Transcription factor S-II (TFIIS), central domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29639 AT3G29639 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G11430 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 AT5G25520 |
| fragaria_vesca | FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 FvH4_2g30140 |
| malus_domestica | MD08G1136900.v1.1 MD15G1115600.v1.1 |
| prunus_persica | Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 Prupe.7G018800_v2.0.a1 |
| pyrus_communis | pycom08g11560 pycom15g10420 |
| rosa_chinensis | RchiOBHm_Chr6g0312791 |
| rosa_laevigata | RLG00000010299 |
| rosa_multiflora | Rmu_sc0008049.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00156490 |
| rosa_rugosa | Rorug06G0399700 |
| rosa_samantha | Rh6AG516700 Rh6BG528000 Rh6CG532800 Rh6DG519000 Rh6DG519100 |
| rosa_wichuraiana | Rw6G044880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3251 |
| AccB1I | GGYRCC | 1 cut(s) | 364 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3182 |
| AclWI | GGATC | 2 cut(s) | 148, 337 |
| AcoI | YGGCCR | 3 cut(s) | 504, 877, 3002 |
| AcsI | RAATTY | 4 cut(s) | 797, 1077, 2626, 2771 |
| AcuI | CTGAAG | 3 cut(s) | 1944, 1962, 3053 |
| AcyI | GRCGYC | 1 cut(s) | 1618 |
| AdeI | CACNNNGTG | 1 cut(s) | 3182 |
| AfaI | GTAC | 3 cut(s) | 1041, 2849, 2996 |
| AflIII | ACRYGT | 1 cut(s) | 2476 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3132 |
| AhlI | ACTAGT | 2 cut(s) | 194, 905 |
| AjnI | CCWGG | 9 cut(s) | 136, 391, 514, 1034, 1595, 2197, 2725, 2839, 3278 |
| AleI | CACNNNNGTG | 1 cut(s) | 1476 |
| Alw21I | GWGCWC | 1 cut(s) | 514 |
| AlwI | GGATC | 2 cut(s) | 148, 337 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 154, 1826, 2327 |
| Ama87I | CYCGRG | 3 cut(s) | 2207, 2748, 2852 |
| ApoI | RAATTY | 4 cut(s) | 797, 1077, 2626, 2771 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 118, 944 |
| AspA2I | CCTAGG | 1 cut(s) | 2663 |
| AspLEI | GCGC | 1 cut(s) | 466 |
| AsuC2I | CCSGG | 3 cut(s) | 2749, 2750, 3270 |
| AsuHPI | GGTGA | 8 cut(s) | 845, 998, 1490, 1788, 2006, 2033, 2060, 2183 |
| AsuII | TTCGAA | 1 cut(s) | 2630 |
| AvaI | CYCGRG | 3 cut(s) | 2207, 2748, 2852 |
| AvaII | GGWCC | 6 cut(s) | 134, 672, 1254, 1519, 2350, 2826 |
| AvrII | CCTAGG | 1 cut(s) | 2663 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1551, 1584 |
| BalI | TGGCCA | 2 cut(s) | 506, 879 |
| BanI | GGYRCC | 1 cut(s) | 364 |
| BanII | GRGCYC | 4 cut(s) | 86, 813, 3052, 3166 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2587, 2619 |
| BbsI | GAAGAC | 2 cut(s) | 588, 1836 |
