MD09G1114300.v1.1

Clathrin coat assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0014561
Physical Location & Seq
Forward (+)
8715066 .. 8717387
2322 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1114300.v1.1.491

Sequence Viewer

Length: 2322 bp
ATGCCAAGCAAGCTAAAGAAGGCAATTGGAGCTGTGAAGGACCAAACGAGTATAAGCCTAGCCAAGGTCTCCAACAACAACAACTCGGCCAACCTCGAAGTCACAGTCCTCAAAGCCACGTCCCACGACGTCGTCCCCATCGTCGACAAATACATCCAAGAAATTCTCACGCTCATTACGTCCAACAAGTCGTACGCCTCCTCCTGCGCCCAAGCCATCGCCAAGCGCATCGGCAAAACCCGCAACTGGATCGTCGTGCTCAAATCCCTCATGCTCGTCCTCCGCATCTTCCAAGACGGCGACCCCTATTTTCCAATCGAAGTCCTCCACGCCATGAAGGGCGGCGCCAAAATCCTCAACCTATCCAACTTCCGCGACGATTCCAACTCCTGCCCGTGGGATTACACCGCCTTCGTCCGCACCTTCGCCCTCTACCTCGAAGAGCGACTGGACTGCTTCCTCACCGGGAAGCTCCAGCGGCGGTTCACCTACCAGCGCGACCAGGAATTCAACAACAACCGCAGAAGCTCCCGGTCCAACGGGCCCGTCATCCGCGACATGAAGCCCGCGATTCTGCTCGATCGGATACATTACTGGCAGAAACTGCTCGACAGAGCGATCGCCACGACGCCAACGGGGGCGGCCAAAACAAACCGTTTGGTATTGATCTCACTCTATTCGATCGTTCAAGAGACGTACGATCTGTACCGGGACATATCCGACGGTTTGGCTCTGCTTCTAGACAGCTTCTTCCAACTGCAATACCAGTCGTGCGTGAACGCTTTTCACGCCTGTGTGAAAGCCTCAAAACAATTTGAGGAGCTAGCGTCGTTCTACGCGCTCTGTAAGATCTTGGGGGTTGGGCGGACCTCCGAGTATCCGAGCGTGCAGAAAATTTCGGACGAGCTTCTGGAGACGTTACAGGAGTTTCTGAAGGATCAGGCTTCGTTTCCGGGTCGGTCGCCGCCAACCCATTTGCAGATTGGTTCGGATCAAATGGCGGGGAAGGAGGGTAAGAATAAAGGGTTGAGCTTTGAACCGAATGAAATCGCTTCTTCTGATCAATACGAGGGGTCAGATAGAGGCTCTGCTTTCGGTTCGGCTTGCACTTCGTTGGAGGATTTGACGAGTATCGCCGACCACAGTGGGAATGTGAGTCCGTCTTGGTCGGTGGAGCAAGAGTTTTATAATTCAGAGGAACAGCTGGATAAGACGCCGGAGAATGAATCCATCAGACGGGCGAGTGGGAATGGATCAACCCAATCATTGCCGGCTGAGGTCGATCAACCTCAACCGGCGAGTGTTGGGTTTGATCTTGTTTCTTTTGACGACTGGACACCACAACCAGATCAAACAAAGCAACAAGAAAAAGGAGTTGAACAACTATTTGGAGTCGAAAATCAAGAAGGTGCGAAACAAGGATGGGAGCTTGTGTTGTTCGAGTCTACAAACAAAGAACCGCCGCTGCAAAGATCATCGCCACCACCTTCATCTGTATATAATCTGTTTGATTCATCAAACCTTGACAGTTTGTTTCAGAAATCTTCAGTCCCACAACACCAATACAATCCATTTCTCGAAGATACAATTCCAATCGAGAGCTTTGCAGCCTCTTCGAGTTCAAAAACCACCACCAGCAATGGCTTTGGAAATTTCGGAGACGATTTGCTTTGGTCCCCTAGTACATCTCAACCAGCGGCACCAACATTTTGTGCACATAATTCAAATGTTGGACAAATGGCGCCAACATTTCCCACGCAGAATACAAACAATACAACAACAGTACCAACAGTTCCCGCCCACAATCCAAATAACACCACAATGACACCGCCACCATTTGGCGGGCCGAGCCCAAAAGGGGGCACAATTTCACCAACATTGTGGTCGCAACATTCCAATGAGAGCACGATGGCACCGACATTTTGCGCGCGGAGCACGAATGAGGCCACAACGGCGCCAACATTTTTCGCTCAAAGTCCGAAAGAGTTGGCAGTAGCAACATTCTGTGCCCAAAACTCCAACGAGAGTGGAATGGCACCGACATTCCGTGCGGTGGCTCGTGATAACAAGAGTGTAGCTCCGAGATTTCATGCAGACGAAGCTAATGAGTTCTCAGCTGCGCCGACATTCAGTGCGCAGAGTGAAAGCGATACGCAAGAAGGATGGGGTAACGTAGAAAACGACCCGTTTGCAGTGTTACCAAATGTAACAAGTAGTAGTGAACCTATGTGTAACGAATTGATGAACCAAGATAGTCTGTTGCATCAACAGAGACTGTGGTTGGAACAGCAAAACAAGATTATTGCTAAACATATGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

