Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0007283

Physical Location & Seq

Genomic Coordinates Forward (+)

1546148 .. 1549808

Gene Structure 3661 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g02570.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGATGAGCTGGCACTTTCGTGACTGCCCACAGAGAGAAGCTTCTCGCTCCAGCACAATATCGGCAACAAATTCTAACGGTTTGAATTTCCTCAACGGAAATAACCGTCACCGATTCCTCGGGAAGAAGAAGATGGCGACTCTGCAACTTCCGGGTTGCAGAGCTATCGATCGCTCTTCGCTTCCGCCGTTGATCAACGACTCTTGCTCTTCCTCCGCGTTCTGGGGACGACACGTTGCTTTCATCACCTCCCGTCGTTCCTCGACAGAGAAGCTCCGCTCCTACGGCGGAGCGTTTAGGATCGTGGCGAAGTCGGGCGGTTCGTCTGCGTCGTCGTTCAAGATGAACTTGAACGAGTACATGGTCACTCTCGACGAACCGCTCGGGATTCGGTTCGCGCTCTCCGTCGACGGCAGAATCTTCGTCCACGCCCTCAAGAAAGGGGGGAATGCGGAGAAGTCCAGGATAGTAATGGTGGGCGACACATTGAAAAAGGCCGGGGATTTGTCCGCCGGCCGGCTCGTTGAGGCCACCGATTTTGGTGATACACAGAAGATGCTGAAGGAGAAAACAGGATCTATTAGCCTGGTTCTTGAGAGACCCTTCTCTCCTTTTCCAATTCAGCAACTGCTTCTTATGAACGATCTCGATAATCTGTTCAACAGAGGTAGAGTTTCTTTTGCAACTTGGAACAAGGCTGTGCTGGCTTCAAGTTTGCAGTCATCTCCGGGAACCGGTGGGAACTCTGGCTTTGTTACGTTCTCCTCGAAGTTTCTGAAACCACGAGGATGGAATTATTTGAGTGACCAAAATGGTCATATTCAATCACATATGCAGAAGAATACTCTTGCCCAACCCCTGAGCCAGCTTGCTTGTATTTACGCTGAAGAGGAGTCCGGAGATGGAGAATGGGCTCATGGGAACTTCCCACTGGATGAATATGTTAAGGCACTGGATCGCTCTAAAGGCGAGCTATACTATAATCATGCTCTTGGTACGCGCTACAGTAAGATTACTGAACAAATATATGTTGGATCATGCATACAAACAGAAGATGATGTGGCGGTGTTGGCGAATGTGGCAGGAGTTACTGCTATACTGAATTTCCAAAGTGGATTTGAGACAGAAAATTGGGGAATAAATTCCAACGCAATAAATGAGTCATGCCAAAAGTTCGATATTCTGATGATCAACTATCCTATAAGGGATGGAGATTCTTTTGATTTGAGGAAGAAACTGCCATTCTGTGTGGGGTTATTATTACGCTTATTAAAGAAGAATCATCGTGTTTTTGTTACTTGTACAACTGGTTTTGATCGGTCTCCTGCTTGTGTAATAGCATACCTACACTGGATGACTGATACTTCCCTTCACGCAGCTTATAATTTTGTCACCGGGTTGCATTTATGTAAGCCTGACAGACCGGCAATTGCTTGGGCAACATGGGATCTTATAGCCATGGTGGAAAATGGGAAACATGATGGACCTCCAACACATGCTGTGACATTTGTATGGAATGGACAAGAGCGGGAGGATGTAACCTTAGTTGGAGATTTCACTGCAAACTGGAAAGAACCAATTCGGGCAACTCACAAAGGTGGATCCCGATGGGAAGCAGAAGTCAGACTTTCACAAGGAAAGTATTACTACAAGTTCATTGTTAATGGGAATTGGCGGCATTCAACATTGTCCCCATCTGAAAGGGATGGAAGTGGGAATGTCAACAATATAATCATTATTGGCGATACTGCCAGCGTGAGACCTTCTGTTCAACACCCGCAAAAGGTCAGATGTGAATATTGTGAAGGTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001871 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005791 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0006073 GO:0006091 GO:0006112 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009507 GO:0009532 GO:0009536 GO:0009569 GO:0009570 GO:0009987 GO:0012505 GO:0015980 GO:0016020 GO:0016052 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0030246 GO:0030247 GO:0030867 GO:0031090 GO:0031984 GO:0042175 GO:0042578 GO:0043036 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046838 GO:0055114 GO:0071704 GO:0098552 GO:0098554 GO:0098556 GO:0098562 GO:0098588 GO:0098827 GO:1901575 GO:2001069

