Rroxscaffold_7G00156490

Transcription factor S-II (TFIIS), central domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0002519
Physical Location & Seq
Forward (+)
338706 .. 342479
3774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00156490.1

Sequence Viewer

Length: 2364 bp
ATGCAACCATCTCCAAAGGCTCAAAATGAATCATTTGAATCTGTAAGGTCCAAGATGAGGGAAACATTAGCTGCTGCTTTGGCTTTGGTTAATCAGCAGCAAGATAAATCTCCAGAATCAGAAAACAAGTTTCAGGGGAAAACACAGGAGAGTTCTGGGCCTGTTAAACATGAATTTAAAGAAGAGCCCAAGGAGACTTTTCCTTCCGGTGAAACTTGTTCCACTCTGAAAAGCAACATTGCAGAAAGTGCTGGCCAAAGCATTATGTCCAATGCAAATACTAGTGATTCTACATTGGCCTCAATATGTGAAGGGAAGGAGTTCCAATCAAGTAGTATTTTGCCTTATGATGTTTCATTTGGTGATAACTTGTTTGTCAAAGATGAACTTTTGCAGGGAAACGGGCTTTCCTGGGTACTGGATTCTGATATTGAAATGGCTGACAGAAATGAAATTCCTGCTGCTGTAAAACAAGAGTCAGATCAAGAGATGAGACATCCAGAAGAACAAGCGGTTCAATCTCTTGAACAGGTGGCAGTTCAATCTCCAGAACAGCTGGCCTTTGAAATTGAAGCAGAACTATTCAAATTATTTGAGGAACTTGCTTCAAAGGAGCTTTCTGAGTGGCGGATGGCAAAGGCAGAAGAGCTTGCACAAATGGTAGTTTTACCTGATTCAGAACTTGATATGAGACGCTTAGTGAAGAAAACACACAAGGGTGAAGTTGAAGTTGAACAATATGATAACACTCCAATGGAGGTCCCAATCTCACACGATCAGGGCCAACCGAAAAGCAAGGAGACAGAAGTATCTACCCCTCTGAAATCTGTTAAGCCCAGGAACGAGGTCAAAGCTCGACGCCAAAGTAATGAGTTCATGGAATCCTTGGATAATGAGCCACCGTTTGAGATTCCACCTGAGAAACCGTCACCCATCTCAGAAAAGGAGAACTCAGAGACTGGCTCAGAATCAAAGTCTTCTCGTTTAAGTCCCAAAGATTCTGTTCATTCTTCCTCTCCAAAACGTGATGAAATTGATGCAACAGATTTAAAGCCTGAAGCTGTTATCAAAGCTGAAGACAATCCTGCTGTGATAAAAACCAGTGCCAGTGCTGGTGTGAAGTCCGGTGACACTATTGCTGATGTGAAGTCCGGTGACACTATCGCTGATGTGAAGTCCAGTGACAGTCTTGAAAACACAGAATCTACACCTGTTCAGAAACCCAAGGGCGAAACATGTGTGGGGAGGTCTTATGGCCCAACGGTGAAAAAAACCTCCGCAAAAGACTGGCCTGGGTCTCTTGAGATCAAGGGCAGAGTCAGGCTCGATGCTTTTGAGAAATTCCTGCAAGAGCTTCCCTCAATCCCGAAGTCGTGCTGTTATGTGTGGGCTCTCCCTTTGGGGAACATGTACCTGTTGTTTGACTTGGTGAATATACGGTTGTGCATTTTGTTCTTAAAGCGGGGGTCGTCAGAGACTGAATCTGCAAGCCTTCATGAGGTCCGAGATTCTTATATTTCAGATGAGAGAGTGGGTTTTGCTGAGCCTTGTTCTGGTGTTGAACTATATTTTTGCCCACCCCATAATAAAACTTGTGACATGCTCAGCAAGATCATTCAGAAGGAACACGTTGAGGCACTGAACACTATTGATAATGGCCTTATTGGTGTTATTGTGTGGAGAAAGTTAACTTCCCCTAAATCATCTTCGCACCAGAAACACGCTTCAAAAAAGCAACACTATAGTAGTTCTACTTCTAGGAGGCATCATGATACAAATTCGAATGCCAATTACAATTCCAAACCTTCCCAGCCTAGGGTCTTTCCTCCCACCCATACTAATGTAACACATGATGATGAGGAGGACGAAGTTCCTCCTGGATTTGGTCCTCCGGCTTCCCGGGACGATGATGACCTTCCTGAATTCAATTATAGTGGTGCGTCAAACCCGTCTGTGCCACAGTTTTCTACCCAAGGGTCCTCTAGGGGGCCTGGGATGTACCCCGAGTCTCAGACTCCTCGCCCTCCAAATCCAACCCCATCCCAGTACCAGCGGCCACAGCTACAACCAGTGAACAACTACCAGCAACCAATGCTGCGAGCCCATATAGGTTCTCCACTTCAGCAGCAGCCATTGCAAACCCTGCAACCCCAAATGCATGTGGCATCAGGCTTACAGGCTCCTAGTCCTTATTGGCAGCAAGGGAATCAGTGGGCTCCTCCTCCACAGAGTGGCAGCGTGTGGGCGACTAATGTAGCTTGTCAGCCAGAATCAGGGCAGTTTTATGGAGAACCTGATAGAGGAACAGCAGGTCAGCCGGGAATAGCCTGGCGACAGAACGCCCCTAGAAGTAGAGGGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0007275 GO:0008150 GO:0032501 GO:0032502 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SPOC TFIIS_M

Protein Analysis

787

Amino Acids

87.07

Weight (kDa)

5.18

Isoelectric Point (pI)

62.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPOC PF07744 426 - 561 1.5e-16 SPOC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2300
AccB7I CCANNNNNTGG 1 cut(s) 2231
AciI CCGC 5 cut(s) 512, 628, 1278, 1462, 2053
AcoI YGGCCR 2 cut(s) 253, 2054
AcsI RAATTY 5 cut(s) 173, 453, 1340, 1777, 1922
AcuI CTGAAG 3 cut(s) 1077, 1095, 2105
AcyI GRCGYC 1 cut(s) 859
AdeI CACNNNGTG 1 cut(s) 2231
AfaI GTAC 4 cut(s) 417, 1412, 2000, 2048
AflIII ACRYGT 3 cut(s) 1235, 1407, 1627
AhlI ACTAGT 1 cut(s) 281
AjnI CCWGG 6 cut(s) 410, 836, 1291, 1876, 1990, 2327
AleI CACNNNNGTG 1 cut(s) 717
Alw26I GTCTC 8 cut(s) 188, 487, 685, 794, 950, 1302, 1469, 2013
AlwNI CAGNNNCTG 2 cut(s) 959, 1478
Ama87I CYCGRG 2 cut(s) 1899, 2003
ApeKI GCWGC 9 cut(s) 71, 74, 97, 461, 2095, 2125, 2128, 2197, 2235
ApoI RAATTY 5 cut(s) 173, 453, 1340, 1777, 1922
Asp700I GAANNNNTTC 1 cut(s) 320
AspA2I CCTAGG 1 cut(s) 1814
AspS9I GGNCC 9 cut(s) 48, 158, 760, 781, 1256, 1501, 1886, 1977, 1988
AsuC2I CCSGG 3 cut(s) 1900, 1901, 2319
AsuHPI GGTGA 8 cut(s) 221, 374, 731, 921, 1139, 1166, 1276, 1441
AsuII TTCGAA 1 cut(s) 1781
AvaI CYCGRG 2 cut(s) 1899, 2003
AvaII GGWCC 5 cut(s) 48, 760, 1501, 1886, 1977
AvrII CCTAGG 1 cut(s) 1814
BaeI ACNNNNGTAYC 2 cut(s) 792, 825
BalI TGGCCA 1 cut(s) 255
BanII GRGCYC 4 cut(s) 189, 1393, 2104, 2218
BarI GAAGNNNNNNTAC 2 cut(s) 1738, 1770
BbsI GAAGAC 2 cut(s) 969, 1083
BbvI GCAGC 9 cut(s) 58, 61, 109, 448, 2082, 2137, 2140, 2209, 2247
BccI CCATC 4 cut(s) 16, 625, 941, 2047
