Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0008793

Physical Location & Seq

Genomic Coordinates Forward (+)

3207294 .. 3210248

Gene Structure 2955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1048800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1308 bp

ATGGCAGTTGAGGTCCTTGGCGCGCACCGGATTATATCTCCAAGACTCCATAGACGAAAAAGAAAGATGGCTGCTGGTGTGCTGCATTCTGCTTCCTTGGCCGGAATCTGCTCCTTCACTCCCACCACAGATAAATGGAACATTTGCAGATTGATTTCATCGCACAGACACTCAATGGTTTCCCAGAACTCTTCCTCCGCCGCCGCTATTGGGTTTTCCACGACGTCGTCTTCGGGGACGTACGGCGAGTCGAAGAGGGTGTGGGTGTGGACGGAGAGCAAGCAGGTCATGACGGCCGCCGTCGAGAGAGGCTGGAACACCTTCGTCTTCCCCTCTCAAAGCCGTGAACTTGCCGATGAGTGGTCCTCAATTGCATTGATAGATACTCTCTTTATCGAAGAGGGAGCGATTTTGGATGGTGAGAACAGAAGAGTTGCCACAATGCTTGAGGTCGCCAACCCCAAGGAGTTGGAGCTGCTTCAACCCGAAAAAGCGCTTGGCGAAAATTTAGTTGTTGATTTGCTAGATTGGCAGGTCATACCTGCAGAGAATATAGTTGCTGCATTTCAAGGGAGTGGGAAAACAGTGTTTGCTGTTTCGAAAACCGCATTGGAAGCTCAAGTCTTCTTTGAGGCCCTCGAGCATGGTTTGGGTGGAGTTATCTTAAAAATTGAAGAAGTAAAAGCTCTTCTCGACCTAAAGGACTATTTTGACAGAAGAGATGAAGTGAGCAACATATTGAGCCTGACAAAAGCCGTTGTAAATCGAGTCCAAGTAGCTGGAATGGGGGATCGAGTTTGCATTGATCTCTGTAGTCTCATGAGGCCCGGGGAAGGACTACTTGTTGGCTCCTTTGCCAGAGGATTATTCCTCGTTCATTCGGAGTGCTTGGAATCAAATTACATTGCAAGCAGGCCTTTTCGTGTGAATGCGGGACCTGTGCATGCTTATGTTGCTGTTCCAGGCGGAAAAACGAGCTACCTCTCAGAATTGAAAGCAGGTAAGGAGGTGATCCTGGTTGATCAGAAAGGCCATCAACGAACAGCAATTGTTGGGCGTGTAAAGATAGAGACTAGACCGCTAATCCTTGTAGAGGCAAAGAGAGATTCGGATGATCAAACTTTCTACAGCATCCTTGTACAGAATGCGGAAACAGTTGCCTTGGTTTGTCCCTCCAAAGAACGCGAACTGCAAAAAACTGCAATCCCTGTGACTTCGCTTAAAGTTGGAGATGAAATTTTAGTTCGATTACAGGGAGGGGCTCGGCATACGGGAATTGAAATTCAAGAATTCATTGTGGAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DHQS

Protein Analysis

436

Amino Acids

47.72

Weight (kDa)

6.58

Isoelectric Point (pI)

