RLG00000021052

Clathrin coat assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0014561
Physical Location & Seq
Reverse (-)
71436493 .. 71439201
2709 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021052

Sequence Viewer

Length: 2709 bp
ATGCCAAGCAAGTTAAAGAAGGCAATCGGGGCAGTGAAAGACCAGACGAGCATAAGCCTAGCCAAGGTCTCCAACACCTCCAACCTCGCCAGCCTCGAAGTCACCATCCTCAAGGCCACCTCCCACGACGTCGTTCCGATCGACGACAAGTACGTCCGTGAGATCCTCTCCCTCATCTCCGCCTCCAAATCCAACGCCGCTACCTGCGCCCAAGCCATCGCCAAACGCATCGGCAAGACCCGCAACTGGATCGTCGCCATCAAGTCCCTCATGCTCGTCCTCCGAATCTTCCAGGATGGCGACCCCTATTTCCCCATTGAAGTCCTCCACACCATGAAACGTGGCGCCAAGATCCTTAACCTCTCCAATTTTCGTGATGACTCGACCTCATGTCCCTGGGACTACACCGCCTTCGTCCGCAACTTCGCTCTCTACCTTGAAGAAAGGCTCGACTGCTTCCTCACCGGAAAGCTCCAGCGGCGTTTCACCTATCAGCGAAATCAGGATTGCATTATCATCAACAACACCCGTAACAGCCGACGAGGCAATAATAATGAACCTGTGGTTCGGGACATGAAGCCGGCGATGCTGCTGGACCGGATTCAATTCTGGCAGAAACTGCTGGATCGAGCCATTGCCTTAATCCCCTCCGGTGCCGCCAAAACGAACCGTCTAATCCTTATTTCCCTCTACGCAATCGTCCAGGAGACCTACGATCTATATAGAGACATTTCGGACGGGCTGGCTTTGCTTTTAGATAGCTTTTTTCATCTCCAATACCATTCATGTCTAAGTGCTTTTCATGCATGCGTAACAGCCTCGAAGCAATTCGAAGAGCTTTCTACTTTTTATGGAACTTGCAAGGCGTTAGGTGTTGGGAGGACCTCTGAGTATCCAAGCGTGCAGAAAATTTCTGAGGAGCTGATCGAGACATTGCAGGAGTTTGTGAAAGACCAAGCTTCATTTCCAGGTCGATCGCCGCCCCAGTATATGAATCAGAATGTTAAAGATAAAGGGGCGGCGTCCAGCCCGGACCAATTTGAGTTTGCTAATTCGGAGCCCTTGGAGGGTGCATCGGAGAGAGGCTCTGCTTTTGGTTCTGCTTGTACGTCGTTATCGGATTTGATGAGTGTTGGCGGTATAGAAAATGGGGCTAGCCCATCGTGGTCGGCGGAGCAAGATTTTCTTACCTCCGATGAGCAATTGTCTGAGAAGACCCTGTCTCCATTTCAGTCACCATTACCGGAATTCATGGTTGGTAGTAATGATAAATCATCGAGCCAATCTTTGCCGCAGATTGATCTTTTTGAGGTCTTTCCACCACAACAAATAGATCAGGTTCAACAAGCTAATCAAGAAGGTGAAAAACTTGCATGGGAACTTGTTCTCTTTGAGTCTGCAAATCAAAGTGGTGCAATGGAAACATCATCGATTGCTTCGCCTCCTCCCAACCTGTTTGCTTCTCATTCTCCTAACCTGTCTCCTAATCTGTTGGAGTCATCGTCCAGCCCGGACTTGGACTATTTCTTTCAGAATTCTTTGACGAGCAATGCATTACACCAAAACAATCCATTTCTTCAAGACATTGTACAAGTTGAGGGCTTTGCGATTCCCACTTCCAATGAGACAAGTAGTAATGCTGGCCTAGAAAATTTGGACGATTTGTTTACGTTCCCTTCCACATCTCAGCCATCGGCACCACCAACATTTGGTGTGCCGAGTTCCAATGGAAGCACAGTGGCTCCAACGTTTGTGGCTGACAGTTCAGAACAAAGCACAATGTTACCCACATTTTCGTTACATAATTCAAATGGGAATACAATGGCACCAACATTCTTGGCCAATAATCCAAAACAAGGCACAATGTCTCCTACATTTTCTGCACAGAACTCAAATGGGAGAAATGTAGCGCCAACGTACTTGGAGCAGAGTACAAAACAAAGCACGATGTCACCAAGGTTTTCTTCACAGAACTCAAATGAGAGGGCGGTGGCTCCAACCTTTTGTACGGCGGATACAATAGATAGCACAGTGGTACCAACAAATCCAAATGAGACTGAAATTGCACCAACATTTTCAGCTCAGTGTGGGGAAGGAAGCTCAATGTCACCACCTCTTTGTGCGCAGAATACAAATAATAGCATAACAGCACCAACATTTCAAGCAGATTTTCCGAGGGATAGGACTTTGGCACTTCCATCTTGTGCAGAAAATTTGAAAGAGACTGAAATCGCACCATCATTTTCTGCTCAAAGTCCTGAAGGAAGCTCATTTTCACCATCCTTTTGTGCACAGAATACAAATAATAGCATAACAGCACCAACATTTCATGCAGAATTTCCAAAGGATAAGACTTTGGCCCTTTCAATTTATGCAGAAAATTCTAGAGAGAGCAGATTGTCGCAAACGTTTGGGGAGCTGACTCCTAACAATGGGAGTGTAGTAGCACCAACCTTCAGTTCAGAGGAACCTAATGAGTTCATGGCCGTGCCAACTTTCTCGGCAAAGAGCAGTACTAATGGCAACGAGACACCAAGGTTTGGTTCGCCATTTGCTATCCAAAGTGATGACCCGTTCGGACCCTTCTCTGGCGTGACAAGTACAAGTGAAACTATGTGTAATGGAATAGTGAATCAAGAAACTGTGTTGCATCAACAAAGACAGTGGTTGGAGCAACAAAACAAGATTATTGCTAAGCATTTGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

903

Amino Acids

98.5

Weight (kDa)

4.91

Isoelectric Point (pI)

54.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 32 - 318 1.3e-77 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014561)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05020
fragaria_vesca FvH4_6g42130 FvH4_6g42160 FvH4_6g42170
malus_domestica MD09G1114300.v1.1 MD17G1106000.v1.1
prunus_persica Prupe.3G210200_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0158041
rosa_laevigata RLG00000021052
rosa_multiflora Rmu_sc0000419.1_g000017
rosa_roxburghii Rroxscaffold_2G00091720
rosa_rugosa Rorug02G0465400
rosa_samantha Rh2AG531400 Rh2BG545900 Rh2CG515700 Rh2DG554000
rosa_wichuraiana Rw2G043950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 152
AatII GACGTC 1 cut(s) 132
Acc16I TGCGCA 1 cut(s) 2124
Acc36I ACCTGC 1 cut(s) 212
Acc65I GGTACC 1 cut(s) 2035
AccB1I GGYRCC 5 cut(s) 344, 653, 1696, 1825, 2035
AccB7I CCANNNNNTGG 2 cut(s) 1709, 2540
AclI AACGTT 2 cut(s) 1748, 2408
AclWI GGATC 4 cut(s) 157, 257, 346, 633
AcoI YGGCCR 2 cut(s) 1839, 2484
AcsI RAATTY 7 cut(s) 909, 1247, 1534, 1651, 2212, 2336, 2380
AcuI CTGAAG 2 cut(s) 2280, 2440
AcyI GRCGYC 3 cut(s) 129, 345, 1022
AfaI GTAC 9 cut(s) 152, 1108, 1590, 1919, 1933, 2008, 2037, 2515, 2602
AfiI CCNNNNNNNGG 9 cut(s) 64, 246, 1067, 1516, 1709, 1856, 2432, 2540, 2588
