Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0007283

Physical Location & Seq

Genomic Coordinates Forward (+)

1960559 .. 1964645

Gene Structure 4087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1032300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGATGAGCTGGCACGCTCGTGACTGCCCACACTTCAGAGAGTTCACTGGAACTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGCTGAAGAAGCTTCTCGCTCCAGCACAATCTCGGCAACAAATCCTAACGGTTTGAATTTGCTCAACGGAAATAACCGTCACCGATTCCTCGGGAAGAAGAAGATGGCGACTCTGCAACTTCCGGGTTGCAGAGCTATCGATCGCTCTTCGCCTCCGCCGTTGATCCACGACTCCTCCTCTTCCTCCGCGTTTTGGGGAGGACACGTGGCTTTCATCAACGCCCGTCGTTCCTCGACAGAGAAGCTCCGGTCCGACGGCGGAGCGTTTAGGATCGTGGCGAAGTCGGGCGGTTCGTCTGCGTCGTCGTTCAAGATGAACTTGAACGAGTACATGGTCACTCTCGACAAACCGCTCGGGATTCGGTTCGCGCTCTCCGTCGACGGCAGAATCTTCGTCCACGCCCTCAAGAAAGGGGGGAATGCGGAGAAGTCCAGGATAGTAATGGTGGGCGACAAATTGAAAAGGGCCGGGGATTTGTCCGCCGGCCGGCTCGTTGAGGCCACCGATTTTGGTGATGCACAGAAGATGCTGAGGGAGAAAACAGGATCTGTTAGCCTGGTTCTTGAGAGACCCTTGTCTCCTTTTCCAATTCAGCAACTGCTTCTTATGAATGATCTCGATAATCTGTTCAATAGAGGTAGAGTTTCTTTTGCAACTTGGAACAAGGCTGTGCTGGCTTCAAGTTTGCAGTCATCTCCGGGAACCGGTGGGAACTCTGGCTTTGTTACGTTCTCCTCGAAGTTTCTGAAACCACGAGGATGGAATTATTTGAGTGACAAAAATGGTCATATTCAATCACAAATGCAGAAGAATACTCTTGCCCAACCCCTGAGCCAGCTTGCTTGTATTTACGCTGAAGAGGAGTCCGGAGATGGAGAATGGACTCATGGGAACTTCCCACTGGATGAATATGTTAAGGCACTGGATCGCTCTAAAGGCGAGCTATACTATAATCACGCTCTCGGTATGCGCTACAGTAAGATTACTGAACAAATATATGTTGGATCATGCATACAAACAGAAGATGATGTGGTGGTGTTGGCAAATGTGGCGGGAGTTACTGCTATACTGAATTTCCAAAGTGGATTTGAGACAGAAAATTGGGGAATAAATTCCAACGCAATAAATGAGTCATGCCAAAAGTTCGATATTCTGATGATCAACTATCCTATAAGGGATGGAGATTCTTTTGATTTGAGGAAGAAACTGCCATTCTGTGTGGGGTTATTATTACGCTTATTAAAGAAGAATCATCGTGTTTTTGTTACTTGTACAACTGGTTTTGATCGGTCTCCAGCTTGTGTAATAGCATACCTACACTGGATGACTGATACTTCCCTTCACGCAGCTTATAATTTTGTCACCGGGTTGCATTTATGCAAGCCTGACAGACCGGCAATTGCTTGGGCAACATGGGATCTTATAGCCATGGTGGAAAATGGGAAACATGATGGACCTCCAACACATGCTGTGACATTTGTATGGAATGGACAAGAGGGGGAGGATGTAACCTTAGTTGGAGATTTCACTGCAAACTGGAAAGAACCAATTCGGGCAACTCACAAAGGTGGATCCCGATGGGAAGCAGAAGTCAGACTTTCACAAGGAAAGTATTACTATAAGTTCATTGTTAATGGGAATTGGCGGCATTCAACATTGTCCCCATCTGAAAGGGATGGAAGTGGGAATGTCAACAATATAATCATCATTGGCGATACTGCCAGCGTGAGACCTTCTGTTCAACAACCGCAAAAGGATGTGAATATTGTGAAGGTGATCGAGAGGCCATTGACAGAAAACGAGCGCTTCATGCTGGCAAAAGCTGCTCGTTGCGTTTCATTCTCAATATGCCCGATTAGACTAGCTCCAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001871 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005791 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0006073 GO:0006091 GO:0006112 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009507 GO:0009532 GO:0009536 GO:0009569 GO:0009570 GO:0009987 GO:0012505 GO:0015980 GO:0016020 GO:0016052 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0030246 GO:0030247 GO:0030867 GO:0031090 GO:0031984 GO:0042175 GO:0042578 GO:0043036 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046838 GO:0055114 GO:0071704 GO:0098552 GO:0098554 GO:0098556 GO:0098562 GO:0098588 GO:0098827 GO:1901575 GO:2001069

