Rh2DG490500

pyrophosphate-energized membrane proton pump

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0005820
Physical Location & Seq
Forward (+)
71044800 .. 71051962
7163 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG490500.1

Sequence Viewer

Length: 2046 bp
ATGCTCATGGGTGGCGATTTGGAGGATGGTAATTTGGGGCCTTACCAAGACAGGCTGAGGACATTTCCAAACATGCGTGGTAAATCTTACAACCCATTGATTTTTCGAATTTTGAGGCGAATAAATGTTCGTGTCCTTTTTGTGATTTTGCTTCTGGCACTTGGAGTGGTCTTTTACATTGGAGCAAGCACTTCTCCTATCATTGTGTTCGTCTTCTCAGTTTGTATTATCAGCTTCCTTCTGGCAATGCACCTTGCCAAATGGGTTCTTGCAAAAGATGAGGGACCTCCGGAGATGGGTCAGATATCAGATGCAATACGTGATGGAGCTGAAGGTTTCTTCAGGACCCAGTATGGGACCATCTCTAAGATGGCATTTTTACTGGCTGCAGTTATCCTTTGCATATACTTATTTCGCACTACGACTCCTCAGCAAGAGTCATCTGGCCTTGGAAGGGTAGCCACTGCATGTATTACTGTAGCTGCATTTCTTTTGGGAGCTTTCTGTTCAGGTATTGCAGGGTATGTCGGGATGTGGGTATCAGTTCGTGCCAATGTTCGAGTCTCTAGTGCTGCGAGACGGTCTGCAAGGGAGGCATTGCAGATAGCTGTTCGTGCTGGTGGTTTTTCTGCTATGATTGTCGTTGGTATGGCTGTAATCGGTATTGCCATCCTGTATTCCACATTTTATGTATGGCTGGGAGTGGATACACCGGGTTCAATGAAGGTTACTGACTTGCCTCTTCTTCTTGTTGGATACGGCTTTGGAGCTTCTTTTGTTGCCTTATTTGCTCAGCTGGGTGGGGGAATATACACAAAAGCAGCTGATGTTGGAGCAGATCTTGTTGGAAAAGTTGAGCAGGGGATTCCTGAAGATGATCCTAGGAATCCTGCTGTGATAGCAGATCTGGTTGGAGATAATGTCGGGGATTGTGCGGCTAGAGGTGCTGATCTTTTTGAAAGTATTGCTGCTGAAATAATCAGTGCTATGATACTTGGGGGAACAATGGCTCAACGTTGTAAAATTGAAGATCCTTCTGGTTTCATCTTGTTTCCTCTGGTTGTTCACTCTTTTGATCTGGTGATTTCATCGGTTGGAATACTTTCAATCAGGGGTACACGAGATTCTGGTGCGAAGGGTTCTATAGAGGATCCAATGACAATTCTTGAGAGAGGATACTCAGTCACAGTAGTTTTAGCTGTTCTGACATTTGGTGCGTCTACCCGATGGTTGTTATACACTGAACAAGCACCGTCTGCGTGGTTTCACTTTGCCTTATGTGGATTAGTTGGCATCATCACTGCATATATTTTTGTGTGGATAACCAAGTACTATACAGACTACAAGTATGAGCCTGTACGCACATTAGCTCTTGCGAGCTCCACAGGTCATGGGACTAATATAATCGCTGGCGTCAGTTTGGGTCTGGAATCAACAGCTCTTCCTGTTCTTGTCATTAGCGTAGCTATTGTTTCAGCTTACTGGCTGGGCCAGACCTCTGGACTCGTGGACGAAAATGGTGTTCCTACTGGCGGGCTGTTTGGCACAGCTGTAGCAACAATGGGCATGCTAAGTACTGCTGCTTATGTTCTCACGATGGATATGTTTGGTCCAATAGCTGATAATGCTGGTGGAATTGTAGAGATGAGTCAGCAGCCAGAAAGTGTTCGCGAGATCACCGACCTTCTTGATGCAGTAGGAAACACTACAAAAGCTACCACCAAAGGGTTTGCCATTGGATCTGCTGCACTTGCATCTTTTCTTCTGTTTAGTGCTTATATGGATGAGGTAGCTACATTTGCCCGTGAACCTTTCAAGCAGGTTGATATTGCCATTCCAGAAGTTTTTGTTGGCGGATTGTTGGGCTCTATGCTTATTTTCTTATTTAGTGCCTGGGCGTGTTCAGCAGTTGGCCGAACTGCTCAAGAGGTTGTCAGGGAAGTAAGAAGGCAATTTATTGAGAGGCCTGGTATAATGGTTAGTATAAGCTCCCCTAGTGATTTTCATGTAAACCATAACTTTTACAAAGTCAAGCTCTTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
H_PPase