AgsI TTSAA 9 cut(s) 320, 440, 605, 1343, 1580, 1809, 2162, 2218, 2367
AhdI GACNNNNNGTC 1 cut(s) 390
AjnI CCWGG 4 cut(s) 291, 395, 702, 967
Alw21I GWGCWC 1 cut(s) 2293
Alw44I GTGCAC 1 cut(s) 2289
AlwI GGATC 4 cut(s) 157, 257, 346, 633
AlwNI CAGNNNCTG 1 cut(s) 619
AoxI GGCC 5 cut(s) 114, 1642, 1839, 2358, 2484
ApaLI GTGCAC 1 cut(s) 2289
ApeKI GCWGC 1 cut(s) 589
ApoI RAATTY 7 cut(s) 909, 1247, 1534, 1651, 2212, 2336, 2380
Asp700I GAANNNNTTC 2 cut(s) 827, 1383
Asp718I GGTACC 1 cut(s) 2035
AspLEI GCGC 4 cut(s) 209, 347, 1912, 2125
AspS9I GGNCC 5 cut(s) 595, 882, 1033, 2359, 2579
AsuC2I CCSGG 2 cut(s) 1031, 1511
AsuHPI GGTGA 8 cut(s) 94, 454, 478, 1227, 1373, 1944, 2100, 2268
AsuII TTCGAA 1 cut(s) 831
AsuNHI GCTAGC 1 cut(s) 1154
AvaII GGWCC 4 cut(s) 595, 882, 1033, 2579
BaeGI GKGCMC 1 cut(s) 2293
BaeI ACNNNNGTAYC 2 cut(s) 2019, 2052
BalI TGGCCA 1 cut(s) 1841
BanI GGYRCC 5 cut(s) 344, 653, 1696, 1825, 2035
BanII GRGCYC 1 cut(s) 1062
BbsI GAAGAC 1 cut(s) 1220
Bbv12I GWGCWC 1 cut(s) 2293
BbvI GCAGC 1 cut(s) 576
BccI CCATC 9 cut(s) 113, 224, 266, 290, 1168, 1699, 2206, 2245, 2287
BceAI ACGGC 2 cut(s) 2025, 2471
BcgI CGANNNNNNTGC 2 cut(s) 232, 266
BciT130I CCWGG 4 cut(s) 293, 397, 704, 969
BciVI GTATCC 2 cut(s) 903, 2008
BcnI CCSGG 2 cut(s) 1031, 1511
BfaI CTAG 4 cut(s) 59, 1155, 1646, 2385
BfoI RGCGCY 2 cut(s) 348, 1913
BfuAI ACCTGC 1 cut(s) 212
BfuI GTATCC 2 cut(s) 903, 2008
BglI GCCNNNNNGGC 1 cut(s) 543
BisI GCNGC 7 cut(s) 198, 479, 590, 657, 980, 1020, 1292
BlpI GCTNAGC 1 cut(s) 2694
BlsI GCNGC 7 cut(s) 199, 480, 591, 658, 981, 1021, 1293
BmcAI AGTACT 1 cut(s) 2515
Bme1390I CCNGG 6 cut(s) 293, 397, 704, 969, 1031, 1511
Bme18I GGWCC 4 cut(s) 595, 882, 1033, 2579
BmeRI GACNNNNNGTC 1 cut(s) 390
BmgT120I GGNCC 5 cut(s) 595, 882, 1033, 2359, 2579
BmrFI CCNGG 6 cut(s) 293, 397, 704, 969, 1031, 1511
BmrI ACTGGG 1 cut(s) 979
BmsI GCATC 4 cut(s) 237, 576, 1082, 2659
BmtI GCTAGC 1 cut(s) 1158
BmuI ACTGGG 1 cut(s) 979
BpiI GAAGAC 1 cut(s) 1220
BplI GAGNNNNNCTC 4 cut(s) 152, 184, 1070, 1102
BpmI CTGGAG 1 cut(s) 458
Bpu1102I GCTNAGC 1 cut(s) 2694
Bpu14I TTCGAA 1 cut(s) 831
BpuEI CTTGAG 1 cut(s) 95
BpuMI CCSGG 2 cut(s) 1031, 1511
Bsa29I ATCGAT 1 cut(s) 1430
BsaHI GRCGYC 3 cut(s) 129, 345, 1022