43.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHQS	PF01959	85 - 237	9.9e-44	3-dehydroquinate synthase II N-terminal domain
DHQS_2nd	PF26558	252 - 435	3.1e-76	3-dehydroquinate synthase II C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28760 AT3G28760
fragaria_vesca	FvH4_6g49080 FvH4_6g49080
malus_domestica	MD09G1048800.v1.1
prunus_persica	Prupe.3G270100_v2.0.a1 Prupe.3G270100_v2.0.a1 Prupe.3G270100_v2.0.a1 Prupe.3G270100_v2.0.a1 Prupe.3G270100_v2.0.a1 Prupe.3G270100_v2.0.a1 Prupe.3G270100_v2.0.a1
pyrus_communis	pycom111g03960
rosa_chinensis	RchiOBHm_Chr2g0168871
rosa_laevigata	RLG00000021812
rosa_multiflora	Rmu_ssc0000393.1_g000009
rosa_roxburghii	Rroxscaffold_2G00082610
rosa_rugosa	Rorug02G0535900
rosa_samantha	Rh2AG606900 Rh2BG619700 Rh2CG588300 Rh2DG630300
rosa_wichuraiana	Rw2G050320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	227
Acc36I	ACCTGC	4 cut(s)	274, 523, 550, 989
AccII	CGCG	2 cut(s)	23, 1185
AciI	CCGC	9 cut(s)	198, 201, 204, 297, 606, 932, 966, 1079, 1148
AclWI	GGATC	2 cut(s)	798, 1006
AcoI	YGGCCR	2 cut(s)	99, 294
AcsI	RAATTY	4 cut(s)	505, 1236, 1281, 1289
AcyI	GRCGYC	1 cut(s)	224
AfaI	GTAC	2 cut(s)	242, 1140
AfeI	AGCGCT	1 cut(s)	495
AfiI	CCNNNNNNNGG	4 cut(s)	210, 360, 833, 1093
AgsI	TTSAA	6 cut(s)	482, 569, 674, 994, 1280, 1286
AjnI	CCWGG	2 cut(s)	961, 1014
AjuI	GAANNNNNNNTTGG	4 cut(s)	480, 512, 593, 625
AloI	GAACNNNNNNTCC	2 cut(s)	179, 211
AluBI	AGCT	5 cut(s)	475, 617, 686, 779, 978
AluI	AGCT	5 cut(s)	475, 617, 686, 779, 978
Alw26I	GTCTC	2 cut(s)	821, 1064
AlwI	GGATC	2 cut(s)	798, 1006
Ama87I	CYCGRG	2 cut(s)	638, 827
Aor51HI	AGCGCT	1 cut(s)	495
AoxI	GGCC	6 cut(s)	99, 294, 633, 824, 914, 1030
ApeKI	GCWGC	4 cut(s)	71, 82, 475, 560
ApoI	RAATTY	4 cut(s)	505, 1236, 1281, 1289
ArsI	GACNNNNNNTTYG	2 cut(s)	214, 246
Asp700I	GAANNNNTTC	1 cut(s)	320
AspLEI	GCGC	3 cut(s)	23, 25, 496
AspS9I	GGNCC	5 cut(s)	13, 363, 634, 825, 935
AsuC2I	CCSGG	2 cut(s)	828, 829
AsuHPI	GGTGA	2 cut(s)	431, 1021
AsuII	TTCGAA	1 cut(s)	599
AvaI	CYCGRG	2 cut(s)	638, 827
AvaII	GGWCC	3 cut(s)	13, 363, 935
BanII	GRGCYC	1 cut(s)	1264
BarI	GAAGNNNNNNTAC	2 cut(s)	672, 704
BbsI	GAAGAC	3 cut(s)	222, 319, 616
BbvI	GCAGC	4 cut(s)	58, 69, 462, 547
BccI	CCATC	3 cut(s)	61, 410, 1041
BceAI	ACGGC	5 cut(s)	259, 284, 309, 327, 740
BciT130I	CCWGG	2 cut(s)	963, 1016
BclI	TGATCA	2 cut(s)	1021, 1114
BcnI	CCSGG	2 cut(s)	828, 829
BcoDI	GTCTC	2 cut(s)	821, 1064
BfaI	CTAG	2 cut(s)	524, 1074
BfmI	CTRYAG	3 cut(s)	543, 811, 1126
