Prupe.3G210200_v2.0.a1

Clathrin coat assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0014561
Physical Location & Seq
Reverse (-)
21567893 .. 21571148
3256 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G210200.1

Sequence Viewer

Length: 2775 bp
ATGACTTGGTCAATTAAACAAGTGCGAGTCTCAGTCACGTCCACAAACAATAAGAGAGTCTCAAGGCCTTTCCCTCCTCTCCTTTCCTCTCCTCTCTTCTCCACCACCCAAAATAATTCCAAACCTCACCACCCTTCTCATTCCTCCTCTCAAAACCAAAAACTCGTTCCACTAATCAAAATTAGAATCCCAAAAATTCCCACAAAAAACCTCCTCTTCTCCACCAAAAACACATTGAAAAAACAAAAATTAATTCATGATCCAAAATTATTAACAATGCCAAGCAAGCTGAAGAAGGCAATTGGGGCAGTGAAAGACCAAACGAGCATAAGCCTTGCCAAGGTCTCCAACACCAACTCCGCCAACCTCGAGGTCACCGTCCTCAAAGCCACCTCCCACGACGTCGTTCCCATCGAAGACAAGTACGTCCAGGAAATTCTCACGCTCATTTCGTCGAACAAGTCGTACGCATCCTCCTGCGCCCAGGCCATCGCCAGGCGCATCGGCAAAACCCGTGACTGGATCGTCGCCCTCAAATCCCTCATGCTCGTCCTCCGCATCTTCCAGGATGGGGACCCCTATTTCCCCATCGAGGTCCTCCACGCCATGAAGCGCGGCGCCAAGATCCTCAACCTCTCCAACTTCCGCGACGACTCCAACTCCTGCCCCTGGGACTTCACCGCCTTCGTCCGCACCTTCGCGCTCTACCTCGACGAGCGCCTCGATTGCTTCCTCACCGGGAAGCTCCAGCGGCGCTTCACGTACCAGCGCGACCAAGAATACAACAGCAGCCGGAGGAGCCGCCGGTCGAACGACCCCGTGGCGGTGGTTCGCGACATGAAGCCGGCGATGCTGCTGGACCGGATTCACTACTGGCAAAAGCTGCTGGACCGGGCGATGGCGACCACGCCAACCGGCGCCGCCAGGACGAACCGGTTAGTTCTGATTTCGCTCTACGCGATCGTTCAGGAGACATACGATCTATACCGGGACATTTCGGACGGGCTGGCTCTGCTTCTGGATAGCTTTTTTCAATTGCAGTATCAATCTTGCGTGAACGCGTTTCATGCCTGCGTGAAAGCCTCGAAGCAATTCGAGGAGCTGTCGGCGTTTTACGGGACGTGCAAGAGCTTGGGTGTTGGTCGGACCTCTGAGTATCCTAGCGTGCAGAAGATCTCCGAAGAGCTTTTGGAGACGTTGCAGGAGTTTTTGAAGGACCAAGCTTCATTTCCGAGTCGGTCGCCGCCGACCCATTTAACGGCCAAGGGTAGTAAGAATAAAGGGTTGAGCTTGGAACAGAGTGAATTTCCATCTTCGGAGCAATTCGAAACGGCGTCGGAGAAAGGTTCTGCGTTTAGTTCGGCCTGCACGTCGTTGGAGGATTTGATGAGCGTTTGTGATCAGAATGGCAATGTGAGCCCGTCGTGGTCGGTGGAGCAAGAGTTTTATAACTCAGAGGAGCAACCAGAGAAGCCGGCAGAGGATGGGCTCGCCAGACGAACAAATGAGAATGGATCGAACCAATCTTCGCCGGAAAGTTTCAATCATGTTTCCTTTGATGGCTTCCCACCGCAATCTCAACCTCAACCACAACCGCAACCGGATCAGATAAAGCAAGAAGAACTAGTAGGAGTTGATGATCAAGAGGGTGCAAAACAGGGCTGGGAGCTTGTTCTGTTTGAGTCTGCAAATAATCAAACACCATTGCAAACATCATCACCAAATCTACCCATTGATTCATCAAACTTGGACAGCTTGTTTCAAAACTCCTCAGTGCCCCAACACAATTACAATCCATTTCTTGATGACCCAGTACCATTTGATAGCTTTGCAGCCTCTTCGAATCCAAGCGCCACCGCCAGCAATGGCTTTGGAAATCTCGGAGAAGACGACCTGTTTTCGTTCCCTTCCACAATGCTGGTAGTGGCACCAACATTTCCCGGACAGAATTTAAAAGAGACAACAACATTTGGCGCCAATAATTCAAATGAGAGCGCAGATGTTACACCATTTCCCGCGCAGAGTTCAAATAATTCAACAATGGCACTAACATTTCTTGCCCAAAGTCCAAAAGAGAGCGAAATGTCACCAAGTCTCTGGCCACGGCGTGCAAATGAAAGCACAACAATGGCAACAGCATTTTGTGCACAGAGCCAGAGAGAGATGACAATAGCACCAACATTTTGTGTACGGAGCACAAATGAGGTTGGTGAACAAAGTCCAAAAGAGAATACAATATTAATGCCACCACCAACATTTCACGCACGGGATACGAATGGCAGCGCAATATCACCAACTTTCTGCGCCCAAAATCCCCAAGAGAGCAGAATGCCACCAAACTTTAACGAGAGTGTGGTGCCAACATTTCGTGCACAGAATCGCAATGACAAGACCATGGCGCCAACCTTTACCGCGGTGGCTCGCGATAATGAGAGCGTGGTGCCAACATATGGTGTACATAATCGTAGTGATACGGCCATGGCGCCAACATTTGGTGCACATAATCGTAGTGACACGGCCATGGCGCCAACCTTTCAGGCAGATGAGCCTAACGAGTTCATTGCTGCACCGACTTTCTTTGCAAGAAGTGAAATGAAGACAAGAGGAGCATTGCCTAACGTAGAAAACAACGACCCGTTTGCGACGTTCTTCTCTAAAGTGACAACTCCTAGTGAACCTGTGTGTAATGGATTAGTGAATCAAGAAAGCCTCTTGCATCAACAGAGATTGTGGTTGGAACAGCAAAACAAGATTATTGCAAAGCATATGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

925

Amino Acids

102.71

Weight (kDa)

6.21

Isoelectric Point (pI)

62.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014561)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05020
fragaria_vesca FvH4_6g42130 FvH4_6g42160 FvH4_6g42170
malus_domestica MD09G1114300.v1.1 MD17G1106000.v1.1
prunus_persica Prupe.3G210200_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0158041
rosa_laevigata RLG00000021052
rosa_multiflora Rmu_sc0000419.1_g000017
rosa_roxburghii Rroxscaffold_2G00091720
rosa_rugosa Rorug02G0465400
rosa_samantha Rh2AG531400 Rh2BG545900 Rh2CG515700 Rh2DG554000
rosa_wichuraiana Rw2G043950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1449
AasI GACNNNNNNGTC 2 cut(s) 425, 524
AatII GACGTC 1 cut(s) 405
AbsI CCTCGAGG 1 cut(s) 368
AccB1I GGYRCC 9 cut(s) 617, 917, 1927, 1973, 2356, 2398, 2440, 2482, 2524
AccB7I CCANNNNNTGG 2 cut(s) 2450, 2492
AclWI GGATC 5 cut(s) 254, 530, 619, 1522, 1611
AcoI YGGCCR 4 cut(s) 1260, 2099, 2475, 2517
AcsI RAATTY 4 cut(s) 195, 435, 1304, 1948
AcuI CTGAAG 1 cut(s) 311
AcyI GRCGYC 8 cut(s) 402, 618, 918, 1334, 1974, 2399, 2483, 2525
AdeI CACNNNGTG 1 cut(s) 2108
AfaI GTAC 6 cut(s) 425, 467, 764, 1815, 2190, 2457
AflIII ACRYGT 1 cut(s) 1059
AgeI ACCGGT 1 cut(s) 933
AgsI TTSAA 8 cut(s) 238, 1034, 1213, 1543, 1763, 1986, 2028, 2037
AhlI ACTAGT 1 cut(s) 1624
AjiI CACGTC 3 cut(s) 39, 1122, 1371
AjnI CCWGG 6 cut(s) 429, 483, 494, 564, 668, 923
AjuI GAANNNNNNNTTGG 4 cut(s) 150, 182, 1212, 1244
Alw21I GWGCWC 4 cut(s) 2149, 2198, 2374, 2500