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMPK1_CBM DSPc

Protein Analysis

605

Amino Acids

67.2

Weight (kDa)

8.91

Isoelectric Point (pI)

40.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01510 AT3G01510 AT3G01510
fragaria_vesca	FvH4_6g50790 FvH4_6g50790
malus_domestica	MD09G1032300.v1.1
prunus_persica	Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1
pyrus_communis	pycom111g02570 pycom17g03110 pycom17g03130
rosa_chinensis	RchiOBHm_Chr2g0172101 RchiOBHm_Chr2g0172181
rosa_laevigata	RLG00000022090
rosa_multiflora	Rmu_ssc0000252.1_g000048
rosa_roxburghii	Rroxscaffold_2G00080100
rosa_rugosa	Rorug02G0556900
rosa_samantha	Rh2AG632400 Rh2BG646000 Rh2CG612600 Rh2DG653400 Rh2DG660600
rosa_wichuraiana	Rw2G052350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1383
AccBSI	CCGCTC	3 cut(s)	279, 382, 1528
AccI	GTMKAC	1 cut(s)	408
AccII	CGCG	3 cut(s)	218, 398, 1000
AccIII	TCCGGA	1 cut(s)	896
AclWI	GGATC	7 cut(s)	308, 583, 963, 1042, 1455, 1596, 1609
AcoI	YGGCCR	1 cut(s)	514
AcsI	RAATTY	4 cut(s)	70, 85, 1102, 1141
AcuI	CTGAAG	2 cut(s)	581, 906
AfaI	GTAC	3 cut(s)	359, 997, 1303
AfiI	CCNNNNNNNGG	4 cut(s)	222, 516, 734, 1783
AflIII	ACRYGT	1 cut(s)	232
AgeI	ACCGGT	1 cut(s)	734
AgsI	TTSAA	9 cut(s)	85, 340, 352, 490, 661, 711, 824, 1683, 1772
AjnI	CCWGG	2 cut(s)	461, 585
AleI	CACNNNNGTG	2 cut(s)	18, 1596
AluBI	AGCT	7 cut(s)	9, 41, 164, 274, 868, 973, 1379
AluI	AGCT	7 cut(s)	9, 41, 164, 274, 868, 973, 1379
Alw26I	GTCTC	4 cut(s)	592, 1115, 1326, 1753
AlwI	GGATC	7 cut(s)	308, 583, 963, 1042, 1455, 1596, 1609
AlwNI	CAGNNNCTG	1 cut(s)	628
Ama87I	CYCGRG	2 cut(s)	119, 383
Aor13HI	TCCGGA	1 cut(s)	896
AoxI	GGCC	3 cut(s)	495, 514, 528
ApeKI	GCWGC	1 cut(s)	1376
ApoI	RAATTY	4 cut(s)	70, 85, 1102, 1141
AsiGI	ACCGGT	1 cut(s)	734
Asp700I	GAANNNNTTC	2 cut(s)	1141, 1578
AspLEI	GCGC	2 cut(s)	400, 1002
AspS9I	GGNCC	1 cut(s)	1484
AsuC2I	CCSGG	4 cut(s)	153, 499, 729, 1396
AsuHPI	GGTGA	4 cut(s)	101, 238, 554, 1384
AvaI	CYCGRG	2 cut(s)	119, 383
AvaII	GGWCC	1 cut(s)	1484
BamHI	GGATCC	1 cut(s)	1601
BanII	GRGCYC	1 cut(s)	916
