Prupe.3G206400_v2.0.a1

BPI LBP family protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
21346744 .. 21350009
3266 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G206400.1

Sequence Viewer

Length: 1539 bp
ATGGCCAAAATCATTCATCTTTTTTTCTCTTGCCCAGAGACCTCAATGGCACCACCAACCATTGTCATGCTTCTCATAGCTTCATTCTTCATTTCAACGCAGACCCATCTCCAAGTCCAAGCCACAGACGACGCCTTCACATCCATAGTCATATCCCAAAAGGGTCTCGATTTTCTCAAGGACTTGCTCATAACTAAGGCTGTTTCTTCCATAATCCCACTGCAACTGCCCCAAATTTCGAAATCCACGAGGATCCCATTTCTGGGAAATGTTAATATGGTGCTCTCCAACATCACAATCTACGGAATCGATGTTGGTTCCTCGTATTTCAAGCTGGGAGATGATGGAATTGCCATTATTGCTTCGGGGACCACATGCAATCTGAGCATGAGTTGGTATTATTCCTATAGTACCTGGATTGCACCTGTAGTTGTTTCAGATGAAGGTCGTGCCTCTATTCAGGTTGAAGGCTTGGAAGTTGGGCTCACATTAGGCTTGGGGATACAAGATGGAACTTTAAAGCTTACCCTCAAGGATTGTGGTTGTTACGTTAAAGATATTTCCATAAAACTGGATGGAGGAGCCTCTTGGCTTTATCAAGGGATGATTAATGCATTTGAAGAGCAAATAGGATCTGCAGTGGAAACTTCTGTCACCAAGAAACTCAAAGATGGGATTGTAAAGCTTGATTCACTTCTGCAAGCTCTTCCAAAGGAGATGCCACTGGATGATAATACTTCTTTGAACGTCACTTTTGTGAATGACCCAGTATTGAGTAATTCTTCCATAGGGTTTGAGGTTAATGGTTTATTTGCAAGAAGAAATGCCTCAGTCTCTAAGTACCACAATAAGGATTCACAAGCATTAGTTTCCTGCTCCGATTCATCTAAAATGCTTGGAATTTCACTGGATGAGGCTGTGTTCAACTCTGTAGGAGCTGCATATTTTAATGCAGAATTTATGCAATGGATTGTGGATAAAATACCAGATCAGTCTTTTTTGAACACTGCTGGATGGAGATATATTGTTCCCCAACTATACAAGAAATATCCAAACCATGATATGGACTTGAATGTTTCCTTATCTTCTCCTCCAGTCGTGAGGATCTCAGAGCATAATATTGATGCTACCATATACGCAGACCTGATCATTGATGTATTGGAAGAAAACAGAGTAATACCAGTGGCTTGCATCTCATTGGTCATTCGTGCATCAGGTTCAGTTAAAATCTCAGGCAATAACCTTGCTGGTAGCATAAAATTGAATGACTTTTCAATGTCATTGAAGTGGAGCAATATTGGCAATCTTCGCTTGTATCTAATTCAGCCAGTGATGTGGACAATTATTCAGACTGTTTTCCTGCCATATGTGAACTCACACCTCGGAAAGGGATTCCCCTTACCAATCATTCACGGCTTCACGCTTCAAAACGCCGAACTAGTCTGCTCAAGTTCAAGAATTATGGTCTGCAGCGATGTAATTTATAGCGCGGCATCACGCTCACAGAATCTTAATTGGCTTCTGCACAGCTTTGTCTAA

Protein Analysis

513

Amino Acids

56.1

Weight (kDa)

5.53

Isoelectric Point (pI)

