MD09G1167000.v1.1

pyrophosphate-energized membrane proton pump

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0005820
Physical Location & Seq
Reverse (-)
13692175 .. 13699947
7773 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1167000.v1.1.491

Sequence Viewer

Length: 2409 bp
ATGGTCATGGATGTTGACGTGGAGGGTGGTAATTTGGGGCCTTACCAAGACAGACCGAGGACATTCCCTAACATGCGTGGTAAATCTTACAACCCATTGATTTTTCGGATTCTGATGCGGATAAATGTCCGTGTTCGTTTTGTTATTTTACTTATTGCGCTTGGAGTGGTCTTTTACATTGGAGCAAGTACTTCTCCTATCATTGTGTTCGTCTTCGCAATTTGTATTATCAGCTTTCTGGTGTCTATGCACCTGGCGAAATGGGTTCTTGCAAAGGATGAGGGACCTCTGGAGATGGGTCAGATATCAGATGCAATACGTGATGGAGCTGAAGGTTTCTTCAGGACCCAGTATGGGACCATCTCTAAGATGGCATTTTTACTAGCTGCGGTTATTTTCTGCATATATTTATTTCGCAGACCGACACCTCAGCAAGAAGCATCTGGTCTCGGGAGGTTCACTTCAGCTTATATTACGGTAGCTGCATTTCTTTTGGGAGCTTTGTGTTCTGGTGCTGCTGGGTATGTTGGGATGTGGGTTTCAGTTCGTGCAAATGTTAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTACAGATAGCTGTTCGTGCTGGTGGTTTTTCTGCTTTGGTGGTTGTTGGTATGGCTGTACTTGGTATAGCCATCCTGTATGCCACATTTTATGTTTGGTTGGGAGTGGATTCGCCAGGTTCAATGAAGGTTACTGACTTGCCTCTTCTGCTTGTTGGATATGGATTTGGTGCTTCTTTTGTTGCCTTATTTGCTCAGTTGGGAGGTGGAATATACACCAAAGCAGCTGATGTTGGAGCAGATCTTGTTGGAAAAGTAGAGCAGGGAATTCCCGAAGATGACCCTAGGAATCCTGCTGTGATTGCAGATCTGGTTGGAGACAATGTGGGAGATTGCGCAGCCCGTGGTGCTGATCTTTTTGAAAGTATTGCTGCTGAGATTATTAGTGCTATGATACTCGGGGGAACGATGGCTCAACGTTGTAAAATTGAAGATGCATCTGGTTTCATCTTGTTTCCTCTGGTTGTTCACTCTTTTGATCTGGTGATTTCATCGGTCGGAATATTCTCAATTAGAGGTACACGTGATTCCAGCGGAAAGGCTTCTTCCGAGGATCCAATGAAAATTCTACAAAGAGGATATTCTATTACAATAGTCTTGGCTGTTCTGACATTTGGTGCGTCTACCCGATGGCTGCTTTACACTGAGCAAGCACCATCAGCCTGGTTTAACTTTGCCTTGTGTGGGCTAGTTGGGATCATCACAGCATATGTTTTCGTCTTTATCACCCAGTACTATACCGACTACAAACATGAGCCTGTACGCACATTAGCTCTTGCAAGCTCCACAGGTCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTTGAATCAACTGCTCTTCCGGTTCTTGTCATTAGTGTATCTATTATCTCAGCTTACTGGCTGGGCCAGACCTCTGGCCTTATAGACGAAAATGGAATTCCGACTGGTGGGCTGTTTGGCACAGCTGTAGCAACAATGGGAATGCTCAGTACTGCTGCGTATGTTCTCACTATGGATATGTTTGGTCCAATAGCTGATAATGCTGGTGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTTCGGGAGATCACCGATGTTCTAGATGCTGTAGGAAACACTACAAAAGCTACTACTAAAGGATTTGCCATAGGATCTGCTGCACTTGCATCTTTTCTTCTGTTTAGTGCTTATATGGATGAGGTTGCTGCATTTGCACGTGAGCCTTTCAAACAGGTTGATATTGCCATTCCAGAAGTTTTTGTTGGCGGATTGTTGGGTTCTATGCTGATATTTTTATTTAGTGCTTGGGCCTGTTCAGCAGTTGGCCGAACTGCTCAAGAGGTGGTTAAGGAAGTAAGGCGACAATTTATTGAGAGGCCTGGGATAATGGAGTACAAGGAGAAGCCAGATTATGCTCGTTGTGTCGCTATTGTAGCATCTGCATCTTTAAGGGAGATGATAAAACCTGGTGCCTTGGCTATTATTTCACCTATAGCTGTTGGTATTGTGTTCCGGATCTTTGGATTTTATACTGGGCAACCTCTACTCGGTGCTAAAGTTGTGGCGTCCATGCTGATGTTTGCAACTGTTTCCGGTATTCTTATGGCACTTTTCCTCAACACAGCAGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACGGGGGTTCTTGGTGGCAAAGGAAGTGATTGCCATAAGGCTGCCATTACAGGAGATACTGTGGGCGACCCATTCAAAGACACAGCCGGACCTTCACTGCACGTTCTCATTAAAATGCTTGCTACAATCACGCTGGTTATGGCTCCTGTCTTTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
H_PPase

Protein Analysis

803

Amino Acids

85.22

Weight (kDa)

6.17

Isoelectric Point (pI)

28.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 76 - 797 2.1e-255 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2204
Acc16I TGCGCA 1 cut(s) 934
Acc36I ACCTGC 1 cut(s) 2204
AccB1I GGYRCC 2 cut(s) 2057, 2219
AccI GTMKAC 1 cut(s) 1220
AccIII TCCGGA 1 cut(s) 2100
AciI CCGC 4 cut(s) 118, 389, 1131, 1854
AclI AACGTT 1 cut(s) 1015
AclWI GGATC 5 cut(s) 1145, 1158, 1301, 1747, 2111
AcoI YGGCCR 1 cut(s) 1912
AcsI RAATTY 3 cut(s) 864, 1161, 1521
AcuI CTGAAG 3 cut(s) 325, 351, 447
AcvI CACGTG 2 cut(s) 1121, 1805
AcyI GRCGYC 1 cut(s) 2153
AfaI GTAC 8 cut(s) 190, 657, 1117, 1331, 1359, 1576, 1982, 2243
AfiI CCNNNNNNNGG 4 cut(s) 354, 1281, 1532, 2135
AflIII ACRYGT 1 cut(s) 1118
AgsI TTSAA 6 cut(s) 720, 959, 1028, 1430, 1816, 2326
AjiI CACGTC 1 cut(s) 19
AjnI CCWGG 6 cut(s) 252, 712, 1259, 1966, 2053, 2222
AjuI GAANNNNNNNTTGG 2 cut(s) 1833, 1865
Alw26I GTCTC 4 cut(s) 452, 568, 909, 2243
AlwI GGATC 5 cut(s) 1145, 1158, 1301, 1747, 2111
Ama87I CYCGRG 2 cut(s) 449, 995
Aor13HI TCCGGA 1 cut(s) 2100
AoxI GGCC 6 cut(s) 38, 1489, 1501, 1896, 1912, 1964
ApoI RAATTY 3 cut(s) 864, 1161, 1521
Asp700I GAANNNNTTC 2 cut(s) 1138, 1665
AspA2I CCTAGG 1 cut(s) 881
AspLEI GCGC 2 cut(s) 160, 935
AspS9I GGNCC 8 cut(s) 38, 284, 345, 357, 1489, 1610, 1896, 2339
AsuHPI GGTGA 4 cut(s) 1093, 1315, 1669, 2067
AvaI CYCGRG 2 cut(s) 449, 995
AvaII GGWCC 5 cut(s) 284, 345, 357, 1610, 2339
AvrII CCTAGG 1 cut(s) 881
BamHI GGATCC 1 cut(s) 1150
BanI GGYRCC 2 cut(s) 2057, 2219
BbrPI CACGTG 2 cut(s) 1121, 1805
BbsI GAAGAC 1 cut(s) 205
