Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0007712

Physical Location & Seq

Genomic Coordinates Reverse (-)

3098578 .. 3102914

Gene Structure 4337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g04250.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGACCCACAGGCCACAAACAAAACCAGAAACTATGGGGTTAAAGTTTGCGCCCTTTTCCACGTTTCTCCTTGCGCCATAGCCAAAACAAGAAGAAAAAAATTTCTCTCCTCTTCTCCGGAGACTTCAATGGCGCCACCGACTATTCTCTTCCTCCTCATAGCTTCCTTTTTCCTCGCACCGCCGCCCCACCTGCAAGTTCAAGCCGCTGACCAAGCCTTCACGTCTGTCGTCATCTCCCAAAAGGGTCTCGATTTTCTCAAGGACTTGCTGGTAACTCAGGCTGTTTCCTCCATAATTCCACTCCAGCTCCCCAAGATTTCGAAATCCAAGAGAATCCCGTTTCTGGGAAACGTTAATATGGTGCTCTCCAACATCACAATCTACGGAATCGATGTGGGTCCGTCGCATTTCGTGCTGGGAGACGACGGAATCGCCATTATTGCTTCGGGGGTCACCTGCAATCTGAGCATGAATTGGCACTATTCCTACAGTACTTGGATTGCTCCCGTTGTTGTTTCGGATGAAGGTCGTGCCTCGATTCAGGTTGAAGGCTTGGAAGTTGGGCTCTCATTAGGCTTGGGGATCGAGGAGGGAACTTTGAAGCTTACCCTTAAGGATTGTGGTTGTTACGTTAAAGAGATATCCATAAAATTGGATGGAGGAGCCTCTTGGCTTTATCAAGGGATGATTGATGCATTTGAAGAGCAAATAGGATCTGCAGTGGAAACTTCTATGACCAAGGAACTCAAAGATGGCGTTTTAAAGCTCGATTCTTTTATGCAAGCTCTTCCAAAGGAGGTGCCGTTGGATGATAATACTGCTTTGAATATGACTTTTGTGAATGATCCGGTATTGAGCAATTCTTCCATAGGGTTTGAGATTAATGGTTTATTTGGAAGAAGAAATGCTTCAGTCTCTGAGTACCACAATAAGGATTCACTTTCTGAGTACCGCAATAAGGATGCACAACCCTTAGTTTCCTGCTCAGATCCATCTAAAATGCTCGGAATTTCACTGGATGAGGCAGTGTTCAACTCTGTAGCAGCTGCCTATTTTAATGCAGAATTTATGCAATGGATTGTAGATAAAATACCAGATCAGTCTTTTTTGAACACTGCTGGATGGAGATTTATTATTCCCCAACTATACAAGAAATACCCGAACCATGATATGGACTTGAACATATCCTTATATTCTCCTCCAGTCGTAAGGATTTCAGATCATAATATTGATGCTACCATTTACTCGGACCTGATAATCGATGTATTGGAAGAAGACAGAGTAATACCAGTTGCATGCATCTCATTGGTCATTCGTGGATCCGGTTCAGTAAAAATCTCAGGCAATAACCTGGCTGGAAGCGTGAAATTGAACGACTTTTCAATGTCGTTGAAGTGGAGCAATATTGGAAATCTTCGGTTGTATCTAGTACAGCCAGTAATGTGGACAATTATCCAGACTGTTTTCTTGCCATACGTGAACTCGCATCTCGTAAAGGGATTCCCTTTACCAATCGTTCACGGCTTCACCCTTCAAAACGCTGAACTAGTCTGCTCGAGTTCAAGAGTCATGGTCTGCAGCGATGTAATATATGAGGCATCACATTCACGCAATCTTAATTGGCTTCTGCACAGCATTGTCCATTTCTTAATTTGTGGTATGTTTGCAAAAAGGTGCCATCCGAAGGAAGGAGTCCCTCATCTCGGAATCTTCCGCGTAACACATGACGTTAATGACAAATGCTCGATGGAAATGCACGAAGCAAAGATGACGAGATCGGAGTTTTCCAAATCCACAGTTTTGAGGGACAACTTTTCAAGAGCTGCTTGTCGTTCTCACGGATTTGACCCACATTACCTTTCCCAAATCTTGATGAACTTTCTTGGCTTTTTGTCGAGTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001530 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0008150 GO:0008152 GO:0008289 GO:0009058 GO:0009987 GO:0010468 GO:0016020 GO:0019222 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0060255 GO:0065007 GO:0072593 GO:0097367 GO:0098588 GO:0098805 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04064 ko04620 ko05132 ko05152 map04064 map04620 map05132 map05152