34.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 49
AccB7I CCANNNNNTGG 1 cut(s) 1063
AccII CGCG 1 cut(s) 1490
AciI CCGC 1 cut(s) 1490
AclWI GGATC 4 cut(s) 247, 260, 640, 1112
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 234, 900, 956
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 2 cut(s) 412, 842
AfiI CCNNNNNNNGG 5 cut(s) 262, 263, 850, 1063, 1387
AhlI ACTAGT 1 cut(s) 1438
AjnI CCWGG 1 cut(s) 413
AleI CACNNNNGTG 1 cut(s) 755
AluBI AGCT 7 cut(s) 80, 334, 523, 685, 704, 938, 1530
AluI AGCT 7 cut(s) 80, 334, 523, 685, 704, 938, 1530
Alw21I GWGCWC 1 cut(s) 285
Alw26I GTCTC 3 cut(s) 32, 170, 838
AlwI GGATC 4 cut(s) 247, 260, 640, 1112
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 938, 1470
ApoI RAATTY 3 cut(s) 234, 900, 956
AseI ATTAAT 1 cut(s) 609
AspLEI GCGC 1 cut(s) 1490
AspS9I GGNCC 1 cut(s) 369
AsuHPI GGTGA 1 cut(s) 646
AsuII TTCGAA 1 cut(s) 239
AvaII GGWCC 1 cut(s) 369
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 252
BanI GGYRCC 1 cut(s) 49
BanII GRGCYC 1 cut(s) 486
BauI CACGAG 1 cut(s) 247
Bbv12I GWGCWC 1 cut(s) 285
BbvI GCAGC 2 cut(s) 925, 1482
BccI CCATC 6 cut(s) 114, 338, 503, 569, 665, 1008
BceAI ACGGC 1 cut(s) 1429
BciT130I CCWGG 1 cut(s) 415
BciVI GTATCC 1 cut(s) 495
BclI TGATCA 1 cut(s) 1146
BcoDI GTCTC 3 cut(s) 32, 170, 838
BcuI ACTAGT 1 cut(s) 1438
BfaI CTAG 1 cut(s) 1439
BfmI CTRYAG 5 cut(s) 406, 426, 636, 930, 1468
BfuI GTATCC 1 cut(s) 495
BisI GCNGC 3 cut(s) 939, 1471, 1491
BlsI GCNGC 3 cut(s) 940, 1472, 1492
Bme1390I CCNGG 1 cut(s) 415
Bme18I GGWCC 1 cut(s) 369
BmgT120I GGNCC 1 cut(s) 369
BmiI GGNNCC 5 cut(s) 51, 254, 319, 370, 583
BmrFI CCNGG 1 cut(s) 415
BmrI ACTGGG 1 cut(s) 761
BmsI GCATC 5 cut(s) 708, 1114, 1200, 1220, 1502
BmuI ACTGGG 1 cut(s) 761
BpmI CTGGAG 1 cut(s) 1077
Bpu14I TTCGAA 1 cut(s) 239
BpuEI CTTGAG 3 cut(s) 161, 515, 1432
Bsa29I ATCGAT 1 cut(s) 309
BsaHI GRCGYC 1 cut(s) 132
BsaI GGTCTC 2 cut(s) 32, 170
BsaJI CCNNGG 1 cut(s) 1381
Bsc4I CCNNNNNNNGG 5 cut(s) 262, 263, 850, 1063, 1387
Bse1I ACTGG 7 cut(s) 576, 729, 767, 912, 1094, 1181, 1328
Bse3DI GCAATG 1 cut(s) 971
BseBI CCWGG 1 cut(s) 415
BseCI ATCGAT 1 cut(s) 309
BseDI CCNNGG 1 cut(s) 1381
BseGI GGATG 6 cut(s) 140, 580, 609, 733, 916, 1019
BseLI CCNNNNNNNGG 5 cut(s) 262, 263, 850, 1063, 1387
BseMI GCAATG 1 cut(s) 971
BseMII CTCAG 4 cut(s) 374, 843, 1122, 1245
BseNI ACTGG 7 cut(s) 576, 729, 767, 912, 1094, 1181, 1328
BseRI GAGGAG 2 cut(s) 594, 1080
BseXI GCAGC 2 cut(s) 925, 1482
BseYI CCCAGC 1 cut(s) 334