BbvCI CCTCAGC 1 cut(s) 429
BccI CCATC 8 cut(s) 289, 317, 364, 368, 677, 1000, 1221, 1261
BciT130I CCWGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
BcoDI GTCTC 4 cut(s) 452, 568, 909, 2243
BfaI CTAG 5 cut(s) 383, 567, 882, 1286, 1688
BfmI CTRYAG 3 cut(s) 1551, 1695, 2079
BfuAI ACCTGC 1 cut(s) 2204
BglII AGATCT 2 cut(s) 838, 904
BlnI CCTAGG 1 cut(s) 881
BmcAI AGTACT 3 cut(s) 190, 1331, 1576
Bme1390I CCNGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
Bme18I GGWCC 5 cut(s) 284, 345, 357, 1610, 2339
BmeT110I CYCGRG 2 cut(s) 449, 995
BmgBI CACGTC 1 cut(s) 19
BmgT120I GGNCC 8 cut(s) 38, 284, 345, 357, 1489, 1610, 1896, 2339
BmiI GGNNCC 8 cut(s) 39, 285, 347, 358, 1152, 2059, 2221, 2394
BmrFI CCNGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
BmrI ACTGGG 3 cut(s) 343, 1321, 2130
BmsI GCATC 9 cut(s) 105, 301, 449, 1021, 1043, 1681, 1763, 2033, 2039
BmuI ACTGGG 3 cut(s) 343, 1321, 2130
BpiI GAAGAC 1 cut(s) 205
BpmI CTGGAG 2 cut(s) 311, 1431
Bpu10I CCTNAGC 1 cut(s) 429
BpuEI CTTGAG 1 cut(s) 1908
BsaAI YACGTR 3 cut(s) 320, 1121, 1805
BsaHI GRCGYC 1 cut(s) 2153
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 7 cut(s) 56, 881, 940, 1146, 1967, 2061, 2223
BsaWI WCCGGW 3 cut(s) 1444, 2100, 2180
BsaXI ACNNNNNCTCC 4 cut(s) 906, 936, 2295, 2325
Bsc4I CCNNNNNNNGG 4 cut(s) 354, 1281, 1532, 2135
Bse1I ACTGG 5 cut(s) 349, 1327, 1487, 1534, 2125
BseAI TCCGGA 1 cut(s) 2100
BseBI CCWGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
BseDI CCNNGG 7 cut(s) 56, 881, 940, 1146, 1967, 2061, 2223
BseGI GGATG 5 cut(s) 16, 283, 537, 669, 1789
BseLI CCNNNNNNNGG 4 cut(s) 354, 1281, 1532, 2135
BseMII CTCAG 6 cut(s) 443, 806, 963, 1233, 1488, 1585
BseNI ACTGG 5 cut(s) 349, 1327, 1487, 1534, 2125
BseYI CCCAGC 2 cut(s) 518, 1486
BsgI GTGCAG 2 cut(s) 1731, 2333
Bsh1285I CGRYCG 1 cut(s) 1095
BshFI GGCC 6 cut(s) 40, 1491, 1503, 1898, 1914, 1966
BshNI GGYRCC 2 cut(s) 2057, 2219
BsiEI CGRYCG 1 cut(s) 1095
BsiHKCI CYCGRG 2 cut(s) 449, 995
BsiSI CCGG 4 cut(s) 1445, 2101, 2181, 2337
BslFI GGGAC 3 cut(s) 297, 370, 1408
BslI CCNNNNNNNGG 4 cut(s) 354, 1281, 1532, 2135
BsmAI GTCTC 4 cut(s) 452, 568, 909, 2243
BsmBI CGTCTC 1 cut(s) 2243
BsmFI GGGAC 3 cut(s) 297, 370, 1408