774

Amino Acids

85.23

Weight (kDa)

5.19

Isoelectric Point (pI)

55.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 32 - 313 4.3e-77 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014561)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05020
fragaria_vesca FvH4_6g42130 FvH4_6g42160 FvH4_6g42170
malus_domestica MD09G1114300.v1.1 MD17G1106000.v1.1
prunus_persica Prupe.3G210200_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0158041
rosa_laevigata RLG00000021052
rosa_multiflora Rmu_sc0000419.1_g000017
rosa_roxburghii Rroxscaffold_2G00091720
rosa_rugosa Rorug02G0465400
rosa_samantha Rh2AG531400 Rh2BG545900 Rh2CG515700 Rh2DG554000
rosa_wichuraiana Rw2G043950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1188
AatII GACGTC 1 cut(s) 132
Acc16I TGCGCA 1 cut(s) 2136
AccB1I GGYRCC 6 cut(s) 344, 1699, 1741, 1912, 1954, 2035
AccB7I CCANNNNNTGG 1 cut(s) 1838
AccI GTMKAC 2 cut(s) 144, 1445
AccII CGCG 7 cut(s) 375, 498, 555, 569, 839, 1928, 1930
AclWI GGATC 4 cut(s) 257, 945, 999, 1261
AcoI YGGCCR 2 cut(s) 87, 642
AcsI RAATTY 4 cut(s) 162, 506, 894, 1651
AcuI CTGAAG 2 cut(s) 953, 1530
AcyI GRCGYC 6 cut(s) 129, 345, 629, 1214, 1742, 1955
AfaI GTAC 5 cut(s) 194, 698, 707, 1684, 1785
AfiI CCNNNNNNNGG 9 cut(s) 64, 246, 396, 1236, 1838, 1841, 1858, 1859, 2053
AgsI TTSAA 6 cut(s) 511, 689, 1037, 1379, 1623, 1725
AjiI CACGTC 1 cut(s) 120
AjnI CCWGG 1 cut(s) 501
AjuI GAANNNNNNNTTGG 2 cut(s) 1371, 1403
AleI CACNNNNGTG 1 cut(s) 792
Alw21I GWGCWC 4 cut(s) 261, 1717, 1907, 1937
Alw26I GTCTC 5 cut(s) 73, 686, 908, 1653, 2266
Alw44I GTGCAC 1 cut(s) 1713
AlwI GGATC 4 cut(s) 257, 945, 999, 1261
AlwNI CAGNNNCTG 2 cut(s) 604, 2275
AoxI GGCC 5 cut(s) 87, 542, 642, 1844, 1944
ApaI GGGCCC 1 cut(s) 546
ApaLI GTGCAC 1 cut(s) 1713
ApeKI GCWGC 3 cut(s) 1465, 1607, 2117
ApoI RAATTY 4 cut(s) 162, 506, 894, 1651
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
AsiSI GCGATCGC 1 cut(s) 621
AspS9I GGNCC 7 cut(s) 40, 534, 542, 543, 867, 1674, 1844
AsuC2I CCSGG 4 cut(s) 466, 532, 710, 954
AsuHPI GGTGA 3 cut(s) 454, 478, 1863
AsuNHI GCTAGC 1 cut(s) 823
