGGG | 1 cut(s) | 317 |
| BpiI | GAAGAC | 3 cut(s) | 666, 1743, 1947 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1925, 1957, 2394, 2426 |
| BpmI | CTGGAG | 7 cut(s) | 501, 584, 867, 1245, 1401, 1425, 2728 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2633, 3462 |
| Bpu14I | TTCGAA | 1 cut(s) | 2753 |
| BpuEI | CTTGAG | 1 cut(s) | 1238 |
| BpuMI | CCSGG | 5 cut(s) | 2851, 2922, 2923, 3206, 3468 |
| BsaAI | YACGTR | 1 cut(s) | 2545 |
| BsaBI | GATNNNNATC | 1 cut(s) | 339 |
| BsaHI | GRCGYC | 1 cut(s) | 3038 |
| BsaI | GGTCTC | 1 cut(s) | 669 |
| BsaWI | WCCGGW | 1 cut(s) | 2485 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 759, 884, 1804, 1920, 2492, 2582, 2927, 3018, 3449 |
| Bse118I | RCCGGY | 3 cut(s) | 2839, 3298, 3409 |
| Bse1I | ACTGG | 7 cut(s) | 312, 611, 1054, 1620, 2056, 2175, 2983 |
| Bse21I | CCTNAGG | 1 cut(s) | 921 |
| Bse3DI | GCAATG | 1 cut(s) | 249 |
| Bse8I | GATNNNNATC | 1 cut(s) | 339 |
| BseAI | TCCGGA | 1 cut(s) | 2485 |
| BseBI | CCWGG | 8 cut(s) | 207, 519, 594, 885, 1144, 2934, 3027, 3478 |
| BseJI | GATNNNNATC | 1 cut(s) | 339 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 759, 884, 1804, 1920, 2492, 2582, 2927, 3018, 3449 |
| BseMI | GCAATG | 1 cut(s) | 249 |
| BseNI | ACTGG | 7 cut(s) | 312, 611, 1054, 1620, 2056, 2175, 2983 |
| BseRI | GAGGAG | 2 cut(s) | 591, 2681 |
| BseSI | GKGCMC | 2 cut(s) | 510, 2658 |
| BseX3I | CGGCCG | 1 cut(s) | 3266 |
| BsgI | GTGCAG | 4 cut(s) | 999, 2205, 2481, 2865 |
| Bsh1236I | CGCG | 2 cut(s) | 700, 3265 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3269 |
| BshNI | GGYRCC | 3 cut(s) | 400, 3037, 3349 |
| BsiEI | CGRYCG | 1 cut(s) | 3269 |
| BsiHKAI | GWGCWC | 1 cut(s) | 510 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2921, 2943 |
| BsiSI | CCGG | 9 cut(s) | 2139, 2486, 2840, 2851, 2922, 3206, 3299, 3410, 3467 |
| BsiWI | CGTACG | 1 cut(s) | 2541 |
| BslFI | GGGAC | 6 cut(s) | 258, 1330, 1953, 2833, 2960, 3043 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 759, 884, 1804, 1920, 2492, 2582, 2927, 3018, 3449 |
| BsmBI | CGTCTC | 1 cut(s) | 1534 |
| BsmFI | GGGAC | 6 cut(s) | 258, 1330, 1953, 2833, 2960, 3043 |
| BsmI | GAATGC | 2 cut(s) | 1714, 2520 |
| Bso31I | GGTCTC | 1 cut(s) | 669 |
| BsoBI | CYCGRG | 2 cut(s) | 2921, 2943 |
| Bsp119I | TTCGAA | 1 cut(s) | 2753 |
| Bsp1286I | GDGCHC | 3 cut(s) | 510, 2658, 3400 |