BsmI GAATGC 1 cut(s) 1572
BsnI GGCC 6 cut(s) 40, 1491, 1503, 1898, 1914, 1966
Bso31I GGTCTC 1 cut(s) 452
BsoBI CYCGRG 2 cut(s) 449, 995
Bsp13I TCCGGA 1 cut(s) 2100
Bsp143I GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
BspACI CCGC 4 cut(s) 118, 389, 1131, 1854
BspANI GGCC 6 cut(s) 40, 1491, 1503, 1898, 1914, 1966
BspCNI CTCAG 6 cut(s) 442, 805, 964, 1234, 1487, 1584
BspEI TCCGGA 1 cut(s) 2100
BspLI GGNNCC 8 cut(s) 39, 285, 347, 358, 1152, 2059, 2221, 2394
BspMI ACCTGC 1 cut(s) 2204
BspPI GGATC 5 cut(s) 1145, 1158, 1301, 1747, 2111
BspQI GCTCTTC 1 cut(s) 1446
BspT107I GGYRCC 2 cut(s) 2057, 2219
BspTNI GGTCTC 1 cut(s) 452
BsrI ACTGG 5 cut(s) 349, 1327, 1487, 1534, 2125
BssECI CCNNGG 7 cut(s) 56, 881, 940, 1146, 1967, 2061, 2223
BssMI GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
BssNI GRCGYC 1 cut(s) 2153
BssT1I CCWWGG 2 cut(s) 881, 2061
Bst2UI CCWGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
Bst4CI ACNGT 4 cut(s) 478, 582, 2176, 2311
Bst6I CTCTTC 2 cut(s) 747, 1446
BstACI GRCGYC 1 cut(s) 2153
BstAPI GCANNNNNTGC 1 cut(s) 2219
BstBAI YACGTR 3 cut(s) 320, 1121, 1805
BstC8I GCNNGC 3 cut(s) 1248, 1378, 2370
BstDEI CTNAG 7 cut(s) 366, 429, 792, 972, 1242, 1474, 1571
BstDSI CCRYGG 1 cut(s) 940
BstF5I GGATG 5 cut(s) 16, 283, 537, 669, 1789
BstHHI GCGC 2 cut(s) 160, 935
BstKTI GATC 9 cut(s) 841, 907, 952, 1078, 1153, 1296, 1677, 1742, 2106
BstMAI GTCTC 4 cut(s) 452, 568, 909, 2243
BstMBI GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
BstMCI CGRYCG 1 cut(s) 1095
BstNI CCWGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
BstNSI RCATGY 1 cut(s) 76
BstSCI CCNGG 6 cut(s) 252, 712, 1259, 1966, 2053, 2222
BstSFI CTRYAG 3 cut(s) 1551, 1695, 2079
BstV2I GAAGAC 1 cut(s) 205
BstX2I RGATCY 5 cut(s) 838, 904, 1150, 1739, 2103
BstXI CCANNNNNNTGG 2 cut(s) 1260, 1499
BstYI RGATCY 5 cut(s) 838, 904, 1150, 1739, 2103
BsuRI GGCC 6 cut(s) 40, 1491, 1503, 1898, 1914, 1966
BtgI CCRYGG 1 cut(s) 940
BtrI CACGTC 1 cut(s) 19
BtsCI GGATG 5 cut(s) 16, 283, 537, 669, 1789
BtsI GCAGTG 1 cut(s) 2345
BtsIMutI CAGTG 2 cut(s) 1239, 2345
BveI ACCTGC 1 cut(s) 2204
Cac8I GCNNGC 3 cut(s) 1248, 1378, 2370
CfoI GCGC 2 cut(s) 160, 935
Cfr13I GGNCC 8 cut(s) 38, 284, 345, 357, 1489, 1610, 1896, 2339