AvaII GGWCC 4 cut(s) 40, 534, 867, 1674
BaeGI GKGCMC 4 cut(s) 546, 1717, 1865, 2011
BaeI ACNNNNGTAYC 2 cut(s) 1767, 1800
BanI GGYRCC 6 cut(s) 344, 1699, 1741, 1912, 1954, 2035
BanII GRGCYC 2 cut(s) 546, 1853
BauI CACGAG 1 cut(s) 2058
Bbv12I GWGCWC 4 cut(s) 261, 1717, 1907, 1937
BbvCI CCTCAGC 1 cut(s) 1275
BbvI GCAGC 3 cut(s) 1452, 1619, 2104
BccI CCATC 6 cut(s) 146, 224, 1238, 1416, 1903, 2157
BceAI ACGGC 2 cut(s) 313, 1968
BciT130I CCWGG 1 cut(s) 503
BciVI GTATCC 2 cut(s) 579, 888
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 4 cut(s) 466, 532, 710, 954
BcoDI GTCTC 5 cut(s) 73, 686, 908, 1653, 2266
BfaI CTAG 4 cut(s) 59, 740, 824, 1680
BfoI RGCGCY 3 cut(s) 348, 1745, 1958
BfuI GTATCC 2 cut(s) 579, 888
BglI GCCNNNNNGGC 1 cut(s) 1952
BglII AGATCT 1 cut(s) 849
BisI GCNGC 9 cut(s) 343, 479, 642, 965, 1463, 1466, 1608, 1698, 2118
BlsI GCNGC 9 cut(s) 344, 480, 643, 966, 1464, 1467, 1609, 1699, 2119
Bme1390I CCNGG 5 cut(s) 466, 503, 532, 710, 954
Bme18I GGWCC 4 cut(s) 40, 534, 867, 1674
BmgBI CACGTC 1 cut(s) 120
BmgT120I GGNCC 7 cut(s) 40, 534, 542, 543, 867, 1674, 1844
BmiI GGNNCC 8 cut(s) 346, 544, 1676, 1701, 1743, 1914, 1956, 2037
BmrFI CCNGG 5 cut(s) 466, 503, 532, 710, 954
BmsI GCATC 3 cut(s) 237, 294, 2272
BmtI GCTAGC 1 cut(s) 827
BplI GAGNNNNNCTC 2 cut(s) 2062, 2094
BpmI CTGGAG 2 cut(s) 458, 932
Bpu10I CCTNAGC 1 cut(s) 1275
BpuMI CCSGG 4 cut(s) 466, 532, 710, 954
BsaHI GRCGYC 6 cut(s) 129, 345, 629, 1214, 1742, 1955
BsaI GGTCTC 1 cut(s) 73
BsaJI CCNNGG 2 cut(s) 63, 395
BsaXI ACNNNNNCTCC 8 cut(s) 185, 215, 812, 842, 1166, 1196, 1418, 1448
Bsc4I CCNNNNNNNGG 9 cut(s) 64, 246, 396, 1236, 1838, 1841, 1858, 1859, 2053
Bse118I RCCGGY 2 cut(s) 1270, 1294
Bse1I ACTGG 5 cut(s) 251, 453, 599, 766, 1337
Bse3DI GCAATG 2 cut(s) 1265, 1645
BseBI CCWGG 1 cut(s) 503
BseDI CCNNGG 2 cut(s) 63, 395
BseGI GGATG 4 cut(s) 153, 549, 1427, 2168
BseLI CCNNNNNNNGG 9 cut(s) 64, 246, 396, 1236, 1838, 1841, 1858, 1859, 2053
BseMI GCAATG 2 cut(s) 1265, 1645
BseMII CTCAG 2 cut(s) 1266, 2127
BseNI ACTGG 5 cut(s) 251, 453, 599, 766, 1337
BsePI GCGCGC 1 cut(s) 1926
BseRI GAGGAG 2 cut(s) 190, 833
BseSI GKGCMC 4 cut(s) 546, 1717, 1865, 2011
BseXI GCAGC 3 cut(s) 1452, 1619, 2104
BsgI GTGCAG 1 cut(s) 908
Bsh1236I CGCG 7 cut(s) 375, 498, 555, 569, 839, 1928, 1930
Bsh1285I CGRYCG 4 cut(s) 583, 621, 684, 962
BshFI GGCC 5 cut(s) 89, 544, 644, 1846, 1946