Protein Analysis

681

Amino Acids

72.7

Weight (kDa)

5.57

Isoelectric Point (pI)

31.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 76 - 664 2e-192 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1810
AccI GTMKAC 1 cut(s) 1220
AccII CGCG 1 cut(s) 1671
AccIII TCCGGA 1 cut(s) 289
AciI CCGC 3 cut(s) 935, 1533, 1854
AclI AACGTT 1 cut(s) 1015
AclWI GGATC 5 cut(s) 872, 1025, 1145, 1158, 1747
AcoI YGGCCR 1 cut(s) 1912
AcsI RAATTY 1 cut(s) 108
AcuI CTGAAG 3 cut(s) 325, 351, 891
AcyI GRCGYC 1 cut(s) 1413
AfaI GTAC 4 cut(s) 1117, 1331, 1359, 1576
AfiI CCNNNNNNNGG 5 cut(s) 296, 354, 454, 1532, 1725
AgsI TTSAA 5 cut(s) 720, 959, 1028, 1107, 1816
AjnI CCWGG 2 cut(s) 1892, 1966
AjuI GAANNNNNNNTTGG 2 cut(s) 1833, 1865
Alw21I GWGCWC 1 cut(s) 1382
Alw26I GTCTC 2 cut(s) 568, 571
AlwI GGATC 5 cut(s) 872, 1025, 1145, 1158, 1747
Aor13HI TCCGGA 1 cut(s) 289
AoxI GGCC 5 cut(s) 38, 445, 1489, 1912, 1964
ApeKI GCWGC 8 cut(s) 386, 482, 572, 821, 968, 1580, 1654, 1745
ApoI RAATTY 1 cut(s) 108
Asp700I GAANNNNTTC 2 cut(s) 1102, 1665
AspA2I CCTAGG 1 cut(s) 881
AspS9I GGNCC 6 cut(s) 38, 284, 345, 357, 1489, 1610
AsuC2I CCSGG 1 cut(s) 714
AsuHPI GGTGA 2 cut(s) 1093, 1669
AsuII TTCGAA 1 cut(s) 106
AvaII GGWCC 4 cut(s) 284, 345, 357, 1610
AvrII CCTAGG 1 cut(s) 881
BamHI GGATCC 1 cut(s) 1150
BanII GRGCYC 2 cut(s) 1382, 1868
BauI CACGAG 2 cut(s) 1119, 1505
BbsI GAAGAC 1 cut(s) 205
Bbv12I GWGCWC 1 cut(s) 1382
BbvCI CCTCAGC 2 cut(s) 56, 429
BbvI GCAGC 8 cut(s) 373, 469, 559, 833, 955, 1567, 1666, 1732
BccI CCATC 8 cut(s) 20, 289, 317, 364, 368, 677, 1221, 1591
BceAI ACGGC 1 cut(s) 775
BciT130I CCWGG 2 cut(s) 1894, 1968
BciVI GTATCC 3 cut(s) 700, 749, 1169
BcnI CCSGG 1 cut(s) 714
BcoDI GTCTC 2 cut(s) 568, 571
BfaI CTAG 4 cut(s) 567, 882, 939, 1995
BfmI CTRYAG 4 cut(s) 387, 477, 1143, 1551
BfuAI ACCTGC 1 cut(s) 1810
BfuI GTATCC 3 cut(s) 700, 749, 1169
BglII AGATCT 2 cut(s) 838, 904
BisI GCNGC 9 cut(s) 387, 483, 573, 822, 936, 969, 1581, 1655, 1746
