Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007283

Physical Location & Seq

Genomic Coordinates Forward (+)

2977277 .. 2981512

Gene Structure 4236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00080100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGTTCACTCTGCAACTTCCGAGTTGCATAGCTCTCGATCGCTCGCCGCCGCCATTGCTCCGCGGCGGCTCCTCGTTTTGGGGGACGGCGGTCATCAATTTCGATGGCAGATCCACGGCTGAGAAGAAGCTCCGGTTCGACGGACGGAAGGTCAGGATCGTGGCGATGTCGTCGTGGAGCAGCAACAACACTTTCAAGATGAACTTGAACGAGTACATGGTCACTCTTGAGAAGCCGCTCGGAATCCGCTTCGCGCTCTCCGTCGACGGCAAAATCTTCGTCCACGCCCTCAAGAAAGGGGGGAATGCGGAGAAGTCCAGGATAGTAATGGTGGGCGACACTTTGAAAAAGGCGGGTAATTCGTCCGAAGGGAGGCTTATTGAGACCAAGGACTTCGGTGATACACAGAAGATGCTGAAGGAGAAGACAGGATCTTATAGTCTTGTTCTTGAGAGGCCATTTTCTCCCTTTCCAATTCAACAGCTGCTTCTTATGAATGATCTTGATAATCTATTCAATAGAGGTCGAGTTCCTTTTGCAACTTGGAACAACAGTGTATTGGCTTCAAATTTGCAATCATCTGCTGGAAGCAGTGGCAATTCTGGTTTTGTCACGTTCTCCTCAAAGTTTCTAAAACCACAAGGATGGAATTCCTTGAATGGAAATGGTCATGTTCAACCAACAGTGCAGAGGAACACTACTGCCAAACCCATAAGCCAACTGGTTTGTATTCTGTCCGAAGAGGAGCCTGGAGATGGAGAATGGGCTTATGGAAATTTTCCACTAGAAGAATATATTAAAGCACTGGATCGCTCAAAAGGCGAATTATATTATGATCACTCACTTGGTATGCGCTATAGTAAGATAACAGAGCAAATATATGTCGGGTCATGTATACAAACAGAAGATGATGTGGAGGCATTGTCAAATGCTGCAGGAATTACTGCTATACTAAATTTTCAAACTGGAACCGAGACACAAAACTGGGGAATCAATTCCAATTCAATAAATGAGTCATGTCAGAAGTTTGATATTCTGATGATCAACTATCCAATAAGGGATGGAGATTCTTTTGATTTGAGGAAGAAACTACCTTTTTGCGTGGGGCTATTATTACGTTTATTGAAAAAGAATCATCGTGTTTATGTCACTTGTACCAGTGGTTTTGATCGATCTCCTACTTGCGTGATAGCATACTTGCATTGGATGACTGATACTTCCCTTCATGCAGCGTATAATTTTGTTACTGGGTTGCATTTATGTAGGCCTGACAGACCGGCAATTGCTTGGGCAACATGGGATCTTATAGCCATGGTGGAAAAAGGTAAACATGATGGACCTGCAACACATGCTGTCACATTTGTATGGAATGGACAAGAGGGGGAGGATGTAAATTTGGTTGGAGATTTCACGAATAATTGGAAAGATCCAATTCGGGCAAATCACAAAGGTGGATCACGATCAGAAGCGGAAGTTAGACTTTCACAAGGAAAGTATTACTACAAGTTCATTGTCAATGGGCAATGGCGACATTCAACATCCTCCCCAGCTGAAAGGGATGACAGCGGGAATGTCAACAATGTAATCGTAATCGGTGATACAGCCAGTGTGAGACCTTCTGTTCAACAACAGCAAAAAGATGCAAATATTATCAAGGTGATTGAGAGACCGTTGACAGAAAATGAGCGCTTCATGCTGGCAAAAGCAGCTCGTTGTGTTGCATTTTCTATATGCCCTATTAGACTGGCTCCAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001871 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005791 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0006073 GO:0006091 GO:0006112 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009507 GO:0009532 GO:0009536 GO:0009569 GO:0009570 GO:0009987 GO:0012505 GO:0015980 GO:0016020 GO:0016052 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0030246 GO:0030247 GO:0030867 GO:0031090 GO:0031984 GO:0042175 GO:0042578 GO:0043036 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046838 GO:0055114 GO:0071704 GO:0098552 GO:0098554 GO:0098556 GO:0098562 GO:0098588 GO:0098827 GO:1901575 GO:2001069

