Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0007712

Physical Location & Seq

Genomic Coordinates Reverse (-)

9014579 .. 9018082

Gene Structure 3504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1117400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGCGTCACCGACTATTCTCTTCCTCCTCATAGCTTTCTTCTTCCTCGCACCGCCGCCCCACCTGCAAGTTCAAGCCGCTGACCAAGCCTTCACGTCTGTCGTCATCTCCCAAAAGGGTCTCGATTTTCTCAAGGACTTGCTCGTAACTCAGGCCGTTTCCTCCATAATTCCACTCCAGCTCCCCAAGATTTCGAAATCCAAGAGAATCCCGTTTCTCGGAAACGTTAATATGGTGCTCTCCAACATCACAATCTACGGAATCGATGTGGGTCCGTCGCATTTCGTGCTGGGAGACGACGGAATCGCCATTATTGCTTCGGGGGTCACCTGCAATCTAAGCATGAATTGGCACTATTCCTACAGTACTTGGATTGCTCCCGTTGTTGTTTCGGATGAAGGTCGTGCCTCGATTCAGGTTGAAGGCTTGGAGGTTGGGCTCTCATTAGGCTTGGGGATCGAGGAGGGAACTTTGAAGCTTACCCTTAAGGATTGTGGTTGTTATGTTAAAGAGATATCCATAAAATTGGATGGAGGAGCCTCTTGGCTTTATCAAGGGATGATTGATGCATTTGAAGAGCAAATAGGATCTGCAGTGGAAACTTCTATGACCAAGGAACTCAAAGATGGCGTTTTAAAGCTCGATTCTTTTATGCAAGCTCTTCCAAAGGAGGTGCCGTTGGATGATAATACTGCTTTGAACATGACTTTTGTGAATGATCCAGTATTGAGCAATTCTTCCATAGGGTTTGAGATTAATGGTTTATTTGGAAGAAGAAATGCTTCAGTCTCTGAGTACCACAATAAGCATTCACTTTCTGAGTACCACAATAAGGATTCACAACCATTAGTTTCCTGCTCAGATCCATCTAAAATGCTCGGAATTTCACTGGATGAGGCAGTGTTCAACTCTGTAGCAGGTGCCTATTTTAATGCAGAATTTATGCAATGGATTGTAGATAAAATACCAGATCAGTCTTTTTTGAACACTGCCGGATGGAGATTTATTATTCCCCAACTATACAAGAAATACCCCAACCATGATATGGACTTGAACATATCATTATATTCTCCTCCAGTCGTGAGGATTTCAGAGCATAATATTGATGCTACCATTTACTCGGACCTGATAATCGATGTATTGGAAGAAGACAGAGTAATACCGGTTGCATGCATCTCATTGGTCATTCGTGGATCCGGTTCAGTAAAAATCTCAGGCAATAACCTGGCTGGCAGCGTGAAATTGAACGACTTTTCAATGTCGTTGAAGTGGAGCAATATTGGAAATCTTCGGTTGTATCTAGTACAGCCAGTAATGTGGACAATTATTCAGACTGTTTTCTTGCCATATGTGAACTCGCATCTCGGAAAGGGATTCCCTTTACCAATCGTTCACGGCTTCACCCTTCAAAACGCTGAATTAGTCTGCTCGAGTTCAAGAGTCATGGTCTGCAGCGATGTAATATATGAGGCATCACATTCACACAATCTTAATTGGCTTCTGCACAGCTTTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001530 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0008150 GO:0008152 GO:0008289 GO:0009058 GO:0009987 GO:0010468 GO:0016020 GO:0019222 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0060255 GO:0065007 GO:0072593 GO:0097367 GO:0098588 GO:0098805 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04064 ko04620 ko05132 ko05152 map04064 map04620 map05132 map05152

Pfam Domains

Protein Families

LBP_BPI_CETP LBP_BPI_CETP_C

Protein Analysis

506

Amino Acids

55.57

Weight (kDa)

5.21

Isoelectric Point (pI)