Alw26I GTCTC 7 cut(s) 34, 64, 349, 965, 1187, 1952, 2099
Alw44I GTGCAC 3 cut(s) 2145, 2370, 2496
AlwI GGATC 5 cut(s) 254, 530, 619, 1522, 1611
Ama87I CYCGRG 1 cut(s) 368
AoxI GGCC 7 cut(s) 65, 486, 1260, 1362, 2099, 2475, 2517
ApaLI GTGCAC 3 cut(s) 2145, 2370, 2496
ApeKI GCWGC 6 cut(s) 789, 853, 883, 1832, 2280, 2564
ApoI RAATTY 4 cut(s) 195, 435, 1304, 1948
AseI ATTAAT 2 cut(s) 251, 2240
AsiGI ACCGGT 1 cut(s) 933
Asp700I GAANNNNTTC 1 cut(s) 1091
AspS9I GGNCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
AsuC2I CCSGG 4 cut(s) 739, 893, 989, 1941
AsuHPI GGTGA 8 cut(s) 119, 367, 670, 727, 1710, 2079, 2222, 2283
AsuII TTCGAA 2 cut(s) 1326, 1841
AvaI CYCGRG 1 cut(s) 368
AvaII GGWCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
BaeGI GKGCMC 4 cut(s) 1779, 2149, 2374, 2500
BalI TGGCCA 1 cut(s) 2101
BanI GGYRCC 9 cut(s) 617, 917, 1927, 1973, 2356, 2398, 2440, 2482, 2524
BanII GRGCYC 2 cut(s) 1421, 1491
BbsI GAAGAC 3 cut(s) 423, 1893, 2603
Bbv12I GWGCWC 4 cut(s) 2149, 2198, 2374, 2500
BbvI GCAGC 6 cut(s) 801, 840, 870, 1844, 2292, 2551
BccI CCATC 8 cut(s) 419, 497, 563, 596, 892, 1318, 1478, 1553
BceAI ACGGC 5 cut(s) 1275, 1347, 2120, 2490, 2532
BcgI CGANNNNNNTGC 6 cut(s) 1821, 1855, 2543, 2577, 2621, 2655
BciT130I CCWGG 6 cut(s) 431, 485, 496, 566, 670, 925
BciVI GTATCC 2 cut(s) 1167, 2263
BclI TGATCA 2 cut(s) 1399, 1639
BcnI CCSGG 4 cut(s) 739, 893, 989, 1941
BcoDI GTCTC 7 cut(s) 34, 64, 349, 965, 1187, 1952, 2099
BcuI ACTAGT 1 cut(s) 1624
BfaI CTAG 3 cut(s) 1161, 1625, 2670
BfoI RGCGCY 9 cut(s) 621, 721, 757, 921, 1854, 1977, 2402, 2486, 2528
BfuI GTATCC 2 cut(s) 1167, 2263
BglII AGATCT 1 cut(s) 1173
Bme18I GGWCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
BmeT110I CYCGRG 1 cut(s) 368
BmgBI CACGTC 3 cut(s) 39, 1122, 1371
BmgT120I GGNCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
BmrI ACTGGG 1 cut(s) 1805
BmsI GCATC 5 cut(s) 479, 510, 567, 840, 2725
BmuI ACTGGG 1 cut(s) 1805
BpiI GAAGAC 3 cut(s) 423, 1893, 2603
BpmI CTGGAG 1 cut(s) 731
Bpu14I TTCGAA 2 cut(s) 1326, 1841
BpuEI CTTGAG 1 cut(s) 46
BpuMI CCSGG 4 cut(s) 739, 893, 989, 1941
BsaAI YACGTR 1 cut(s) 762
BsaHI GRCGYC 8 cut(s) 402, 618, 918, 1334, 1974, 2399, 2483, 2525
BsaI GGTCTC 1 cut(s) 349
BsaWI WCCGGW 3 cut(s) 861, 933, 1600
BsaXI ACNNNNNCTCC 8 cut(s) 341, 371, 458, 488, 644, 674, 1427, 1457