BsgI GTGCAG 1 cut(s) 1508
Bsh1236I CGCG 1 cut(s) 1490
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 49
BshVI ATCGAT 1 cut(s) 309
BsiHKAI GWGCWC 1 cut(s) 285
BslFI GGGAC 1 cut(s) 382
BslI CCNNNNNNNGG 5 cut(s) 262, 263, 850, 1063, 1387
BsmAI GTCTC 3 cut(s) 32, 170, 838
BsmFI GGGAC 1 cut(s) 382
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 2 cut(s) 32, 170
Bsp119I TTCGAA 1 cut(s) 239
Bsp1286I GDGCHC 2 cut(s) 285, 486
Bsp143I GATC 5 cut(s) 252, 632, 988, 1104, 1146
BspACI CCGC 1 cut(s) 1490
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 4 cut(s) 375, 842, 1121, 1244
BspDI ATCGAT 1 cut(s) 309
BspFNI CGCG 1 cut(s) 1490
BspLI GGNNCC 5 cut(s) 51, 254, 319, 370, 583
BspMAI CTGCAG 2 cut(s) 640, 1472
BspPI GGATC 4 cut(s) 247, 260, 640, 1112
BspQI GCTCTTC 2 cut(s) 615, 711
BspT104I TTCGAA 1 cut(s) 239
BspT107I GGYRCC 1 cut(s) 49
BspTNI GGTCTC 2 cut(s) 32, 170
BsrDI GCAATG 1 cut(s) 971
BsrI ACTGG 7 cut(s) 576, 729, 767, 912, 1094, 1181, 1328
BssECI CCNNGG 1 cut(s) 1381
BssMI GATC 5 cut(s) 252, 632, 988, 1104, 1146
BssNI GRCGYC 1 cut(s) 132
BssSI CACGAG 1 cut(s) 247
Bst2BI CACGAG 1 cut(s) 247
Bst2UI CCWGG 1 cut(s) 415
Bst4CI ACNGT 1 cut(s) 1354
Bst6I CTCTTC 2 cut(s) 615, 711
BstACI GRCGYC 1 cut(s) 132
BstBI TTCGAA 1 cut(s) 239
BstC8I GCNNGC 2 cut(s) 702, 1189
BstDEI CTNAG 6 cut(s) 195, 383, 829, 837, 1108, 1231
BstENI CCTNNNNNAGG 1 cut(s) 1385
BstF5I GGATG 6 cut(s) 140, 580, 609, 733, 916, 1019
BstFNI CGCG 1 cut(s) 1490
BstHHI GCGC 1 cut(s) 1490
BstKTI GATC 5 cut(s) 255, 635, 991, 1107, 1149
BstMAI GTCTC 3 cut(s) 32, 170, 838
BstMBI GATC 5 cut(s) 252, 632, 988, 1104, 1146
BstMWI GCNNNNNNNGC 4 cut(s) 359, 384, 1299, 1308
BstNI CCWGG 1 cut(s) 415
BstNSI RCATGY 1 cut(s) 378
BstSCI CCNGG 1 cut(s) 413
BstSFI CTRYAG 5 cut(s) 406, 426, 636, 930, 1468
BstUI CGCG 1 cut(s) 1490
BstV1I GCAGC 2 cut(s) 925, 1482
BstX2I RGATCY 3 cut(s) 252, 632, 1104
BstXI CCANNNNNNTGG 2 cut(s) 571, 1335
BstYI RGATCY 3 cut(s) 252, 632, 1104
Bsu15I ATCGAT 1 cut(s) 309
BsuI GTATCC 1 cut(s) 495
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 309
BtgZI GCGATG 1 cut(s) 1488
BtsCI GGATG 6 cut(s) 140, 580, 609, 733, 916, 1019
BtsI GCAGTG 3 cut(s) 218, 645, 1005
BtsIMutI CAGTG 7 cut(s) 218, 645, 722, 905, 1005, 1188, 1335
Cac8I GCNNGC 2 cut(s) 702, 1189
CfoI GCGC 1 cut(s) 1490
Cfr13I GGNCC 1 cut(s) 369
ClaI ATCGAT 1 cut(s) 309
CseI GACGC 1 cut(s) 140
Csp6I GTAC 2 cut(s) 411, 841
CspCI CAANNNNNGTGG 2 cut(s) 520, 555
CviAII CATG 4 cut(s) 67, 375, 388, 1058
CviQI GTAC 2 cut(s) 411, 841