BciT130I CCWGG 6 cut(s) 412, 838, 1293, 1878, 1992, 2329
BcnI CCSGG 3 cut(s) 1900, 1901, 2319
BcoDI GTCTC 8 cut(s) 188, 487, 685, 794, 950, 1302, 1469, 2013
BcuI ACTAGT 1 cut(s) 281
BfaI CTAG 6 cut(s) 282, 1758, 1815, 1983, 2184, 2346
BfmI CTRYAG 1 cut(s) 1741
BfuAI ACCTGC 1 cut(s) 2300
BlnI CCTAGG 1 cut(s) 1814
BlpI GCTNAGC 2 cut(s) 1542, 1604
Bme1390I CCNGG 9 cut(s) 412, 838, 1293, 1878, 1900, 1901, 1992, 2319, 2329
Bme18I GGWCC 5 cut(s) 48, 760, 1501, 1886, 1977
BmeT110I CYCGRG 2 cut(s) 1899, 2003
BmgT120I GGNCC 9 cut(s) 48, 158, 760, 781, 1256, 1501, 1886, 1977, 1988
BmiI GGNNCC 5 cut(s) 762, 1978, 1989, 2181, 2217
BmrFI CCNGG 9 cut(s) 412, 838, 1293, 1878, 1900, 1901, 1992, 2319, 2329
BmrI ACTGGG 1 cut(s) 2038
BmsI GCATC 4 cut(s) 1027, 1318, 1774, 2174
BmuI ACTGGG 1 cut(s) 2038
BpiI GAAGAC 2 cut(s) 969, 1083
BplI GAGNNNNNCTC 6 cut(s) 947, 979, 1308, 1340, 1343, 1375
BpmI CTGGAG 2 cut(s) 96, 531
Bpu1102I GCTNAGC 2 cut(s) 1542, 1604
Bpu14I TTCGAA 1 cut(s) 1781
BpuEI CTTGAG 1 cut(s) 1322
BpuMI CCSGG 3 cut(s) 1900, 1901, 2319
BsaHI GRCGYC 1 cut(s) 859
BsaI GGTCTC 1 cut(s) 1302
BsaWI WCCGGW 3 cut(s) 206, 1124, 1151
Bse1I ACTGG 8 cut(s) 423, 964, 1101, 1107, 1179, 1292, 2044, 2069
Bse3DI GCAATG 2 cut(s) 237, 2132
BseBI CCWGG 6 cut(s) 412, 838, 1293, 1878, 1992, 2329
BseGI GGATG 4 cut(s) 496, 636, 2001, 2039
BseMI GCAATG 2 cut(s) 237, 2132
BseMII CTCAG 8 cut(s) 612, 909, 951, 966, 978, 1533, 1618, 2024
BseNI ACTGG 8 cut(s) 423, 964, 1101, 1107, 1179, 1292, 2044, 2069
BseRI GAGGAG 4 cut(s) 1874, 2007, 2208, 2211
BseXI GCAGC 9 cut(s) 58, 61, 109, 448, 2082, 2137, 2140, 2209, 2247
BseYI CCCAGC 1 cut(s) 1809
BsiHKCI CYCGRG 2 cut(s) 1899, 2003
BsiSI CCGG 6 cut(s) 207, 1125, 1152, 1892, 1900, 2318
BslFI GGGAC 3 cut(s) 746, 975, 1916
BsmAI GTCTC 8 cut(s) 188, 487, 685, 794, 950, 1302, 1469, 2013
BsmBI CGTCTC 1 cut(s) 685
BsmFI GGGAC 3 cut(s) 746, 975, 1916
BsmI GAATGC 1 cut(s) 1789
Bso31I GGTCTC 1 cut(s) 1302
BsoBI CYCGRG 2 cut(s) 1899, 2003
Bsp119I TTCGAA 1 cut(s) 1781
Bsp1286I GDGCHC 4 cut(s) 189, 1393, 2104, 2218
Bsp143I GATC 4 cut(s) 481, 775, 1305, 1611
Bsp1720I GCTNAGC 2 cut(s) 1542, 1604
BspACI CCGC 5 cut(s) 512, 628, 1278, 1462, 2053