BshNI GGYRCC 6 cut(s) 344, 1699, 1741, 1912, 1954, 2035
BsiEI CGRYCG 4 cut(s) 583, 621, 684, 962
BsiHKAI GWGCWC 4 cut(s) 261, 1717, 1907, 1937
BsiSI CCGG 7 cut(s) 465, 532, 709, 953, 1217, 1271, 1295
BsiWI CGTACG 2 cut(s) 192, 696
BslFI GGGAC 5 cut(s) 106, 119, 725, 1535, 1660
BslI CCNNNNNNNGG 9 cut(s) 64, 246, 396, 1236, 1838, 1841, 1858, 1859, 2053
BsmAI GTCTC 5 cut(s) 73, 686, 908, 1653, 2266
BsmBI CGTCTC 3 cut(s) 686, 908, 1653
BsmFI GGGAC 5 cut(s) 106, 119, 725, 1535, 1660
BsnI GGCC 5 cut(s) 89, 544, 644, 1846, 1946
Bso31I GGTCTC 1 cut(s) 73
Bsp120I GGGCCC 1 cut(s) 542
Bsp1286I GDGCHC 8 cut(s) 261, 546, 1717, 1853, 1865, 1907, 1937, 2011
BspANI GGCC 5 cut(s) 89, 544, 644, 1846, 1946
BspCNI CTCAG 2 cut(s) 1267, 2126
BspFNI CGCG 7 cut(s) 375, 498, 555, 569, 839, 1928, 1930
BspLI GGNNCC 8 cut(s) 346, 544, 1676, 1701, 1743, 1914, 1956, 2037
BspOI GCTAGC 1 cut(s) 827
BspPI GGATC 4 cut(s) 257, 945, 999, 1261
BspQI GCTCTTC 1 cut(s) 435
BspT107I GGYRCC 6 cut(s) 344, 1699, 1741, 1912, 1954, 2035
BspTNI GGTCTC 1 cut(s) 73
BsrDI GCAATG 2 cut(s) 1265, 1645
BsrFI RCCGGY 2 cut(s) 1270, 1294
BsrI ACTGG 5 cut(s) 251, 453, 599, 766, 1337
BssAI RCCGGY 2 cut(s) 1270, 1294
BssECI CCNNGG 2 cut(s) 63, 395
BssHII GCGCGC 1 cut(s) 1926
BssNI GRCGYC 6 cut(s) 129, 345, 629, 1214, 1742, 1955
BssSI CACGAG 1 cut(s) 2058
BssT1I CCWWGG 1 cut(s) 63
Bst2BI CACGAG 1 cut(s) 2058
Bst2UI CCWGG 1 cut(s) 503
Bst4CI ACNGT 8 cut(s) 106, 656, 725, 1145, 1529, 1783, 1792, 2277
Bst6I CTCTTC 2 cut(s) 435, 1618
BstACI GRCGYC 6 cut(s) 129, 345, 629, 1214, 1742, 1955
BstAPI GCANNNNNTGC 1 cut(s) 604
BstC8I GCNNGC 8 cut(s) 11, 567, 825, 887, 1105, 1272, 1844, 1928
BstDEI CTNAG 2 cut(s) 1275, 2113
BstDSI CCRYGG 1 cut(s) 395
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 4 cut(s) 153, 549, 1427, 2168
BstFNI CGCG 7 cut(s) 375, 498, 555, 569, 839, 1928, 1930
BstH2I RGCGCY 3 cut(s) 348, 1745, 1958
BstMAI GTCTC 5 cut(s) 73, 686, 908, 1653, 2266
BstMCI CGRYCG 4 cut(s) 583, 621, 684, 962
BstNI CCWGG 1 cut(s) 503
BstSCI CCNGG 5 cut(s) 464, 501, 530, 708, 952
BstSLI GKGCMC 4 cut(s) 546, 1717, 1865, 2011
BstUI CGCG 7 cut(s) 375, 498, 555, 569, 839, 1928, 1930
BstV1I GCAGC 3 cut(s) 1452, 1619, 2104
BstX2I RGATCY 1 cut(s) 849
BstXI CCANNNNNNTGG 1 cut(s) 1881
BstYI RGATCY 1 cut(s) 849
BsuI GTATCC 2 cut(s) 579, 888
BsuRI GGCC 5 cut(s) 89, 544, 644, 1846, 1946