BsaI GGTCTC 2 cut(s) 73, 701
BsaJI CCNNGG 7 cut(s) 63, 395, 396, 1062, 1955, 2174, 2534
BsaWI WCCGGW 4 cut(s) 464, 597, 650, 1243
BsaXI ACNNNNNCTCC 8 cut(s) 1207, 1237, 1487, 1517, 1726, 1756, 1852, 1882
Bsc4I CCNNNNNNNGG 9 cut(s) 64, 246, 1067, 1516, 1709, 1856, 2432, 2540, 2588
Bse118I RCCGGY 1 cut(s) 580
Bse1I ACTGG 2 cut(s) 251, 985
Bse3DI GCAATG 4 cut(s) 633, 932, 1422, 1555
BseBI CCWGG 4 cut(s) 293, 397, 704, 969
BseCI ATCGAT 1 cut(s) 1430
BseDI CCNNGG 7 cut(s) 63, 395, 396, 1062, 1955, 2174, 2534
BseGI GGATG 3 cut(s) 105, 301, 2279
BseLI CCNNNNNNNGG 9 cut(s) 64, 246, 1067, 1516, 1709, 1856, 2432, 2540, 2588
BseMI GCAATG 4 cut(s) 633, 932, 1422, 1555
BseMII CTCAG 5 cut(s) 879, 906, 1200, 1700, 2096
BseNI ACTGG 2 cut(s) 251, 985
BseRI GAGGAG 2 cut(s) 932, 1434
BseSI GKGCMC 1 cut(s) 2293
BseXI GCAGC 1 cut(s) 576
BsgI GTGCAG 3 cut(s) 923, 1866, 2226
Bsh1285I CGRYCG 2 cut(s) 141, 977
BshFI GGCC 5 cut(s) 116, 1644, 1841, 2360, 2486
BshNI GGYRCC 5 cut(s) 344, 653, 1696, 1825, 2035
BshVI ATCGAT 1 cut(s) 1430
BsiEI CGRYCG 2 cut(s) 141, 977
BsiHKAI GWGCWC 1 cut(s) 2293
BsiSI CCGG 7 cut(s) 465, 581, 598, 651, 1031, 1244, 1511
BslFI GGGAC 4 cut(s) 250, 378, 413, 584
BslI CCNNNNNNNGG 9 cut(s) 64, 246, 1067, 1516, 1709, 1856, 2432, 2540, 2588
BsmFI GGGAC 4 cut(s) 250, 378, 413, 584
BsnI GGCC 5 cut(s) 116, 1644, 1841, 2360, 2486
Bso31I GGTCTC 2 cut(s) 73, 701
Bsp119I TTCGAA 1 cut(s) 831
Bsp1286I GDGCHC 2 cut(s) 1062, 2293
Bsp1407I TGTACA 1 cut(s) 1588
Bsp1720I GCTNAGC 1 cut(s) 2694
BspANI GGCC 5 cut(s) 116, 1644, 1841, 2360, 2486
BspCNI CTCAG 5 cut(s) 880, 907, 1201, 1699, 2095
BspDI ATCGAT 1 cut(s) 1430
BspMI ACCTGC 1 cut(s) 212
BspOI GCTAGC 1 cut(s) 1158
BspPI GGATC 4 cut(s) 157, 257, 346, 633
BspQI GCTCTTC 1 cut(s) 828
BspT104I TTCGAA 1 cut(s) 831
BspT107I GGYRCC 5 cut(s) 344, 653, 1696, 1825, 2035
BspTNI GGTCTC 2 cut(s) 73, 701
BsrDI GCAATG 4 cut(s) 633, 932, 1422, 1555
BsrFI RCCGGY 1 cut(s) 580
BsrGI TGTACA 1 cut(s) 1588
BsrI ACTGG 2 cut(s) 251, 985
BssAI RCCGGY 1 cut(s) 580
BssECI CCNNGG 7 cut(s) 63, 395, 396, 1062, 1955, 2174, 2534
BssNI GRCGYC 3 cut(s) 129, 345, 1022
BssT1I CCWWGG 4 cut(s) 63, 1062, 1955, 2534