DdeI CTNAG 6 cut(s) 195, 383, 829, 837, 1108, 1231
DpnI GATC 5 cut(s) 254, 634, 990, 1106, 1148
DpnII GATC 5 cut(s) 252, 632, 988, 1104, 1146
DraI TTTAAA 1 cut(s) 519
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 615, 711
EarI CTCTTC 2 cut(s) 615, 711
Eco24I GRGCYC 1 cut(s) 486
Eco31I GGTCTC 2 cut(s) 32, 170
Eco47I GGWCC 1 cut(s) 369
EcoNI CCTNNNNNAGG 1 cut(s) 1385
EcoRII CCWGG 1 cut(s) 413
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 486
FaeI CATG 4 cut(s) 70, 378, 391, 1061
FaqI GGGAC 1 cut(s) 382
FatI CATG 4 cut(s) 66, 374, 387, 1057
FauNDI CATATG 1 cut(s) 1366
FbaI TGATCA 1 cut(s) 1146
Fnu4HI GCNGC 3 cut(s) 939, 1471, 1491
FokI GGATG 6 cut(s) 127, 587, 616, 740, 923, 1026
FriOI GRGCYC 1 cut(s) 486
Fsp4HI GCNGC 3 cut(s) 939, 1471, 1491
FspBI CTAG 1 cut(s) 1439
GlaI GCGC 1 cut(s) 1489
GluI GCNGC 3 cut(s) 939, 1471, 1491
GsaI CCCAGC 1 cut(s) 338
GsuI CTGGAG 1 cut(s) 1077
HaeIII GGCC 1 cut(s) 5
HgaI GACGC 1 cut(s) 140
HhaI GCGC 1 cut(s) 1490
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 4 cut(s) 70, 378, 391, 1061
Hin6I GCGC 1 cut(s) 1488
HinP1I GCGC 1 cut(s) 1488
HindIII AAGCTT 2 cut(s) 521, 683
HinfI GANTC 6 cut(s) 306, 689, 854, 881, 1392, 1507
HphI GGTGA 1 cut(s) 646
Hpy166II GTNNAC 2 cut(s) 1338, 1372
Hpy188I TCNGA 6 cut(s) 384, 439, 880, 1111, 1350, 1385
Hpy188III TCNNGA 3 cut(s) 167, 1099, 1455
Hpy8I GTNNAC 2 cut(s) 1338, 1372
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 3 cut(s) 145, 437, 461
HpyCH4III ACNGT 1 cut(s) 1354
HpyCH4IV ACGT 2 cut(s) 549, 747
HpyF10VI GCNNNNNNNGC 4 cut(s) 359, 384, 1299, 1308
HpyF3I CTNAG 6 cut(s) 195, 383, 829, 837, 1108, 1231
HpySE526I ACGT 2 cut(s) 549, 747
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 4 cut(s) 70, 378, 391, 1061
HspAI GCGC 1 cut(s) 1488
Ksp22I TGATCA 1 cut(s) 1146
Kzo9I GATC 5 cut(s) 252, 632, 988, 1104, 1146
LguI GCTCTTC 2 cut(s) 615, 711
LmnI GCTCC 4 cut(s) 581, 881, 935, 1290
Lsp1109I GCAGC 2 cut(s) 925, 1482
LweI GCATC 5 cut(s) 708, 1114, 1200, 1220, 1502
MaeI CTAG 1 cut(s) 1439
MaeII ACGT 2 cut(s) 549, 747
MaeIII GTNAC 3 cut(s) 545, 652, 748
MalI GATC 5 cut(s) 254, 634, 990, 1106, 1148
MboI GATC 5 cut(s) 252, 632, 988, 1104, 1146
MboII GAAGA 9 cut(s) 79, 198, 632, 698, 774, 831, 1077, 1175, 1298
MflI RGATCY 3 cut(s) 252, 632, 1104
MhlI GDGCHC 2 cut(s) 285, 486
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 312
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 616
MscI TGGCCA 1 cut(s) 5
MseI TTAA 8 cut(s) 273, 518, 552, 609, 801, 948, 1224, 1512