BlnI CCTAGG 1 cut(s) 881
BlpI GCTNAGC 1 cut(s) 792
BlsI GCNGC 9 cut(s) 388, 484, 574, 823, 937, 970, 1582, 1656, 1747
BmcAI AGTACT 2 cut(s) 1331, 1576
Bme1390I CCNGG 3 cut(s) 714, 1894, 1968
Bme18I GGWCC 4 cut(s) 284, 345, 357, 1610
BmgT120I GGNCC 6 cut(s) 38, 284, 345, 357, 1489, 1610
BmiI GGNNCC 5 cut(s) 39, 285, 347, 358, 1152
BmrFI CCNGG 3 cut(s) 714, 1894, 1968
BmrI ACTGGG 1 cut(s) 343
BmsI GCATC 4 cut(s) 301, 1302, 1681, 1763
BmuI ACTGGG 1 cut(s) 343
BpiI GAAGAC 1 cut(s) 205
Bpu10I CCTNAGC 2 cut(s) 56, 429
Bpu1102I GCTNAGC 1 cut(s) 792
Bpu14I TTCGAA 1 cut(s) 106
BpuEI CTTGAG 2 cut(s) 1187, 1908
BpuMI CCSGG 1 cut(s) 714
BsaAI YACGTR 1 cut(s) 320
BsaHI GRCGYC 1 cut(s) 1413
BsaJI CCNNGG 3 cut(s) 448, 881, 1893
BsaWI WCCGGW 1 cut(s) 289
BsaXI ACNNNNNCTCC 4 cut(s) 409, 439, 906, 936
Bsc4I CCNNNNNNNGG 5 cut(s) 296, 354, 454, 1532, 1725
Bse1I ACTGG 4 cut(s) 349, 387, 1487, 1534
Bse3DI GCAATG 2 cut(s) 252, 596
BseAI TCCGGA 1 cut(s) 289
BseBI CCWGG 2 cut(s) 1894, 1968
BseDI CCNNGG 3 cut(s) 448, 881, 1893
BseGI GGATG 4 cut(s) 31, 537, 669, 1789
BseLI CCNNNNNNNGG 5 cut(s) 296, 354, 454, 1532, 1725
BseMI GCAATG 2 cut(s) 252, 596
BseMII CTCAG 5 cut(s) 47, 231, 443, 806, 1194
BseNI ACTGG 4 cut(s) 349, 387, 1487, 1534
BseRI GAGGAG 1 cut(s) 417
BseXI GCAGC 8 cut(s) 373, 469, 559, 833, 955, 1567, 1666, 1732
BseYI CCCAGC 3 cut(s) 697, 796, 1486
BsgI GTGCAG 1 cut(s) 1731
Bsh1236I CGCG 1 cut(s) 1671
BshFI GGCC 5 cut(s) 40, 447, 1491, 1914, 1966
BsiHKAI GWGCWC 1 cut(s) 1382
BsiSI CCGG 2 cut(s) 290, 713
BslFI GGGAC 3 cut(s) 297, 370, 1408
BslI CCNNNNNNNGG 5 cut(s) 296, 354, 454, 1532, 1725
BsmAI GTCTC 2 cut(s) 568, 571
BsmBI CGTCTC 1 cut(s) 571
BsmFI GGGAC 3 cut(s) 297, 370, 1408
BsnI GGCC 5 cut(s) 40, 447, 1491, 1914, 1966
Bsp119I TTCGAA 1 cut(s) 106
Bsp1286I GDGCHC 2 cut(s) 1382, 1868
Bsp13I TCCGGA 1 cut(s) 289
Bsp143I GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
Bsp1720I GCTNAGC 1 cut(s) 792
Bsp68I TCGCGA 1 cut(s) 1671
BspACI CCGC 3 cut(s) 935, 1533, 1854