BauI	CACGAG	1 cut(s)	783
BbvI	GCAGC	1 cut(s)	1388
BccI	CCATC	8 cut(s)	127, 783, 896, 1202, 1475, 1602, 1700, 1702
BceAI	ACGGC	3 cut(s)	172, 301, 427
BcgI	CGANNNNNNTGC	4 cut(s)	148, 182, 403, 437
BciT130I	CCWGG	2 cut(s)	463, 587
BclI	TGATCA	2 cut(s)	192, 1188
BcnI	CCSGG	4 cut(s)	153, 499, 729, 1396
BcoDI	GTCTC	4 cut(s)	592, 1115, 1326, 1753
BfmI	CTRYAG	1 cut(s)	1003
BisI	GCNGC	2 cut(s)	1377, 1676
BlsI	GCNGC	2 cut(s)	1378, 1677
Bme1390I	CCNGG	6 cut(s)	153, 463, 499, 587, 729, 1396
Bme18I	GGWCC	1 cut(s)	1484
BmeT110I	CYCGRG	2 cut(s)	119, 383
BmgT120I	GGNCC	1 cut(s)	1484
BmiI	GGNNCC	2 cut(s)	733, 1603
BmrFI	CCNGG	6 cut(s)	153, 463, 499, 587, 729, 1396
BmsI	GCATC	1 cut(s)	546
BpmI	CTGGAG	1 cut(s)	34
Bpu10I	CCTNAGC	1 cut(s)	860
BpuEI	CTTGAG	2 cut(s)	419, 614
BpuMI	CCSGG	4 cut(s)	153, 499, 729, 1396
Bsa29I	ATCGAT	1 cut(s)	168
BsaI	GGTCTC	3 cut(s)	592, 1326, 1753
BsaJI	CCNNGG	3 cut(s)	118, 498, 1458
BsaWI	WCCGGW	2 cut(s)	734, 896
Bsc4I	CCNNNNNNNGG	4 cut(s)	222, 516, 734, 1783
Bse118I	RCCGGY	4 cut(s)	512, 516, 734, 1423
Bse1I	ACTGG	5 cut(s)	936, 957, 1312, 1355, 1571
BseAI	TCCGGA	1 cut(s)	896
BseBI	CCWGG	2 cut(s)	463, 587
BseCI	ATCGAT	1 cut(s)	168
BseDI	CCNNGG	3 cut(s)	118, 498, 1458
BseGI	GGATG	6 cut(s)	794, 940, 1213, 1359, 1540, 1711
BseLI	CCNNNNNNNGG	4 cut(s)	222, 516, 734, 1783
BseMII	CTCAG	1 cut(s)	851
BseNI	ACTGG	5 cut(s)	936, 957, 1312, 1355, 1571
BseRI	GAGGAG	2 cut(s)	754, 905
BseX3I	CGGCCG	1 cut(s)	514
BseXI	GCAGC	1 cut(s)	1388
Bsh1236I	CGCG	3 cut(s)	218, 398, 1000
Bsh1285I	CGRYCG	2 cut(s)	172, 517
BshFI	GGCC	3 cut(s)	497, 516, 530
BshTI	ACCGGT	1 cut(s)	734
BshVI	ATCGAT	1 cut(s)	168
BsiEI	CGRYCG	2 cut(s)	172, 517
BsiHKCI	CYCGRG	2 cut(s)	119, 383
BsiSI	CCGG	9 cut(s)	152, 498, 513, 517, 728, 735, 897, 1395, 1424
BslFI	GGGAC	2 cut(s)	240, 1675
BslI	CCNNNNNNNGG	4 cut(s)	222, 516, 734, 1783
BsmAI	GTCTC	4 cut(s)	592, 1115, 1326, 1753
BsmFI	GGGAC	2 cut(s)	240, 1675
BsmI	GAATGC	2 cut(s)	454, 1678
BsnI	GGCC	3 cut(s)	497, 516, 530
Bso31I	GGTCTC	3 cut(s)	592, 1326, 1753
BsoBI	CYCGRG	2 cut(s)	119, 383