| Bbv12I | GWGCWC | 1 cut(s) | 514 |
| BbvCI | CCTCAGC | 1 cut(s) | 588 |
| BccI | CCATC | 8 cut(s) | 166, 553, 640, 929, 1384, 1658, 1694, 2995 |
| BceAI | ACGGC | 1 cut(s) | 2907 |
| BciT130I | CCWGG | 9 cut(s) | 138, 393, 516, 1036, 1597, 2199, 2727, 2841, 3280 |
| BclI | TGATCA | 1 cut(s) | 1534 |
| BcnI | CCSGG | 3 cut(s) | 2749, 2750, 3270 |
| BcuI | ACTAGT | 2 cut(s) | 194, 905 |
| BfmI | CTRYAG | 3 cut(s) | 1350, 2590, 2874 |
| BfoI | RGCGCY | 1 cut(s) | 467 |
| BfuAI | ACCTGC | 1 cut(s) | 3251 |
| BglII | AGATCT | 2 cut(s) | 578, 1711 |
| BlnI | CCTAGG | 1 cut(s) | 2663 |
| BlpI | GCTNAGC | 2 cut(s) | 2391, 2453 |
| Bme18I | GGWCC | 6 cut(s) | 134, 672, 1254, 1519, 2350, 2826 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3132 |
| BmeT110I | CYCGRG | 3 cut(s) | 2207, 2748, 2852 |
| BmrI | ACTGGG | 1 cut(s) | 2986 |
| BmsI | GCATC | 8 cut(s) | 171, 402, 615, 1894, 2224, 2623, 2936, 3122 |
| BmuI | ACTGGG | 1 cut(s) | 2986 |
| BpiI | GAAGAC | 2 cut(s) | 588, 1836 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1814, 1846, 2103, 2135, 2214, 2246 |
| BpmI | CTGGAG | 6 cut(s) | 498, 720, 1155, 1311, 1335, 2105 |
| Bpu10I | CCTNAGC | 1 cut(s) | 588 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2391, 2453 |
| Bpu14I | TTCGAA | 1 cut(s) | 2630 |
| BpuEI | CTTGAG | 1 cut(s) | 198 |
| BpuMI | CCSGG | 3 cut(s) | 2749, 2750, 3270 |
| BsaHI | GRCGYC | 1 cut(s) | 1618 |
| BsaI | GGTCTC | 2 cut(s) | 525, 2208 |
| BsaWI | WCCGGW | 4 cut(s) | 830, 1991, 2018, 2045 |
| Bse118I | RCCGGY | 1 cut(s) | 466 |
| Bse1I | ACTGG | 7 cut(s) | 498, 507, 1047, 1831, 2198, 2992, 3017 |
| Bse3DI | GCAATG | 3 cut(s) | 237, 861, 3080 |
| BseBI | CCWGG | 9 cut(s) | 138, 393, 516, 1036, 1597, 2199, 2727, 2841, 3280 |
| BseGI | GGATG | 5 cut(s) | 1395, 1702, 2850, 2958, 2987 |
| BseMI | GCAATG | 3 cut(s) | 237, 861, 3080 |
| BseNI | ACTGG | 7 cut(s) | 498, 507, 1047, 1831, 2198, 2992, 3017 |
| BseRI | GAGGAG | 6 cut(s) | 1652, 2723, 2856, 3156, 3159, 3162 |
| BseYI | CCCAGC | 1 cut(s) | 2658 |
| BshNI | GGYRCC | 1 cut(s) | 364 |
| BsiHKAI | GWGCWC | 1 cut(s) | 514 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2207, 2748, 2852 |
| BsiSI | CCGG | 8 cut(s) | 467, 831, 1992, 2019, 2046, 2741, 2749, 3269 |
| BslFI | GGGAC | 6 cut(s) | 246, 409, 1240, 1505, 1842, 2765 |
| BsmBI | CGTCTC | 2 cut(s) | 1444, 1807 |
| BsmFI | GGGAC | 6 cut(s) | 246, 409, 1240, 1505, 1842, 2765 |
| BsmI | GAATGC | 1 cut(s) | 2638 |
| Bso31I | GGTCTC | 2 cut(s) | 525, 2208 |
| BsoBI | CYCGRG | 3 cut(s) | 2207, 2748, 2852 |