BfoI	RGCGCY	1 cut(s)	497
BfuAI	ACCTGC	4 cut(s)	274, 523, 550, 989
BisI	GCNGC	7 cut(s)	72, 83, 201, 204, 297, 476, 561
BlsI	GCNGC	7 cut(s)	73, 84, 202, 205, 298, 477, 562
Bme1390I	CCNGG	4 cut(s)	828, 829, 963, 1016
Bme18I	GGWCC	3 cut(s)	13, 363, 935
BmeT110I	CYCGRG	2 cut(s)	638, 827
BmgT120I	GGNCC	5 cut(s)	13, 363, 634, 825, 935
BmiI	GGNNCC	2 cut(s)	850, 936
BmrFI	CCNGG	4 cut(s)	828, 829, 963, 1016
BmsI	GCATC	1 cut(s)	1140
BpiI	GAAGAC	3 cut(s)	222, 319, 616
BplI	GAGNNNNNCTC	2 cut(s)	350, 382
Bpu14I	TTCGAA	1 cut(s)	599
BpuEI	CTTGAG	2 cut(s)	467, 603
BpuMI	CCSGG	2 cut(s)	828, 829
BsaHI	GRCGYC	1 cut(s)	224
BsaJI	CCNNGG	6 cut(s)	16, 96, 462, 827, 828, 1161
BsaWI	WCCGGW	1 cut(s)	27
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	4 cut(s)	210, 360, 833, 1093
Bse3DI	GCAATG	1 cut(s)	903
BseBI	CCWGG	2 cut(s)	963, 1016
BseDI	CCNNGG	6 cut(s)	16, 96, 462, 827, 828, 1161
BseGI	GGATG	3 cut(s)	421, 1117, 1131
BseLI	CCNNNNNNNGG	4 cut(s)	210, 360, 833, 1093
BseMI	GCAATG	1 cut(s)	903
BseMII	CTCAG	1 cut(s)	999
BsePI	GCGCGC	1 cut(s)	21
BseX3I	CGGCCG	1 cut(s)	294
BseXI	GCAGC	4 cut(s)	58, 69, 462, 547
Bsh1236I	CGCG	2 cut(s)	23, 1185
Bsh1285I	CGRYCG	1 cut(s)	297
BshFI	GGCC	6 cut(s)	101, 296, 635, 826, 916, 1032
BsiEI	CGRYCG	1 cut(s)	297
BsiHKCI	CYCGRG	2 cut(s)	638, 827
BsiSI	CCGG	3 cut(s)	28, 102, 828
BsiWI	CGTACG	1 cut(s)	240
BslFI	GGGAC	3 cut(s)	250, 948, 1155
BslI	CCNNNNNNNGG	4 cut(s)	210, 360, 833, 1093
BsmAI	GTCTC	2 cut(s)	821, 1064
BsmFI	GGGAC	3 cut(s)	250, 948, 1155
BsmI	GAATGC	3 cut(s)	85, 934, 1150
BsnI	GGCC	6 cut(s)	101, 296, 635, 826, 916, 1032
BsoBI	CYCGRG	2 cut(s)	638, 827
Bsp119I	TTCGAA	1 cut(s)	599
Bsp1286I	GDGCHC	1 cut(s)	1264
Bsp1407I	TGTACA	1 cut(s)	1138
Bsp143I	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
BspACI	CCGC	9 cut(s)	198, 201, 204, 297, 606, 932, 966, 1079, 1148
BspANI	GGCC	6 cut(s)	101, 296, 635, 826, 916, 1032
BspCNI	CTCAG	1 cut(s)	998
BspFNI	CGCG	2 cut(s)	23, 1185
BspHI	TCATGA	2 cut(s)	288, 819
BspLI	GGNNCC	2 cut(s)	850, 936
BspMAI	CTGCAG	1 cut(s)	547
BspMI	ACCTGC	4 cut(s)	274, 523, 550, 989
BspPI	GGATC	2 cut(s)	798, 1006
BspQI	GCTCTTC	1 cut(s)	693
BspT104I	TTCGAA	1 cut(s)	599
BsrDI	GCAATG	1 cut(s)	903
BsrGI	TGTACA	1 cut(s)	1138
BssECI	CCNNGG	6 cut(s)	16, 96, 462, 827, 828, 1161
BssHII	GCGCGC	1 cut(s)	21
BssMI	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
BssNI	GRCGYC	1 cut(s)	224
BssT1I	CCWWGG	4 cut(s)	16, 96, 462, 1161
Bst2UI	CCWGG	2 cut(s)	963, 1016