BspANI GGCC 5 cut(s) 40, 447, 1491, 1914, 1966
BspCNI CTCAG 5 cut(s) 48, 230, 442, 805, 1193
BspEI TCCGGA 1 cut(s) 289
BspFNI CGCG 1 cut(s) 1671
BspHI TCATGA 1 cut(s) 2042
BspLI GGNNCC 5 cut(s) 39, 285, 347, 358, 1152
BspMAI CTGCAG 1 cut(s) 391
BspMI ACCTGC 1 cut(s) 1810
BspPI GGATC 5 cut(s) 872, 1025, 1145, 1158, 1747
BspQI GCTCTTC 1 cut(s) 1446
BspT104I TTCGAA 1 cut(s) 106
BsrDI GCAATG 2 cut(s) 252, 596
BsrI ACTGG 4 cut(s) 349, 387, 1487, 1534
BssECI CCNNGG 3 cut(s) 448, 881, 1893
BssMI GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
BssNI GRCGYC 1 cut(s) 1413
BssSI CACGAG 2 cut(s) 1119, 1505
BssT1I CCWWGG 2 cut(s) 448, 881
Bst2BI CACGAG 2 cut(s) 1119, 1505
Bst2UI CCWGG 2 cut(s) 1894, 1968
Bst4CI ACNGT 4 cut(s) 478, 582, 1189, 1254
Bst6I CTCTTC 2 cut(s) 747, 1446
BstACI GRCGYC 1 cut(s) 1413
BstAPI GCANNNNNTGC 1 cut(s) 1256
BstBAI YACGTR 1 cut(s) 320
BstBI TTCGAA 1 cut(s) 106
BstC8I GCNNGC 5 cut(s) 187, 1378, 1411, 1535, 1568
BstDEI CTNAG 7 cut(s) 56, 217, 366, 429, 792, 1180, 1571
BstF5I GGATG 4 cut(s) 31, 537, 669, 1789
BstFNI CGCG 1 cut(s) 1671
BstKTI GATC 9 cut(s) 841, 880, 907, 952, 1033, 1078, 1153, 1677, 1742
BstMAI GTCTC 2 cut(s) 568, 571
BstMBI GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
BstNI CCWGG 2 cut(s) 1894, 1968
BstNSI RCATGY 3 cut(s) 76, 471, 1570
BstSCI CCNGG 3 cut(s) 712, 1892, 1966
BstSFI CTRYAG 4 cut(s) 387, 477, 1143, 1551
BstUI CGCG 1 cut(s) 1671
BstV1I GCAGC 8 cut(s) 373, 469, 559, 833, 955, 1567, 1666, 1732
BstV2I GAAGAC 1 cut(s) 205
BstX2I RGATCY 5 cut(s) 838, 904, 1030, 1150, 1739
BstXI CCANNNNNNTGG 1 cut(s) 1499
BstYI RGATCY 5 cut(s) 838, 904, 1030, 1150, 1739
BsuI GTATCC 3 cut(s) 700, 749, 1169
BsuRI GGCC 5 cut(s) 40, 447, 1491, 1914, 1966
BtsCI GGATG 4 cut(s) 31, 537, 669, 1789
BtsI GCAGTG 2 cut(s) 462, 1299
BtsIMutI CAGTG 4 cut(s) 462, 988, 1239, 1299
BtuMI TCGCGA 1 cut(s) 1671
BveI ACCTGC 1 cut(s) 1810
Cac8I GCNNGC 5 cut(s) 187, 1378, 1411, 1535, 1568
CciI TCATGA 1 cut(s) 2042