| Bsp119I | TTCGAA | 1 cut(s) | 2630 |
| Bsp1286I | GDGCHC | 5 cut(s) | 86, 514, 813, 3052, 3166 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2391, 2453 |
| Bsp19I | CCATGG | 2 cut(s) | 449, 501 |
| BspHI | TCATGA | 1 cut(s) | 2617 |
| BspMAI | CTGCAG | 1 cut(s) | 1354 |
| BspMI | ACCTGC | 1 cut(s) | 3251 |
| BspPI | GGATC | 2 cut(s) | 148, 337 |
| BspQI | GCTCTTC | 2 cut(s) | 801, 1398 |
| BspT104I | TTCGAA | 1 cut(s) | 2630 |
| BspT107I | GGYRCC | 1 cut(s) | 364 |
| BspTNI | GGTCTC | 2 cut(s) | 525, 2208 |
| BsrDI | GCAATG | 3 cut(s) | 237, 861, 3080 |
| BsrFI | RCCGGY | 1 cut(s) | 466 |
| BsrI | ACTGG | 7 cut(s) | 498, 507, 1047, 1831, 2198, 2992, 3017 |
| BssAI | RCCGGY | 1 cut(s) | 466 |
| BssNI | GRCGYC | 1 cut(s) | 1618 |
| BssT1I | CCWWGG | 7 cut(s) | 449, 501, 813, 1752, 2091, 2139, 2663 |
| Bst2UI | CCWGG | 9 cut(s) | 138, 393, 516, 1036, 1597, 2199, 2727, 2841, 3280 |
| Bst4CI | ACNGT | 6 cut(s) | 27, 1770, 1794, 1976, 2054, 2811 |
| Bst6I | CTCTTC | 4 cut(s) | 350, 801, 1398, 1629 |
| BstACI | GRCGYC | 1 cut(s) | 1618 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3040, 3082 |
| BstBI | TTCGAA | 1 cut(s) | 2630 |
| BstC8I | GCNNGC | 7 cut(s) | 468, 534, 1086, 1182, 1410, 2338, 3048 |
| BstDSI | CCRYGG | 2 cut(s) | 449, 501 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2345, 3249 |
| BstF5I | GGATG | 5 cut(s) | 1395, 1702, 2850, 2958, 2987 |
| BstH2I | RGCGCY | 1 cut(s) | 467 |
| BstHHI | GCGC | 1 cut(s) | 466 |
| BstNI | CCWGG | 9 cut(s) | 138, 393, 516, 1036, 1597, 2199, 2727, 2841, 3280 |
| BstNSI | RCATGY | 3 cut(s) | 226, 2452, 3110 |
| BstSFI | CTRYAG | 3 cut(s) | 1350, 2590, 2874 |
| BstV2I | GAAGAC | 2 cut(s) | 588, 1836 |
| BstX2I | RGATCY | 2 cut(s) | 578, 1711 |
| BstYI | RGATCY | 2 cut(s) | 578, 1711 |
| BtgI | CCRYGG | 2 cut(s) | 449, 501 |
| BtgZI | GCGATG | 1 cut(s) | 1677 |
| BtsCI | GGATG | 5 cut(s) | 1395, 1702, 2850, 2958, 2987 |
| BtsIMutI | CAGTG | 5 cut(s) | 514, 1981, 2486, 3024, 3164 |
| BveI | ACCTGC | 1 cut(s) | 3251 |
| Cac8I | GCNNGC | 7 cut(s) | 468, 534, 1086, 1182, 1410, 2338, 3048 |
| CaiI | CAGNNNCTG | 3 cut(s) | 154, 1826, 2327 |
| CciI | TCATGA | 1 cut(s) | 2617 |
| CfoI | GCGC | 1 cut(s) | 466 |
| Cfr10I | RCCGGY | 1 cut(s) | 466 |
| Cfr9I | CCCGGG | 1 cut(s) | 2748 |
| CseI | GACGC | 3 cut(s) | 1461, 1626, 2778 |
| Csp6I | GTAC | 3 cut(s) | 1040, 2848, 2995 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 9, 44, 2764, 2799 |
| CviQI | GTAC | 3 cut(s) | 1040, 2848, 2995 |
| DraI | TTTAAA | 2 cut(s) | 802, 2164 |