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMPK1_CBM DSPc

Protein Analysis

585

Amino Acids

65.22

Weight (kDa)

8.89

Isoelectric Point (pI)

37.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	294 - 416	1.1e-10	Dual specificity phosphatase, catalytic domain
AMPK1_CBM	PF16561	452 - 533	3.5e-19	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01510 AT3G01510 AT3G01510
fragaria_vesca	FvH4_6g50790 FvH4_6g50790
malus_domestica	MD09G1032300.v1.1
prunus_persica	Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1 Prupe.3G285700_v2.0.a1
pyrus_communis	pycom111g02570 pycom17g03110 pycom17g03130
rosa_chinensis	RchiOBHm_Chr2g0172101 RchiOBHm_Chr2g0172181
rosa_laevigata	RLG00000022090
rosa_multiflora	Rmu_ssc0000252.1_g000048
rosa_roxburghii	Rroxscaffold_2G00080100
rosa_rugosa	Rorug02G0556900
rosa_samantha	Rh2AG632400 Rh2BG646000 Rh2CG612600 Rh2DG653400 Rh2DG660600
rosa_wichuraiana	Rw2G052350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1348
AccBSI	CCGCTC	1 cut(s)	238
AccI	GTMKAC	2 cut(s)	264, 895
AccII	CGCG	2 cut(s)	63, 254
AclWI	GGATC	7 cut(s)	105, 164, 439, 816, 1308, 1421, 1462
AcsI	RAATTY	5 cut(s)	568, 649, 775, 955, 1393
AcuI	CTGAAG	1 cut(s)	437
AfaI	GTAC	2 cut(s)	215, 1156
AfeI	AGCGCT	1 cut(s)	1688
AfiI	CCNNNNNNNGG	3 cut(s)	78, 372, 755
AhdI	GACNNNNNGTC	1 cut(s)	149
AjnI	CCWGG	2 cut(s)	317, 748
AleI	CACNNNNGTG	1 cut(s)	1449
AluBI	AGCT	5 cut(s)	32, 130, 484, 1550, 1709
AluI	AGCT	5 cut(s)	32, 130, 484, 1550, 1709
Alw26I	GTCTC	4 cut(s)	377, 968, 1606, 1660
AlwI	GGATC	7 cut(s)	105, 164, 439, 816, 1308, 1421, 1462
Aor51HI	AGCGCT	1 cut(s)	1688
AoxI	GGCC	2 cut(s)	455, 1265
ApeKI	GCWGC	5 cut(s)	180, 484, 932, 1229, 1706
ApoI	RAATTY	5 cut(s)	568, 649, 775, 955, 1393
ArsI	GACNNNNNNTTYG	2 cut(s)	264, 296
Asp700I	GAANNNNTTC	1 cut(s)	994
AspLEI	GCGC	3 cut(s)	256, 855, 1689
AspS9I	GGNCC	1 cut(s)	1337
AsuHPI	GGTGA	3 cut(s)	410, 1607, 1669
AvaII	GGWCC	1 cut(s)	1337
BbsI	GAAGAC	1 cut(s)	431
BbvI	GCAGC	5 cut(s)	192, 471, 919, 1241, 1718
BccI	CCATC	5 cut(s)	98, 639, 749, 1055, 1328
BceAI	ACGGC	3 cut(s)	102, 132, 283
BcgI	CGANNNNNNTGC	4 cut(s)	16, 50, 259, 293
BciT130I	CCWGG	2 cut(s)	319, 750
BclI	TGATCA	2 cut(s)	835, 1041