| Bsp13I | TCCGGA | 1 cut(s) | 2485 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2633, 3462 |
| Bsp19I | CCATGG | 3 cut(s) | 452, 570, 2319 |
| BspEI | TCCGGA | 1 cut(s) | 2485 |
| BspFNI | CGCG | 2 cut(s) | 700, 3265 |
| BspHI | TCATGA | 1 cut(s) | 1075 |
| BspMAI | CTGCAG | 3 cut(s) | 462, 1444, 1717 |
| BspMI | ACCTGC | 3 cut(s) | 1201, 1706, 2887 |
| BspOI | GCTAGC | 1 cut(s) | 1502 |
| BspPI | GGATC | 8 cut(s) | 182, 195, 328, 508, 529, 604, 1221, 1830 |
| BspQI | GCTCTTC | 3 cut(s) | 478, 909, 1488 |
| BspT104I | TTCGAA | 1 cut(s) | 2753 |
| BspT107I | GGYRCC | 3 cut(s) | 400, 3037, 3349 |
| BspTNI | GGTCTC | 1 cut(s) | 669 |
| BsrDI | GCAATG | 1 cut(s) | 249 |
| BsrFI | RCCGGY | 3 cut(s) | 2839, 3298, 3409 |
| BsrI | ACTGG | 7 cut(s) | 312, 611, 1054, 1620, 2056, 2175, 2983 |
| BssAI | RCCGGY | 3 cut(s) | 2839, 3298, 3409 |
| BssNI | GRCGYC | 1 cut(s) | 3038 |
| BssT1I | CCWWGG | 5 cut(s) | 452, 570, 1695, 1863, 2319 |
| Bst2UI | CCWGG | 8 cut(s) | 207, 519, 594, 885, 1144, 2934, 3027, 3478 |
| Bst6I | CTCTTC | 8 cut(s) | 478, 909, 1197, 1260, 1488, 1718, 2395, 3342 |
| BstACI | GRCGYC | 1 cut(s) | 3038 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 589, 2440, 3295 |
| BstBAI | YACGTR | 1 cut(s) | 2545 |
| BstBI | TTCGAA | 1 cut(s) | 2753 |
| BstC8I | GCNNGC | 5 cut(s) | 537, 982, 1500, 2841, 3300 |
| BstDSI | CCRYGG | 7 cut(s) | 23, 452, 570, 698, 2319, 3179, 3263 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1918, 3016 |
| BstFNI | CGCG | 2 cut(s) | 700, 3265 |
| BstH2I | RGCGCY | 1 cut(s) | 3041 |
| BstHHI | GCGC | 3 cut(s) | 583, 3040, 3415 |
| BstMCI | CGRYCG | 1 cut(s) | 3269 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 424, 466, 589, 2440, 3265, 3271, 3295, 3419 |
| BstNI | CCWGG | 8 cut(s) | 207, 519, 594, 885, 1144, 2934, 3027, 3478 |
| BstNSI | RCATGY | 1 cut(s) | 2632 |
| BstSFI | CTRYAG | 5 cut(s) | 458, 489, 1440, 1713, 3078 |
| BstSLI | GKGCMC | 2 cut(s) | 510, 2658 |
| BstSNI | TACGTA | 1 cut(s) | 2545 |
| BstUI | CGCG | 2 cut(s) | 700, 3265 |
| BstV2I | GAAGAC | 3 cut(s) | 666, 1743, 1947 |
| BstX2I | RGATCY | 5 cut(s) | 187, 500, 596, 1213, 1822 |
| BstYI | RGATCY | 5 cut(s) | 187, 500, 596, 1213, 1822 |
| BstZI | CGGCCG | 1 cut(s) | 3266 |
| Bsu36I | CCTNAGG | 1 cut(s) | 921 |
| BsuI | GTATCC | 1 cut(s) | 696 |
| BtgI | CCRYGG | 7 cut(s) | 23, 452, 570, 698, 2319, 3179, 3263 |
| BtgZI | GCGATG | 1 cut(s) | 1053 |
| BtsIMutI | CAGTG | 4 cut(s) | 618, 1613, 2182, 2976 |