| DraIII | CACNNNGTG | 1 cut(s) | 3182 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3132 |
| EaeI | YGGCCR | 3 cut(s) | 504, 877, 3002 |
| Eam1104I | CTCTTC | 4 cut(s) | 350, 801, 1398, 1629 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3132 |
| EarI | CTCTTC | 4 cut(s) | 350, 801, 1398, 1629 |
| EciI | GGCGGA | 2 cut(s) | 1071, 1402 |
| Eco130I | CCWWGG | 7 cut(s) | 449, 501, 813, 1752, 2091, 2139, 2663 |
| Eco147I | AGGCCT | 1 cut(s) | 2144 |
| Eco24I | GRGCYC | 4 cut(s) | 86, 813, 3052, 3166 |
| Eco31I | GGTCTC | 2 cut(s) | 525, 2208 |
| Eco32I | GATATC | 1 cut(s) | 159 |
| Eco47I | GGWCC | 6 cut(s) | 134, 672, 1254, 1519, 2350, 2826 |
| Eco57I | CTGAAG | 3 cut(s) | 1944, 1962, 3053 |
| Eco88I | CYCGRG | 3 cut(s) | 2207, 2748, 2852 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2345, 3249 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1254, 1519, 2826, 2837 |
| EcoRI | GAATTC | 1 cut(s) | 2771 |
| EcoRII | CCWGG | 9 cut(s) | 136, 391, 514, 1034, 1595, 2197, 2725, 2839, 3278 |
| EcoRV | GATATC | 1 cut(s) | 159 |
| EcoT14I | CCWWGG | 7 cut(s) | 449, 501, 813, 1752, 2091, 2139, 2663 |
| EcoT22I | ATGCAT | 1 cut(s) | 3108 |
| EcoT38I | GRGCYC | 4 cut(s) | 86, 813, 3052, 3166 |
| ErhI | CCWWGG | 7 cut(s) | 449, 501, 813, 1752, 2091, 2139, 2663 |
| Esp3I | CGTCTC | 2 cut(s) | 1444, 1807 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 996, 1028 |
| FaqI | GGGAC | 6 cut(s) | 246, 409, 1240, 1505, 1842, 2765 |
| FauI | CCCGC | 2 cut(s) | 417, 3099 |
| FbaI | TGATCA | 1 cut(s) | 1534 |
| FokI | GGATG | 5 cut(s) | 1402, 1709, 2857, 2945, 2974 |
| FriOI | GRGCYC | 4 cut(s) | 86, 813, 3052, 3166 |
| GlaI | GCGC | 1 cut(s) | 465 |
| GsaI | CCCAGC | 1 cut(s) | 2662 |
| GsuI | CTGGAG | 6 cut(s) | 498, 720, 1155, 1311, 1335, 2105 |
| HaeII | RGCGCY | 1 cut(s) | 467 |
| HapII | CCGG | 8 cut(s) | 467, 831, 1992, 2019, 2046, 2741, 2749, 3269 |
| HgaI | GACGC | 3 cut(s) | 1461, 1626, 2778 |
| HhaI | GCGC | 1 cut(s) | 466 |
| Hin1I | GRCGYC | 1 cut(s) | 1618 |
| Hin6I | GCGC | 1 cut(s) | 464 |
| HinP1I | GCGC | 1 cut(s) | 464 |
| HincII | GTYRAC | 2 cut(s) | 2538, 3215 |
| HindII | GTYRAC | 2 cut(s) | 2538, 3215 |
| HindIII | AAGCTT | 1 cut(s) | 272 |
| HpaI | GTTAAC | 1 cut(s) | 2538 |
| HpaII | CCGG | 8 cut(s) | 467, 831, 1992, 2019, 2046, 2741, 2749, 3269 |
| HphI | GGTGA | 8 cut(s) | 845, 998, 1490, 1788, 2006, 2033, 2060, 2183 |
| Hpy166II | GTNNAC | 5 cut(s) | 200, 266, 2538, 3022, 3215 |
| Hpy8I | GTNNAC | 5 cut(s) | 200, 266, 2538, 3022, 3215 |
| Hpy99I | CGWCG | 1 cut(s) | 1620 |