CseI GACGC 2 cut(s) 1206, 2142
CsiI ACCWGGT 1 cut(s) 2053
Csp6I GTAC 8 cut(s) 189, 656, 1116, 1330, 1358, 1575, 1981, 2242
CviAII CATG 5 cut(s) 7, 73, 1349, 1391, 2158
CviQI GTAC 8 cut(s) 189, 656, 1116, 1330, 1358, 1575, 1981, 2242
DdeI CTNAG 7 cut(s) 366, 429, 792, 972, 1242, 1474, 1571
DpnI GATC 9 cut(s) 840, 906, 951, 1077, 1152, 1295, 1676, 1741, 2105
DpnII GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
EaeI YGGCCR 1 cut(s) 1912
Eam1104I CTCTTC 2 cut(s) 747, 1446
EarI CTCTTC 2 cut(s) 747, 1446
EciI GGCGGA 1 cut(s) 1869
Eco130I CCWWGG 2 cut(s) 881, 2061
Eco147I AGGCCT 1 cut(s) 1966
Eco31I GGTCTC 1 cut(s) 452
Eco32I GATATC 1 cut(s) 306
Eco47I GGWCC 5 cut(s) 284, 345, 357, 1610, 2339
Eco57I CTGAAG 3 cut(s) 325, 351, 447
Eco72I CACGTG 2 cut(s) 1121, 1805
Eco88I CYCGRG 2 cut(s) 449, 995
EcoO109I RGGNCCY 3 cut(s) 38, 284, 345
EcoRI GAATTC 2 cut(s) 864, 1521
EcoRII CCWGG 6 cut(s) 252, 712, 1259, 1966, 2053, 2222
EcoRV GATATC 1 cut(s) 306
EcoT14I CCWWGG 2 cut(s) 881, 2061
EcoT22I ATGCAT 1 cut(s) 1036
ErhI CCWWGG 2 cut(s) 881, 2061
Esp3I CGTCTC 1 cut(s) 2243
FaeI CATG 5 cut(s) 10, 76, 1352, 1394, 2161
FaqI GGGAC 3 cut(s) 297, 370, 1408
FatI CATG 5 cut(s) 6, 72, 1348, 1390, 2157
FauNDI CATATG 1 cut(s) 1306
FblI GTMKAC 1 cut(s) 1220
FokI GGATG 5 cut(s) 23, 290, 544, 656, 1796
FspBI CTAG 5 cut(s) 383, 567, 882, 1286, 1688
FspI TGCGCA 1 cut(s) 934
GlaI GCGC 2 cut(s) 159, 934
GsaI CCCAGC 2 cut(s) 522, 1490
GsuI CTGGAG 2 cut(s) 311, 1431
HaeIII GGCC 6 cut(s) 40, 1491, 1503, 1898, 1914, 1966
HapII CCGG 4 cut(s) 1445, 2101, 2181, 2337
HgaI GACGC 2 cut(s) 1206, 2142
HhaI GCGC 2 cut(s) 160, 935
Hin1I GRCGYC 1 cut(s) 2153
Hin1II CATG 5 cut(s) 10, 76, 1352, 1394, 2161
Hin6I GCGC 2 cut(s) 158, 933
HinP1I GCGC 2 cut(s) 158, 933
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
HinfI GANTC 8 cut(s) 109, 561, 707, 886, 1124, 1413, 1430, 1648
HpaII CCGG 4 cut(s) 1445, 2101, 2181, 2337
HphI GGTGA 4 cut(s) 1093, 1315, 1669, 2067
Hpy166II GTNNAC 5 cut(s) 16, 459, 1066, 1118, 1221
Hpy188I TCNGA 9 cut(s) 108, 114, 303, 310, 1097, 1147, 1206, 1527, 2408
Hpy8I GTNNAC 5 cut(s) 16, 459, 1066, 1118, 1221
HpyAV CCTTC 3 cut(s) 326, 718, 2352
HpyCH4III ACNGT 4 cut(s) 478, 582, 2176, 2311