BtgI CCRYGG 1 cut(s) 395
BtgZI GCGATG 2 cut(s) 202, 1461
BtrI CACGTC 1 cut(s) 120
BtsCI GGATG 4 cut(s) 153, 549, 1427, 2168
BtsI GCAGTG 1 cut(s) 2199
BtsIMutI CAGTG 3 cut(s) 1150, 2137, 2199
Cac8I GCNNGC 8 cut(s) 11, 567, 825, 887, 1105, 1272, 1844, 1928
CaiI CAGNNNCTG 2 cut(s) 604, 2275
Cfr10I RCCGGY 2 cut(s) 1270, 1294
Cfr13I GGNCC 7 cut(s) 40, 534, 542, 543, 867, 1674, 1844
CseI GACGC 3 cut(s) 637, 816, 1222
Csp6I GTAC 5 cut(s) 193, 697, 706, 1683, 1784
CspCI CAANNNNNGTGG 2 cut(s) 2008, 2043
CviAII CATG 4 cut(s) 271, 334, 559, 2090
CviQI GTAC 5 cut(s) 193, 697, 706, 1683, 1784
DdeI CTNAG 2 cut(s) 1275, 2113
DinI GGCGCC 3 cut(s) 346, 1743, 1956
EaeI YGGCCR 2 cut(s) 87, 642
Eam1104I CTCTTC 2 cut(s) 435, 1618
EarI CTCTTC 2 cut(s) 435, 1618
EciI GGCGGA 1 cut(s) 880
Eco130I CCWWGG 1 cut(s) 63
Eco24I GRGCYC 2 cut(s) 546, 1853
Eco31I GGTCTC 1 cut(s) 73
Eco47I GGWCC 4 cut(s) 40, 534, 867, 1674
Eco57I CTGAAG 2 cut(s) 953, 1530
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoRI GAATTC 1 cut(s) 506
EcoRII CCWGG 1 cut(s) 501
EcoT14I CCWWGG 1 cut(s) 63
EcoT38I GRGCYC 2 cut(s) 546, 1853
EgeI GGCGCC 3 cut(s) 346, 1743, 1956
EheI GGCGCC 3 cut(s) 346, 1743, 1956
ErhI CCWWGG 1 cut(s) 63
Esp3I CGTCTC 3 cut(s) 686, 908, 1653
FaeI CATG 4 cut(s) 274, 337, 562, 2093
FaqI GGGAC 5 cut(s) 106, 119, 725, 1535, 1660
FatI CATG 4 cut(s) 270, 333, 558, 2089
FauI CCCGC 5 cut(s) 248, 574, 994, 1804, 1835
FauNDI CATATG 1 cut(s) 2313
FbaI TGATCA 1 cut(s) 1060
FblI GTMKAC 2 cut(s) 144, 1445
Fnu4HI GCNGC 9 cut(s) 343, 479, 642, 965, 1463, 1466, 1608, 1698, 2118
FokI GGATG 4 cut(s) 140, 536, 1434, 2175
FriOI GRGCYC 2 cut(s) 546, 1853
Fsp4HI GCNGC 9 cut(s) 343, 479, 642, 965, 1463, 1466, 1608, 1698, 2118
FspBI CTAG 4 cut(s) 59, 740, 824, 1680
FspI TGCGCA 1 cut(s) 2136
GluI GCNGC 9 cut(s) 343, 479, 642, 965, 1463, 1466, 1608, 1698, 2118
GsuI CTGGAG 2 cut(s) 458, 932
HaeII RGCGCY 3 cut(s) 348, 1745, 1958
HaeIII GGCC 5 cut(s) 89, 544, 644, 1846, 1946
HapII CCGG 7 cut(s) 465, 532, 709, 953, 1217, 1271, 1295
HgaI GACGC 3 cut(s) 637, 816, 1222
Hin1I GRCGYC 6 cut(s) 129, 345, 629, 1214, 1742, 1955
Hin1II CATG 4 cut(s) 274, 337, 562, 2093
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HinfI GANTC 7 cut(s) 380, 571, 1156, 1226, 1392, 1442, 1511
HpaII CCGG 7 cut(s) 465, 532, 709, 953, 1217, 1271, 1295
HphI GGTGA 3 cut(s) 454, 478, 1863