BspCNI CTCAG 8 cut(s) 613, 910, 950, 965, 977, 1534, 1617, 2023
BspHI TCATGA 2 cut(s) 1495, 1768
BspLI GGNNCC 5 cut(s) 762, 1978, 1989, 2181, 2217
BspMI ACCTGC 1 cut(s) 2300
BspQI GCTCTTC 2 cut(s) 177, 639
BspT104I TTCGAA 1 cut(s) 1781
BspTNI GGTCTC 1 cut(s) 1302
BsrDI GCAATG 2 cut(s) 237, 2132
BsrI ACTGG 8 cut(s) 423, 964, 1101, 1107, 1179, 1292, 2044, 2069
BssMI GATC 4 cut(s) 481, 775, 1305, 1611
BssNI GRCGYC 1 cut(s) 859
BssT1I CCWWGG 5 cut(s) 189, 885, 1224, 1814, 1972
Bst2UI CCWGG 6 cut(s) 412, 838, 1293, 1878, 1992, 2329
Bst4CI ACNGT 6 cut(s) 903, 927, 1187, 1264, 1440, 1962
Bst6I CTCTTC 2 cut(s) 177, 639
BstACI GRCGYC 1 cut(s) 859
BstAPI GCANNNNNTGC 4 cut(s) 248, 2092, 2134, 2143
BstBI TTCGAA 1 cut(s) 1781
BstC8I GCNNGC 5 cut(s) 253, 558, 651, 1489, 2100
BstDEI CTNAG 9 cut(s) 621, 697, 918, 937, 952, 964, 1542, 1604, 2010
BstENI CCTNNNNNAGG 2 cut(s) 1496, 2298
BstF5I GGATG 4 cut(s) 496, 636, 2001, 2039
BstKTI GATC 4 cut(s) 484, 778, 1308, 1614
BstMAI GTCTC 8 cut(s) 188, 487, 685, 794, 950, 1302, 1469, 2013
BstMBI GATC 4 cut(s) 481, 775, 1305, 1611
BstMWI GCNNNNNNNGC 6 cut(s) 80, 248, 2059, 2092, 2134, 2143
BstNI CCWGG 6 cut(s) 412, 838, 1293, 1878, 1992, 2329
BstNSI RCATGY 4 cut(s) 1239, 1411, 1603, 2162
BstSCI CCNGG 9 cut(s) 410, 836, 1291, 1876, 1898, 1899, 1990, 2317, 2327
BstSFI CTRYAG 1 cut(s) 1741
BstV1I GCAGC 9 cut(s) 58, 61, 109, 448, 2082, 2137, 2140, 2209, 2247
BstV2I GAAGAC 2 cut(s) 969, 1083
BtsCI GGATG 4 cut(s) 496, 636, 2001, 2039
BtsIMutI CAGTG 6 cut(s) 1108, 1114, 1186, 1637, 2076, 2216
BveI ACCTGC 1 cut(s) 2300
Cac8I GCNNGC 5 cut(s) 253, 558, 651, 1489, 2100
CaiI CAGNNNCTG 2 cut(s) 959, 1478
CciI TCATGA 2 cut(s) 1495, 1768
Cfr13I GGNCC 9 cut(s) 48, 158, 760, 781, 1256, 1501, 1886, 1977, 1988
Cfr9I CCCGGG 1 cut(s) 1899
CseI GACGC 3 cut(s) 702, 867, 1929
Csp6I GTAC 4 cut(s) 416, 1411, 1999, 2047
CspCI CAANNNNNGTGG 2 cut(s) 1915, 1950
CviAII CATG 9 cut(s) 170, 877, 1236, 1408, 1496, 1600, 1769, 1850, 2159
CviQI GTAC 4 cut(s) 416, 1411, 1999, 2047
DdeI CTNAG 9 cut(s) 621, 697, 918, 937, 952, 964, 1542, 1604, 2010
DpnI GATC 4 cut(s) 483, 777, 1307, 1613
DpnII GATC 4 cut(s) 481, 775, 1305, 1611
DraI TTTAAA 2 cut(s) 178, 1050