Bsp1286I	GDGCHC	1 cut(s)	916
Bsp13I	TCCGGA	1 cut(s)	896
Bsp1407I	TGTACA	1 cut(s)	1301
Bsp19I	CCATGG	1 cut(s)	1458
BspANI	GGCC	3 cut(s)	497, 516, 530
BspCNI	CTCAG	1 cut(s)	852
BspDI	ATCGAT	1 cut(s)	168
BspEI	TCCGGA	1 cut(s)	896
BspFNI	CGCG	3 cut(s)	218, 398, 1000
BspLI	GGNNCC	2 cut(s)	733, 1603
BspPI	GGATC	7 cut(s)	308, 583, 963, 1042, 1455, 1596, 1609
BspQI	GCTCTTC	2 cut(s)	181, 214
BspTNI	GGTCTC	3 cut(s)	592, 1326, 1753
BsrBI	CCGCTC	3 cut(s)	279, 382, 1528
BsrFI	RCCGGY	4 cut(s)	512, 516, 734, 1423
BsrGI	TGTACA	1 cut(s)	1301
BsrI	ACTGG	5 cut(s)	936, 957, 1312, 1355, 1571
BssAI	RCCGGY	4 cut(s)	512, 516, 734, 1423
BssECI	CCNNGG	3 cut(s)	118, 498, 1458
BssSI	CACGAG	1 cut(s)	783
BssT1I	CCWWGG	1 cut(s)	1458
Bst2BI	CACGAG	1 cut(s)	783
Bst2UI	CCWGG	2 cut(s)	463, 587
Bst4CI	ACNGT	3 cut(s)	80, 107, 1007
Bst6I	CTCTTC	3 cut(s)	181, 214, 882
BstAUI	TGTACA	1 cut(s)	1301
BstC8I	GCNNGC	8 cut(s)	11, 514, 518, 705, 866, 870, 971, 1753
BstDEI	CTNAG	2 cut(s)	860, 1543
BstDSI	CCRYGG	1 cut(s)	1458
BstF5I	GGATG	6 cut(s)	794, 940, 1213, 1359, 1540, 1711
BstFNI	CGCG	3 cut(s)	218, 398, 1000
BstHHI	GCGC	2 cut(s)	400, 1002
BstMAI	GTCTC	4 cut(s)	592, 1115, 1326, 1753
BstMCI	CGRYCG	2 cut(s)	172, 517
BstMWI	GCNNNNNNNGC	5 cut(s)	285, 704, 966, 1070, 1079
BstNI	CCWGG	2 cut(s)	463, 587
BstNSI	RCATGY	1 cut(s)	1499
BstSCI	CCNGG	6 cut(s)	151, 461, 497, 585, 727, 1394
BstSFI	CTRYAG	1 cut(s)	1003
BstUI	CGCG	3 cut(s)	218, 398, 1000
BstV1I	GCAGC	1 cut(s)	1388
BstX2I	RGATCY	3 cut(s)	575, 1447, 1601
BstXI	CCANNNNNNTGG	1 cut(s)	789
BstYI	RGATCY	3 cut(s)	575, 1447, 1601
BstZI	CGGCCG	1 cut(s)	514
Bsu15I	ATCGAT	1 cut(s)	168
BsuRI	GGCC	3 cut(s)	497, 516, 530
BsuTUI	ATCGAT	1 cut(s)	168
BtgI	CCRYGG	1 cut(s)	1458
BtsCI	GGATG	6 cut(s)	794, 940, 1213, 1359, 1540, 1711
BtsI	GCAGTG	1 cut(s)	1557
BtsIMutI	CAGTG	4 cut(s)	929, 950, 1348, 1557
Cac8I	GCNNGC	8 cut(s)	11, 514, 518, 705, 866, 870, 971, 1753
CaiI	CAGNNNCTG	1 cut(s)	628
CfoI	GCGC	2 cut(s)	400, 1002
Cfr10I	RCCGGY	4 cut(s)	512, 516, 734, 1423
Cfr13I	GGNCC	1 cut(s)	1484
ClaI	ATCGAT	1 cut(s)	168