BcoDI	GTCTC	4 cut(s)	377, 968, 1606, 1660
BfaI	CTAG	1 cut(s)	785
BfmI	CTRYAG	2 cut(s)	856, 933
BfoI	RGCGCY	1 cut(s)	1690
BfuAI	ACCTGC	1 cut(s)	1348
Bme1390I	CCNGG	2 cut(s)	319, 750
Bme18I	GGWCC	1 cut(s)	1337
BmeRI	GACNNNNNGTC	1 cut(s)	149
BmgT120I	GGNCC	1 cut(s)	1337
BmiI	GGNNCC	4 cut(s)	70, 747, 970, 1749
BmrFI	CCNGG	2 cut(s)	319, 750
BmrI	ACTGGG	2 cut(s)	994, 1257
BmsI	GCATC	2 cut(s)	402, 1630
BmuI	ACTGGG	2 cut(s)	994, 1257
BoxI	GACNNNNGTC	1 cut(s)	89
BpiI	GAAGAC	1 cut(s)	431
BpmI	CTGGAG	1 cut(s)	771
BpuEI	CTTGAG	3 cut(s)	248, 275, 470
Bsa29I	ATCGAT	1 cut(s)	1171
BsaBI	GATNNNNATC	1 cut(s)	1459
BsaI	GGTCTC	3 cut(s)	377, 1606, 1660
BsaJI	CCNNGG	4 cut(s)	61, 114, 387, 1311
BsaWI	WCCGGW	1 cut(s)	132
BsaXI	ACNNNNNCTCC	2 cut(s)	908, 938
Bsc4I	CCNNNNNNNGG	3 cut(s)	78, 372, 755
Bse118I	RCCGGY	1 cut(s)	1276
Bse1I	ACTGG	8 cut(s)	726, 810, 970, 989, 1158, 1252, 1605, 1749
Bse3DI	GCAATG	2 cut(s)	53, 1529
Bse8I	GATNNNNATC	1 cut(s)	1459
BseBI	CCWGG	2 cut(s)	319, 750
BseCI	ATCGAT	1 cut(s)	1171
BseDI	CCNNGG	4 cut(s)	61, 114, 387, 1311
BseGI	GGATG	6 cut(s)	650, 1066, 1212, 1393, 1538, 1564
BseJI	GATNNNNATC	1 cut(s)	1459
BseLI	CCNNNNNNNGG	3 cut(s)	78, 372, 755
BseMI	GCAATG	2 cut(s)	53, 1529
BseMII	CTCAG	1 cut(s)	111
BseNI	ACTGG	8 cut(s)	726, 810, 970, 989, 1158, 1252, 1605, 1749
BseRI	GAGGAG	3 cut(s)	61, 610, 758
BseXI	GCAGC	5 cut(s)	192, 471, 919, 1241, 1718
BseYI	CCCAGC	1 cut(s)	1546
BsgI	GTGCAG	1 cut(s)	707
Bsh1236I	CGCG	2 cut(s)	63, 254
Bsh1285I	CGRYCG	1 cut(s)	40
BshFI	GGCC	2 cut(s)	457, 1267
BshVI	ATCGAT	1 cut(s)	1171
BsiEI	CGRYCG	1 cut(s)	40
BsiSI	CCGG	2 cut(s)	133, 1277
BslFI	GGGAC	1 cut(s)	97
BslI	CCNNNNNNNGG	3 cut(s)	78, 372, 755
BsmAI	GTCTC	4 cut(s)	377, 968, 1606, 1660
BsmFI	GGGAC	1 cut(s)	97
BsmI	GAATGC	1 cut(s)	310
BsnI	GGCC	2 cut(s)	457, 1267
Bso31I	GGTCTC	3 cut(s)	377, 1606, 1660
Bsp19I	CCATGG	1 cut(s)	1311
BspANI	GGCC	2 cut(s)	457, 1267
BspCNI	CTCAG	1 cut(s)	112
BspDI	ATCGAT	1 cut(s)	1171
BspFNI	CGCG	2 cut(s)	63, 254
BspLI	GGNNCC	4 cut(s)	70, 747, 970, 1749
BspMAI	CTGCAG	1 cut(s)	937
BspMI	ACCTGC	1 cut(s)	1348
BspPI	GGATC	7 cut(s)	105, 164, 439, 816, 1308, 1421, 1462
BspTNI	GGTCTC	3 cut(s)	377, 1606, 1660
BsrBI	CCGCTC	1 cut(s)	238
BsrDI	GCAATG	2 cut(s)	53, 1529