Bse118I RCCGGY 5 cut(s) 804, 844, 914, 933, 1474
Bse1I ACTGG 3 cut(s) 524, 878, 1811
Bse3DI GCAATG 6 cut(s) 1417, 1703, 1870, 2389, 2559, 2609
BseBI CCWGG 6 cut(s) 431, 485, 496, 566, 670, 925
BseGI GGATG 3 cut(s) 470, 574, 1489
BseMI GCAATG 6 cut(s) 1417, 1703, 1870, 2389, 2559, 2609
BseMII CTCAG 4 cut(s) 45, 1143, 1467, 1785
BseNI ACTGG 3 cut(s) 524, 878, 1811
BseRI GAGGAG 9 cut(s) 66, 81, 136, 203, 811, 1112, 1472, 1759, 2619
BseSI GKGCMC 4 cut(s) 1779, 2149, 2374, 2500
BseXI GCAGC 6 cut(s) 801, 840, 870, 1844, 2292, 2551
BseYI CCCAGC 1 cut(s) 1662
BsgI GTGCAG 3 cut(s) 1187, 1351, 2550
Bsh1285I CGRYCG 3 cut(s) 809, 963, 1241
BshFI GGCC 7 cut(s) 67, 488, 1262, 1364, 2101, 2477, 2519
BshNI GGYRCC 9 cut(s) 617, 917, 1927, 1973, 2356, 2398, 2440, 2482, 2524
BshTI ACCGGT 1 cut(s) 933
BsiEI CGRYCG 3 cut(s) 809, 963, 1241
BsiHKAI GWGCWC 4 cut(s) 2149, 2198, 2374, 2500
BsiHKCI CYCGRG 1 cut(s) 368
BsiWI CGTACG 1 cut(s) 465
BslFI GGGAC 4 cut(s) 587, 686, 1004, 1132
BsmAI GTCTC 7 cut(s) 34, 64, 349, 965, 1187, 1952, 2099
BsmBI CGTCTC 1 cut(s) 1187
BsmFI GGGAC 4 cut(s) 587, 686, 1004, 1132
BsmI GAATGC 1 cut(s) 2334
BsnI GGCC 7 cut(s) 67, 488, 1262, 1364, 2101, 2477, 2519
Bso31I GGTCTC 1 cut(s) 349
BsoBI CYCGRG 1 cut(s) 368
Bsp119I TTCGAA 2 cut(s) 1326, 1841
Bsp1286I GDGCHC 7 cut(s) 1421, 1491, 1779, 2149, 2198, 2374, 2500
Bsp1407I TGTACA 1 cut(s) 2455
Bsp19I CCATGG 3 cut(s) 2394, 2478, 2520
Bsp68I TCGCGA 2 cut(s) 834, 2424
BspANI GGCC 7 cut(s) 67, 488, 1262, 1364, 2101, 2477, 2519
BspCNI CTCAG 4 cut(s) 44, 1144, 1466, 1784
BspHI TCATGA 1 cut(s) 256
BspPI GGATC 5 cut(s) 254, 530, 619, 1522, 1611
BspQI GCTCTTC 1 cut(s) 1176
BspT104I TTCGAA 2 cut(s) 1326, 1841
BspT107I GGYRCC 9 cut(s) 617, 917, 1927, 1973, 2356, 2398, 2440, 2482, 2524
BspTNI GGTCTC 1 cut(s) 349
BsrDI GCAATG 6 cut(s) 1417, 1703, 1870, 2389, 2559, 2609
BsrFI RCCGGY 5 cut(s) 804, 844, 914, 933, 1474
BsrGI TGTACA 1 cut(s) 2455
BsrI ACTGG 3 cut(s) 524, 878, 1811
BssAI RCCGGY 5 cut(s) 804, 844, 914, 933, 1474
BssNI GRCGYC 8 cut(s) 402, 618, 918, 1334, 1974, 2399, 2483, 2525
BssT1I CCWWGG 5 cut(s) 339, 1263, 2394, 2478, 2520
Bst2UI CCWGG 6 cut(s) 431, 485, 496, 566, 670, 925
Bst4CI ACNGT 1 cut(s) 379
Bst6I CTCTTC 4 cut(s) 101, 221, 1176, 1843
BstACI GRCGYC 8 cut(s) 402, 618, 918, 1334, 1974, 2399, 2483, 2525