| BveI | ACCTGC | 3 cut(s) | 1201, 1706, 2887 |
| Cac8I | GCNNGC | 5 cut(s) | 537, 982, 1500, 2841, 3300 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1943, 2039 |
| CciI | TCATGA | 1 cut(s) | 1075 |
| CciNI | GCGGCCGC | 1 cut(s) | 3266 |
| CfoI | GCGC | 3 cut(s) | 583, 3040, 3415 |
| Cfr10I | RCCGGY | 3 cut(s) | 2839, 3298, 3409 |
| Cfr13I | GGNCC | 9 cut(s) | 61, 467, 750, 1232, 1344, 2853, 2930, 3009, 3023 |
| Cfr42I | CCGCGG | 2 cut(s) | 701, 3266 |
| Cfr9I | CCCGGG | 1 cut(s) | 2921 |
| Csp6I | GTAC | 6 cut(s) | 1961, 2542, 3049, 3224, 3247, 3359 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3374, 3409 |
| CviQI | GTAC | 6 cut(s) | 1961, 2542, 3049, 3224, 3247, 3359 |
| DinI | GGCGCC | 1 cut(s) | 3039 |
| DraI | TTTAAA | 1 cut(s) | 901 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1666, 1745 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1666, 1745 |
| EaeI | YGGCCR | 2 cut(s) | 327, 3266 |
| EagI | CGGCCG | 1 cut(s) | 3266 |
| Eam1104I | CTCTTC | 8 cut(s) | 478, 909, 1197, 1260, 1488, 1718, 2395, 3342 |
| EarI | CTCTTC | 8 cut(s) | 478, 909, 1197, 1260, 1488, 1718, 2395, 3342 |
| EciI | GGCGGA | 2 cut(s) | 1492, 3390 |
| EclXI | CGGCCG | 1 cut(s) | 3266 |
| Eco105I | TACGTA | 1 cut(s) | 2545 |
| Eco130I | CCWWGG | 5 cut(s) | 452, 570, 1695, 1863, 2319 |
| Eco147I | AGGCCT | 1 cut(s) | 1797 |
| Eco24I | GRGCYC | 1 cut(s) | 3400 |
| Eco31I | GGTCTC | 1 cut(s) | 669 |
| Eco32I | GATATC | 2 cut(s) | 1609, 2392 |
| Eco47I | GGWCC | 4 cut(s) | 61, 750, 1232, 1344 |
| Eco52I | CGGCCG | 1 cut(s) | 3266 |
| Eco57I | CTGAAG | 7 cut(s) | 933, 1218, 1512, 1584, 1755, 1794, 1941 |
| Eco81I | CCTNAGG | 1 cut(s) | 921 |
| Eco88I | CYCGRG | 2 cut(s) | 2921, 2943 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1918, 3016 |
| EcoO109I | RGGNCCY | 4 cut(s) | 467, 1344, 3009, 3023 |
| EcoRI | GAATTC | 3 cut(s) | 928, 1049, 2966 |
| EcoRII | CCWGG | 8 cut(s) | 205, 517, 592, 883, 1142, 2932, 3025, 3476 |
| EcoRV | GATATC | 2 cut(s) | 1609, 2392 |
| EcoT14I | CCWWGG | 5 cut(s) | 452, 570, 1695, 1863, 2319 |
| EcoT38I | GRGCYC | 1 cut(s) | 3400 |
| EgeI | GGCGCC | 1 cut(s) | 3039 |
| EheI | GGCGCC | 1 cut(s) | 3039 |
| ErhI | CCWWGG | 5 cut(s) | 452, 570, 1695, 1863, 2319 |
| Esp3I | CGTCTC | 1 cut(s) | 1534 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1104, 1136 |
| FaqI | GGGAC | 6 cut(s) | 258, 1330, 1953, 2833, 2960, 3043 |
| FauNDI | CATATG | 1 cut(s) | 3309 |