BsrFI	RCCGGY	1 cut(s)	1276
BsrI	ACTGG	8 cut(s)	726, 810, 970, 989, 1158, 1252, 1605, 1749
BssAI	RCCGGY	1 cut(s)	1276
BssECI	CCNNGG	4 cut(s)	61, 114, 387, 1311
BssNAI	GTATAC	1 cut(s)	896
BssT1I	CCWWGG	2 cut(s)	387, 1311
Bst1107I	GTATAC	1 cut(s)	896
Bst2UI	CCWGG	2 cut(s)	319, 750
Bst4CI	ACNGT	3 cut(s)	554, 685, 1671
Bst6I	CTCTTC	1 cut(s)	735
BstAPI	GCANNNNNTGC	1 cut(s)	1349
BstC8I	GCNNGC	2 cut(s)	44, 1698
BstDEI	CTNAG	1 cut(s)	120
BstDSI	CCRYGG	3 cut(s)	61, 114, 1311
BstF5I	GGATG	6 cut(s)	650, 1066, 1212, 1393, 1538, 1564
BstFNI	CGCG	2 cut(s)	63, 254
BstH2I	RGCGCY	1 cut(s)	1690
BstHHI	GCGC	3 cut(s)	256, 855, 1689
BstMAI	GTCTC	4 cut(s)	377, 968, 1606, 1660
BstMCI	CGRYCG	1 cut(s)	40
BstMWI	GCNNNNNNNGC	5 cut(s)	55, 819, 1349, 1693, 1706
BstNI	CCWGG	2 cut(s)	319, 750
BstNSI	RCATGY	1 cut(s)	1352
BstPAI	GACNNNNGTC	1 cut(s)	89
BstSCI	CCNGG	2 cut(s)	317, 748
BstSFI	CTRYAG	2 cut(s)	856, 933
BstUI	CGCG	2 cut(s)	63, 254
BstV1I	GCAGC	5 cut(s)	192, 471, 919, 1241, 1718
BstV2I	GAAGAC	1 cut(s)	431
BstX2I	RGATCY	4 cut(s)	110, 431, 1300, 1426
BstXI	CCANNNNNNTGG	1 cut(s)	645
BstYI	RGATCY	4 cut(s)	110, 431, 1300, 1426
BstZ17I	GTATAC	1 cut(s)	896
Bsu15I	ATCGAT	1 cut(s)	1171
BsuRI	GGCC	2 cut(s)	457, 1267
BsuTUI	ATCGAT	1 cut(s)	1171
BtgI	CCRYGG	3 cut(s)	61, 114, 1311
BtgZI	GCGATG	1 cut(s)	179
BtsCI	GGATG	6 cut(s)	650, 1066, 1212, 1393, 1538, 1564
BtsI	GCAGTG	1 cut(s)	598
BtsIMutI	CAGTG	6 cut(s)	559, 598, 690, 803, 1165, 1612
BveI	ACCTGC	1 cut(s)	1348
Cac8I	GCNNGC	2 cut(s)	44, 1698
CfoI	GCGC	3 cut(s)	256, 855, 1689
Cfr10I	RCCGGY	1 cut(s)	1276
Cfr13I	GGNCC	1 cut(s)	1337
Cfr42I	CCGCGG	1 cut(s)	64
ClaI	ATCGAT	1 cut(s)	1171
Csp6I	GTAC	2 cut(s)	214, 1155
CviQI	GTAC	2 cut(s)	214, 1155
DdeI	CTNAG	1 cut(s)	120
DriI	GACNNNNNGTC	1 cut(s)	149
Eam1104I	CTCTTC	1 cut(s)	735
Eam1105I	GACNNNNNGTC	1 cut(s)	149
EarI	CTCTTC	1 cut(s)	735
Eco130I	CCWWGG	2 cut(s)	387, 1311
Eco147I	AGGCCT	1 cut(s)	1267
Eco31I	GGTCTC	3 cut(s)	377, 1606, 1660
Eco47I	GGWCC	1 cut(s)	1337
Eco47III	AGCGCT	1 cut(s)	1688
Eco57I	CTGAAG	1 cut(s)	437
EcoRI	GAATTC	1 cut(s)	649
EcoRII	CCWGG	2 cut(s)	317, 748
EcoT14I	CCWWGG	2 cut(s)	387, 1311
ErhI	CCWWGG	2 cut(s)	387, 1311
FalI	AAGNNNNNCTT	6 cut(s)	188, 220, 360, 392, 1464, 1496