36.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LBP_BPI_CETP	PF01273	40 - 209	1.2e-20	LBP / BPI / CETP family, N-terminal domain
LBP_BPI_CETP_C	PF02886	287 - 487	9.9e-28	LBP / BPI / CETP family, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04970 AT1G04970 AT1G04970
fragaria_vesca	FvH4_6g41770 FvH4_6g41770 FvH4_6g41770
malus_domestica	MD09G1117400.v1.1
prunus_persica	Prupe.3G206400_v2.0.a1
pyrus_communis	pycom09g04250 pycom16g16220
rosa_chinensis	RchiOBHm_Chr2g0157551
rosa_laevigata	RLG00000020997
rosa_multiflora	Rmu_co8387293.1_g000001 Rmu_sc0000195.1_g000041 Rmu_sc0000861.1_g000014
rosa_roxburghii	Rroxscaffold_2G00092130
rosa_rugosa	Rorug02G0462000 Rorug06G0244900
rosa_samantha	Rh2AG526100 Rh2BG540800 Rh2CG510800 Rh2DG549300 Rh6AG379800
rosa_wichuraiana	Rw2G043580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	72, 338, 908
Acc36I	ACCTGC	3 cut(s)	72, 338, 908
AccB1I	GGYRCC	2 cut(s)	673, 920
AccB7I	CCANNNNNTGG	1 cut(s)	1045
AciI	CCGC	3 cut(s)	53, 56, 78
AclI	AACGTT	1 cut(s)	225
AclWI	GGATC	6 cut(s)	464, 595, 713, 857, 1188, 1201
AcsI	RAATTY	2 cut(s)	882, 938
AcuI	CTGAAG	1 cut(s)	768
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	4 cut(s)	367, 797, 824, 1305
AfiI	CCNNNNNNNGG	3 cut(s)	218, 832, 1045
AflII	CTTAAG	1 cut(s)	485
AgeI	ACCGGT	1 cut(s)	1162
AjiI	CACGTC	1 cut(s)	96
AjnI	CCWGG	1 cut(s)	1224
AluBI	AGCT	6 cut(s)	35, 181, 478, 640, 659, 1509
AluI	AGCT	6 cut(s)	35, 181, 478, 640, 659, 1509
Alw21I	GWGCWC	1 cut(s)	240
Alw26I	GTCTC	3 cut(s)	125, 288, 793
AlwI	GGATC	6 cut(s)	464, 595, 713, 857, 1188, 1201
AlwNI	CAGNNNCTG	1 cut(s)	791
Ama87I	CYCGRG	1 cut(s)	1429
AoxI	GGCC	1 cut(s)	153
ApeKI	GCWGC	2 cut(s)	1233, 1452
ApoI	RAATTY	2 cut(s)	882, 938
AseI	ATTAAT	1 cut(s)	756
AsiGI	ACCGGT	1 cut(s)	1162
Asp700I	GAANNNNTTC	1 cut(s)	781
AspS9I	GGNCC	2 cut(s)	272, 1123
AsuHPI	GGTGA	2 cut(s)	319, 1393
AsuII	TTCGAA	1 cut(s)	194
AvaI	CYCGRG	1 cut(s)	1429
AvaII	GGWCC	2 cut(s)	272, 1123
BamHI	GGATCC	1 cut(s)	1193
BanI	GGYRCC	2 cut(s)	673, 920
BanII	GRGCYC	1 cut(s)	441
BbsI	GAAGAC	1 cut(s)	1155
Bbv12I	GWGCWC	1 cut(s)	240
BbvI	GCAGC	2 cut(s)	1245, 1464
BccI	CCATC	4 cut(s)	524, 620, 874, 990
BceAI	ACGGC	3 cut(s)	140, 661, 1411
BciT130I	CCWGG	1 cut(s)	1226
BcoDI	GTCTC	3 cut(s)	125, 288, 793
BfaI	CTAG	1 cut(s)	1301
BfmI	CTRYAG	4 cut(s)	361, 591, 912, 1450
BfrI	CTTAAG	1 cut(s)	485
BfuAI	ACCTGC	3 cut(s)	72, 338, 908
BisI	GCNGC	4 cut(s)	56, 78, 1234, 1453