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMPK1_CBM DSPc

Protein Analysis

659

Amino Acids

73.27

Weight (kDa)

9.16

Isoelectric Point (pI)

42.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	387 - 498	4.4e-09	Dual specificity phosphatase, catalytic domain
AMPK1_CBM	PF16561	525 - 606	1.6e-18	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01510 AT3G01510 AT3G01510
fragaria_vesca	FvH4_6g50790 FvH4_6g50790
malus_domestica	MD09G1032300.v1.1
prunus_persica	Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1
pyrus_communis	pycom111g02570 pycom17g03110 pycom17g03130
rosa_chinensis	RchiOBHm_Chr2g0172101 RchiOBHm_Chr2g0172181
rosa_laevigata	RLG00000022090
rosa_multiflora	Rmu_ssc0000252.1_g000048
rosa_roxburghii	Rroxscaffold_2G00080100
rosa_rugosa	Rorug02G0556900
rosa_samantha	Rh2AG632400 Rh2BG646000 Rh2CG612600 Rh2DG653400 Rh2DG660600
rosa_wichuraiana	Rw2G052350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1455
AccBSI	CCGCTC	1 cut(s)	454
AccI	GTMKAC	1 cut(s)	480
AccII	CGCG	2 cut(s)	290, 470
AccIII	TCCGGA	1 cut(s)	968
AclWI	GGATC	8 cut(s)	259, 380, 655, 1035, 1114, 1527, 1668, 1681
AcoI	YGGCCR	1 cut(s)	586
AcsI	RAATTY	3 cut(s)	157, 1174, 1213
AcuI	CTGAAG	3 cut(s)	19, 126, 978
AcvI	CACGTG	1 cut(s)	307
AfaI	GTAC	2 cut(s)	431, 1375
AfeI	AGCGCT	1 cut(s)	1907
AfiI	CCNNNNNNNGG	3 cut(s)	294, 588, 806
AflIII	ACRYGT	1 cut(s)	304
AgeI	ACCGGT	1 cut(s)	806
AgsI	TTSAA	9 cut(s)	157, 412, 424, 562, 733, 783, 896, 1755, 1844
AjnI	CCWGG	2 cut(s)	533, 657
AleI	CACNNNNGTG	2 cut(s)	18, 1668
Alw26I	GTCTC	5 cut(s)	664, 684, 1187, 1398, 1825
AlwI	GGATC	8 cut(s)	259, 380, 655, 1035, 1114, 1527, 1668, 1681
AlwNI	CAGNNNCTG	2 cut(s)	650, 700
Ama87I	CYCGRG	2 cut(s)	191, 455
Aor13HI	TCCGGA	1 cut(s)	968
Aor51HI	AGCGCT	1 cut(s)	1907
AoxI	GGCC	4 cut(s)	567, 586, 600, 1886
ApeKI	GCWGC	2 cut(s)	1448, 1925
ApoI	RAATTY	3 cut(s)	157, 1174, 1213
AsiGI	ACCGGT	1 cut(s)	806
Asp700I	GAANNNNTTC	2 cut(s)	1213, 1650
AspLEI	GCGC	3 cut(s)	472, 1074, 1908
AspS9I	GGNCC	3 cut(s)	351, 567, 1556
AsuC2I	CCSGG	4 cut(s)	225, 571, 801, 1468
AsuHPI	GGTGA	4 cut(s)	173, 626, 1456, 1888
AvaI	CYCGRG	2 cut(s)	191, 455