Bst2UI CCWGG 4 cut(s) 293, 397, 704, 969
Bst4CI ACNGT 6 cut(s) 671, 1738, 1763, 2032, 2644, 2664
Bst6I CTCTTC 1 cut(s) 828
BstACI GRCGYC 3 cut(s) 129, 345, 1022
BstAPI GCANNNNNTGC 1 cut(s) 619
BstAUI TGTACA 1 cut(s) 1588
BstBI TTCGAA 1 cut(s) 831
BstC8I GCNNGC 7 cut(s) 91, 582, 744, 808, 902, 1156, 1642
BstDEI CTNAG 7 cut(s) 791, 888, 915, 1209, 1686, 2082, 2694
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 3 cut(s) 105, 301, 2279
BstH2I RGCGCY 2 cut(s) 348, 1913
BstHHI GCGC 4 cut(s) 209, 347, 1912, 2125
BstMCI CGRYCG 2 cut(s) 141, 977
BstMWI GCNNNNNNNGC 9 cut(s) 29, 206, 240, 478, 543, 586, 619, 748, 803
BstNI CCWGG 4 cut(s) 293, 397, 704, 969
BstNSI RCATGY 1 cut(s) 810
BstSCI CCNGG 6 cut(s) 291, 395, 702, 967, 1029, 1509
BstSLI GKGCMC 1 cut(s) 2293
BstV1I GCAGC 1 cut(s) 576
BstV2I GAAGAC 1 cut(s) 1220
BstX2I RGATCY 2 cut(s) 162, 351
BstYI RGATCY 2 cut(s) 162, 351
Bsu15I ATCGAT 1 cut(s) 1430
BsuI GTATCC 2 cut(s) 903, 2008
BsuRI GGCC 5 cut(s) 116, 1644, 1841, 2360, 2486
BsuTUI ATCGAT 1 cut(s) 1430
BtgZI GCGATG 2 cut(s) 202, 599
BtsCI GGATG 3 cut(s) 105, 301, 2279
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 5 cut(s) 39, 1743, 2037, 2090, 2669
BveI ACCTGC 1 cut(s) 212
Cac8I GCNNGC 7 cut(s) 91, 582, 744, 808, 902, 1156, 1642
CaiI CAGNNNCTG 1 cut(s) 619
CfoI GCGC 4 cut(s) 209, 347, 1912, 2125
Cfr10I RCCGGY 1 cut(s) 580
Cfr13I GGNCC 5 cut(s) 595, 882, 1033, 2359, 2579
ClaI ATCGAT 1 cut(s) 1430
CseI GACGC 1 cut(s) 1011
Csp6I GTAC 9 cut(s) 151, 1107, 1589, 1918, 1932, 2007, 2036, 2514, 2601
CspCI CAANNNNNGTGG 4 cut(s) 1734, 1769, 2645, 2680
CviQI GTAC 9 cut(s) 151, 1107, 1589, 1918, 1932, 2007, 2036, 2514, 2601
DdeI CTNAG 7 cut(s) 791, 888, 915, 1209, 1686, 2082, 2694
DinI GGCGCC 1 cut(s) 346
DrdI GACNNNNNNGTC 1 cut(s) 152
DriI GACNNNNNGTC 1 cut(s) 390
DseDI GACNNNNNNGTC 1 cut(s) 152
EaeI YGGCCR 2 cut(s) 1839, 2484
Eam1104I CTCTTC 1 cut(s) 828
Eam1105I GACNNNNNGTC 1 cut(s) 390
EarI CTCTTC 1 cut(s) 828
EciI GGCGGA 3 cut(s) 169, 1187, 2027
Eco130I CCWWGG 4 cut(s) 63, 1062, 1955, 2534
Eco24I GRGCYC 1 cut(s) 1062
Eco31I GGTCTC 2 cut(s) 73, 701
Eco47I GGWCC 4 cut(s) 595, 882, 1033, 2579
Eco57I CTGAAG 2 cut(s) 2280, 2440