Pfam Domains

Protein Families

LBP_BPI_CETP LBP_BPI_CETP_C

Protein Analysis

636

Amino Acids

70.25

Weight (kDa)

6.32

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04970 AT1G04970 AT1G04970
fragaria_vesca	FvH4_6g41770 FvH4_6g41770 FvH4_6g41770
malus_domestica	MD09G1117400.v1.1
prunus_persica	Prupe.3G206400_v2.0.a1
pyrus_communis	pycom09g04250 pycom16g16220
rosa_chinensis	RchiOBHm_Chr2g0157551
rosa_laevigata	RLG00000020997
rosa_multiflora	Rmu_co8387293.1_g000001 Rmu_sc0000195.1_g000041 Rmu_sc0000861.1_g000014
rosa_roxburghii	Rroxscaffold_2G00092130
rosa_rugosa	Rorug02G0462000 Rorug06G0244900
rosa_samantha	Rh2AG526100 Rh2BG540800 Rh2CG510800 Rh2DG549300 Rh6AG379800
rosa_wichuraiana	Rw2G043580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	201, 467
Acc36I	ACCTGC	2 cut(s)	201, 467
AccB1I	GGYRCC	3 cut(s)	133, 802, 1677
AccB7I	CCANNNNNTGG	1 cut(s)	1174
AccII	CGCG	1 cut(s)	1719
AccIII	TCCGGA	1 cut(s)	118
AciI	CCGC	5 cut(s)	182, 185, 207, 955, 1717
AclI	AACGTT	1 cut(s)	354
AclWI	GGATC	6 cut(s)	593, 724, 842, 986, 1317, 1330
AcsI	RAATTY	3 cut(s)	101, 1011, 1067
AcuI	CTGAAG	1 cut(s)	897
AcyI	GRCGYC	1 cut(s)	134
AfaI	GTAC	4 cut(s)	496, 926, 953, 1434
AfiI	CCNNNNNNNGG	8 cut(s)	346, 347, 934, 961, 1174, 1687, 1691, 1706
AflII	CTTAAG	1 cut(s)	614
AhlI	ACTAGT	1 cut(s)	1549
AjiI	CACGTC	1 cut(s)	225
AjnI	CCWGG	1 cut(s)	1353
AluBI	AGCT	7 cut(s)	164, 310, 607, 769, 788, 1049, 1826
AluI	AGCT	7 cut(s)	164, 310, 607, 769, 788, 1049, 1826
Alw21I	GWGCWC	1 cut(s)	369
Alw26I	GTCTC	4 cut(s)	116, 254, 417, 922
AlwI	GGATC	6 cut(s)	593, 724, 842, 986, 1317, 1330
AlwNI	CAGNNNCTG	1 cut(s)	920
Ama87I	CYCGRG	1 cut(s)	1558
Aor13HI	TCCGGA	1 cut(s)	118
AoxI	GGCC	1 cut(s)	12
ApeKI	GCWGC	4 cut(s)	1046, 1049, 1581, 1826
ApoI	RAATTY	3 cut(s)	101, 1011, 1067
AseI	ATTAAT	1 cut(s)	885
Asp700I	GAANNNNTTC	1 cut(s)	910
AspLEI	GCGC	3 cut(s)	53, 77, 136
AspS9I	GGNCC	3 cut(s)	4, 401, 1252
AsuHPI	GGTGA	2 cut(s)	448, 1522
AsuII	TTCGAA	1 cut(s)	323
AvaI	CYCGRG	1 cut(s)	1558
AvaII	GGWCC	3 cut(s)	4, 401, 1252
BamHI	GGATCC	1 cut(s)	1322
BanI	GGYRCC	3 cut(s)	133, 802, 1677
BanII	GRGCYC	1 cut(s)	570
BbsI	GAAGAC	1 cut(s)	1284
Bbv12I	GWGCWC	1 cut(s)	369
BbvI	GCAGC	4 cut(s)	1036, 1058, 1593, 1813