DraIII CACNNNGTG 1 cut(s) 2231
EaeI YGGCCR 2 cut(s) 253, 2054
Eam1104I CTCTTC 2 cut(s) 177, 639
EarI CTCTTC 2 cut(s) 177, 639
EciI GGCGGA 1 cut(s) 643
Eco130I CCWWGG 5 cut(s) 189, 885, 1224, 1814, 1972
Eco24I GRGCYC 4 cut(s) 189, 1393, 2104, 2218
Eco31I GGTCTC 1 cut(s) 1302
Eco47I GGWCC 5 cut(s) 48, 760, 1501, 1886, 1977
Eco57I CTGAAG 3 cut(s) 1077, 1095, 2105
Eco88I CYCGRG 2 cut(s) 1899, 2003
EcoNI CCTNNNNNAGG 2 cut(s) 1496, 2298
EcoO109I RGGNCCY 3 cut(s) 760, 1977, 1988
EcoRI GAATTC 1 cut(s) 1922
EcoRII CCWGG 6 cut(s) 410, 836, 1291, 1876, 1990, 2327
EcoT14I CCWWGG 5 cut(s) 189, 885, 1224, 1814, 1972
EcoT22I ATGCAT 1 cut(s) 2160
EcoT38I GRGCYC 4 cut(s) 189, 1393, 2104, 2218
ErhI CCWWGG 5 cut(s) 189, 885, 1224, 1814, 1972
Esp3I CGTCTC 1 cut(s) 685
FaeI CATG 9 cut(s) 173, 880, 1239, 1411, 1499, 1603, 1772, 1853, 2162
FalI AAGNNNNNCTT 2 cut(s) 372, 404
FaqI GGGAC 3 cut(s) 746, 975, 1916
FatI CATG 9 cut(s) 169, 876, 1235, 1407, 1495, 1599, 1768, 1849, 2158
FauI CCCGC 1 cut(s) 1455
FokI GGATG 4 cut(s) 483, 643, 2008, 2026
FriOI GRGCYC 4 cut(s) 189, 1393, 2104, 2218
FspBI CTAG 6 cut(s) 282, 1758, 1815, 1983, 2184, 2346
GsaI CCCAGC 1 cut(s) 1813
GsuI CTGGAG 2 cut(s) 96, 531
HapII CCGG 6 cut(s) 207, 1125, 1152, 1892, 1900, 2318
HgaI GACGC 3 cut(s) 702, 867, 1929
Hin1I GRCGYC 1 cut(s) 859
Hin1II CATG 9 cut(s) 173, 880, 1239, 1411, 1499, 1603, 1772, 1853, 2162
HincII GTYRAC 1 cut(s) 1689
HindII GTYRAC 1 cut(s) 1689
HpaI GTTAAC 1 cut(s) 1689
HpaII CCGG 6 cut(s) 207, 1125, 1152, 1892, 1900, 2318
HphI GGTGA 8 cut(s) 221, 374, 731, 921, 1139, 1166, 1276, 1441
Hpy166II GTNNAC 2 cut(s) 1689, 2074
Hpy8I GTNNAC 2 cut(s) 1689, 2074
Hpy99I CGWCG 1 cut(s) 861
HpyAV CCTTC 7 cut(s) 213, 305, 310, 1502, 1615, 1815, 1925
HpyCH4III ACNGT 6 cut(s) 903, 927, 1187, 1264, 1440, 1962
HpyCH4IV ACGT 2 cut(s) 1024, 1629
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 248, 2059, 2092, 2134, 2143
HpyF3I CTNAG 9 cut(s) 621, 697, 918, 937, 952, 964, 1542, 1604, 2010
HpySE526I ACGT 2 cut(s) 1024, 1629
Hsp92I GRCGYC 1 cut(s) 859
Hsp92II CATG 9 cut(s) 173, 880, 1239, 1411, 1499, 1603, 1772, 1853, 2162
KspAI GTTAAC 1 cut(s) 1689
Kzo9I GATC 4 cut(s) 481, 775, 1305, 1611