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 1 cut(s) 882
EcoRI GAATTC 2 cut(s) 1247, 1534
EcoRII CCWGG 4 cut(s) 291, 395, 702, 967
EcoT14I CCWWGG 4 cut(s) 63, 1062, 1955, 2534
EcoT22I ATGCAT 2 cut(s) 808, 1555
EcoT38I GRGCYC 1 cut(s) 1062
EgeI GGCGCC 1 cut(s) 346
EheI GGCGCC 1 cut(s) 346
ErhI CCWWGG 4 cut(s) 63, 1062, 1955, 2534
FalI AAGNNNNNCTT 4 cut(s) 1170, 1202, 1948, 1980
FaqI GGGAC 4 cut(s) 250, 378, 413, 584
FauI CCCGC 1 cut(s) 248
Fnu4HI GCNGC 7 cut(s) 198, 479, 590, 657, 980, 1020, 1292
FokI GGATG 3 cut(s) 92, 308, 2266
FriOI GRGCYC 1 cut(s) 1062
Fsp4HI GCNGC 7 cut(s) 198, 479, 590, 657, 980, 1020, 1292
FspBI CTAG 4 cut(s) 59, 1155, 1646, 2385
FspI TGCGCA 1 cut(s) 2124
GlaI GCGC 4 cut(s) 208, 346, 1911, 2124
GluI GCNGC 7 cut(s) 198, 479, 590, 657, 980, 1020, 1292
GsuI CTGGAG 1 cut(s) 458
HaeII RGCGCY 2 cut(s) 348, 1913
HaeIII GGCC 5 cut(s) 116, 1644, 1841, 2360, 2486
HapII CCGG 7 cut(s) 465, 581, 598, 651, 1031, 1244, 1511
HgaI GACGC 1 cut(s) 1011
HhaI GCGC 4 cut(s) 209, 347, 1912, 2125
Hin1I GRCGYC 3 cut(s) 129, 345, 1022
Hin6I GCGC 4 cut(s) 207, 345, 1910, 2123
HinP1I GCGC 4 cut(s) 207, 345, 1910, 2123
HindIII AAGCTT 1 cut(s) 957
HinfI GANTC 9 cut(s) 285, 380, 601, 994, 1394, 1496, 1609, 2422, 2632
HpaII CCGG 7 cut(s) 465, 581, 598, 651, 1031, 1244, 1511
HphI GGTGA 8 cut(s) 94, 454, 478, 1227, 1373, 1944, 2100, 2268
Hpy166II GTNNAC 2 cut(s) 1668, 2291
Hpy188III TCNNGA 9 cut(s) 374, 503, 569, 928, 1355, 1580, 2258, 2385, 2636
Hpy8I GTNNAC 2 cut(s) 1668, 2291
Hpy99I CGWCG 6 cut(s) 131, 134, 146, 257, 543, 1114
HpyAV CCTTC 8 cut(s) 13, 421, 1352, 1686, 2087, 2255, 2464, 2593
HpyCH4III ACNGT 6 cut(s) 671, 1738, 1763, 2032, 2644, 2664
HpyCH4IV ACGT 8 cut(s) 129, 153, 340, 1109, 1670, 1748, 1916, 2408
HpyF10VI GCNNNNNNNGC 9 cut(s) 29, 206, 240, 478, 543, 586, 619, 748, 803
HpyF3I CTNAG 7 cut(s) 791, 888, 915, 1209, 1686, 2082, 2694
HpySE526I ACGT 8 cut(s) 129, 153, 340, 1109, 1670, 1748, 1916, 2408
Hsp92I GRCGYC 3 cut(s) 129, 345, 1022
HspAI GCGC 4 cut(s) 207, 345, 1910, 2123
KasI GGCGCC 1 cut(s) 344
KpnI GGTACC 1 cut(s) 2039
KroI GCCGGC 1 cut(s) 580
KroNI GCCGGC 1 cut(s) 582
LguI GCTCTTC 1 cut(s) 828
LmnI GCTCC 9 cut(s) 477, 919, 1057, 1174, 1747, 1924, 1999, 2416, 2671