| FbaI | TGATCA | 2 cut(s) | 2094, 2118 |
| FblI | GTMKAC | 3 cut(s) | 1670, 1749, 2625 |
| FriOI | GRGCYC | 1 cut(s) | 3400 |
| FspI | TGCGCA | 1 cut(s) | 582 |
| GlaI | GCGC | 3 cut(s) | 582, 3039, 3414 |
| GsuI | CTGGAG | 7 cut(s) | 501, 584, 867, 1245, 1401, 1425, 2728 |
| HaeII | RGCGCY | 1 cut(s) | 3041 |
| HapII | CCGG | 9 cut(s) | 2139, 2486, 2840, 2851, 2922, 3206, 3299, 3410, 3467 |
| HhaI | GCGC | 3 cut(s) | 583, 3040, 3415 |
| Hin1I | GRCGYC | 1 cut(s) | 3038 |
| Hin6I | GCGC | 3 cut(s) | 581, 3038, 3413 |
| HinP1I | GCGC | 3 cut(s) | 581, 3038, 3413 |
| HincII | GTYRAC | 2 cut(s) | 351, 1984 |
| HindII | GTYRAC | 2 cut(s) | 351, 1984 |
| HindIII | AAGCTT | 1 cut(s) | 719 |
| HpaI | GTTAAC | 1 cut(s) | 1984 |
| HpaII | CCGG | 9 cut(s) | 2139, 2486, 2840, 2851, 2922, 3206, 3299, 3410, 3467 |
| HphI | GGTGA | 9 cut(s) | 12, 270, 516, 1580, 1730, 2288, 2307, 2363, 2729 |
| Hpy99I | CGWCG | 4 cut(s) | 2503, 2903, 2906, 2909 |
| HpyCH4IV | ACGT | 6 cut(s) | 1543, 2281, 2544, 2658, 3146, 3357 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 424, 466, 589, 2440, 3265, 3271, 3295, 3419 |
| HpySE526I | ACGT | 6 cut(s) | 1543, 2281, 2544, 2658, 3146, 3357 |
| Hsp92I | GRCGYC | 1 cut(s) | 3038 |
| HspAI | GCGC | 3 cut(s) | 581, 3038, 3413 |
| KasI | GGCGCC | 1 cut(s) | 3037 |
| Kpn2I | TCCGGA | 1 cut(s) | 2485 |
| KroI | GCCGGC | 2 cut(s) | 2839, 3298 |
| KroNI | GCCGGC | 2 cut(s) | 2841, 3300 |
| Ksp22I | TGATCA | 2 cut(s) | 2094, 2118 |
| KspAI | GTTAAC | 1 cut(s) | 1984 |
| KspI | CCGCGG | 2 cut(s) | 701, 3266 |
| LguI | GCTCTTC | 3 cut(s) | 478, 909, 1488 |
| LmnI | GCTCC | 6 cut(s) | 520, 848, 859, 880, 1462, 3403 |
| LweI | GCATC | 5 cut(s) | 171, 991, 1609, 2026, 2404 |
| MaeII | ACGT | 6 cut(s) | 1543, 2281, 2544, 2658, 3146, 3357 |
| MaeIII | GTNAC | 8 cut(s) | 18, 131, 141, 210, 1094, 1903, 2545, 3281 |
| MfeI | CAATTG | 1 cut(s) | 1833 |
| MflI | RGATCY | 5 cut(s) | 187, 500, 596, 1213, 1822 |
| MhlI | GDGCHC | 3 cut(s) | 510, 2658, 3400 |
| MlsI | TGGCCA | 1 cut(s) | 329 |
| MluNI | TGGCCA | 1 cut(s) | 329 |
| Mly113I | GGCGCC | 1 cut(s) | 3038 |
| MlyI | GAGTC | 9 cut(s) | 77, 149, 575, 749, 1922, 2403, 2412, 2546, 2568 |
| MmeI | TCCRAC | 2 cut(s) | 1191, 2481 |
| Mox20I | TGGCCA | 1 cut(s) | 329 |
| MroI | TCCGGA | 1 cut(s) | 2485 |
| MroNI | GCCGGC | 2 cut(s) | 2839, 3298 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1049, 2520 |