BstAPI GCANNNNNTGC 2 cut(s) 883, 2144
BstAUI TGTACA 1 cut(s) 2455
BstBAI YACGTR 1 cut(s) 762
BstBI TTCGAA 2 cut(s) 1326, 1841
BstDEI CTNAG 4 cut(s) 31, 1152, 1453, 1771
BstDSI CCRYGG 6 cut(s) 819, 2102, 2394, 2412, 2478, 2520
BstEII GGTNACC 1 cut(s) 373
BstENI CCTNNNNNAGG 1 cut(s) 338
BstF5I GGATG 3 cut(s) 470, 574, 1489
BstH2I RGCGCY 9 cut(s) 621, 721, 757, 921, 1854, 1977, 2402, 2486, 2528
BstMAI GTCTC 7 cut(s) 34, 64, 349, 965, 1187, 1952, 2099
BstMCI CGRYCG 3 cut(s) 809, 963, 1241
BstNI CCWGG 6 cut(s) 431, 485, 496, 566, 670, 925
BstPI GGTNACC 1 cut(s) 373
BstSLI GKGCMC 4 cut(s) 1779, 2149, 2374, 2500
BstV1I GCAGC 6 cut(s) 801, 840, 870, 1844, 2292, 2551
BstV2I GAAGAC 3 cut(s) 423, 1893, 2603
BstX2I RGATCY 2 cut(s) 624, 1173
BstXI CCANNNNNNTGG 2 cut(s) 1918, 2097
BstYI RGATCY 2 cut(s) 624, 1173
BsuI GTATCC 2 cut(s) 1167, 2263
BsuRI GGCC 7 cut(s) 67, 488, 1262, 1364, 2101, 2477, 2519
BtgI CCRYGG 6 cut(s) 819, 2102, 2394, 2412, 2478, 2520
BtgZI GCGATG 3 cut(s) 475, 863, 911
BtrI CACGTC 3 cut(s) 39, 1122, 1371
BtsCI GGATG 3 cut(s) 470, 574, 1489
BtsI GCAGTG 1 cut(s) 315
BtsIMutI CAGTG 2 cut(s) 315, 1779
BtuMI TCGCGA 2 cut(s) 834, 2424
CciI TCATGA 1 cut(s) 256
Cfr10I RCCGGY 5 cut(s) 804, 844, 914, 933, 1474
Cfr13I GGNCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
Cfr42I CCGCGG 1 cut(s) 2415
CseI GACGC 1 cut(s) 1323
Csp6I GTAC 6 cut(s) 424, 466, 763, 1814, 2189, 2456
CspAI ACCGGT 1 cut(s) 933
CviAII CATG 9 cut(s) 257, 544, 607, 838, 1067, 1547, 2395, 2479, 2521
CviQI GTAC 6 cut(s) 424, 466, 763, 1814, 2189, 2456
DdeI CTNAG 4 cut(s) 31, 1152, 1453, 1771
DinI GGCGCC 6 cut(s) 619, 919, 1975, 2400, 2484, 2526
DraI TTTAAA 1 cut(s) 1953
DraIII CACNNNGTG 1 cut(s) 2108
DrdI GACNNNNNNGTC 2 cut(s) 425, 524
DseDI GACNNNNNNGTC 2 cut(s) 425, 524
EaeI YGGCCR 4 cut(s) 1260, 2099, 2475, 2517
Eam1104I CTCTTC 4 cut(s) 101, 221, 1176, 1843
EarI CTCTTC 4 cut(s) 101, 221, 1176, 1843
EciI GGCGGA 1 cut(s) 349
Eco130I CCWWGG 5 cut(s) 339, 1263, 2394, 2478, 2520
Eco147I AGGCCT 1 cut(s) 67
Eco24I GRGCYC 2 cut(s) 1421, 1491
Eco31I GGTCTC 1 cut(s) 349
Eco47I GGWCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
Eco57I CTGAAG 1 cut(s) 311
Eco88I CYCGRG 1 cut(s) 368
Eco91I GGTNACC 1 cut(s) 373
EcoNI CCTNNNNNAGG 1 cut(s) 338
EcoO109I RGGNCCY 2 cut(s) 574, 595
EcoO65I GGTNACC 1 cut(s) 373