Hpy166II GTNNAC 6 cut(s) 145, 486, 778, 1446, 1715, 2222
Hpy188III TCNNGA 8 cut(s) 689, 740, 911, 1403, 1577, 1597, 2060, 2319
Hpy8I GTNNAC 6 cut(s) 145, 486, 778, 1446, 1715, 2222
Hpy99I CGWCG 8 cut(s) 131, 134, 146, 257, 380, 631, 725, 832
HpyCH4III ACNGT 8 cut(s) 106, 656, 725, 1145, 1529, 1783, 1792, 2277
HpyCH4IV ACGT 6 cut(s) 119, 129, 179, 695, 917, 2172
HpyF3I CTNAG 2 cut(s) 1275, 2113
HpySE526I ACGT 6 cut(s) 119, 129, 179, 695, 917, 2172
Hsp92I GRCGYC 6 cut(s) 129, 345, 629, 1214, 1742, 1955
Hsp92II CATG 4 cut(s) 274, 337, 562, 2093
KasI GGCGCC 3 cut(s) 344, 1741, 1954
KroI GCCGGC 1 cut(s) 1270
KroNI GCCGGC 1 cut(s) 1272
Ksp22I TGATCA 1 cut(s) 1060
LguI GCTCTTC 1 cut(s) 435
LmnI GCTCC 8 cut(s) 29, 477, 533, 820, 1174, 1426, 1932, 2083
Lsp1109I GCAGC 3 cut(s) 1452, 1619, 2104
LweI GCATC 3 cut(s) 237, 294, 2272
MaeI CTAG 4 cut(s) 59, 740, 824, 1680
MaeII ACGT 6 cut(s) 119, 129, 179, 695, 917, 2172
MaeIII GTNAC 6 cut(s) 100, 918, 2168, 2196, 2206, 2231
MboII GAAGA 7 cut(s) 280, 452, 742, 1047, 1536, 1592, 1605
MfeI CAATTG 1 cut(s) 24
MflI RGATCY 1 cut(s) 849
MhlI GDGCHC 8 cut(s) 261, 546, 1717, 1853, 1865, 1907, 1937, 2011
Mly113I GGCGCC 3 cut(s) 345, 1742, 1955
MlyI GAGTC 3 cut(s) 1165, 1401, 1451
MroNI GCCGGC 1 cut(s) 1270
MslI CAYNNNNRTG 3 cut(s) 792, 1820, 1896
MspA1I CMGCKG 5 cut(s) 478, 1204, 1465, 1697, 2117
MspI CCGG 7 cut(s) 465, 532, 709, 953, 1217, 1271, 1295
MspR9I CCNGG 5 cut(s) 466, 503, 532, 710, 954
MunI CAATTG 1 cut(s) 24
MvaI CCWGG 1 cut(s) 503
MvnI CGCG 7 cut(s) 375, 498, 555, 569, 839, 1928, 1930
NaeI GCCGGC 1 cut(s) 1272
NarI GGCGCC 3 cut(s) 345, 1742, 1955
NciI CCSGG 4 cut(s) 466, 532, 710, 954
NdeI CATATG 1 cut(s) 2313
NgoMIV GCCGGC 1 cut(s) 1270
NheI GCTAGC 1 cut(s) 823
NlaIII CATG 4 cut(s) 274, 337, 562, 2093
NlaIV GGNNCC 8 cut(s) 346, 544, 1676, 1701, 1743, 1914, 1956, 2037
NmeAIII GCCGAG 2 cut(s) 65, 1872
NmuCI GTSAC 1 cut(s) 100
NsbI TGCGCA 1 cut(s) 2136
OliI CACNNNNGTG 1 cut(s) 792
PauI GCGCGC 1 cut(s) 1926
PciSI GCTCTTC 1 cut(s) 435
PcsI WCGNNNNNNNCGW 4 cut(s) 138, 176, 1913, 2178
PdiI GCCGGC 1 cut(s) 1272
PfeI GAWTC 4 cut(s) 380, 571, 1226, 1511
Pfl23II CGTACG 2 cut(s) 192, 696
PflFI GACNNNGTC 1 cut(s) 131
PflMI CCANNNNNTGG 1 cut(s) 1838
PkrI GCNGC 9 cut(s) 344, 480, 643, 966, 1464, 1467, 1609, 1699, 2119
Ple19I CGATCG 3 cut(s) 583, 621, 684
PleI GAGTC 3 cut(s) 1164, 1400, 1450