AvaII	GGWCC	2 cut(s)	351, 1556
BamHI	GGATCC	1 cut(s)	1673
BauI	CACGAG	2 cut(s)	18, 855
BbrPI	CACGTG	1 cut(s)	307
BbvCI	CCTCAGC	1 cut(s)	632
BbvI	GCAGC	2 cut(s)	1460, 1912
BccI	CCATC	8 cut(s)	199, 855, 968, 1274, 1547, 1674, 1772, 1774
BceAI	ACGGC	3 cut(s)	244, 373, 499
BcgI	CGANNNNNNTGC	4 cut(s)	220, 254, 475, 509
BciT130I	CCWGG	2 cut(s)	535, 659
BclI	TGATCA	1 cut(s)	1260
BcnI	CCSGG	4 cut(s)	225, 571, 801, 1468
BcoDI	GTCTC	5 cut(s)	664, 684, 1187, 1398, 1825
BfaI	CTAG	1 cut(s)	1964
BfmI	CTRYAG	1 cut(s)	1075
BfoI	RGCGCY	1 cut(s)	1909
BisI	GCNGC	3 cut(s)	1449, 1748, 1926
BlsI	GCNGC	3 cut(s)	1450, 1749, 1927
Bme1390I	CCNGG	6 cut(s)	225, 535, 571, 659, 801, 1468
Bme18I	GGWCC	2 cut(s)	351, 1556
BmeT110I	CYCGRG	2 cut(s)	191, 455
BmgT120I	GGNCC	3 cut(s)	351, 567, 1556
BmiI	GGNNCC	2 cut(s)	805, 1675
BmrFI	CCNGG	6 cut(s)	225, 535, 571, 659, 801, 1468
BmsI	GCATC	2 cut(s)	607, 618
BoxI	GACNNNNGTC	1 cut(s)	676
BpmI	CTGGAG	3 cut(s)	75, 106, 1380
Bpu10I	CCTNAGC	2 cut(s)	632, 932
BpuEI	CTTGAG	2 cut(s)	491, 686
BpuMI	CCSGG	4 cut(s)	225, 571, 801, 1468
Bsa29I	ATCGAT	1 cut(s)	240
BsaAI	YACGTR	1 cut(s)	307
BsaI	GGTCTC	3 cut(s)	664, 1398, 1825
BsaJI	CCNNGG	3 cut(s)	190, 570, 1530
BsaWI	WCCGGW	3 cut(s)	348, 806, 968
BsaXI	ACNNNNNCTCC	4 cut(s)	260, 290, 291, 321
Bsc4I	CCNNNNNNNGG	3 cut(s)	294, 588, 806
Bse118I	RCCGGY	4 cut(s)	584, 588, 806, 1495
Bse1I	ACTGG	7 cut(s)	52, 58, 1008, 1029, 1384, 1427, 1643
BseAI	TCCGGA	1 cut(s)	968
BseBI	CCWGG	2 cut(s)	535, 659
BseCI	ATCGAT	1 cut(s)	240
BseDI	CCNNGG	3 cut(s)	190, 570, 1530
BseGI	GGATG	7 cut(s)	866, 1012, 1285, 1431, 1612, 1783, 1864
BseLI	CCNNNNNNNGG	3 cut(s)	294, 588, 806
BseMII	CTCAG	2 cut(s)	623, 923
BseNI	ACTGG	7 cut(s)	52, 58, 1008, 1029, 1384, 1427, 1643
BseRI	GAGGAG	5 cut(s)	114, 265, 268, 826, 977
BseX3I	CGGCCG	1 cut(s)	586
BseXI	GCAGC	2 cut(s)	1460, 1912
Bsh1236I	CGCG	2 cut(s)	290, 470
Bsh1285I	CGRYCG	2 cut(s)	244, 589
BshFI	GGCC	4 cut(s)	569, 588, 602, 1888
BshTI	ACCGGT	1 cut(s)	806
BshVI	ATCGAT	1 cut(s)	240
BsiEI	CGRYCG	2 cut(s)	244, 589
BsiHKCI	CYCGRG	2 cut(s)	191, 455
BslFI	GGGAC	1 cut(s)	1747
BslI	CCNNNNNNNGG	3 cut(s)	294, 588, 806