EcoRII CCWGG 6 cut(s) 429, 483, 494, 564, 668, 923
EcoT14I CCWWGG 5 cut(s) 339, 1263, 2394, 2478, 2520
EcoT38I GRGCYC 2 cut(s) 1421, 1491
EgeI GGCGCC 6 cut(s) 619, 919, 1975, 2400, 2484, 2526
EheI GGCGCC 6 cut(s) 619, 919, 1975, 2400, 2484, 2526
ErhI CCWWGG 5 cut(s) 339, 1263, 2394, 2478, 2520
Esp3I CGTCTC 1 cut(s) 1187
FaeI CATG 9 cut(s) 260, 547, 610, 841, 1070, 1550, 2398, 2482, 2524
FaqI GGGAC 4 cut(s) 587, 686, 1004, 1132
FatI CATG 9 cut(s) 256, 543, 606, 837, 1066, 1546, 2394, 2478, 2520
FauI CCCGC 1 cut(s) 2023
FauNDI CATATG 2 cut(s) 2449, 2766
FbaI TGATCA 2 cut(s) 1399, 1639
FokI GGATG 3 cut(s) 457, 581, 1496
FriOI GRGCYC 2 cut(s) 1421, 1491
FspBI CTAG 3 cut(s) 1161, 1625, 2670
GsaI CCCAGC 1 cut(s) 1666
GsuI CTGGAG 1 cut(s) 731
HaeII RGCGCY 9 cut(s) 621, 721, 757, 921, 1854, 1977, 2402, 2486, 2528
HaeIII GGCC 7 cut(s) 67, 488, 1262, 1364, 2101, 2477, 2519
HgaI GACGC 1 cut(s) 1323
Hin1I GRCGYC 8 cut(s) 402, 618, 918, 1334, 1974, 2399, 2483, 2525
Hin1II CATG 9 cut(s) 260, 547, 610, 841, 1070, 1550, 2398, 2482, 2524
HindIII AAGCTT 1 cut(s) 1221
HphI GGTGA 8 cut(s) 119, 367, 670, 727, 1710, 2079, 2222, 2283
Hpy166II GTNNAC 9 cut(s) 42, 1057, 2147, 2189, 2213, 2372, 2456, 2498, 2675
Hpy188III TCNNGA 8 cut(s) 257, 833, 968, 1019, 1643, 1802, 2423, 2702
Hpy8I GTNNAC 9 cut(s) 42, 1057, 2147, 2189, 2213, 2372, 2456, 2498, 2675
HpyAV CCTTC 6 cut(s) 144, 289, 694, 706, 1207, 1917
HpyCH4III ACNGT 1 cut(s) 379
HpyCH4IV ACGT 9 cut(s) 38, 402, 426, 761, 1121, 1196, 1370, 2619, 2645
HpyF3I CTNAG 4 cut(s) 31, 1152, 1453, 1771
HpySE526I ACGT 9 cut(s) 38, 402, 426, 761, 1121, 1196, 1370, 2619, 2645
Hsp92I GRCGYC 8 cut(s) 402, 618, 918, 1334, 1974, 2399, 2483, 2525
Hsp92II CATG 9 cut(s) 260, 547, 610, 841, 1070, 1550, 2398, 2482, 2524
KasI GGCGCC 6 cut(s) 617, 917, 1973, 2398, 2482, 2524
KflI GGGWCCC 1 cut(s) 574
KroI GCCGGC 2 cut(s) 844, 1474
KroNI GCCGGC 2 cut(s) 846, 1476
Ksp22I TGATCA 2 cut(s) 1399, 1639
KspI CCGCGG 1 cut(s) 2415
LguI GCTCTTC 1 cut(s) 1176
LmnI GCTCC 9 cut(s) 750, 798, 1099, 1318, 1435, 1459, 1666, 2193, 2606
Lsp1109I GCAGC 6 cut(s) 801, 840, 870, 1844, 2292, 2551
LweI GCATC 5 cut(s) 479, 510, 567, 840, 2725
MaeI CTAG 3 cut(s) 1161, 1625, 2670
MaeII ACGT 9 cut(s) 38, 402, 426, 761, 1121, 1196, 1370, 2619, 2645
MaeIII GTNAC 7 cut(s) 34, 373, 515, 2002, 2085, 2510, 2659