| HpyCH4III | ACNGT | 6 cut(s) | 27, 1770, 1794, 1976, 2054, 2811 |
| HpyCH4IV | ACGT | 1 cut(s) | 2478 |
| HpySE526I | ACGT | 1 cut(s) | 2478 |
| Hsp92I | GRCGYC | 1 cut(s) | 1618 |
| HspAI | GCGC | 1 cut(s) | 464 |
| KroI | GCCGGC | 1 cut(s) | 466 |
| KroNI | GCCGGC | 1 cut(s) | 468 |
| Ksp22I | TGATCA | 1 cut(s) | 1534 |
| KspAI | GTTAAC | 1 cut(s) | 2538 |
| LguI | GCTCTTC | 2 cut(s) | 801, 1398 |
| LmnI | GCTCC | 4 cut(s) | 517, 1372, 3169, 3298 |
| LweI | GCATC | 8 cut(s) | 171, 402, 615, 1894, 2224, 2623, 2936, 3122 |
| MaeII | ACGT | 1 cut(s) | 2478 |
| MaeIII | GTNAC | 6 cut(s) | 1794, 1994, 2021, 2048, 2444, 2692 |
| MfeI | CAATTG | 2 cut(s) | 434, 1722 |
| MflI | RGATCY | 2 cut(s) | 578, 1711 |
| MhlI | GDGCHC | 5 cut(s) | 86, 514, 813, 3052, 3166 |
| MlsI | TGGCCA | 2 cut(s) | 506, 879 |
| MluNI | TGGCCA | 2 cut(s) | 506, 879 |
| MlyI | GAGTC | 8 cut(s) | 391, 1109, 1649, 2223, 2232, 2857, 2864, 3121 |
| MmeI | TCCRAC | 1 cut(s) | 3005 |
| Mox20I | TGGCCA | 2 cut(s) | 506, 879 |
| Mph1103I | ATGCAT | 1 cut(s) | 3108 |
| MroNI | GCCGGC | 1 cut(s) | 466 |
| MroXI | GAANNNNTTC | 2 cut(s) | 118, 944 |
| MscI | TGGCCA | 2 cut(s) | 506, 879 |
| MslI | CAYNNNNRTG | 3 cut(s) | 227, 1476, 1511 |
| Msp20I | TGGCCA | 2 cut(s) | 506, 879 |
| MspA1I | CMGCKG | 5 cut(s) | 58, 592, 1180, 2125, 3001 |
| MspI | CCGG | 8 cut(s) | 467, 831, 1992, 2019, 2046, 2741, 2749, 3269 |
| MunI | CAATTG | 2 cut(s) | 434, 1722 |
| Mva1269I | GAATGC | 1 cut(s) | 2638 |
| MvaI | CCWGG | 9 cut(s) | 138, 393, 516, 1036, 1597, 2199, 2727, 2841, 3280 |
| NaeI | GCCGGC | 1 cut(s) | 468 |
| NciI | CCSGG | 3 cut(s) | 2749, 2750, 3270 |
| NcoI | CCATGG | 2 cut(s) | 449, 501 |
| NgoMIV | GCCGGC | 1 cut(s) | 466 |
| NmuCI | GTSAC | 5 cut(s) | 1794, 1994, 2021, 2048, 2444 |
| NsiI | ATGCAT | 1 cut(s) | 3108 |
| NspI | RCATGY | 3 cut(s) | 226, 2452, 3110 |
| NspV | TTCGAA | 1 cut(s) | 2630 |
| OliI | CACNNNNGTG | 1 cut(s) | 1476 |
| PaeR7I | CTCGAG | 1 cut(s) | 2207 |
| PagI | TCATGA | 1 cut(s) | 2617 |
| PasI | CCCWGGG | 1 cut(s) | 392 |
| PceI | AGGCCT | 1 cut(s) | 2144 |
| PciSI | GCTCTTC | 2 cut(s) | 801, 1398 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2350 |
| PctI | GAATGC | 1 cut(s) | 2638 |
| PdiI | GCCGGC | 1 cut(s) | 468 |
| PdmI | GAANNNNTTC | 2 cut(s) | 118, 944 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3182 |
| PfoI | TCCNGGA | 2 cut(s) | 136, 2725 |
| PleI | GAGTC | 8 cut(s) | 391, 1108, 1648, 2223, 2231, 2857, 2863, 3121 |
| PpsI | GAGTC | 8 cut(s) | 391, 1108, 1648, 2223, 2231, 2857, 2863, 3121 |