BsmAI	GTCTC	5 cut(s)	664, 684, 1187, 1398, 1825
BsmFI	GGGAC	1 cut(s)	1747
BsmI	GAATGC	2 cut(s)	526, 1750
BsnI	GGCC	4 cut(s)	569, 588, 602, 1888
Bso31I	GGTCTC	3 cut(s)	664, 1398, 1825
BsoBI	CYCGRG	2 cut(s)	191, 455
Bsp13I	TCCGGA	1 cut(s)	968
Bsp1407I	TGTACA	1 cut(s)	1373
Bsp19I	CCATGG	1 cut(s)	1530
BspANI	GGCC	4 cut(s)	569, 588, 602, 1888
BspCNI	CTCAG	2 cut(s)	624, 924
BspDI	ATCGAT	1 cut(s)	240
BspEI	TCCGGA	1 cut(s)	968
BspFNI	CGCG	2 cut(s)	290, 470
BspLI	GGNNCC	2 cut(s)	805, 1675
BspPI	GGATC	8 cut(s)	259, 380, 655, 1035, 1114, 1527, 1668, 1681
BspQI	GCTCTTC	1 cut(s)	253
BspTNI	GGTCTC	3 cut(s)	664, 1398, 1825
BsrBI	CCGCTC	1 cut(s)	454
BsrFI	RCCGGY	4 cut(s)	584, 588, 806, 1495
BsrGI	TGTACA	1 cut(s)	1373
BsrI	ACTGG	7 cut(s)	52, 58, 1008, 1029, 1384, 1427, 1643
BssAI	RCCGGY	4 cut(s)	584, 588, 806, 1495
BssECI	CCNNGG	3 cut(s)	190, 570, 1530
BssSI	CACGAG	2 cut(s)	18, 855
BssT1I	CCWWGG	1 cut(s)	1530
Bst2BI	CACGAG	2 cut(s)	18, 855
Bst2UI	CCWGG	2 cut(s)	535, 659
Bst4CI	ACNGT	3 cut(s)	152, 179, 1079
Bst6I	CTCTTC	3 cut(s)	253, 286, 954
BstAPI	GCANNNNNTGC	1 cut(s)	1925
BstAUI	TGTACA	1 cut(s)	1373
BstBAI	YACGTR	1 cut(s)	307
BstDEI	CTNAG	3 cut(s)	632, 932, 1615
BstDSI	CCRYGG	1 cut(s)	1530
BstF5I	GGATG	7 cut(s)	866, 1012, 1285, 1431, 1612, 1783, 1864
BstFNI	CGCG	2 cut(s)	290, 470
BstH2I	RGCGCY	1 cut(s)	1909
BstHHI	GCGC	3 cut(s)	472, 1074, 1908
BstMAI	GTCTC	5 cut(s)	664, 684, 1187, 1398, 1825
BstMCI	CGRYCG	2 cut(s)	244, 589
BstMWI	GCNNNNNNNGC	6 cut(s)	110, 776, 1038, 1151, 1912, 1925
BstNI	CCWGG	2 cut(s)	535, 659
BstNSI	RCATGY	1 cut(s)	1571
BstPAI	GACNNNNGTC	1 cut(s)	676
BstSCI	CCNGG	6 cut(s)	223, 533, 569, 657, 799, 1466
BstSFI	CTRYAG	1 cut(s)	1075
BstUI	CGCG	2 cut(s)	290, 470
BstV1I	GCAGC	2 cut(s)	1460, 1912
BstX2I	RGATCY	3 cut(s)	647, 1519, 1673
BstXI	CCANNNNNNTGG	1 cut(s)	861
BstYI	RGATCY	3 cut(s)	647, 1519, 1673
BstZI	CGGCCG	1 cut(s)	586
Bsu15I	ATCGAT	1 cut(s)	240
BsuRI	GGCC	4 cut(s)	569, 588, 602, 1888
BsuTUI	ATCGAT	1 cut(s)	240
BtgI	CCRYGG	1 cut(s)	1530
BtsCI	GGATG	7 cut(s)	866, 1012, 1285, 1431, 1612, 1783, 1864
BtsI	GCAGTG	1 cut(s)	1629
BtsIMutI	CAGTG	5 cut(s)	45, 1001, 1022, 1420, 1629
CaiI	CAGNNNCTG	2 cut(s)	650, 700