Lsp1109I GCAGC 1 cut(s) 576
LweI GCATC 4 cut(s) 237, 576, 1082, 2659
MaeI CTAG 4 cut(s) 59, 1155, 1646, 2385
MaeII ACGT 8 cut(s) 129, 153, 340, 1109, 1670, 1748, 1916, 2408
MaeIII GTNAC 9 cut(s) 100, 530, 811, 1233, 1782, 1797, 1950, 2106, 2593
MboII GAAGA 6 cut(s) 280, 452, 845, 1225, 1568, 1956
MfeI CAATTG 1 cut(s) 1202
MflI RGATCY 2 cut(s) 162, 351
MhlI GDGCHC 2 cut(s) 1062, 2293
MlsI TGGCCA 1 cut(s) 1841
MluNI TGGCCA 1 cut(s) 1841
Mly113I GGCGCC 1 cut(s) 345
MlyI GAGTC 4 cut(s) 374, 1403, 1505, 2416
MmeI TCCRAC 7 cut(s) 96, 105, 216, 1473, 1769, 2021, 2649
Mox20I TGGCCA 1 cut(s) 1841
Mph1103I ATGCAT 2 cut(s) 808, 1555
MroNI GCCGGC 1 cut(s) 580
MroXI GAANNNNTTC 2 cut(s) 827, 1383
MscI TGGCCA 1 cut(s) 1841
MseI TTAA 4 cut(s) 14, 357, 641, 1005
MslI CAYNNNNRTG 1 cut(s) 2486
Msp20I TGGCCA 1 cut(s) 1841
MspA1I CMGCKG 1 cut(s) 478
MspI CCGG 7 cut(s) 465, 581, 598, 651, 1031, 1244, 1511
MspR9I CCNGG 6 cut(s) 293, 397, 704, 969, 1031, 1511
MunI CAATTG 1 cut(s) 1202
MvaI CCWGG 4 cut(s) 293, 397, 704, 969
MwoI GCNNNNNNNGC 9 cut(s) 29, 206, 240, 478, 543, 586, 619, 748, 803
NaeI GCCGGC 1 cut(s) 582
NarI GGCGCC 1 cut(s) 345
NciI CCSGG 2 cut(s) 1031, 1511
NgoMIV GCCGGC 1 cut(s) 580
NheI GCTAGC 1 cut(s) 1154
NmeAIII GCCGAG 2 cut(s) 1743, 2480
NmuCI GTSAC 5 cut(s) 100, 1233, 1950, 2106, 2593
NsbI TGCGCA 1 cut(s) 2124
NsiI ATGCAT 2 cut(s) 808, 1555
NspI RCATGY 1 cut(s) 810
NspV TTCGAA 1 cut(s) 831
PaeI GCATGC 1 cut(s) 810
PasI CCCWGGG 1 cut(s) 396
PciSI GCTCTTC 1 cut(s) 828
PcsI WCGNNNNNNNCGW 3 cut(s) 93, 138, 150
PdiI GCCGGC 1 cut(s) 582
PdmI GAANNNNTTC 2 cut(s) 827, 1383
PfeI GAWTC 5 cut(s) 285, 601, 994, 1609, 2632
PflFI GACNNNGTC 1 cut(s) 1219
PflMI CCANNNNNTGG 2 cut(s) 1709, 2540
PfoI TCCNGGA 2 cut(s) 291, 702
PkrI GCNGC 7 cut(s) 199, 480, 591, 658, 981, 1021, 1293
Ple19I CGATCG 2 cut(s) 141, 977
PleI GAGTC 4 cut(s) 374, 1402, 1504, 2416
PluTI GGCGCC 1 cut(s) 348
PpsI GAGTC 4 cut(s) 374, 1402, 1504, 2416
PpuMI RGGWCCY 1 cut(s) 882
Psp1406I AACGTT 2 cut(s) 1748, 2408
Psp5II RGGWCCY 1 cut(s) 882
Psp6I CCWGG 4 cut(s) 291, 395, 702, 967
PspGI CCWGG 4 cut(s) 291, 395, 702, 967
PspPI GGNCC 5 cut(s) 595, 882, 1033, 2359, 2579