MfeI CAATTG 2 cut(s) 300, 1034
MflI RGATCY 2 cut(s) 624, 1173
MhlI GDGCHC 7 cut(s) 1421, 1491, 1779, 2149, 2198, 2374, 2500
MlsI TGGCCA 1 cut(s) 2101
MluI ACGCGT 1 cut(s) 1059
MluNI TGGCCA 1 cut(s) 2101
Mly113I GGCGCC 6 cut(s) 618, 918, 1974, 2399, 2483, 2525
MlyI GAGTC 5 cut(s) 36, 66, 647, 1243, 1691
MmeI TCCRAC 7 cut(s) 372, 663, 681, 1124, 1317, 1356, 2715
Mox20I TGGCCA 1 cut(s) 2101
MroNI GCCGGC 2 cut(s) 844, 1474
MroXI GAANNNNTTC 1 cut(s) 1091
MscI TGGCCA 1 cut(s) 2101
MseI TTAA 7 cut(s) 15, 251, 272, 1256, 1952, 2240, 2343
MslI CAYNNNNRTG 2 cut(s) 2126, 2519
Msp20I TGGCCA 1 cut(s) 2101
MspA1I CMGCKG 2 cut(s) 751, 2414
MteI GCGCNGCGC 1 cut(s) 616
MunI CAATTG 2 cut(s) 300, 1034
Mva1269I GAATGC 1 cut(s) 2334
MvaI CCWGG 6 cut(s) 431, 485, 496, 566, 670, 925
NaeI GCCGGC 2 cut(s) 846, 1476
NarI GGCGCC 6 cut(s) 618, 918, 1974, 2399, 2483, 2525
NciI CCSGG 4 cut(s) 739, 893, 989, 1941
NcoI CCATGG 3 cut(s) 2394, 2478, 2520
NdeI CATATG 2 cut(s) 2449, 2766
NgoMIV GCCGGC 2 cut(s) 844, 1474
NlaIII CATG 9 cut(s) 260, 547, 610, 841, 1070, 1550, 2398, 2482, 2524
NmuCI GTSAC 6 cut(s) 34, 373, 515, 2085, 2510, 2659
NruI TCGCGA 2 cut(s) 834, 2424
NspV TTCGAA 2 cut(s) 1326, 1841
PaeR7I CTCGAG 1 cut(s) 368
PagI TCATGA 1 cut(s) 256
PasI CCCWGGG 1 cut(s) 669
PceI AGGCCT 1 cut(s) 67
PciSI GCTCTTC 1 cut(s) 1176
PcsI WCGNNNNNNNCGW 8 cut(s) 375, 411, 449, 461, 720, 956, 1367, 1887
PctI GAATGC 1 cut(s) 2334
PdiI GCCGGC 2 cut(s) 846, 1476
PdmI GAANNNNTTC 1 cut(s) 1091
PfeI GAWTC 6 cut(s) 186, 865, 1736, 1843, 2377, 2698
Pfl23II CGTACG 1 cut(s) 465
PflFI GACNNNGTC 1 cut(s) 7
PflMI CCANNNNNTGG 2 cut(s) 2450, 2492
PfoI TCCNGGA 3 cut(s) 429, 564, 1939
PinAI ACCGGT 1 cut(s) 933
Ple19I CGATCG 1 cut(s) 963
PleI GAGTC 5 cut(s) 35, 65, 647, 1242, 1690
PluTI GGCGCC 6 cut(s) 621, 921, 1977, 2402, 2486, 2528
PpsI GAGTC 5 cut(s) 35, 65, 647, 1242, 1690
Ppu21I YACGTR 1 cut(s) 762
PpuMI RGGWCCY 2 cut(s) 574, 595
PshBI ATTAAT 2 cut(s) 251, 2240
PsiI TTATAA 1 cut(s) 1449
Psp5II RGGWCCY 2 cut(s) 574, 595
Psp6I CCWGG 6 cut(s) 429, 483, 494, 564, 668, 923
PspEI GGTNACC 1 cut(s) 373
PspFI CCCAGC 1 cut(s) 1662
PspGI CCWGG 6 cut(s) 429, 483, 494, 564, 668, 923
PspLI CGTACG 1 cut(s) 465
PspPI GGNCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
PspPPI RGGWCCY 2 cut(s) 574, 595
PspXI VCTCGAGB 1 cut(s) 368