| PpuMI | RGGWCCY | 3 cut(s) | 1254, 1519, 2826 |
| Psp5II | RGGWCCY | 3 cut(s) | 1254, 1519, 2826 |
| Psp6I | CCWGG | 9 cut(s) | 136, 391, 514, 1034, 1595, 2197, 2725, 2839, 3278 |
| PspFI | CCCAGC | 1 cut(s) | 2658 |
| PspGI | CCWGG | 9 cut(s) | 136, 391, 514, 1034, 1595, 2197, 2725, 2839, 3278 |
| PspPPI | RGGWCCY | 3 cut(s) | 1254, 1519, 2826 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 247, 279 |
| PstI | CTGCAG | 1 cut(s) | 1354 |
| PstNI | CAGNNNCTG | 3 cut(s) | 154, 1826, 2327 |
| PsuI | RGATCY | 2 cut(s) | 578, 1711 |
| PvuII | CAGCTG | 3 cut(s) | 58, 1180, 2125 |
| RsaI | GTAC | 3 cut(s) | 1041, 2849, 2996 |
| RsaNI | GTAC | 3 cut(s) | 1040, 2848, 2995 |
| RseI | CAYNNNNRTG | 3 cut(s) | 227, 1476, 1511 |
| SapI | GCTCTTC | 2 cut(s) | 801, 1398 |
| SchI | GAGTC | 8 cut(s) | 391, 1109, 1649, 2223, 2232, 2857, 2864, 3121 |
| SduI | GDGCHC | 5 cut(s) | 86, 514, 813, 3052, 3166 |
| SfaNI | GCATC | 8 cut(s) | 171, 402, 615, 1894, 2224, 2623, 2936, 3122 |
| SfcI | CTRYAG | 3 cut(s) | 1350, 2590, 2874 |
| Sfr274I | CTCGAG | 1 cut(s) | 2207 |
| SfuI | TTCGAA | 1 cut(s) | 2630 |
| SinI | GGWCC | 6 cut(s) | 134, 672, 1254, 1519, 2350, 2826 |
| SlaI | CTCGAG | 1 cut(s) | 2207 |
| SmaI | CCCGGG | 1 cut(s) | 2750 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 227, 1476, 1511 |
| SmlI | CTYRAG | 2 cut(s) | 213, 2207 |
| SmoI | CTYRAG | 2 cut(s) | 213, 2207 |
| SpeI | ACTAGT | 2 cut(s) | 194, 905 |
| SseBI | AGGCCT | 1 cut(s) | 2144 |
| StuI | AGGCCT | 1 cut(s) | 2144 |
| StyI | CCWWGG | 7 cut(s) | 449, 501, 813, 1752, 2091, 2139, 2663 |
| TaaI | ACNGT | 6 cut(s) | 27, 1770, 1794, 1976, 2054, 2811 |
| TaiI | ACGT | 1 cut(s) | 2481 |
| TaqI | TCGA | 6 cut(s) | 1491, 1615, 2135, 2208, 2232, 2630 |
| TauI | GCSGC | 2 cut(s) | 3004, 3189 |
| TscAI | CASTG | 5 cut(s) | 514, 1981, 2493, 3024, 3164 |
| TseFI | GTSAC | 5 cut(s) | 1794, 1994, 2021, 2048, 2444 |
| Tsp45I | GTSAC | 5 cut(s) | 1794, 1994, 2021, 2048, 2444 |
| TspGWI | ACGGA | 1 cut(s) | 2787 |
| TspMI | CCCGGG | 1 cut(s) | 2748 |
| TspRI | CASTG | 5 cut(s) | 514, 1981, 2493, 3024, 3164 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3182 |
| VpaK11BI | GGWCC | 6 cut(s) | 134, 672, 1254, 1519, 2350, 2826 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2345, 3249 |
| XapI | RAATTY | 4 cut(s) | 797, 1077, 2626, 2771 |
| XceI | RCATGY | 3 cut(s) | 226, 2452, 3110 |
| XhoI | CTCGAG | 1 cut(s) | 2207 |
| XmaI | CCCGGG | 1 cut(s) | 2748 |
| XmaJI | CCTAGG | 1 cut(s) | 2663 |
| XmnI | GAANNNNTTC | 2 cut(s) | 118, 944 |
| Zsp2I | ATGCAT | 1 cut(s) | 3108 |