CfoI	GCGC	3 cut(s)	472, 1074, 1908
Cfr10I	RCCGGY	4 cut(s)	584, 588, 806, 1495
Cfr13I	GGNCC	3 cut(s)	351, 567, 1556
ClaI	ATCGAT	1 cut(s)	240
CpoI	CGGWCCG	1 cut(s)	351
CseI	GACGC	1 cut(s)	390
Csp6I	GTAC	2 cut(s)	430, 1374
CspAI	ACCGGT	1 cut(s)	806
CspCI	CAANNNNNGTGG	2 cut(s)	592, 627
CspI	CGGWCCG	1 cut(s)	351
CviAII	CATG	9 cut(s)	433, 989, 1110, 1236, 1515, 1531, 1550, 1568, 1912
CviQI	GTAC	2 cut(s)	430, 1374
DdeI	CTNAG	3 cut(s)	632, 932, 1615
EaeI	YGGCCR	1 cut(s)	586
EagI	CGGCCG	1 cut(s)	586
Eam1104I	CTCTTC	3 cut(s)	253, 286, 954
EarI	CTCTTC	3 cut(s)	253, 286, 954
EciI	GGCGGA	3 cut(s)	246, 375, 571
EclXI	CGGCCG	1 cut(s)	586
Eco130I	CCWWGG	1 cut(s)	1530
Eco31I	GGTCTC	3 cut(s)	664, 1398, 1825
Eco47I	GGWCC	2 cut(s)	351, 1556
Eco47III	AGCGCT	1 cut(s)	1907
Eco52I	CGGCCG	1 cut(s)	586
Eco57I	CTGAAG	3 cut(s)	19, 126, 978
Eco72I	CACGTG	1 cut(s)	307
Eco88I	CYCGRG	2 cut(s)	191, 455
EcoRII	CCWGG	2 cut(s)	533, 657
EcoT14I	CCWWGG	1 cut(s)	1530
EcoT22I	ATGCAT	1 cut(s)	1115
ErhI	CCWWGG	1 cut(s)	1530
FaeI	CATG	9 cut(s)	436, 992, 1113, 1239, 1518, 1534, 1553, 1571, 1915
FalI	AAGNNNNNCTT	4 cut(s)	404, 436, 1683, 1715
FaqI	GGGAC	1 cut(s)	1747
FatI	CATG	9 cut(s)	432, 988, 1109, 1235, 1514, 1530, 1549, 1567, 1911
FauI	CCCGC	1 cut(s)	1147
FbaI	TGATCA	1 cut(s)	1260
FblI	GTMKAC	1 cut(s)	480
Fnu4HI	GCNGC	3 cut(s)	1449, 1748, 1926
FokI	GGATG	7 cut(s)	873, 1019, 1292, 1438, 1619, 1790, 1871
Fsp4HI	GCNGC	3 cut(s)	1449, 1748, 1926
FspBI	CTAG	1 cut(s)	1964
GlaI	GCGC	3 cut(s)	471, 1073, 1907
GluI	GCNGC	3 cut(s)	1449, 1748, 1926
GsuI	CTGGAG	3 cut(s)	75, 106, 1380
HaeII	RGCGCY	1 cut(s)	1909
HaeIII	GGCC	4 cut(s)	569, 588, 602, 1888
HgaI	GACGC	1 cut(s)	390
HhaI	GCGC	3 cut(s)	472, 1074, 1908
Hin1II	CATG	9 cut(s)	436, 992, 1113, 1239, 1518, 1534, 1553, 1571, 1915
Hin6I	GCGC	3 cut(s)	470, 1072, 1906
HinP1I	GCGC	3 cut(s)	470, 1072, 1906
HincII	GTYRAC	2 cut(s)	481, 1795
HindII	GTYRAC	2 cut(s)	481, 1795
HindIII	AAGCTT	1 cut(s)	111
HphI	GGTGA	4 cut(s)	173, 626, 1456, 1888
Hpy166II	GTNNAC	4 cut(s)	45, 481, 499, 1795
Hpy188I	TCNGA	6 cut(s)	38, 355, 849, 1257, 1697, 1771
Hpy8I	GTNNAC	4 cut(s)	45, 481, 499, 1795