MslI CAYNNNNRTG 3 cut(s) 65, 755, 1285
Msp20I TGGCCA 1 cut(s) 5
MspR9I CCNGG 1 cut(s) 415
MvaI CCWGG 1 cut(s) 415
MvnI CGCG 1 cut(s) 1490
MwoI GCNNNNNNNGC 4 cut(s) 359, 384, 1299, 1308
NdeI CATATG 1 cut(s) 1366
NdeII GATC 5 cut(s) 252, 632, 988, 1104, 1146
NlaIII CATG 4 cut(s) 70, 378, 391, 1061
NlaIV GGNNCC 5 cut(s) 51, 254, 319, 370, 583
NmuCI GTSAC 2 cut(s) 652, 748
NsiI ATGCAT 1 cut(s) 616
NspI RCATGY 1 cut(s) 378
NspV TTCGAA 1 cut(s) 239
OliI CACNNNNGTG 1 cut(s) 755
PciSI GCTCTTC 2 cut(s) 615, 711
PcsI WCGNNNNNNNCGW 1 cut(s) 245
PfeI GAWTC 6 cut(s) 306, 689, 854, 881, 1392, 1507
PflMI CCANNNNNTGG 1 cut(s) 1063
PkrI GCNGC 3 cut(s) 940, 1472, 1492
PshBI ATTAAT 1 cut(s) 609
Psp6I CCWGG 1 cut(s) 413
PspFI CCCAGC 1 cut(s) 334
PspGI CCWGG 1 cut(s) 413
PspN4I GGNNCC 5 cut(s) 51, 254, 319, 370, 583
PspPI GGNCC 1 cut(s) 369
PstI CTGCAG 2 cut(s) 640, 1472
PsuI RGATCY 3 cut(s) 252, 632, 1104
RsaI GTAC 2 cut(s) 412, 842
RsaNI GTAC 2 cut(s) 411, 841
RseI CAYNNNNRTG 3 cut(s) 65, 755, 1285
SapI GCTCTTC 2 cut(s) 615, 711
SaqAI TTAA 8 cut(s) 273, 518, 552, 609, 801, 948, 1224, 1512
SatI GCNGC 3 cut(s) 939, 1471, 1491
Sau3AI GATC 5 cut(s) 252, 632, 988, 1104, 1146
Sau96I GGNCC 1 cut(s) 369
ScrFI CCNGG 1 cut(s) 415
SduI GDGCHC 2 cut(s) 285, 486
SfaNI GCATC 5 cut(s) 708, 1114, 1200, 1220, 1502
SfcI CTRYAG 5 cut(s) 406, 426, 636, 930, 1468
SfuI TTCGAA 1 cut(s) 239
SinI GGWCC 1 cut(s) 369
SmiMI CAYNNNNRTG 3 cut(s) 65, 755, 1285
SmlI CTYRAG 3 cut(s) 176, 530, 1447
SmoI CTYRAG 3 cut(s) 176, 530, 1447
SpeI ACTAGT 1 cut(s) 1438
SsiI CCGC 1 cut(s) 1490
SspI AATATT 2 cut(s) 1120, 1297
SspMI CTAG 1 cut(s) 1439
StyD4I CCNGG 1 cut(s) 413
TaaI ACNGT 1 cut(s) 1354
TaiI ACGT 2 cut(s) 552, 750
TaqI TCGA 3 cut(s) 168, 239, 309
TauI GCSGC 1 cut(s) 1493
TfiI GAWTC 6 cut(s) 306, 689, 854, 881, 1392, 1507
Tru1I TTAA 8 cut(s) 273, 518, 552, 609, 801, 948, 1224, 1512
Tru9I TTAA 8 cut(s) 273, 518, 552, 609, 801, 948, 1224, 1512
TscAI CASTG 7 cut(s) 225, 645, 729, 912, 1012, 1188, 1335
TseFI GTSAC 2 cut(s) 652, 748
TseI GCWGC 2 cut(s) 938, 1470
Tsp45I GTSAC 2 cut(s) 652, 748
TspDTI ATGAA 5 cut(s) 5, 72, 79, 456, 873
TspGWI ACGGA 1 cut(s) 318
TspRI CASTG 7 cut(s) 225, 645, 729, 912, 1012, 1188, 1335
Van91I CCANNNNNTGG 1 cut(s) 1063
VpaK11BI GGWCC 1 cut(s) 369
VspI ATTAAT 1 cut(s) 609
XagI CCTNNNNNAGG 1 cut(s) 1385
XapI RAATTY 3 cut(s) 234, 900, 956
XceI RCATGY 1 cut(s) 378
XspI CTAG 1 cut(s) 1439
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.