Bst4CI	ACNGT	2 cut(s)	586, 1156
Bst6I	CTCTTC	6 cut(s)	196, 248, 393, 424, 693, 712
BstACI	GRCGYC	1 cut(s)	224
BstAUI	TGTACA	1 cut(s)	1138
BstBI	TTCGAA	1 cut(s)	599
BstC8I	GCNNGC	5 cut(s)	23, 281, 910, 914, 945
BstDEI	CTNAG	1 cut(s)	985
BstENI	CCTNNNNNAGG	1 cut(s)	1091
BstF5I	GGATG	3 cut(s)	421, 1117, 1131
BstFNI	CGCG	2 cut(s)	23, 1185
BstH2I	RGCGCY	1 cut(s)	497
BstHHI	GCGC	3 cut(s)	23, 25, 496
BstKTI	GATC	5 cut(s)	793, 808, 1014, 1024, 1117
BstMAI	GTCTC	2 cut(s)	821, 1064
BstMBI	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
BstMCI	CGRYCG	1 cut(s)	297
BstMWI	GCNNNNNNNGC	4 cut(s)	98, 529, 614, 953
BstNI	CCWGG	2 cut(s)	963, 1016
BstNSI	RCATGY	1 cut(s)	947
BstSCI	CCNGG	4 cut(s)	826, 827, 961, 1014
BstSFI	CTRYAG	3 cut(s)	543, 811, 1126
BstUI	CGCG	2 cut(s)	23, 1185
BstV1I	GCAGC	4 cut(s)	58, 69, 462, 547
BstV2I	GAAGAC	3 cut(s)	222, 319, 616
BstXI	CCANNNNNNTGG	2 cut(s)	469, 779
BstZI	CGGCCG	1 cut(s)	294
BsuRI	GGCC	6 cut(s)	101, 296, 635, 826, 916, 1032
BtgZI	GCGATG	1 cut(s)	144
BtsCI	GGATG	3 cut(s)	421, 1117, 1131
BtsIMutI	CAGTG	1 cut(s)	591
BveI	ACCTGC	4 cut(s)	274, 523, 550, 989
Cac8I	GCNNGC	5 cut(s)	23, 281, 910, 914, 945
CciI	TCATGA	2 cut(s)	288, 819
CfoI	GCGC	3 cut(s)	23, 25, 496
Cfr13I	GGNCC	5 cut(s)	13, 363, 634, 825, 935
Cfr9I	CCCGGG	1 cut(s)	827
Csp6I	GTAC	2 cut(s)	241, 1139
CspCI	CAANNNNNGTGG	2 cut(s)	427, 462
CviAII	CATG	4 cut(s)	289, 644, 820, 944
CviQI	GTAC	2 cut(s)	241, 1139
DdeI	CTNAG	1 cut(s)	985
DpnI	GATC	5 cut(s)	792, 807, 1013, 1023, 1116
DpnII	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
EaeI	YGGCCR	2 cut(s)	99, 294
EagI	CGGCCG	1 cut(s)	294
Eam1104I	CTCTTC	6 cut(s)	196, 248, 393, 424, 693, 712
EarI	CTCTTC	6 cut(s)	196, 248, 393, 424, 693, 712
EciI	GGCGGA	2 cut(s)	187, 981
EclXI	CGGCCG	1 cut(s)	294
Eco130I	CCWWGG	4 cut(s)	16, 96, 462, 1161
Eco147I	AGGCCT	1 cut(s)	916
Eco24I	GRGCYC	1 cut(s)	1264
Eco47I	GGWCC	3 cut(s)	13, 363, 935
Eco47III	AGCGCT	1 cut(s)	495
Eco52I	CGGCCG	1 cut(s)	294
Eco88I	CYCGRG	2 cut(s)	638, 827
EcoNI	CCTNNNNNAGG	1 cut(s)	1091
EcoO109I	RGGNCCY	3 cut(s)	13, 634, 935
EcoRI	GAATTC	1 cut(s)	1289
EcoRII	CCWGG	2 cut(s)	961, 1014
EcoT14I	CCWWGG	4 cut(s)	16, 96, 462, 1161
EcoT38I	GRGCYC	1 cut(s)	1264
ErhI	CCWWGG	4 cut(s)	16, 96, 462, 1161
FaeI	CATG	4 cut(s)	292, 647, 823, 947
FalI	AAGNNNNNCTT	4 cut(s)	825, 857, 901, 933
FaqI	GGGAC	3 cut(s)	250, 948, 1155
FatI	CATG	4 cut(s)	288, 643, 819, 943
FauI	CCCGC	1 cut(s)	925
FbaI	TGATCA	2 cut(s)	1021, 1114
Fnu4HI	GCNGC	7 cut(s)	72, 83, 201, 204, 297, 476, 561