LguI GCTCTTC 2 cut(s) 177, 639
LmnI GCTCC 3 cut(s) 613, 2185, 2221
Lsp1109I GCAGC 9 cut(s) 58, 61, 109, 448, 2082, 2137, 2140, 2209, 2247
LweI GCATC 4 cut(s) 1027, 1318, 1774, 2174
MaeI CTAG 6 cut(s) 282, 1758, 1815, 1983, 2184, 2346
MaeII ACGT 2 cut(s) 1024, 1629
MaeIII GTNAC 6 cut(s) 927, 1127, 1154, 1181, 1595, 1843
MalI GATC 4 cut(s) 483, 777, 1307, 1613
MboI GATC 4 cut(s) 481, 775, 1305, 1611
MboII GAAGA 8 cut(s) 194, 515, 656, 715, 969, 1002, 1088, 1698
MhlI GDGCHC 4 cut(s) 189, 1393, 2104, 2218
MlsI TGGCCA 1 cut(s) 255
MluNI TGGCCA 1 cut(s) 255
MlyI GAGTC 4 cut(s) 485, 1326, 2008, 2015
MmeI TCCRAC 1 cut(s) 2057
Mox20I TGGCCA 1 cut(s) 255
Mph1103I ATGCAT 1 cut(s) 2160
MroXI GAANNNNTTC 1 cut(s) 320
MscI TGGCCA 1 cut(s) 255
MseI TTAA 9 cut(s) 90, 165, 177, 831, 986, 1049, 1457, 1688, 2362
MslI CAYNNNNRTG 4 cut(s) 717, 752, 1839, 1854
Msp20I TGGCCA 1 cut(s) 255
MspA1I CMGCKG 2 cut(s) 556, 2053
MspI CCGG 6 cut(s) 207, 1125, 1152, 1892, 1900, 2318
MspR9I CCNGG 9 cut(s) 412, 838, 1293, 1878, 1900, 1901, 1992, 2319, 2329
Mva1269I GAATGC 1 cut(s) 1789
MvaI CCWGG 6 cut(s) 412, 838, 1293, 1878, 1992, 2329
MwoI GCNNNNNNNGC 6 cut(s) 80, 248, 2059, 2092, 2134, 2143
NciI CCSGG 3 cut(s) 1900, 1901, 2319
NdeII GATC 4 cut(s) 481, 775, 1305, 1611
NlaIII CATG 9 cut(s) 173, 880, 1239, 1411, 1499, 1603, 1772, 1853, 2162
NlaIV GGNNCC 5 cut(s) 762, 1978, 1989, 2181, 2217
NmuCI GTSAC 5 cut(s) 927, 1127, 1154, 1181, 1595
NsiI ATGCAT 1 cut(s) 2160
NspI RCATGY 4 cut(s) 1239, 1411, 1603, 2162
NspV TTCGAA 1 cut(s) 1781
OliI CACNNNNGTG 1 cut(s) 717
PagI TCATGA 2 cut(s) 1495, 1768
PciI ACATGT 2 cut(s) 1235, 1407
PciSI GCTCTTC 2 cut(s) 177, 639
PctI GAATGC 1 cut(s) 1789
PdmI GAANNNNTTC 1 cut(s) 320
PflMI CCANNNNNTGG 1 cut(s) 2231
PfoI TCCNGGA 1 cut(s) 1876
PleI GAGTC 4 cut(s) 484, 1325, 2008, 2014
PpsI GAGTC 4 cut(s) 484, 1325, 2008, 2014
PpuMI RGGWCCY 2 cut(s) 760, 1977
PscI ACATGT 2 cut(s) 1235, 1407
Psp5II RGGWCCY 2 cut(s) 760, 1977
Psp6I CCWGG 6 cut(s) 410, 836, 1291, 1876, 1990, 2327
PspFI CCCAGC 1 cut(s) 1809
PspGI CCWGG 6 cut(s) 410, 836, 1291, 1876, 1990, 2327
PspN4I GGNNCC 5 cut(s) 762, 1978, 1989, 2181, 2217
PspPI GGNCC 9 cut(s) 48, 158, 760, 781, 1256, 1501, 1886, 1977, 1988