| MscI | TGGCCA | 1 cut(s) | 329 |
| MseI | TTAA | 6 cut(s) | 792, 900, 1787, 1983, 2670, 2717 |
| MslI | CAYNNNNRTG | 4 cut(s) | 47, 1080, 1566, 2471 |
| Msp20I | TGGCCA | 1 cut(s) | 329 |
| MspA1I | CMGCKG | 6 cut(s) | 539, 670, 700, 941, 3265, 3274 |
| MspI | CCGG | 9 cut(s) | 2139, 2486, 2840, 2851, 2922, 3206, 3299, 3410, 3467 |
| MunI | CAATTG | 1 cut(s) | 1833 |
| Mva1269I | GAATGC | 2 cut(s) | 1714, 2520 |
| MvaI | CCWGG | 8 cut(s) | 207, 519, 594, 885, 1144, 2934, 3027, 3478 |
| MvnI | CGCG | 2 cut(s) | 700, 3265 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 424, 466, 589, 2440, 3265, 3271, 3295, 3419 |
| NaeI | GCCGGC | 2 cut(s) | 2841, 3300 |
| NarI | GGCGCC | 1 cut(s) | 3038 |
| NciI | CCSGG | 5 cut(s) | 2851, 2922, 2923, 3206, 3468 |
| NcoI | CCATGG | 3 cut(s) | 452, 570, 2319 |
| NdeI | CATATG | 1 cut(s) | 3309 |
| NgoMIV | GCCGGC | 2 cut(s) | 2839, 3298 |
| NheI | GCTAGC | 1 cut(s) | 1498 |
| NmuCI | GTSAC | 4 cut(s) | 18, 141, 210, 1094 |
| NotI | GCGGCCGC | 1 cut(s) | 3266 |
| NsbI | TGCGCA | 1 cut(s) | 582 |
| NspI | RCATGY | 1 cut(s) | 2632 |
| NspV | TTCGAA | 1 cut(s) | 2753 |
| PagI | TCATGA | 1 cut(s) | 1075 |
| PaqCI | CACCTGC | 2 cut(s) | 1706, 2887 |
| PceI | AGGCCT | 1 cut(s) | 1797 |
| PciSI | GCTCTTC | 3 cut(s) | 478, 909, 1488 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 614, 2904 |
| PctI | GAATGC | 2 cut(s) | 1714, 2520 |
| PdiI | GCCGGC | 2 cut(s) | 2841, 3300 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1049, 2520 |
| Pfl23II | CGTACG | 1 cut(s) | 2541 |
| PfoI | TCCNGGA | 2 cut(s) | 517, 3204 |
| PleI | GAGTC | 9 cut(s) | 77, 148, 574, 748, 1922, 2403, 2411, 2545, 2567 |
| PluTI | GGCGCC | 1 cut(s) | 3041 |
| PpsI | GAGTC | 9 cut(s) | 77, 148, 574, 748, 1922, 2403, 2411, 2545, 2567 |
| Ppu21I | YACGTR | 1 cut(s) | 2545 |
| PpuMI | RGGWCCY | 1 cut(s) | 1344 |
| Psp5II | RGGWCCY | 1 cut(s) | 1344 |
| Psp6I | CCWGG | 8 cut(s) | 205, 517, 592, 883, 1142, 2932, 3025, 3476 |
| PspGI | CCWGG | 8 cut(s) | 205, 517, 592, 883, 1142, 2932, 3025, 3476 |
| PspLI | CGTACG | 1 cut(s) | 2541 |
| PspPI | GGNCC | 9 cut(s) | 61, 467, 750, 1232, 1344, 2853, 2930, 3009, 3023 |
| PspPPI | RGGWCCY | 1 cut(s) | 1344 |
| PstI | CTGCAG | 3 cut(s) | 462, 1444, 1717 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1943, 2039 |
| PsuI | RGATCY | 5 cut(s) | 187, 500, 596, 1213, 1822 |
| PvuII | CAGCTG | 1 cut(s) | 539 |
| RsaI | GTAC | 6 cut(s) | 1962, 2543, 3050, 3225, 3248, 3360 |