BlsI	GCNGC	4 cut(s)	57, 79, 1235, 1454
BmcAI	AGTACT	1 cut(s)	367
Bme1390I	CCNGG	1 cut(s)	1226
Bme18I	GGWCC	2 cut(s)	272, 1123
BmeT110I	CYCGRG	1 cut(s)	1429
BmgBI	CACGTC	1 cut(s)	96
BmgT120I	GGNCC	2 cut(s)	272, 1123
BmiI	GGNNCC	5 cut(s)	273, 538, 675, 922, 1195
BmrFI	CCNGG	1 cut(s)	1226
BmsI	GCATC	5 cut(s)	556, 1096, 1182, 1369, 1481
BpiI	GAAGAC	1 cut(s)	1155
BpmI	CTGGAG	2 cut(s)	161, 1059
Bpu14I	TTCGAA	1 cut(s)	194
BpuEI	CTTGAG	1 cut(s)	116
Bsa29I	ATCGAT	2 cut(s)	264, 1134
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	125
BsaJI	CCNNGG	1 cut(s)	612
BsaWI	WCCGGW	2 cut(s)	1162, 1196
BsaXI	ACNNNNNCTCC	4 cut(s)	165, 195, 662, 692
Bsc4I	CCNNNNNNNGG	3 cut(s)	218, 832, 1045
Bse118I	RCCGGY	1 cut(s)	1162
Bse1I	ACTGG	4 cut(s)	722, 894, 1076, 1310
Bse3DI	GCAATG	1 cut(s)	953
BseBI	CCWGG	1 cut(s)	1226
BseCI	ATCGAT	2 cut(s)	264, 1134
BseDI	CCNNGG	1 cut(s)	612
BseGI	GGATG	6 cut(s)	400, 535, 564, 688, 898, 1001
BseLI	CCNNNNNNNGG	3 cut(s)	218, 832, 1045
BseMI	GCAATG	1 cut(s)	953
BseMII	CTCAG	5 cut(s)	164, 783, 810, 873, 1227
BseNI	ACTGG	4 cut(s)	722, 894, 1076, 1310
BseRI	GAGGAG	4 cut(s)	17, 476, 549, 1062
BseXI	GCAGC	2 cut(s)	1245, 1464
BseYI	CCCAGC	1 cut(s)	289
BsgI	GTGCAG	1 cut(s)	1487
BshFI	GGCC	1 cut(s)	155
BshNI	GGYRCC	2 cut(s)	673, 920
BshTI	ACCGGT	1 cut(s)	1162
BshVI	ATCGAT	2 cut(s)	264, 1134
BsiHKAI	GWGCWC	1 cut(s)	240
BsiHKCI	CYCGRG	1 cut(s)	1429
BsiSI	CCGG	3 cut(s)	993, 1163, 1197
BslI	CCNNNNNNNGG	3 cut(s)	218, 832, 1045
BsmAI	GTCTC	3 cut(s)	125, 288, 793
BsmBI	CGTCTC	1 cut(s)	288
BsmI	GAATGC	1 cut(s)	808
BsnI	GGCC	1 cut(s)	155
Bso31I	GGTCTC	1 cut(s)	125
BsoBI	CYCGRG	1 cut(s)	1429
Bsp119I	TTCGAA	1 cut(s)	194
Bsp1286I	GDGCHC	2 cut(s)	240, 441
Bsp143I	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
BspACI	CCGC	3 cut(s)	53, 56, 78
BspANI	GGCC	1 cut(s)	155
BspCNI	CTCAG	5 cut(s)	163, 784, 811, 872, 1226
BspDI	ATCGAT	2 cut(s)	264, 1134
BspLI	GGNNCC	5 cut(s)	273, 538, 675, 922, 1195
BspMAI	CTGCAG	2 cut(s)	595, 1454
BspMI	ACCTGC	3 cut(s)	72, 338, 908
BspPI	GGATC	6 cut(s)	464, 595, 713, 857, 1188, 1201
BspQI	GCTCTTC	2 cut(s)	570, 666
BspT104I	TTCGAA	1 cut(s)	194
BspT107I	GGYRCC	2 cut(s)	673, 920
BspTI	CTTAAG	1 cut(s)	485
BspTNI	GGTCTC	1 cut(s)	125
BsrDI	GCAATG	1 cut(s)	953
BsrFI	RCCGGY	1 cut(s)	1162
BsrI	ACTGG	4 cut(s)	722, 894, 1076, 1310
BssAI	RCCGGY	1 cut(s)	1162
BssECI	CCNNGG	1 cut(s)	612
BssMI	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	612