BccI	CCATC	6 cut(s)	653, 749, 1003, 1119, 1689, 1744
BceAI	ACGGC	2 cut(s)	790, 1540
BcgI	CGANNNNNNTGC	2 cut(s)	1738, 1772
BciT130I	CCWGG	1 cut(s)	1355
BcoDI	GTCTC	4 cut(s)	116, 254, 417, 922
BcuI	ACTAGT	1 cut(s)	1549
BfaI	CTAG	2 cut(s)	1430, 1550
BfmI	CTRYAG	4 cut(s)	490, 720, 1041, 1579
BfoI	RGCGCY	1 cut(s)	137
BfrI	CTTAAG	1 cut(s)	614
BfuAI	ACCTGC	2 cut(s)	201, 467
BisI	GCNGC	6 cut(s)	185, 207, 1047, 1050, 1582, 1827
BlsI	GCNGC	6 cut(s)	186, 208, 1048, 1051, 1583, 1828
BmcAI	AGTACT	1 cut(s)	496
Bme1390I	CCNGG	1 cut(s)	1355
Bme18I	GGWCC	3 cut(s)	4, 401, 1252
BmeT110I	CYCGRG	1 cut(s)	1558
BmgBI	CACGTC	1 cut(s)	225
BmgT120I	GGNCC	3 cut(s)	4, 401, 1252
BmiI	GGNNCC	7 cut(s)	6, 135, 402, 667, 804, 1324, 1679
BmrFI	CCNGG	1 cut(s)	1355
BmsI	GCATC	6 cut(s)	685, 955, 1225, 1311, 1498, 1610
BpiI	GAAGAC	1 cut(s)	1284
BpmI	CTGGAG	2 cut(s)	290, 1188
Bpu14I	TTCGAA	1 cut(s)	323
BpuEI	CTTGAG	1 cut(s)	245
Bsa29I	ATCGAT	2 cut(s)	393, 1263
BsaAI	YACGTR	1 cut(s)	1480
BsaHI	GRCGYC	1 cut(s)	134
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	1 cut(s)	741
BsaWI	WCCGGW	3 cut(s)	118, 850, 1325
BsaXI	ACNNNNNCTCC	4 cut(s)	294, 324, 791, 821
Bsc4I	CCNNNNNNNGG	8 cut(s)	346, 347, 934, 961, 1174, 1687, 1691, 1706
Bse1I	ACTGG	4 cut(s)	1023, 1205, 1292, 1439
Bse3DI	GCAATG	1 cut(s)	1082
BseAI	TCCGGA	1 cut(s)	118
BseBI	CCWGG	1 cut(s)	1355
BseCI	ATCGAT	2 cut(s)	393, 1263
BseDI	CCNNGG	1 cut(s)	741
BseGI	GGATG	8 cut(s)	529, 664, 693, 817, 970, 1027, 1130, 1681
BseLI	CCNNNNNNNGG	8 cut(s)	346, 347, 934, 961, 1174, 1687, 1691, 1706
BseMI	GCAATG	1 cut(s)	1082
BseMII	CTCAG	6 cut(s)	293, 458, 912, 939, 1002, 1356
BseNI	ACTGG	4 cut(s)	1023, 1205, 1292, 1439
BseRI	GAGGAG	5 cut(s)	100, 146, 605, 678, 1191
BseXI	GCAGC	4 cut(s)	1036, 1058, 1593, 1813
BseYI	CCCAGC	1 cut(s)	418
BsgI	GTGCAG	1 cut(s)	1616
Bsh1236I	CGCG	1 cut(s)	1719
BshFI	GGCC	1 cut(s)	14
BshNI	GGYRCC	3 cut(s)	133, 802, 1677
BshVI	ATCGAT	2 cut(s)	393, 1263
BsiHKAI	GWGCWC	1 cut(s)	369
BsiHKCI	CYCGRG	1 cut(s)	1558
BsiSI	CCGG	3 cut(s)	119, 851, 1326
BslFI	GGGAC	2 cut(s)	1682, 1823
BslI	CCNNNNNNNGG	8 cut(s)	346, 347, 934, 961, 1174, 1687, 1691, 1706
BsmAI	GTCTC	4 cut(s)	116, 254, 417, 922
BsmBI	CGTCTC	1 cut(s)	417
BsmFI	GGGAC	2 cut(s)	1682, 1823