Hpy99I	CGWCG	6 cut(s)	330, 359, 406, 409, 482, 485
HpyAV	CCTTC	3 cut(s)	1451, 1845, 1867
HpyCH4III	ACNGT	3 cut(s)	152, 179, 1079
HpyCH4IV	ACGT	2 cut(s)	306, 830
HpyF10VI	GCNNNNNNNGC	6 cut(s)	110, 776, 1038, 1151, 1912, 1925
HpyF3I	CTNAG	3 cut(s)	632, 932, 1615
HpySE526I	ACGT	2 cut(s)	306, 830
Hsp92II	CATG	9 cut(s)	436, 992, 1113, 1239, 1518, 1534, 1553, 1571, 1915
HspAI	GCGC	3 cut(s)	470, 1072, 1906
Kpn2I	TCCGGA	1 cut(s)	968
KroI	GCCGGC	2 cut(s)	584, 588
KroNI	GCCGGC	2 cut(s)	586, 590
Ksp22I	TGATCA	1 cut(s)	1260
LguI	GCTCTTC	1 cut(s)	253
LmnI	GCTCC	5 cut(s)	101, 125, 351, 362, 1972
Lsp1109I	GCAGC	2 cut(s)	1460, 1912
LweI	GCATC	2 cut(s)	607, 618
MaeI	CTAG	1 cut(s)	1964
MaeII	ACGT	2 cut(s)	306, 830
MbiI	CCGCTC	1 cut(s)	454
MfeI	CAATTG	1 cut(s)	1500
MflI	RGATCY	3 cut(s)	647, 1519, 1673
MlyI	GAGTC	5 cut(s)	205, 266, 974, 979, 1241
MmeI	TCCRAC	5 cut(s)	378, 1084, 1242, 1586, 1600
Mph1103I	ATGCAT	1 cut(s)	1115
MroI	TCCGGA	1 cut(s)	968
MroNI	GCCGGC	2 cut(s)	584, 588
MroXI	GAANNNNTTC	2 cut(s)	1213, 1650
MseI	TTAA	3 cut(s)	1017, 1343, 1734
MslI	CAYNNNNRTG	4 cut(s)	18, 859, 1582, 1668
MspR9I	CCNGG	6 cut(s)	225, 535, 571, 659, 801, 1468
MunI	CAATTG	1 cut(s)	1500
Mva1269I	GAATGC	2 cut(s)	526, 1750
MvaI	CCWGG	2 cut(s)	535, 659
MvnI	CGCG	2 cut(s)	290, 470
MwoI	GCNNNNNNNGC	6 cut(s)	110, 776, 1038, 1151, 1912, 1925
NaeI	GCCGGC	2 cut(s)	586, 590
NciI	CCSGG	4 cut(s)	225, 571, 801, 1468
NcoI	CCATGG	1 cut(s)	1530
NgoMIV	GCCGGC	2 cut(s)	584, 588
NlaIII	CATG	9 cut(s)	436, 992, 1113, 1239, 1518, 1534, 1553, 1571, 1915
NlaIV	GGNNCC	2 cut(s)	805, 1675
NmeAIII	GCCGAG	1 cut(s)	113
NmuCI	GTSAC	6 cut(s)	20, 179, 436, 875, 1462, 1573
NsiI	ATGCAT	1 cut(s)	1115
NspI	RCATGY	1 cut(s)	1571
OliI	CACNNNNGTG	2 cut(s)	18, 1668
PciSI	GCTCTTC	1 cut(s)	253
PcsI	WCGNNNNNNNCGW	5 cut(s)	257, 392, 401, 474, 836
PctI	GAATGC	2 cut(s)	526, 1750
PdiI	GCCGGC	2 cut(s)	586, 590
PdmI	GAANNNNTTC	2 cut(s)	1213, 1650
PfeI	GAWTC	5 cut(s)	186, 460, 489, 1286, 1351
PfoI	TCCNGGA	2 cut(s)	533, 799
PinAI	ACCGGT	1 cut(s)	806
PkrI	GCNGC	3 cut(s)	1450, 1749, 1927
Ple19I	CGATCG	1 cut(s)	244
PleI	GAGTC	5 cut(s)	205, 266, 973, 979, 1240
PmaCI	CACGTG	1 cut(s)	307