PspPPI RGGWCCY 2 cut(s) 760, 1977
PstNI CAGNNNCTG 2 cut(s) 959, 1478
PvuII CAGCTG 1 cut(s) 556
RsaI GTAC 4 cut(s) 417, 1412, 2000, 2048
RsaNI GTAC 4 cut(s) 416, 1411, 1999, 2047
RseI CAYNNNNRTG 4 cut(s) 717, 752, 1839, 1854
SapI GCTCTTC 2 cut(s) 177, 639
SaqAI TTAA 9 cut(s) 90, 165, 177, 831, 986, 1049, 1457, 1688, 2362
Sau3AI GATC 4 cut(s) 481, 775, 1305, 1611
Sau96I GGNCC 9 cut(s) 48, 158, 760, 781, 1256, 1501, 1886, 1977, 1988
SchI GAGTC 4 cut(s) 485, 1326, 2008, 2015
ScrFI CCNGG 9 cut(s) 412, 838, 1293, 1878, 1900, 1901, 1992, 2319, 2329
SduI GDGCHC 4 cut(s) 189, 1393, 2104, 2218
SfaNI GCATC 4 cut(s) 1027, 1318, 1774, 2174
SfcI CTRYAG 1 cut(s) 1741
SfuI TTCGAA 1 cut(s) 1781
SinI GGWCC 5 cut(s) 48, 760, 1501, 1886, 1977
SmaI CCCGGG 1 cut(s) 1901
SmiMI CAYNNNNRTG 4 cut(s) 717, 752, 1839, 1854
SmlI CTYRAG 1 cut(s) 1301
SmoI CTYRAG 1 cut(s) 1301
SpeI ACTAGT 1 cut(s) 281
SsiI CCGC 5 cut(s) 512, 628, 1278, 1462, 2053
SspMI CTAG 6 cut(s) 282, 1758, 1815, 1983, 2184, 2346
StyD4I CCNGG 9 cut(s) 410, 836, 1291, 1876, 1898, 1899, 1990, 2317, 2327
StyI CCWWGG 5 cut(s) 189, 885, 1224, 1814, 1972
TaaI ACNGT 6 cut(s) 903, 927, 1187, 1264, 1440, 1962
TaiI ACGT 2 cut(s) 1027, 1632
TaqI TCGA 3 cut(s) 856, 1326, 1781
TauI GCSGC 1 cut(s) 2056
Tru1I TTAA 9 cut(s) 90, 165, 177, 831, 986, 1049, 1457, 1688, 2362
Tru9I TTAA 9 cut(s) 90, 165, 177, 831, 986, 1049, 1457, 1688, 2362
TscAI CASTG 6 cut(s) 1108, 1114, 1186, 1644, 2076, 2216
TseFI GTSAC 5 cut(s) 927, 1127, 1154, 1181, 1595
TseI GCWGC 9 cut(s) 71, 74, 97, 461, 2095, 2125, 2128, 2197, 2235
Tsp45I GTSAC 5 cut(s) 927, 1127, 1154, 1181, 1595
TspDTI ATGAA 9 cut(s) 42, 186, 345, 399, 465, 865, 995, 1044, 1484
TspMI CCCGGG 1 cut(s) 1899
TspRI CASTG 6 cut(s) 1108, 1114, 1186, 1644, 2076, 2216
Van91I CCANNNNNTGG 1 cut(s) 2231
VpaK11BI GGWCC 5 cut(s) 48, 760, 1501, 1886, 1977
XagI CCTNNNNNAGG 2 cut(s) 1496, 2298
XapI RAATTY 5 cut(s) 173, 453, 1340, 1777, 1922
XceI RCATGY 4 cut(s) 1239, 1411, 1603, 2162
XmaI CCCGGG 1 cut(s) 1899
XmaJI CCTAGG 1 cut(s) 1814
XmnI GAANNNNTTC 1 cut(s) 320
XspI CTAG 6 cut(s) 282, 1758, 1815, 1983, 2184, 2346
Zsp2I ATGCAT 1 cut(s) 2160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.