BsnI	GGCC	1 cut(s)	14
Bso31I	GGTCTC	1 cut(s)	254
BsoBI	CYCGRG	1 cut(s)	1558
Bsp119I	TTCGAA	1 cut(s)	323
Bsp1286I	GDGCHC	2 cut(s)	369, 570
Bsp13I	TCCGGA	1 cut(s)	118
Bsp143I	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
BspACI	CCGC	5 cut(s)	182, 185, 207, 955, 1717
BspANI	GGCC	1 cut(s)	14
BspCNI	CTCAG	6 cut(s)	292, 459, 913, 940, 1001, 1355
BspDI	ATCGAT	2 cut(s)	393, 1263
BspEI	TCCGGA	1 cut(s)	118
BspFNI	CGCG	1 cut(s)	1719
BspLI	GGNNCC	7 cut(s)	6, 135, 402, 667, 804, 1324, 1679
BspMAI	CTGCAG	2 cut(s)	724, 1583
BspMI	ACCTGC	2 cut(s)	201, 467
BspPI	GGATC	6 cut(s)	593, 724, 842, 986, 1317, 1330
BspQI	GCTCTTC	2 cut(s)	699, 795
BspT104I	TTCGAA	1 cut(s)	323
BspT107I	GGYRCC	3 cut(s)	133, 802, 1677
BspTI	CTTAAG	1 cut(s)	614
BspTNI	GGTCTC	1 cut(s)	254
BsrDI	GCAATG	1 cut(s)	1082
BsrI	ACTGG	4 cut(s)	1023, 1205, 1292, 1439
BssECI	CCNNGG	1 cut(s)	741
BssMI	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
BssNI	GRCGYC	1 cut(s)	134
BssT1I	CCWWGG	1 cut(s)	741
Bst2UI	CCWGG	1 cut(s)	1355
Bst4CI	ACNGT	3 cut(s)	494, 1465, 1801
Bst6I	CTCTTC	4 cut(s)	118, 155, 699, 795
BstACI	GRCGYC	1 cut(s)	134
BstAFI	CTTAAG	1 cut(s)	614
BstAPI	GCANNNNNTGC	1 cut(s)	415
BstBAI	YACGTR	1 cut(s)	1480
BstBI	TTCGAA	1 cut(s)	323
BstC8I	GCNNGC	2 cut(s)	786, 1300
BstDEI	CTNAG	7 cut(s)	279, 467, 921, 948, 976, 988, 1342
BstEII	GGTNACC	1 cut(s)	454
BstF5I	GGATG	8 cut(s)	529, 664, 693, 817, 970, 1027, 1130, 1681
BstFNI	CGCG	1 cut(s)	1719
BstH2I	RGCGCY	1 cut(s)	137
BstHHI	GCGC	3 cut(s)	53, 77, 136
BstKTI	GATC	8 cut(s)	588, 719, 850, 994, 1102, 1225, 1325, 1781
BstMAI	GTCTC	4 cut(s)	116, 254, 417, 922
BstMBI	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
BstMWI	GCNNNNNNNGC	5 cut(s)	193, 215, 415, 443, 468
BstNI	CCWGG	1 cut(s)	1355
BstNSI	RCATGY	1 cut(s)	1302
BstPI	GGTNACC	1 cut(s)	454
BstSCI	CCNGG	1 cut(s)	1353
BstSFI	CTRYAG	4 cut(s)	490, 720, 1041, 1579
BstUI	CGCG	1 cut(s)	1719
BstV1I	GCAGC	4 cut(s)	1036, 1058, 1593, 1813
BstV2I	GAAGAC	1 cut(s)	1284
BstX2I	RGATCY	3 cut(s)	716, 991, 1322
BstXI	CCANNNNNNTGG	2 cut(s)	655, 1446
BstYI	RGATCY	3 cut(s)	716, 991, 1322
Bsu15I	ATCGAT	2 cut(s)	393, 1263
BsuRI	GGCC	1 cut(s)	14
BsuTUI	ATCGAT	2 cut(s)	393, 1263
BtgZI	GCGATG	1 cut(s)	1599
BtrI	CACGTC	1 cut(s)	225