CseI	GACGC	1 cut(s)	318
Csp6I	GTAC	3 cut(s)	358, 996, 1302
CspAI	ACCGGT	1 cut(s)	734
CspCI	CAANNNNNGTGG	2 cut(s)	520, 555
CviAII	CATG	9 cut(s)	361, 917, 986, 1038, 1164, 1443, 1459, 1478, 1496
CviQI	GTAC	3 cut(s)	358, 996, 1302
DdeI	CTNAG	2 cut(s)	860, 1543
EaeI	YGGCCR	1 cut(s)	514
EagI	CGGCCG	1 cut(s)	514
Eam1104I	CTCTTC	3 cut(s)	181, 214, 882
EarI	CTCTTC	3 cut(s)	181, 214, 882
EciI	GGCGGA	3 cut(s)	174, 303, 499
EclXI	CGGCCG	1 cut(s)	514
Eco130I	CCWWGG	1 cut(s)	1458
Eco24I	GRGCYC	1 cut(s)	916
Eco31I	GGTCTC	3 cut(s)	592, 1326, 1753
Eco47I	GGWCC	1 cut(s)	1484
Eco52I	CGGCCG	1 cut(s)	514
Eco57I	CTGAAG	2 cut(s)	581, 906
Eco88I	CYCGRG	2 cut(s)	119, 383
EcoRII	CCWGG	2 cut(s)	461, 585
EcoT14I	CCWWGG	1 cut(s)	1458
EcoT22I	ATGCAT	1 cut(s)	1043
EcoT38I	GRGCYC	1 cut(s)	916
ErhI	CCWWGG	1 cut(s)	1458
FaeI	CATG	9 cut(s)	364, 920, 989, 1041, 1167, 1446, 1462, 1481, 1499
FalI	AAGNNNNNCTT	4 cut(s)	332, 364, 1611, 1643
FaqI	GGGAC	2 cut(s)	240, 1675
FatI	CATG	9 cut(s)	360, 916, 985, 1037, 1163, 1442, 1458, 1477, 1495
FauI	CCCGC	2 cut(s)	1521, 1785
FauNDI	CATATG	1 cut(s)	831
FbaI	TGATCA	2 cut(s)	192, 1188
FblI	GTMKAC	1 cut(s)	408
Fnu4HI	GCNGC	2 cut(s)	1377, 1676
FokI	GGATG	6 cut(s)	801, 947, 1220, 1366, 1547, 1718
FriOI	GRGCYC	1 cut(s)	916
Fsp4HI	GCNGC	2 cut(s)	1377, 1676
GlaI	GCGC	2 cut(s)	399, 1001
GluI	GCNGC	2 cut(s)	1377, 1676
GsuI	CTGGAG	1 cut(s)	34
HaeIII	GGCC	3 cut(s)	497, 516, 530
HapII	CCGG	9 cut(s)	152, 498, 513, 517, 728, 735, 897, 1395, 1424
HgaI	GACGC	1 cut(s)	318
HhaI	GCGC	2 cut(s)	400, 1002
Hin1II	CATG	9 cut(s)	364, 920, 989, 1041, 1167, 1446, 1462, 1481, 1499
Hin6I	GCGC	2 cut(s)	398, 1000
HinP1I	GCGC	2 cut(s)	398, 1000
HincII	GTYRAC	2 cut(s)	409, 1723
HindII	GTYRAC	2 cut(s)	409, 1723
HindIII	AAGCTT	1 cut(s)	39
HinfI	GANTC	9 cut(s)	114, 139, 200, 388, 417, 893, 1160, 1214, 1279
HpaII	CCGG	9 cut(s)	152, 498, 513, 517, 728, 735, 897, 1395, 1424
HphI	GGTGA	4 cut(s)	101, 238, 554, 1384
Hpy166II	GTNNAC	3 cut(s)	409, 427, 1723
Hpy188I	TCNGA	5 cut(s)	777, 1185, 1625, 1699, 1790
Hpy8I	GTNNAC	3 cut(s)	409, 427, 1723