Bst2UI	CCWGG	1 cut(s)	1226
Bst4CI	ACNGT	2 cut(s)	365, 1336
Bst6I	CTCTTC	3 cut(s)	26, 570, 666
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	1 cut(s)	485
BstAPI	GCANNNNNTGC	1 cut(s)	286
BstBI	TTCGAA	1 cut(s)	194
BstC8I	GCNNGC	3 cut(s)	657, 1171, 1231
BstDEI	CTNAG	6 cut(s)	150, 338, 792, 819, 859, 1213
BstEII	GGTNACC	1 cut(s)	325
BstF5I	GGATG	6 cut(s)	400, 535, 564, 688, 898, 1001
BstKTI	GATC	6 cut(s)	459, 590, 721, 865, 973, 1196
BstMAI	GTCTC	3 cut(s)	125, 288, 793
BstMBI	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
BstMWI	GCNNNNNNNGC	5 cut(s)	64, 86, 286, 314, 339
BstNI	CCWGG	1 cut(s)	1226
BstNSI	RCATGY	1 cut(s)	1173
BstPI	GGTNACC	1 cut(s)	325
BstSCI	CCNGG	1 cut(s)	1224
BstSFI	CTRYAG	4 cut(s)	361, 591, 912, 1450
BstV1I	GCAGC	2 cut(s)	1245, 1464
BstV2I	GAAGAC	1 cut(s)	1155
BstX2I	RGATCY	3 cut(s)	587, 862, 1193
BstXI	CCANNNNNNTGG	2 cut(s)	526, 1317
BstYI	RGATCY	3 cut(s)	587, 862, 1193
Bsu15I	ATCGAT	2 cut(s)	264, 1134
BsuRI	GGCC	1 cut(s)	155
BsuTUI	ATCGAT	2 cut(s)	264, 1134
BtgZI	GCGATG	1 cut(s)	1470
BtrI	CACGTC	1 cut(s)	96
BtsCI	GGATG	6 cut(s)	400, 535, 564, 688, 898, 1001
BtsI	GCAGTG	3 cut(s)	600, 906, 987
BtsIMutI	CAGTG	4 cut(s)	600, 887, 906, 987
BveI	ACCTGC	3 cut(s)	72, 338, 908
Cac8I	GCNNGC	3 cut(s)	657, 1171, 1231
CaiI	CAGNNNCTG	1 cut(s)	791
Cfr10I	RCCGGY	1 cut(s)	1162
Cfr13I	GGNCC	2 cut(s)	272, 1123
ClaI	ATCGAT	2 cut(s)	264, 1134
Csp6I	GTAC	4 cut(s)	366, 796, 823, 1304
CspAI	ACCGGT	1 cut(s)	1162
CviAII	CATG	5 cut(s)	343, 703, 1040, 1170, 1444
CviQI	GTAC	4 cut(s)	366, 796, 823, 1304
DdeI	CTNAG	6 cut(s)	150, 338, 792, 819, 859, 1213
DpnI	GATC	6 cut(s)	458, 589, 720, 864, 972, 1195
DpnII	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
DraI	TTTAAA	1 cut(s)	636
Eam1104I	CTCTTC	3 cut(s)	26, 570, 666
EarI	CTCTTC	3 cut(s)	26, 570, 666
Eco130I	CCWWGG	1 cut(s)	612
Eco24I	GRGCYC	1 cut(s)	441
Eco31I	GGTCTC	1 cut(s)	125
Eco32I	GATATC	1 cut(s)	516
Eco47I	GGWCC	2 cut(s)	272, 1123
Eco57I	CTGAAG	1 cut(s)	768
Eco88I	CYCGRG	1 cut(s)	1429
Eco91I	GGTNACC	1 cut(s)	325
EcoO65I	GGTNACC	1 cut(s)	325
EcoRII	CCWGG	1 cut(s)	1224
EcoRV	GATATC	1 cut(s)	516
EcoT14I	CCWWGG	1 cut(s)	612
EcoT22I	ATGCAT	2 cut(s)	571, 1175
EcoT38I	GRGCYC	1 cut(s)	441
ErhI	CCWWGG	1 cut(s)	612
Esp3I	CGTCTC	1 cut(s)	288
FaeI	CATG	5 cut(s)	346, 706, 1043, 1173, 1447
FalI	AAGNNNNNCTT	2 cut(s)	766, 798
FatI	CATG	5 cut(s)	342, 702, 1039, 1169, 1443
FauNDI	CATATG	1 cut(s)	1348