FaqI	GGGAC	1 cut(s)	97
FauI	CCCGC	2 cut(s)	346, 1559
FbaI	TGATCA	2 cut(s)	835, 1041
FblI	GTMKAC	2 cut(s)	264, 895
FokI	GGATG	6 cut(s)	657, 1073, 1219, 1400, 1525, 1571
FspBI	CTAG	1 cut(s)	785
GlaI	GCGC	3 cut(s)	255, 854, 1688
GsaI	CCCAGC	1 cut(s)	1550
GsuI	CTGGAG	1 cut(s)	771
HaeII	RGCGCY	1 cut(s)	1690
HaeIII	GGCC	2 cut(s)	457, 1267
HapII	CCGG	2 cut(s)	133, 1277
HhaI	GCGC	3 cut(s)	256, 855, 1689
Hin6I	GCGC	3 cut(s)	254, 853, 1687
HinP1I	GCGC	3 cut(s)	254, 853, 1687
HincII	GTYRAC	3 cut(s)	265, 1576, 1674
HindII	GTYRAC	3 cut(s)	265, 1576, 1674
HinfI	GANTC	5 cut(s)	243, 990, 1013, 1067, 1132
HpaII	CCGG	2 cut(s)	133, 1277
HphI	GGTGA	3 cut(s)	410, 1607, 1669
Hpy166II	GTNNAC	7 cut(s)	6, 265, 283, 896, 1328, 1576, 1674
Hpy188I	TCNGA	7 cut(s)	21, 242, 367, 739, 1023, 1038, 1465
Hpy188III	TCNNGA	9 cut(s)	35, 154, 196, 227, 292, 449, 503, 1411, 1458
Hpy8I	GTNNAC	7 cut(s)	6, 265, 283, 896, 1328, 1576, 1674
Hpy99I	CGWCG	4 cut(s)	143, 175, 266, 269
HpyAV	CCTTC	5 cut(s)	142, 362, 412, 1232, 1626
HpyCH4III	ACNGT	3 cut(s)	554, 685, 1671
HpyCH4IV	ACGT	2 cut(s)	614, 1117
HpyF10VI	GCNNNNNNNGC	5 cut(s)	55, 819, 1349, 1693, 1706
HpyF3I	CTNAG	1 cut(s)	120
HpySE526I	ACGT	2 cut(s)	614, 1117
HspAI	GCGC	3 cut(s)	254, 853, 1687
Ksp22I	TGATCA	2 cut(s)	835, 1041
KspI	CCGCGG	1 cut(s)	64
LmnI	GCTCC	6 cut(s)	63, 74, 135, 177, 745, 1753
Lsp1109I	GCAGC	5 cut(s)	192, 471, 919, 1241, 1718
LweI	GCATC	2 cut(s)	402, 1630
MaeI	CTAG	1 cut(s)	785
MaeII	ACGT	2 cut(s)	614, 1117
MaeIII	GTNAC	5 cut(s)	220, 610, 1147, 1243, 1354
MbiI	CCGCTC	1 cut(s)	238
MboII	GAAGA	8 cut(s)	136, 268, 421, 436, 752, 800, 917, 1096
MfeI	CAATTG	1 cut(s)	1281
MflI	RGATCY	4 cut(s)	110, 431, 1300, 1426
MlyI	GAGTC	1 cut(s)	1022
MmeI	TCCRAC	1 cut(s)	1381
MroXI	GAANNNNTTC	1 cut(s)	994
MseI	TTAA	1 cut(s)	798
MslI	CAYNNNNRTG	3 cut(s)	643, 1363, 1449
MspA1I	CMGCKG	4 cut(s)	63, 484, 1550, 1566
MspI	CCGG	2 cut(s)	133, 1277
MspR9I	CCNGG	2 cut(s)	319, 750
MunI	CAATTG	1 cut(s)	1281
Mva1269I	GAATGC	1 cut(s)	310
MvaI	CCWGG	2 cut(s)	319, 750
MvnI	CGCG	2 cut(s)	63, 254
MwoI	GCNNNNNNNGC	5 cut(s)	55, 819, 1349, 1693, 1706
NcoI	CCATGG	1 cut(s)	1311
NlaIV	GGNNCC	4 cut(s)	70, 747, 970, 1749
NmuCI	GTSAC	4 cut(s)	220, 610, 1147, 1354