Hpy99I	CGWCG	6 cut(s)	258, 334, 337, 377, 410, 413
HpyAV	CCTTC	5 cut(s)	556, 613, 1379, 1773, 1799
HpyCH4III	ACNGT	3 cut(s)	80, 107, 1007
HpyCH4IV	ACGT	2 cut(s)	234, 758
HpyCH4V	TGCA	8 cut(s)	145, 159, 683, 718, 835, 1041, 1402, 1562
HpyF10VI	GCNNNNNNNGC	5 cut(s)	285, 704, 966, 1070, 1079
HpyF3I	CTNAG	2 cut(s)	860, 1543
HpySE526I	ACGT	2 cut(s)	234, 758
Hsp92II	CATG	9 cut(s)	364, 920, 989, 1041, 1167, 1446, 1462, 1481, 1499
HspAI	GCGC	2 cut(s)	398, 1000
Kpn2I	TCCGGA	1 cut(s)	896
KroI	GCCGGC	2 cut(s)	512, 516
KroNI	GCCGGC	2 cut(s)	514, 518
Ksp22I	TGATCA	2 cut(s)	192, 1188
LguI	GCTCTTC	2 cut(s)	181, 214
LmnI	GCTCC	4 cut(s)	53, 279, 284, 290
Lsp1109I	GCAGC	1 cut(s)	1388
LweI	GCATC	1 cut(s)	546
MaeII	ACGT	2 cut(s)	234, 758
MbiI	CCGCTC	3 cut(s)	279, 382, 1528
MfeI	CAATTG	1 cut(s)	1428
MflI	RGATCY	3 cut(s)	575, 1447, 1601
MhlI	GDGCHC	1 cut(s)	916
MlyI	GAGTC	4 cut(s)	133, 194, 902, 1169
MmeI	TCCRAC	4 cut(s)	1012, 1170, 1514, 1528
Mph1103I	ATGCAT	1 cut(s)	1043
MroI	TCCGGA	1 cut(s)	896
MroNI	GCCGGC	2 cut(s)	512, 516
MroXI	GAANNNNTTC	2 cut(s)	1141, 1578
MseI	TTAA	3 cut(s)	945, 1271, 1662
MslI	CAYNNNNRTG	4 cut(s)	18, 787, 1510, 1596
MspI	CCGG	9 cut(s)	152, 498, 513, 517, 728, 735, 897, 1395, 1424
MspR9I	CCNGG	6 cut(s)	153, 463, 499, 587, 729, 1396
MunI	CAATTG	1 cut(s)	1428
Mva1269I	GAATGC	2 cut(s)	454, 1678
MvaI	CCWGG	2 cut(s)	463, 587
MvnI	CGCG	3 cut(s)	218, 398, 1000
MwoI	GCNNNNNNNGC	5 cut(s)	285, 704, 966, 1070, 1079
NaeI	GCCGGC	2 cut(s)	514, 518
NciI	CCSGG	4 cut(s)	153, 499, 729, 1396
NcoI	CCATGG	1 cut(s)	1458
NdeI	CATATG	1 cut(s)	831
NgoMIV	GCCGGC	2 cut(s)	512, 516
NlaIII	CATG	9 cut(s)	364, 920, 989, 1041, 1167, 1446, 1462, 1481, 1499
NlaIV	GGNNCC	2 cut(s)	733, 1603
NmuCI	GTSAC	6 cut(s)	20, 107, 364, 803, 1390, 1501
NsiI	ATGCAT	1 cut(s)	1043
NspI	RCATGY	1 cut(s)	1499
OliI	CACNNNNGTG	2 cut(s)	18, 1596
PciSI	GCTCTTC	2 cut(s)	181, 214
PcsI	WCGNNNNNNNCGW	5 cut(s)	185, 320, 329, 402, 764
PctI	GAATGC	2 cut(s)	454, 1678
PdiI	GCCGGC	2 cut(s)	514, 518
PdmI	GAANNNNTTC	2 cut(s)	1141, 1578