PluTI GGCGCC 3 cut(s) 348, 1745, 1958
PpsI GAGTC 3 cut(s) 1164, 1400, 1450
PsiI TTATAA 1 cut(s) 1188
Psp6I CCWGG 1 cut(s) 501
PspGI CCWGG 1 cut(s) 501
PspLI CGTACG 2 cut(s) 192, 696
PspN4I GGNNCC 8 cut(s) 346, 544, 1676, 1701, 1743, 1914, 1956, 2037
PspOMI GGGCCC 1 cut(s) 542
PspPI GGNCC 7 cut(s) 40, 534, 542, 543, 867, 1674, 1844
PsrI GAACNNNNNNTAC 2 cut(s) 1776, 1808
PstNI CAGNNNCTG 2 cut(s) 604, 2275
PsuI RGATCY 1 cut(s) 849
PsyI GACNNNGTC 1 cut(s) 131
PteI GCGCGC 1 cut(s) 1926
PvuI CGATCG 3 cut(s) 583, 621, 684
PvuII CAGCTG 2 cut(s) 1204, 2117
RgaI GCGATCGC 1 cut(s) 621
RsaI GTAC 5 cut(s) 194, 698, 707, 1684, 1785
RsaNI GTAC 5 cut(s) 193, 697, 706, 1683, 1784
RseI CAYNNNNRTG 3 cut(s) 792, 1820, 1896
SalI GTCGAC 1 cut(s) 143
SapI GCTCTTC 1 cut(s) 435
SatI GCNGC 9 cut(s) 343, 479, 642, 965, 1463, 1466, 1608, 1698, 2118
Sau96I GGNCC 7 cut(s) 40, 534, 542, 543, 867, 1674, 1844
SchI GAGTC 3 cut(s) 1165, 1401, 1451
ScrFI CCNGG 5 cut(s) 466, 503, 532, 710, 954
SduI GDGCHC 8 cut(s) 261, 546, 1717, 1853, 1865, 1907, 1937, 2011
SfaAI GCGATCGC 1 cut(s) 621
SfaNI GCATC 3 cut(s) 237, 294, 2272
SfoI GGCGCC 3 cut(s) 346, 1743, 1956
SgfI GCGATCGC 1 cut(s) 621
SinI GGWCC 4 cut(s) 40, 534, 867, 1674
SmiMI CAYNNNNRTG 3 cut(s) 792, 1820, 1896
SspDI GGCGCC 3 cut(s) 344, 1741, 1954
SspMI CTAG 4 cut(s) 59, 740, 824, 1680
StyD4I CCNGG 5 cut(s) 464, 501, 530, 708, 952
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 8 cut(s) 106, 656, 725, 1145, 1529, 1783, 1792, 2277
TaiI ACGT 6 cut(s) 122, 132, 182, 698, 920, 2175
TaqII GACCGA 1 cut(s) 948
TatI WGTACW 1 cut(s) 1682
TauI GCSGC 6 cut(s) 345, 481, 644, 967, 1465, 1700
TfiI GAWTC 4 cut(s) 380, 571, 1226, 1511
TscAI CASTG 3 cut(s) 1150, 2137, 2199
TseFI GTSAC 1 cut(s) 100
TseI GCWGC 3 cut(s) 1465, 1607, 2117
Tsp45I GTSAC 1 cut(s) 100
TspDTI ATGAA 8 cut(s) 350, 575, 1059, 1239, 1479, 1503, 2078, 2258
TspGWI ACGGA 2 cut(s) 1149, 2036
TspRI CASTG 3 cut(s) 1150, 2137, 2199
Tth111I GACNNNGTC 1 cut(s) 131
Van91I CCANNNNNTGG 1 cut(s) 1838
VneI GTGCAC 1 cut(s) 1713
VpaK11BI GGWCC 4 cut(s) 40, 534, 867, 1674
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 4 cut(s) 162, 506, 894, 1651
XbaI TCTAGA 1 cut(s) 739
XcmI CCANNNNNNNNNTGG 1 cut(s) 980
XmiI GTMKAC 2 cut(s) 144, 1445
XspI CTAG 4 cut(s) 59, 740, 824, 1680
ZraI GACGTC 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.