HpyCH4IV ACGT 6 cut(s) 18, 319, 1015, 1120, 1804, 2352
HpyF3I CTNAG 7 cut(s) 366, 429, 792, 972, 1242, 1474, 1571
HpySE526I ACGT 6 cut(s) 18, 319, 1015, 1120, 1804, 2352
Hsp92I GRCGYC 1 cut(s) 2153
Hsp92II CATG 5 cut(s) 10, 76, 1352, 1394, 2161
HspAI GCGC 2 cut(s) 158, 933
Kpn2I TCCGGA 1 cut(s) 2100
Kzo9I GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
LguI GCTCTTC 1 cut(s) 1446
LmnI GCTCC 6 cut(s) 182, 326, 497, 833, 1385, 2398
LweI GCATC 9 cut(s) 105, 301, 449, 1021, 1043, 1681, 1763, 2033, 2039
MabI ACCWGGT 1 cut(s) 2053
MaeI CTAG 5 cut(s) 383, 567, 882, 1286, 1688
MaeII ACGT 6 cut(s) 18, 319, 1015, 1120, 1804, 2352
MaeIII GTNAC 1 cut(s) 727
MalI GATC 9 cut(s) 840, 906, 951, 1077, 1152, 1295, 1676, 1741, 2105
MboI GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
MboII GAAGA 8 cut(s) 205, 331, 734, 884, 1040, 1134, 1433, 1754
MflI RGATCY 5 cut(s) 838, 904, 1150, 1739, 2103
MlyI GAGTC 3 cut(s) 570, 1422, 1657
MmeI TCCRAC 6 cut(s) 733, 811, 826, 892, 1075, 1550
Mph1103I ATGCAT 1 cut(s) 1036
MroI TCCGGA 1 cut(s) 2100
MroXI GAANNNNTTC 2 cut(s) 1138, 1665
MseI TTAA 4 cut(s) 1266, 1935, 2036, 2361
MslI CAYNNNNRTG 2 cut(s) 2162, 2363
MspA1I CMGCKG 3 cut(s) 824, 1131, 1550
MspI CCGG 4 cut(s) 1445, 2101, 2181, 2337
MspR9I CCNGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
Mva1269I GAATGC 1 cut(s) 1572
MvaI CCWGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
NdeI CATATG 1 cut(s) 1306
NdeII GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
NlaIII CATG 5 cut(s) 10, 76, 1352, 1394, 2161
NlaIV GGNNCC 8 cut(s) 39, 285, 347, 358, 1152, 2059, 2221, 2394
NsbI TGCGCA 1 cut(s) 934
NsiI ATGCAT 1 cut(s) 1036
NspI RCATGY 1 cut(s) 76
PaqCI CACCTGC 1 cut(s) 2204
PceI AGGCCT 1 cut(s) 1966
PciSI GCTCTTC 1 cut(s) 1446
PctI GAATGC 1 cut(s) 1572
PdmI GAANNNNTTC 2 cut(s) 1138, 1665
PfeI GAWTC 5 cut(s) 109, 707, 886, 1124, 1430
PleI GAGTC 3 cut(s) 569, 1421, 1656
PmaCI CACGTG 2 cut(s) 1121, 1805
PmlI CACGTG 2 cut(s) 1121, 1805
PpsI GAGTC 3 cut(s) 569, 1421, 1656
Ppu21I YACGTR 3 cut(s) 320, 1121, 1805
PpuMI RGGWCCY 2 cut(s) 284, 345
Psp1406I AACGTT 1 cut(s) 1015
Psp5II RGGWCCY 2 cut(s) 284, 345
Psp6I CCWGG 6 cut(s) 252, 712, 1259, 1966, 2053, 2222
PspCI CACGTG 2 cut(s) 1121, 1805