PfeI	GAWTC	5 cut(s)	114, 388, 417, 1214, 1279
PfoI	TCCNGGA	2 cut(s)	461, 727
PinAI	ACCGGT	1 cut(s)	734
PkrI	GCNGC	2 cut(s)	1378, 1677
Ple19I	CGATCG	1 cut(s)	172
PleI	GAGTC	4 cut(s)	133, 194, 901, 1168
PpsI	GAGTC	4 cut(s)	133, 194, 901, 1168
PsiI	TTATAA	1 cut(s)	1383
Psp6I	CCWGG	2 cut(s)	461, 585
PspGI	CCWGG	2 cut(s)	461, 585
PspN4I	GGNNCC	2 cut(s)	733, 1603
PspPI	GGNCC	1 cut(s)	1484
PstNI	CAGNNNCTG	1 cut(s)	628
PsuI	RGATCY	3 cut(s)	575, 1447, 1601
PvuI	CGATCG	1 cut(s)	172
RsaI	GTAC	3 cut(s)	359, 997, 1303
RsaNI	GTAC	3 cut(s)	358, 996, 1302
RseI	CAYNNNNRTG	4 cut(s)	18, 787, 1510, 1596
SalI	GTCGAC	1 cut(s)	407
SapI	GCTCTTC	2 cut(s)	181, 214
SaqAI	TTAA	3 cut(s)	945, 1271, 1662
SatI	GCNGC	2 cut(s)	1377, 1676
Sau96I	GGNCC	1 cut(s)	1484
SchI	GAGTC	4 cut(s)	133, 194, 902, 1169
ScrFI	CCNGG	6 cut(s)	153, 463, 499, 587, 729, 1396
SduI	GDGCHC	1 cut(s)	916
SfaNI	GCATC	1 cut(s)	546
SfcI	CTRYAG	1 cut(s)	1003
SgrDI	CGTCGACG	1 cut(s)	407
SinI	GGWCC	1 cut(s)	1484
SmiMI	CAYNNNNRTG	4 cut(s)	18, 787, 1510, 1596
SmlI	CTYRAG	2 cut(s)	434, 593
SmoI	CTYRAG	2 cut(s)	434, 593
SspI	AATATT	1 cut(s)	1799
StyD4I	CCNGG	6 cut(s)	151, 461, 497, 585, 727, 1394
StyI	CCWWGG	1 cut(s)	1458
TaaI	ACNGT	3 cut(s)	80, 107, 1007
TaiI	ACGT	2 cut(s)	237, 761
TaqI	TCGA	7 cut(s)	168, 263, 372, 408, 648, 767, 1176
TaqII	GACCGA	1 cut(s)	1308
TatI	WGTACW	2 cut(s)	357, 1301
TauI	GCSGC	1 cut(s)	1678
TfiI	GAWTC	5 cut(s)	114, 388, 417, 1214, 1279
Tru1I	TTAA	3 cut(s)	945, 1271, 1662
Tru9I	TTAA	3 cut(s)	945, 1271, 1662
TscAI	CASTG	4 cut(s)	936, 957, 1355, 1564
TseFI	GTSAC	6 cut(s)	20, 107, 364, 803, 1390, 1501
TseI	GCWGC	1 cut(s)	1376
Tsp45I	GTSAC	6 cut(s)	20, 107, 364, 803, 1390, 1501
TspDTI	ATGAA	5 cut(s)	232, 359, 653, 951, 1645
TspGWI	ACGGA	2 cut(s)	111, 394
TspRI	CASTG	4 cut(s)	936, 957, 1355, 1564
VpaK11BI	GGWCC	1 cut(s)	1484
XapI	RAATTY	4 cut(s)	70, 85, 1102, 1141
XceI	RCATGY	1 cut(s)	1499
XcmI	CCANNNNNNNNNTGG	1 cut(s)	469
XmiI	GTMKAC	1 cut(s)	408
XmnI	GAANNNNTTC	2 cut(s)	1141, 1578
Zsp2I	ATGCAT	1 cut(s)	1043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.