FokI	GGATG	3 cut(s)	428, 1118, 1124
FriOI	GRGCYC	1 cut(s)	1264
Fsp4HI	GCNGC	7 cut(s)	72, 83, 201, 204, 297, 476, 561
FspBI	CTAG	2 cut(s)	524, 1074
GlaI	GCGC	3 cut(s)	22, 24, 495
GluI	GCNGC	7 cut(s)	72, 83, 201, 204, 297, 476, 561
HaeII	RGCGCY	1 cut(s)	497
HaeIII	GGCC	6 cut(s)	101, 296, 635, 826, 916, 1032
HapII	CCGG	3 cut(s)	28, 102, 828
HhaI	GCGC	3 cut(s)	23, 25, 496
Hin1I	GRCGYC	1 cut(s)	224
Hin1II	CATG	4 cut(s)	292, 647, 823, 947
Hin6I	GCGC	3 cut(s)	21, 23, 494
HinP1I	GCGC	3 cut(s)	21, 23, 494
HinfI	GANTC	6 cut(s)	45, 105, 248, 768, 893, 1106
HpaII	CCGG	3 cut(s)	28, 102, 828
HphI	GGTGA	2 cut(s)	431, 1021
Hpy166II	GTNNAC	2 cut(s)	270, 347
Hpy188I	TCNGA	4 cut(s)	883, 988, 1026, 1111
Hpy188III	TCNNGA	5 cut(s)	289, 304, 692, 820, 1286
Hpy8I	GTNNAC	2 cut(s)	270, 347
Hpy99I	CGWCG	3 cut(s)	226, 229, 305
HpyAV	CCTTC	3 cut(s)	124, 331, 827
HpyCH4III	ACNGT	2 cut(s)	586, 1156
HpyCH4IV	ACGT	2 cut(s)	224, 239
HpyF10VI	GCNNNNNNNGC	4 cut(s)	98, 529, 614, 953
HpyF3I	CTNAG	1 cut(s)	985
HpySE526I	ACGT	2 cut(s)	224, 239
Hsp92I	GRCGYC	1 cut(s)	224
Hsp92II	CATG	4 cut(s)	292, 647, 823, 947
HspAI	GCGC	3 cut(s)	21, 23, 494
Ksp22I	TGATCA	2 cut(s)	1021, 1114
Kzo9I	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
LguI	GCTCTTC	1 cut(s)	693
LmnI	GCTCC	4 cut(s)	116, 404, 472, 854
Lsp1109I	GCAGC	4 cut(s)	58, 69, 462, 547
LweI	GCATC	1 cut(s)	1140
MaeI	CTAG	2 cut(s)	524, 1074
MaeII	ACGT	2 cut(s)	224, 239
MaeIII	GTNAC	1 cut(s)	1210
MalI	GATC	5 cut(s)	792, 807, 1013, 1023, 1116
MboI	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
MfeI	CAATTG	2 cut(s)	369, 1047
MhlI	GDGCHC	1 cut(s)	1264
MlyI	GAGTC	3 cut(s)	39, 257, 777
MmeI	TCCRAC	2 cut(s)	450, 1207
MroXI	GAANNNNTTC	1 cut(s)	320
MseI	TTAA	2 cut(s)	665, 1221
MslI	CAYNNNNRTG	1 cut(s)	948
MspI	CCGG	3 cut(s)	28, 102, 828
MspR9I	CCNGG	4 cut(s)	828, 829, 963, 1016
MunI	CAATTG	2 cut(s)	369, 1047
Mva1269I	GAATGC	3 cut(s)	85, 934, 1150
MvaI	CCWGG	2 cut(s)	963, 1016
MvnI	CGCG	2 cut(s)	23, 1185
MwoI	GCNNNNNNNGC	4 cut(s)	98, 529, 614, 953
NciI	CCSGG	2 cut(s)	828, 829
NdeII	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
NlaIII	CATG	4 cut(s)	292, 647, 823, 947
NlaIV	GGNNCC	2 cut(s)	850, 936
NmeAIII	GCCGAG	1 cut(s)	1243
NmuCI	GTSAC	1 cut(s)	1210
NspI	RCATGY	1 cut(s)	947
NspV	TTCGAA	1 cut(s)	599
PaeI	GCATGC	1 cut(s)	947
PaeR7I	CTCGAG	1 cut(s)	638
PagI	TCATGA	2 cut(s)	288, 819
PauI	GCGCGC	1 cut(s)	21
PceI	AGGCCT	1 cut(s)	916
PciSI	GCTCTTC	1 cut(s)	693