PspFI CCCAGC 2 cut(s) 518, 1486
PspGI CCWGG 6 cut(s) 252, 712, 1259, 1966, 2053, 2222
PspN4I GGNNCC 8 cut(s) 39, 285, 347, 358, 1152, 2059, 2221, 2394
PspPI GGNCC 8 cut(s) 38, 284, 345, 357, 1489, 1610, 1896, 2339
PspPPI RGGWCCY 2 cut(s) 284, 345
PsuI RGATCY 5 cut(s) 838, 904, 1150, 1739, 2103
PvuII CAGCTG 2 cut(s) 824, 1550
RsaI GTAC 8 cut(s) 190, 657, 1117, 1331, 1359, 1576, 1982, 2243
RsaNI GTAC 8 cut(s) 189, 656, 1116, 1330, 1358, 1575, 1981, 2242
RseI CAYNNNNRTG 2 cut(s) 2162, 2363
SapI GCTCTTC 1 cut(s) 1446
SaqAI TTAA 4 cut(s) 1266, 1935, 2036, 2361
Sau3AI GATC 9 cut(s) 838, 904, 949, 1075, 1150, 1293, 1674, 1739, 2103
Sau96I GGNCC 8 cut(s) 38, 284, 345, 357, 1489, 1610, 1896, 2339
ScaI AGTACT 3 cut(s) 190, 1331, 1576
SchI GAGTC 3 cut(s) 570, 1422, 1657
ScrFI CCNGG 6 cut(s) 254, 714, 1261, 1968, 2055, 2224
SexAI ACCWGGT 1 cut(s) 2053
SfaNI GCATC 9 cut(s) 105, 301, 449, 1021, 1043, 1681, 1763, 2033, 2039
SfcI CTRYAG 3 cut(s) 1551, 1695, 2079
SinI GGWCC 5 cut(s) 284, 345, 357, 1610, 2339
SmiMI CAYNNNNRTG 2 cut(s) 2162, 2363
SmlI CTYRAG 1 cut(s) 1923
SmoI CTYRAG 1 cut(s) 1923
SseBI AGGCCT 1 cut(s) 1966
SsiI CCGC 4 cut(s) 118, 389, 1131, 1854
SspI AATATT 1 cut(s) 1101
SspMI CTAG 5 cut(s) 383, 567, 882, 1286, 1688
StuI AGGCCT 1 cut(s) 1966
StyD4I CCNGG 6 cut(s) 252, 712, 1259, 1966, 2053, 2222
StyI CCWWGG 2 cut(s) 881, 2061
TaaI ACNGT 4 cut(s) 478, 582, 2176, 2311
TaiI ACGT 6 cut(s) 21, 322, 1018, 1123, 1807, 2355
TaqII GACCGA 3 cut(s) 70, 436, 1081
TatI WGTACW 6 cut(s) 188, 655, 1329, 1574, 1980, 2241
TfiI GAWTC 5 cut(s) 109, 707, 886, 1124, 1430
Tru1I TTAA 4 cut(s) 1266, 1935, 2036, 2361
Tru9I TTAA 4 cut(s) 1266, 1935, 2036, 2361
TscAI CASTG 2 cut(s) 1246, 2352
TspDTI ATGAA 4 cut(s) 737, 1033, 1077, 1172
TspGWI ACGGA 1 cut(s) 119
TspRI CASTG 2 cut(s) 1246, 2352
VpaK11BI GGWCC 5 cut(s) 284, 345, 357, 1610, 2339
XapI RAATTY 3 cut(s) 864, 1161, 1521
XbaI TCTAGA 1 cut(s) 1687
XceI RCATGY 1 cut(s) 76
XcmI CCANNNNNNNNNTGG 1 cut(s) 367
XmaJI CCTAGG 1 cut(s) 881
XmiI GTMKAC 1 cut(s) 1220
XmnI GAANNNNTTC 2 cut(s) 1138, 1665
XspI CTAG 5 cut(s) 383, 567, 882, 1286, 1688
ZrmI AGTACT 3 cut(s) 190, 1331, 1576
Zsp2I ATGCAT 1 cut(s) 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.