| RsaNI | GTAC | 6 cut(s) | 1961, 2542, 3049, 3224, 3247, 3359 |
| RseI | CAYNNNNRTG | 4 cut(s) | 47, 1080, 1566, 2471 |
| SacII | CCGCGG | 2 cut(s) | 701, 3266 |
| SapI | GCTCTTC | 3 cut(s) | 478, 909, 1488 |
| SaqAI | TTAA | 6 cut(s) | 792, 900, 1787, 1983, 2670, 2717 |
| Sau96I | GGNCC | 9 cut(s) | 61, 467, 750, 1232, 1344, 2853, 2930, 3009, 3023 |
| SchI | GAGTC | 9 cut(s) | 77, 149, 575, 749, 1922, 2403, 2412, 2546, 2568 |
| SduI | GDGCHC | 3 cut(s) | 510, 2658, 3400 |
| SfaNI | GCATC | 5 cut(s) | 171, 991, 1609, 2026, 2404 |
| SfcI | CTRYAG | 5 cut(s) | 458, 489, 1440, 1713, 3078 |
| SfoI | GGCGCC | 1 cut(s) | 3039 |
| Sfr303I | CCGCGG | 2 cut(s) | 701, 3266 |
| SfuI | TTCGAA | 1 cut(s) | 2753 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3409 |
| SgrBI | CCGCGG | 2 cut(s) | 701, 3266 |
| SinI | GGWCC | 4 cut(s) | 61, 750, 1232, 1344 |
| SmaI | CCCGGG | 1 cut(s) | 2923 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 47, 1080, 1566, 2471 |
| SmlI | CTYRAG | 1 cut(s) | 1217 |
| SmoI | CTYRAG | 1 cut(s) | 1217 |
| SnaBI | TACGTA | 1 cut(s) | 2545 |
| SpeI | ACTAGT | 1 cut(s) | 2257 |
| SseBI | AGGCCT | 1 cut(s) | 1797 |
| SspDI | GGCGCC | 1 cut(s) | 3037 |
| SspI | AATATT | 1 cut(s) | 1066 |
| StuI | AGGCCT | 1 cut(s) | 1797 |
| StyI | CCWWGG | 5 cut(s) | 452, 570, 1695, 1863, 2319 |
| TaiI | ACGT | 6 cut(s) | 1546, 2284, 2547, 2661, 3149, 3360 |
| TaqI | TCGA | 6 cut(s) | 715, 1884, 1949, 2412, 2753, 2987 |
| TauI | GCSGC | 7 cut(s) | 776, 3038, 3268, 3271, 3274, 3331, 3484 |
| Tru1I | TTAA | 6 cut(s) | 792, 900, 1787, 1983, 2670, 2717 |
| Tru9I | TTAA | 6 cut(s) | 792, 900, 1787, 1983, 2670, 2717 |
| TscAI | CASTG | 4 cut(s) | 618, 1620, 2182, 2983 |
| TseFI | GTSAC | 4 cut(s) | 18, 141, 210, 1094 |
| Tsp45I | GTSAC | 4 cut(s) | 18, 141, 210, 1094 |
| TspGWI | ACGGA | 4 cut(s) | 733, 2522, 2564, 3168 |
| TspMI | CCCGGG | 1 cut(s) | 2921 |
| TspRI | CASTG | 4 cut(s) | 618, 1620, 2182, 2983 |
| VneI | GTGCAC | 1 cut(s) | 506 |
| VpaK11BI | GGWCC | 4 cut(s) | 61, 750, 1232, 1344 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1918, 3016 |
| XapI | RAATTY | 8 cut(s) | 98, 285, 928, 1049, 1185, 2592, 2966, 3364 |
| XbaI | TCTAGA | 2 cut(s) | 821, 2252 |
| XceI | RCATGY | 1 cut(s) | 2632 |
| XmaI | CCCGGG | 1 cut(s) | 2921 |
| XmiI | GTMKAC | 3 cut(s) | 1670, 1749, 2625 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1049, 2520 |