PmlI	CACGTG	1 cut(s)	307
PpsI	GAGTC	5 cut(s)	205, 266, 973, 979, 1240
Ppu21I	YACGTR	1 cut(s)	307
PshAI	GACNNNNGTC	1 cut(s)	676
PsiI	TTATAA	1 cut(s)	1455
Psp6I	CCWGG	2 cut(s)	533, 657
PspCI	CACGTG	1 cut(s)	307
PspGI	CCWGG	2 cut(s)	533, 657
PspN4I	GGNNCC	2 cut(s)	805, 1675
PspPI	GGNCC	3 cut(s)	351, 567, 1556
PstNI	CAGNNNCTG	2 cut(s)	650, 700
PsuI	RGATCY	3 cut(s)	647, 1519, 1673
PvuI	CGATCG	1 cut(s)	244
RsaI	GTAC	2 cut(s)	431, 1375
RsaNI	GTAC	2 cut(s)	430, 1374
RseI	CAYNNNNRTG	4 cut(s)	18, 859, 1582, 1668
Rsr2I	CGGWCCG	1 cut(s)	351
RsrII	CGGWCCG	1 cut(s)	351
SalI	GTCGAC	1 cut(s)	479
SapI	GCTCTTC	1 cut(s)	253
SaqAI	TTAA	3 cut(s)	1017, 1343, 1734
SatI	GCNGC	3 cut(s)	1449, 1748, 1926
Sau96I	GGNCC	3 cut(s)	351, 567, 1556
SchI	GAGTC	5 cut(s)	205, 266, 974, 979, 1241
ScrFI	CCNGG	6 cut(s)	225, 535, 571, 659, 801, 1468
SfaNI	GCATC	2 cut(s)	607, 618
SfcI	CTRYAG	1 cut(s)	1075
SgrDI	CGTCGACG	1 cut(s)	479
SinI	GGWCC	2 cut(s)	351, 1556
SmiMI	CAYNNNNRTG	4 cut(s)	18, 859, 1582, 1668
SmlI	CTYRAG	2 cut(s)	506, 665
SmoI	CTYRAG	2 cut(s)	506, 665
SspI	AATATT	1 cut(s)	1867
SspMI	CTAG	1 cut(s)	1964
StyD4I	CCNGG	6 cut(s)	223, 533, 569, 657, 799, 1466
StyI	CCWWGG	1 cut(s)	1530
TaaI	ACNGT	3 cut(s)	152, 179, 1079
TaiI	ACGT	2 cut(s)	309, 833
TaqI	TCGA	8 cut(s)	240, 335, 444, 480, 720, 839, 1248, 1881
TaqII	GACCGA	1 cut(s)	1380
TatI	WGTACW	2 cut(s)	429, 1373
TauI	GCSGC	1 cut(s)	1750
TfiI	GAWTC	5 cut(s)	186, 460, 489, 1286, 1351
Tru1I	TTAA	3 cut(s)	1017, 1343, 1734
Tru9I	TTAA	3 cut(s)	1017, 1343, 1734
TscAI	CASTG	5 cut(s)	52, 1008, 1029, 1427, 1636
TseFI	GTSAC	6 cut(s)	20, 179, 436, 875, 1462, 1573
TseI	GCWGC	2 cut(s)	1448, 1925
Tsp45I	GTSAC	6 cut(s)	20, 179, 436, 875, 1462, 1573
TspDTI	ATGAA	7 cut(s)	304, 431, 725, 1023, 1717, 1900, 1929
TspGWI	ACGGA	2 cut(s)	183, 466
TspRI	CASTG	5 cut(s)	52, 1008, 1029, 1427, 1636
VpaK11BI	GGWCC	2 cut(s)	351, 1556
XapI	RAATTY	3 cut(s)	157, 1174, 1213
XceI	RCATGY	1 cut(s)	1571
XcmI	CCANNNNNNNNNTGG	1 cut(s)	541
XmiI	GTMKAC	1 cut(s)	480
XmnI	GAANNNNTTC	2 cut(s)	1213, 1650
XspI	CTAG	1 cut(s)	1964
Zsp2I	ATGCAT	1 cut(s)	1115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.