Fnu4HI	GCNGC	4 cut(s)	56, 78, 1234, 1453
FokI	GGATG	6 cut(s)	407, 542, 571, 695, 905, 1008
FriOI	GRGCYC	1 cut(s)	441
Fsp4HI	GCNGC	4 cut(s)	56, 78, 1234, 1453
FspBI	CTAG	1 cut(s)	1301
GluI	GCNGC	4 cut(s)	56, 78, 1234, 1453
GsaI	CCCAGC	1 cut(s)	293
GsuI	CTGGAG	2 cut(s)	161, 1059
HaeIII	GGCC	1 cut(s)	155
HapII	CCGG	3 cut(s)	993, 1163, 1197
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	5 cut(s)	346, 706, 1043, 1173, 1447
HindIII	AAGCTT	1 cut(s)	476
HinfI	GANTC	8 cut(s)	207, 261, 303, 412, 644, 836, 1374, 1440
HpaII	CCGG	3 cut(s)	993, 1163, 1197
HphI	GGTGA	2 cut(s)	319, 1393
Hpy166II	GTNNAC	3 cut(s)	1320, 1354, 1393
Hpy188III	TCNNGA	3 cut(s)	122, 1081, 1437
Hpy8I	GTNNAC	3 cut(s)	1320, 1354, 1393
Hpy99I	CGWCG	2 cut(s)	280, 302
HpyAV	CCTTC	4 cut(s)	100, 392, 416, 1415
HpyCH4III	ACNGT	2 cut(s)	365, 1336
HpyCH4IV	ACGT	2 cut(s)	95, 225
HpyF10VI	GCNNNNNNNGC	5 cut(s)	64, 86, 286, 314, 339
HpyF3I	CTNAG	6 cut(s)	150, 338, 792, 819, 859, 1213
HpySE526I	ACGT	2 cut(s)	95, 225
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	5 cut(s)	346, 706, 1043, 1173, 1447
Kzo9I	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
LguI	GCTCTTC	2 cut(s)	570, 666
LmnI	GCTCC	4 cut(s)	186, 382, 536, 1272
Lsp1109I	GCAGC	2 cut(s)	1245, 1464
LweI	GCATC	5 cut(s)	556, 1096, 1182, 1369, 1481
MaeI	CTAG	1 cut(s)	1301
MaeII	ACGT	2 cut(s)	95, 225
MaeIII	GTNAC	3 cut(s)	6, 145, 325
MalI	GATC	6 cut(s)	458, 589, 720, 864, 972, 1195
MboI	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
MflI	RGATCY	3 cut(s)	587, 862, 1193
MhlI	GDGCHC	2 cut(s)	240, 441
MlyI	GAGTC	1 cut(s)	1449
MmeI	TCCRAC	2 cut(s)	267, 660
Mph1103I	ATGCAT	2 cut(s)	571, 1175
MroXI	GAANNNNTTC	1 cut(s)	781
MseI	TTAA	7 cut(s)	228, 486, 507, 635, 756, 930, 1491
MspA1I	CMGCKG	1 cut(s)	80
MspCI	CTTAAG	1 cut(s)	485
MspI	CCGG	3 cut(s)	993, 1163, 1197
MspR9I	CCNGG	1 cut(s)	1226
Mva1269I	GAATGC	1 cut(s)	808
MvaI	CCWGG	1 cut(s)	1226
MwoI	GCNNNNNNNGC	5 cut(s)	64, 86, 286, 314, 339
NdeI	CATATG	1 cut(s)	1348
NdeII	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
NlaIII	CATG	5 cut(s)	346, 706, 1043, 1173, 1447
NlaIV	GGNNCC	5 cut(s)	273, 538, 675, 922, 1195
NmuCI	GTSAC	2 cut(s)	6, 325
NsiI	ATGCAT	2 cut(s)	571, 1175
NspI	RCATGY	1 cut(s)	1173
NspV	TTCGAA	1 cut(s)	194
PaeI	GCATGC	1 cut(s)	1173
PaeR7I	CTCGAG	1 cut(s)	1429
PaqCI	CACCTGC	3 cut(s)	72, 338, 908
PciSI	GCTCTTC	2 cut(s)	570, 666
PctI	GAATGC	1 cut(s)	808
PdmI	GAANNNNTTC	1 cut(s)	781