BtsCI	GGATG	8 cut(s)	529, 664, 693, 817, 970, 1027, 1130, 1681
BtsI	GCAGTG	3 cut(s)	729, 1035, 1116
BtsIMutI	CAGTG	4 cut(s)	729, 1016, 1035, 1116
BveI	ACCTGC	2 cut(s)	201, 467
Cac8I	GCNNGC	2 cut(s)	786, 1300
CaiI	CAGNNNCTG	1 cut(s)	920
CfoI	GCGC	3 cut(s)	53, 77, 136
Cfr13I	GGNCC	3 cut(s)	4, 401, 1252
ClaI	ATCGAT	2 cut(s)	393, 1263
Csp6I	GTAC	4 cut(s)	495, 925, 952, 1433
CviAII	CATG	5 cut(s)	472, 1169, 1299, 1573, 1727
CviQI	GTAC	4 cut(s)	495, 925, 952, 1433
DdeI	CTNAG	7 cut(s)	279, 467, 921, 948, 976, 988, 1342
DinI	GGCGCC	1 cut(s)	135
DpnI	GATC	8 cut(s)	587, 718, 849, 993, 1101, 1224, 1324, 1780
DpnII	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
DraI	TTTAAA	1 cut(s)	765
Eam1104I	CTCTTC	4 cut(s)	118, 155, 699, 795
EarI	CTCTTC	4 cut(s)	118, 155, 699, 795
Eco130I	CCWWGG	1 cut(s)	741
Eco24I	GRGCYC	1 cut(s)	570
Eco31I	GGTCTC	1 cut(s)	254
Eco32I	GATATC	1 cut(s)	645
Eco47I	GGWCC	3 cut(s)	4, 401, 1252
Eco57I	CTGAAG	1 cut(s)	897
Eco88I	CYCGRG	1 cut(s)	1558
Eco91I	GGTNACC	1 cut(s)	454
EcoO65I	GGTNACC	1 cut(s)	454
EcoRII	CCWGG	1 cut(s)	1353
EcoRV	GATATC	1 cut(s)	645
EcoT14I	CCWWGG	1 cut(s)	741
EcoT22I	ATGCAT	2 cut(s)	700, 1304
EcoT38I	GRGCYC	1 cut(s)	570
EgeI	GGCGCC	1 cut(s)	135
EheI	GGCGCC	1 cut(s)	135
ErhI	CCWWGG	1 cut(s)	741
Esp3I	CGTCTC	1 cut(s)	417
FaeI	CATG	5 cut(s)	475, 1172, 1302, 1576, 1730
FalI	AAGNNNNNCTT	4 cut(s)	895, 927, 1813, 1845
FaqI	GGGAC	2 cut(s)	1682, 1823
FatI	CATG	5 cut(s)	471, 1168, 1298, 1572, 1726
Fnu4HI	GCNGC	6 cut(s)	185, 207, 1047, 1050, 1582, 1827
FokI	GGATG	8 cut(s)	536, 671, 700, 824, 977, 1034, 1137, 1668
FriOI	GRGCYC	1 cut(s)	570
Fsp4HI	GCNGC	6 cut(s)	185, 207, 1047, 1050, 1582, 1827
FspBI	CTAG	2 cut(s)	1430, 1550
GlaI	GCGC	3 cut(s)	52, 76, 135
GluI	GCNGC	6 cut(s)	185, 207, 1047, 1050, 1582, 1827
GsaI	CCCAGC	1 cut(s)	422
GsuI	CTGGAG	2 cut(s)	290, 1188
HaeII	RGCGCY	1 cut(s)	137
HaeIII	GGCC	1 cut(s)	14
HapII	CCGG	3 cut(s)	119, 851, 1326
HhaI	GCGC	3 cut(s)	53, 77, 136
Hin1I	GRCGYC	1 cut(s)	134
Hin1II	CATG	5 cut(s)	475, 1172, 1302, 1576, 1730
Hin6I	GCGC	3 cut(s)	51, 75, 134
HinP1I	GCGC	3 cut(s)	51, 75, 134
HindIII	AAGCTT	1 cut(s)	605
HpaII	CCGG	3 cut(s)	119, 851, 1326
HphI	GGTGA	2 cut(s)	448, 1522
Hpy166II	GTNNAC	3 cut(s)	1449, 1483, 1522