NspI	RCATGY	1 cut(s)	1352
OliI	CACNNNNGTG	1 cut(s)	1449
PceI	AGGCCT	1 cut(s)	1267
PcsI	WCGNNNNNNNCGW	1 cut(s)	258
PctI	GAATGC	1 cut(s)	310
PdmI	GAANNNNTTC	1 cut(s)	994
PfeI	GAWTC	4 cut(s)	243, 990, 1067, 1132
PfoI	TCCNGGA	1 cut(s)	317
Ple19I	CGATCG	1 cut(s)	40
PleI	GAGTC	1 cut(s)	1021
PpsI	GAGTC	1 cut(s)	1021
PshAI	GACNNNNGTC	1 cut(s)	89
Psp6I	CCWGG	2 cut(s)	317, 748
PspFI	CCCAGC	1 cut(s)	1546
PspGI	CCWGG	2 cut(s)	317, 748
PspN4I	GGNNCC	4 cut(s)	70, 747, 970, 1749
PspPI	GGNCC	1 cut(s)	1337
PstI	CTGCAG	1 cut(s)	937
PsuI	RGATCY	4 cut(s)	110, 431, 1300, 1426
PvuI	CGATCG	1 cut(s)	40
PvuII	CAGCTG	2 cut(s)	484, 1550
RsaI	GTAC	2 cut(s)	215, 1156
RsaNI	GTAC	2 cut(s)	214, 1155
RseI	CAYNNNNRTG	3 cut(s)	643, 1363, 1449
SacII	CCGCGG	1 cut(s)	64
SalI	GTCGAC	1 cut(s)	263
SaqAI	TTAA	1 cut(s)	798
Sau96I	GGNCC	1 cut(s)	1337
SchI	GAGTC	1 cut(s)	1022
ScrFI	CCNGG	2 cut(s)	319, 750
SfaNI	GCATC	2 cut(s)	402, 1630
SfcI	CTRYAG	2 cut(s)	856, 933
Sfr303I	CCGCGG	1 cut(s)	64
SgrBI	CCGCGG	1 cut(s)	64
SgrDI	CGTCGACG	1 cut(s)	263
SinI	GGWCC	1 cut(s)	1337
SmiMI	CAYNNNNRTG	3 cut(s)	643, 1363, 1449
SmlI	CTYRAG	3 cut(s)	227, 290, 449
SmoI	CTYRAG	3 cut(s)	227, 290, 449
SseBI	AGGCCT	1 cut(s)	1267
SspI	AATATT	1 cut(s)	1648
SspMI	CTAG	1 cut(s)	785
StuI	AGGCCT	1 cut(s)	1267
StyD4I	CCNGG	2 cut(s)	317, 748
StyI	CCWWGG	2 cut(s)	387, 1311
TaaI	ACNGT	3 cut(s)	554, 685, 1671
TaiI	ACGT	2 cut(s)	617, 1120
TaqI	TCGA	6 cut(s)	36, 102, 138, 264, 526, 1171
TatI	WGTACW	1 cut(s)	213
TauI	GCSGC	5 cut(s)	49, 52, 66, 69, 238
TfiI	GAWTC	4 cut(s)	243, 990, 1067, 1132
Tru1I	TTAA	1 cut(s)	798
Tru9I	TTAA	1 cut(s)	798
TscAI	CASTG	6 cut(s)	559, 598, 690, 810, 1165, 1612
TseFI	GTSAC	4 cut(s)	220, 610, 1147, 1354
TseI	GCWGC	5 cut(s)	180, 484, 932, 1229, 1706
Tsp45I	GTSAC	4 cut(s)	220, 610, 1147, 1354
TspDTI	ATGAA	5 cut(s)	215, 509, 1214, 1498, 1681
TspGWI	ACGGA	3 cut(s)	156, 160, 250
TspRI	CASTG	6 cut(s)	559, 598, 690, 810, 1165, 1612
VpaK11BI	GGWCC	1 cut(s)	1337
XapI	RAATTY	5 cut(s)	568, 649, 775, 955, 1393
XceI	RCATGY	1 cut(s)	1352
XcmI	CCANNNNNNNNNTGG	2 cut(s)	325, 718
XmiI	GTMKAC	2 cut(s)	264, 895
XmnI	GAANNNNTTC	1 cut(s)	994
XspI	CTAG	1 cut(s)	785

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.