PsrI GAACNNNNNNTAC 2 cut(s) 449, 481
PsuI RGATCY 2 cut(s) 624, 1173
PsyI GACNNNGTC 1 cut(s) 7
PvuI CGATCG 1 cut(s) 963
RruI TCGCGA 2 cut(s) 834, 2424
RsaI GTAC 6 cut(s) 425, 467, 764, 1815, 2190, 2457
RsaNI GTAC 6 cut(s) 424, 466, 763, 1814, 2189, 2456
RseI CAYNNNNRTG 2 cut(s) 2126, 2519
SacII CCGCGG 1 cut(s) 2415
SapI GCTCTTC 1 cut(s) 1176
SaqAI TTAA 7 cut(s) 15, 251, 272, 1256, 1952, 2240, 2343
Sau96I GGNCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
SchI GAGTC 5 cut(s) 36, 66, 647, 1243, 1691
SduI GDGCHC 7 cut(s) 1421, 1491, 1779, 2149, 2198, 2374, 2500
SfaNI GCATC 5 cut(s) 479, 510, 567, 840, 2725
SfoI GGCGCC 6 cut(s) 619, 919, 1975, 2400, 2484, 2526
Sfr274I CTCGAG 1 cut(s) 368
Sfr303I CCGCGG 1 cut(s) 2415
SfuI TTCGAA 2 cut(s) 1326, 1841
SgrBI CCGCGG 1 cut(s) 2415
SinI GGWCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
SlaI CTCGAG 1 cut(s) 368
SmiMI CAYNNNNRTG 2 cut(s) 2126, 2519
SmlI CTYRAG 2 cut(s) 61, 368
SmoI CTYRAG 2 cut(s) 61, 368
SpeI ACTAGT 1 cut(s) 1624
SseBI AGGCCT 1 cut(s) 67
SspDI GGCGCC 6 cut(s) 617, 917, 1973, 2398, 2482, 2524
SspI AATATT 1 cut(s) 2238
SspMI CTAG 3 cut(s) 1161, 1625, 2670
StuI AGGCCT 1 cut(s) 67
StyI CCWWGG 5 cut(s) 339, 1263, 2394, 2478, 2520
TaaI ACNGT 1 cut(s) 379
TaiI ACGT 9 cut(s) 41, 405, 429, 764, 1124, 1199, 1373, 2622, 2648
TaqII GACCGA 1 cut(s) 1227
TatI WGTACW 1 cut(s) 2455
TauI GCSGC 5 cut(s) 618, 754, 804, 923, 1246
TfiI GAWTC 6 cut(s) 186, 865, 1736, 1843, 2377, 2698
Tru1I TTAA 7 cut(s) 15, 251, 272, 1256, 1952, 2240, 2343
Tru9I TTAA 7 cut(s) 15, 251, 272, 1256, 1952, 2240, 2343
TscAI CASTG 2 cut(s) 315, 1779
TseFI GTSAC 6 cut(s) 34, 373, 515, 2085, 2510, 2659
TseI GCWGC 6 cut(s) 789, 853, 883, 1832, 2280, 2564
Tsp45I GTSAC 6 cut(s) 34, 373, 515, 2085, 2510, 2659
TspDTI ATGAA 9 cut(s) 245, 623, 854, 1055, 1215, 1728, 2130, 2548, 2609
TspGWI ACGGA 1 cut(s) 2206
TspRI CASTG 2 cut(s) 315, 1779
Tth111I GACNNNGTC 1 cut(s) 7
Van91I CCANNNNNTGG 2 cut(s) 2450, 2492
VneI GTGCAC 3 cut(s) 2145, 2370, 2496
VpaK11BI GGWCC 6 cut(s) 574, 595, 859, 889, 1146, 1216
VspI ATTAAT 2 cut(s) 251, 2240
XagI CCTNNNNNAGG 1 cut(s) 338
XapI RAATTY 4 cut(s) 195, 435, 1304, 1948
XhoI CTCGAG 1 cut(s) 368
XmnI GAANNNNTTC 1 cut(s) 1091
XspI CTAG 3 cut(s) 1161, 1625, 2670
ZraI GACGTC 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.