Hpy188III	TCNNGA	6 cut(s)	119, 251, 1459, 1566, 1821, 1873
Hpy8I	GTNNAC	3 cut(s)	1449, 1483, 1522
Hpy99I	CGWCG	2 cut(s)	409, 431
HpyAV	CCTTC	6 cut(s)	229, 521, 545, 1544, 1681, 1685
HpyCH4III	ACNGT	3 cut(s)	494, 1465, 1801
HpyCH4IV	ACGT	6 cut(s)	63, 224, 354, 633, 1479, 1731
HpyF10VI	GCNNNNNNNGC	5 cut(s)	193, 215, 415, 443, 468
HpyF3I	CTNAG	7 cut(s)	279, 467, 921, 948, 976, 988, 1342
HpySE526I	ACGT	6 cut(s)	63, 224, 354, 633, 1479, 1731
Hsp92I	GRCGYC	1 cut(s)	134
Hsp92II	CATG	5 cut(s)	475, 1172, 1302, 1576, 1730
HspAI	GCGC	3 cut(s)	51, 75, 134
KasI	GGCGCC	1 cut(s)	133
Kpn2I	TCCGGA	1 cut(s)	118
Kzo9I	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
LguI	GCTCTTC	2 cut(s)	699, 795
LmnI	GCTCC	4 cut(s)	315, 511, 665, 1401
Lsp1109I	GCAGC	4 cut(s)	1036, 1058, 1593, 1813
LweI	GCATC	6 cut(s)	685, 955, 1225, 1311, 1498, 1610
MaeI	CTAG	2 cut(s)	1430, 1550
MaeII	ACGT	6 cut(s)	63, 224, 354, 633, 1479, 1731
MaeIII	GTNAC	4 cut(s)	274, 454, 629, 1720
MalI	GATC	8 cut(s)	587, 718, 849, 993, 1101, 1224, 1324, 1780
MboI	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
MflI	RGATCY	3 cut(s)	716, 991, 1322
MhlI	GDGCHC	2 cut(s)	369, 570
Mly113I	GGCGCC	1 cut(s)	134
MlyI	GAGTC	2 cut(s)	1578, 1704
MmeI	TCCRAC	2 cut(s)	396, 789
Mph1103I	ATGCAT	2 cut(s)	700, 1304
MroI	TCCGGA	1 cut(s)	118
MroXI	GAANNNNTTC	1 cut(s)	910
MspA1I	CMGCKG	2 cut(s)	209, 1049
MspCI	CTTAAG	1 cut(s)	614
MspI	CCGG	3 cut(s)	119, 851, 1326
MspR9I	CCNGG	1 cut(s)	1355
MvaI	CCWGG	1 cut(s)	1355
MvnI	CGCG	1 cut(s)	1719
MwoI	GCNNNNNNNGC	5 cut(s)	193, 215, 415, 443, 468
NarI	GGCGCC	1 cut(s)	134
NdeII	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
NlaIII	CATG	5 cut(s)	475, 1172, 1302, 1576, 1730
NlaIV	GGNNCC	7 cut(s)	6, 135, 402, 667, 804, 1324, 1679
NmuCI	GTSAC	1 cut(s)	454
NsiI	ATGCAT	2 cut(s)	700, 1304
NspI	RCATGY	1 cut(s)	1302
NspV	TTCGAA	1 cut(s)	323
PaeI	GCATGC	1 cut(s)	1302
PaeR7I	CTCGAG	1 cut(s)	1558
PaqCI	CACCTGC	2 cut(s)	201, 467
PciSI	GCTCTTC	2 cut(s)	699, 795
PdmI	GAANNNNTTC	1 cut(s)	910
PfeI	GAWTC	8 cut(s)	336, 390, 432, 541, 773, 938, 1503, 1710
PflMI	CCANNNNNTGG	1 cut(s)	1174
PkrI	GCNGC	6 cut(s)	186, 208, 1048, 1051, 1583, 1828
PleI	GAGTC	2 cut(s)	1577, 1703
PluTI	GGCGCC	1 cut(s)	137
PpsI	GAGTC	2 cut(s)	1577, 1703