PspPPI RGGWCCY 1 cut(s) 882
PstNI CAGNNNCTG 1 cut(s) 619
PsuI RGATCY 2 cut(s) 162, 351
PsyI GACNNNGTC 1 cut(s) 1219
PvuI CGATCG 2 cut(s) 141, 977
RsaI GTAC 9 cut(s) 152, 1108, 1590, 1919, 1933, 2008, 2037, 2515, 2602
RsaNI GTAC 9 cut(s) 151, 1107, 1589, 1918, 1932, 2007, 2036, 2514, 2601
RseI CAYNNNNRTG 1 cut(s) 2486
SapI GCTCTTC 1 cut(s) 828
SaqAI TTAA 4 cut(s) 14, 357, 641, 1005
SatI GCNGC 7 cut(s) 198, 479, 590, 657, 980, 1020, 1292
Sau96I GGNCC 5 cut(s) 595, 882, 1033, 2359, 2579
ScaI AGTACT 1 cut(s) 2515
SchI GAGTC 4 cut(s) 374, 1403, 1505, 2416
ScrFI CCNGG 6 cut(s) 293, 397, 704, 969, 1031, 1511
SduI GDGCHC 2 cut(s) 1062, 2293
SfaNI GCATC 4 cut(s) 237, 576, 1082, 2659
SfoI GGCGCC 1 cut(s) 346
SfuI TTCGAA 1 cut(s) 831
SinI GGWCC 4 cut(s) 595, 882, 1033, 2579
SmiMI CAYNNNNRTG 1 cut(s) 2486
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
SphI GCATGC 1 cut(s) 810
SspDI GGCGCC 1 cut(s) 344
SspMI CTAG 4 cut(s) 59, 1155, 1646, 2385
StyD4I CCNGG 6 cut(s) 291, 395, 702, 967, 1029, 1509
StyI CCWWGG 4 cut(s) 63, 1062, 1955, 2534
TaaI ACNGT 6 cut(s) 671, 1738, 1763, 2032, 2644, 2664
TaiI ACGT 8 cut(s) 132, 156, 343, 1112, 1673, 1751, 1919, 2411
TatI WGTACW 4 cut(s) 1588, 1931, 2513, 2600
TauI GCSGC 6 cut(s) 200, 481, 659, 982, 1022, 1294
TfiI GAWTC 5 cut(s) 285, 601, 994, 1609, 2632
Tru1I TTAA 4 cut(s) 14, 357, 641, 1005
Tru9I TTAA 4 cut(s) 14, 357, 641, 1005
TscAI CASTG 5 cut(s) 39, 1743, 2037, 2090, 2669
TseFI GTSAC 5 cut(s) 100, 1233, 1950, 2106, 2593
TseI GCWGC 1 cut(s) 589
Tsp45I GTSAC 5 cut(s) 100, 1233, 1950, 2106, 2593
TspGWI ACGGA 1 cut(s) 146
TspRI CASTG 5 cut(s) 39, 1743, 2037, 2090, 2669
Tth111I GACNNNGTC 1 cut(s) 1219
Van91I CCANNNNNTGG 2 cut(s) 1709, 2540
VneI GTGCAC 1 cut(s) 2289
VpaK11BI GGWCC 4 cut(s) 595, 882, 1033, 2579
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 7 cut(s) 909, 1247, 1534, 1651, 2212, 2336, 2380
XbaI TCTAGA 1 cut(s) 2384
XceI RCATGY 1 cut(s) 810
XcmI CCANNNNNNNNNTGG 1 cut(s) 1513
XmnI GAANNNNTTC 2 cut(s) 827, 1383
XspI CTAG 4 cut(s) 59, 1155, 1646, 2385
ZraI GACGTC 1 cut(s) 130
ZrmI AGTACT 1 cut(s) 2515
Zsp2I ATGCAT 2 cut(s) 808, 1555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.