PfeI	GAWTC	7 cut(s)	207, 261, 303, 412, 644, 836, 1374
PflMI	CCANNNNNTGG	1 cut(s)	1045
PinAI	ACCGGT	1 cut(s)	1162
PkrI	GCNGC	4 cut(s)	57, 79, 1235, 1454
PleI	GAGTC	1 cut(s)	1448
PpsI	GAGTC	1 cut(s)	1448
PshBI	ATTAAT	1 cut(s)	756
Psp1406I	AACGTT	1 cut(s)	225
Psp6I	CCWGG	1 cut(s)	1224
PspEI	GGTNACC	1 cut(s)	325
PspFI	CCCAGC	1 cut(s)	289
PspGI	CCWGG	1 cut(s)	1224
PspN4I	GGNNCC	5 cut(s)	273, 538, 675, 922, 1195
PspPI	GGNCC	2 cut(s)	272, 1123
PspXI	VCTCGAGB	1 cut(s)	1429
PstI	CTGCAG	2 cut(s)	595, 1454
PstNI	CAGNNNCTG	1 cut(s)	791
PsuI	RGATCY	3 cut(s)	587, 862, 1193
RsaI	GTAC	4 cut(s)	367, 797, 824, 1305
RsaNI	GTAC	4 cut(s)	366, 796, 823, 1304
SapI	GCTCTTC	2 cut(s)	570, 666
SaqAI	TTAA	7 cut(s)	228, 486, 507, 635, 756, 930, 1491
SatI	GCNGC	4 cut(s)	56, 78, 1234, 1453
Sau3AI	GATC	6 cut(s)	456, 587, 718, 862, 970, 1193
Sau96I	GGNCC	2 cut(s)	272, 1123
ScaI	AGTACT	1 cut(s)	367
SchI	GAGTC	1 cut(s)	1449
ScrFI	CCNGG	1 cut(s)	1226
SduI	GDGCHC	2 cut(s)	240, 441
SfaNI	GCATC	5 cut(s)	556, 1096, 1182, 1369, 1481
SfcI	CTRYAG	4 cut(s)	361, 591, 912, 1450
Sfr274I	CTCGAG	1 cut(s)	1429
SfuI	TTCGAA	1 cut(s)	194
SinI	GGWCC	2 cut(s)	272, 1123
SlaI	CTCGAG	1 cut(s)	1429
SmlI	CTYRAG	3 cut(s)	131, 485, 1429
SmoI	CTYRAG	3 cut(s)	131, 485, 1429
SphI	GCATGC	1 cut(s)	1173
SsiI	CCGC	3 cut(s)	53, 56, 78
SspI	AATATT	2 cut(s)	1102, 1279
SspMI	CTAG	1 cut(s)	1301
StyD4I	CCNGG	1 cut(s)	1224
StyI	CCWWGG	1 cut(s)	612
TaaI	ACNGT	2 cut(s)	365, 1336
TaiI	ACGT	2 cut(s)	98, 228
TaqI	TCGA	8 cut(s)	123, 194, 264, 410, 459, 642, 1134, 1430
TatI	WGTACW	2 cut(s)	365, 1303
TauI	GCSGC	2 cut(s)	58, 80
TfiI	GAWTC	7 cut(s)	207, 261, 303, 412, 644, 836, 1374
Tru1I	TTAA	7 cut(s)	228, 486, 507, 635, 756, 930, 1491
Tru9I	TTAA	7 cut(s)	228, 486, 507, 635, 756, 930, 1491
TscAI	CASTG	4 cut(s)	600, 894, 906, 994
TseFI	GTSAC	2 cut(s)	6, 325
TseI	GCWGC	2 cut(s)	1233, 1452
Tsp45I	GTSAC	2 cut(s)	6, 325
TspDTI	ATGAA	2 cut(s)	359, 411
TspGWI	ACGGA	3 cut(s)	264, 273, 315
TspRI	CASTG	4 cut(s)	600, 894, 906, 994
Van91I	CCANNNNNTGG	1 cut(s)	1045
Vha464I	CTTAAG	1 cut(s)	485
VpaK11BI	GGWCC	2 cut(s)	272, 1123
VspI	ATTAAT	1 cut(s)	756
XapI	RAATTY	2 cut(s)	882, 938
XceI	RCATGY	1 cut(s)	1173
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1042
XhoI	CTCGAG	1 cut(s)	1429
XmnI	GAANNNNTTC	1 cut(s)	781
XspI	CTAG	1 cut(s)	1301
ZrmI	AGTACT	1 cut(s)	367
Zsp2I	ATGCAT	2 cut(s)	571, 1175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.