PctI	GAATGC	3 cut(s)	85, 934, 1150
PdmI	GAANNNNTTC	1 cut(s)	320
PfeI	GAWTC	3 cut(s)	105, 893, 1106
Pfl23II	CGTACG	1 cut(s)	240
PflFI	GACNNNGTC	1 cut(s)	226
PkrI	GCNGC	7 cut(s)	73, 84, 202, 205, 298, 477, 562
PleI	GAGTC	3 cut(s)	39, 256, 776
PpsI	GAGTC	3 cut(s)	39, 256, 776
PpuMI	RGGWCCY	2 cut(s)	13, 935
Psp5II	RGGWCCY	2 cut(s)	13, 935
Psp6I	CCWGG	2 cut(s)	961, 1014
PspGI	CCWGG	2 cut(s)	961, 1014
PspLI	CGTACG	1 cut(s)	240
PspN4I	GGNNCC	2 cut(s)	850, 936
PspPI	GGNCC	5 cut(s)	13, 363, 634, 825, 935
PspPPI	RGGWCCY	2 cut(s)	13, 935
PspXI	VCTCGAGB	1 cut(s)	638
PstI	CTGCAG	1 cut(s)	547
PsyI	GACNNNGTC	1 cut(s)	226
PteI	GCGCGC	1 cut(s)	21
RsaI	GTAC	2 cut(s)	242, 1140
RsaNI	GTAC	2 cut(s)	241, 1139
RseI	CAYNNNNRTG	1 cut(s)	948
SapI	GCTCTTC	1 cut(s)	693
SaqAI	TTAA	2 cut(s)	665, 1221
SatI	GCNGC	7 cut(s)	72, 83, 201, 204, 297, 476, 561
Sau3AI	GATC	5 cut(s)	790, 805, 1011, 1021, 1114
Sau96I	GGNCC	5 cut(s)	13, 363, 634, 825, 935
SchI	GAGTC	3 cut(s)	39, 257, 777
ScrFI	CCNGG	4 cut(s)	828, 829, 963, 1016
SduI	GDGCHC	1 cut(s)	1264
SfaNI	GCATC	1 cut(s)	1140
SfcI	CTRYAG	3 cut(s)	543, 811, 1126
Sfr274I	CTCGAG	1 cut(s)	638
SfuI	TTCGAA	1 cut(s)	599
SinI	GGWCC	3 cut(s)	13, 363, 935
SlaI	CTCGAG	1 cut(s)	638
SmaI	CCCGGG	1 cut(s)	829
SmiMI	CAYNNNNRTG	1 cut(s)	948
SmlI	CTYRAG	3 cut(s)	446, 618, 638
SmoI	CTYRAG	3 cut(s)	446, 618, 638
SphI	GCATGC	1 cut(s)	947
SseBI	AGGCCT	1 cut(s)	916
SsiI	CCGC	9 cut(s)	198, 201, 204, 297, 606, 932, 966, 1079, 1148
SspMI	CTAG	2 cut(s)	524, 1074
StuI	AGGCCT	1 cut(s)	916
StyD4I	CCNGG	4 cut(s)	826, 827, 961, 1014
StyI	CCWWGG	4 cut(s)	16, 96, 462, 1161
TaaI	ACNGT	2 cut(s)	586, 1156
TaiI	ACGT	2 cut(s)	227, 242
TaqI	TCGA	9 cut(s)	251, 303, 396, 599, 639, 693, 766, 793, 1246
TatI	WGTACW	1 cut(s)	1138
TauI	GCSGC	3 cut(s)	203, 206, 299
TfiI	GAWTC	3 cut(s)	105, 893, 1106
Tru1I	TTAA	2 cut(s)	665, 1221
Tru9I	TTAA	2 cut(s)	665, 1221
TscAI	CASTG	1 cut(s)	591
TseFI	GTSAC	1 cut(s)	1210
TseI	GCWGC	4 cut(s)	71, 82, 475, 560
Tsp45I	GTSAC	1 cut(s)	1210
TspDTI	ATGAA	5 cut(s)	147, 738, 866, 1248, 1282
TspGWI	ACGGA	1 cut(s)	287
TspMI	CCCGGG	1 cut(s)	827
TspRI	CASTG	1 cut(s)	591
Tth111I	GACNNNGTC	1 cut(s)	226
VpaK11BI	GGWCC	3 cut(s)	13, 363, 935
XagI	CCTNNNNNAGG	1 cut(s)	1091
XapI	RAATTY	4 cut(s)	505, 1236, 1281, 1289
XceI	RCATGY	1 cut(s)	947
XhoI	CTCGAG	1 cut(s)	638
XmaI	CCCGGG	1 cut(s)	827
XmnI	GAANNNNTTC	1 cut(s)	320
XspI	CTAG	2 cut(s)	524, 1074
ZraI	GACGTC	1 cut(s)	225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.