Ppu21I	YACGTR	1 cut(s)	1480
PshBI	ATTAAT	1 cut(s)	885
Psp1406I	AACGTT	1 cut(s)	354
Psp6I	CCWGG	1 cut(s)	1353
PspEI	GGTNACC	1 cut(s)	454
PspFI	CCCAGC	1 cut(s)	418
PspGI	CCWGG	1 cut(s)	1353
PspN4I	GGNNCC	7 cut(s)	6, 135, 402, 667, 804, 1324, 1679
PspPI	GGNCC	3 cut(s)	4, 401, 1252
PspXI	VCTCGAGB	1 cut(s)	1558
PstI	CTGCAG	2 cut(s)	724, 1583
PstNI	CAGNNNCTG	1 cut(s)	920
PsuI	RGATCY	3 cut(s)	716, 991, 1322
PvuII	CAGCTG	1 cut(s)	1049
RsaI	GTAC	4 cut(s)	496, 926, 953, 1434
RsaNI	GTAC	4 cut(s)	495, 925, 952, 1433
SapI	GCTCTTC	2 cut(s)	699, 795
SatI	GCNGC	6 cut(s)	185, 207, 1047, 1050, 1582, 1827
Sau3AI	GATC	8 cut(s)	585, 716, 847, 991, 1099, 1222, 1322, 1778
Sau96I	GGNCC	3 cut(s)	4, 401, 1252
ScaI	AGTACT	1 cut(s)	496
SchI	GAGTC	2 cut(s)	1578, 1704
ScrFI	CCNGG	1 cut(s)	1355
SduI	GDGCHC	2 cut(s)	369, 570
SfaNI	GCATC	6 cut(s)	685, 955, 1225, 1311, 1498, 1610
SfcI	CTRYAG	4 cut(s)	490, 720, 1041, 1579
SfoI	GGCGCC	1 cut(s)	135
Sfr274I	CTCGAG	1 cut(s)	1558
SfuI	TTCGAA	1 cut(s)	323
SinI	GGWCC	3 cut(s)	4, 401, 1252
SlaI	CTCGAG	1 cut(s)	1558
SmlI	CTYRAG	3 cut(s)	260, 614, 1558
SmoI	CTYRAG	3 cut(s)	260, 614, 1558
SpeI	ACTAGT	1 cut(s)	1549
SphI	GCATGC	1 cut(s)	1302
SsiI	CCGC	5 cut(s)	182, 185, 207, 955, 1717
SspDI	GGCGCC	1 cut(s)	133
SspI	AATATT	2 cut(s)	1231, 1408
SspMI	CTAG	2 cut(s)	1430, 1550
StyD4I	CCNGG	1 cut(s)	1353
StyI	CCWWGG	1 cut(s)	741
TaaI	ACNGT	3 cut(s)	494, 1465, 1801
TaiI	ACGT	6 cut(s)	66, 227, 357, 636, 1482, 1734
TatI	WGTACW	2 cut(s)	494, 1432
TauI	GCSGC	2 cut(s)	187, 209
TfiI	GAWTC	8 cut(s)	336, 390, 432, 541, 773, 938, 1503, 1710
TscAI	CASTG	4 cut(s)	729, 1023, 1035, 1123
TseFI	GTSAC	1 cut(s)	454
TseI	GCWGC	4 cut(s)	1046, 1049, 1581, 1826
Tsp45I	GTSAC	1 cut(s)	454
TspDTI	ATGAA	3 cut(s)	488, 540, 1892
TspGWI	ACGGA	4 cut(s)	393, 402, 444, 1857
TspRI	CASTG	4 cut(s)	729, 1023, 1035, 1123
Van91I	CCANNNNNTGG	1 cut(s)	1174
Vha464I	CTTAAG	1 cut(s)	614
VpaK11BI	GGWCC	3 cut(s)	4, 401, 1252
VspI	ATTAAT	1 cut(s)	885
XapI	RAATTY	3 cut(s)	101, 1011, 1067
XceI	RCATGY	1 cut(s)	1302
XhoI	CTCGAG	1 cut(s)	1558
XmnI	GAANNNNTTC	1 cut(s)	910
XspI	CTAG	2 cut(s)	1430, 1550
ZrmI	AGTACT	1 cut(s)	496
Zsp2I	ATGCAT	2 cut(s)	700, 1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.