Cfr13I GGNCC 6 cut(s) 38, 284, 345, 357, 1489, 1610
CseI GACGC 2 cut(s) 1206, 1402
Csp6I GTAC 4 cut(s) 1116, 1330, 1358, 1575
CviAII CATG 7 cut(s) 7, 73, 468, 1391, 1567, 2006, 2043
CviQI GTAC 4 cut(s) 1116, 1330, 1358, 1575
DdeI CTNAG 7 cut(s) 56, 217, 366, 429, 792, 1180, 1571
DpnI GATC 9 cut(s) 840, 879, 906, 951, 1032, 1077, 1152, 1676, 1741
DpnII GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
EaeI YGGCCR 1 cut(s) 1912
Eam1104I CTCTTC 2 cut(s) 747, 1446
EarI CTCTTC 2 cut(s) 747, 1446
EciI GGCGGA 1 cut(s) 1869
Ecl136II GAGCTC 1 cut(s) 1380
Eco130I CCWWGG 2 cut(s) 448, 881
Eco147I AGGCCT 1 cut(s) 1966
Eco24I GRGCYC 2 cut(s) 1382, 1868
Eco32I GATATC 1 cut(s) 306
Eco47I GGWCC 4 cut(s) 284, 345, 357, 1610
Eco53kI GAGCTC 1 cut(s) 1380
Eco57I CTGAAG 3 cut(s) 325, 351, 891
EcoICRI GAGCTC 1 cut(s) 1380
EcoO109I RGGNCCY 3 cut(s) 38, 284, 345
EcoRII CCWGG 2 cut(s) 1892, 1966
EcoRV GATATC 1 cut(s) 306
EcoT14I CCWWGG 2 cut(s) 448, 881
EcoT38I GRGCYC 2 cut(s) 1382, 1868
ErhI CCWWGG 2 cut(s) 448, 881
Esp3I CGTCTC 1 cut(s) 571
FaeI CATG 7 cut(s) 10, 76, 471, 1394, 1570, 2009, 2046
FaqI GGGAC 3 cut(s) 297, 370, 1408
FatI CATG 7 cut(s) 6, 72, 467, 1390, 1566, 2005, 2042
FauI CCCGC 1 cut(s) 1526
FblI GTMKAC 1 cut(s) 1220
Fnu4HI GCNGC 9 cut(s) 387, 483, 573, 822, 936, 969, 1581, 1655, 1746
FokI GGATG 4 cut(s) 38, 544, 656, 1796
FriOI GRGCYC 2 cut(s) 1382, 1868
Fsp4HI GCNGC 9 cut(s) 387, 483, 573, 822, 936, 969, 1581, 1655, 1746
FspBI CTAG 4 cut(s) 567, 882, 939, 1995
GluI GCNGC 9 cut(s) 387, 483, 573, 822, 936, 969, 1581, 1655, 1746
GsaI CCCAGC 3 cut(s) 701, 800, 1490
HaeIII GGCC 5 cut(s) 40, 447, 1491, 1914, 1966
HapII CCGG 2 cut(s) 290, 713
HgaI GACGC 2 cut(s) 1206, 1402
Hin1I GRCGYC 1 cut(s) 1413
Hin1II CATG 7 cut(s) 10, 76, 471, 1394, 1570, 2009, 2046
HinfI GANTC 9 cut(s) 424, 437, 561, 865, 886, 1124, 1430, 1503, 1648
HpaII CCGG 2 cut(s) 290, 713
HphI GGTGA 2 cut(s) 1093, 1669
Hpy166II GTNNAC 6 cut(s) 1066, 1118, 1221, 1510, 1808, 2011
Hpy188I TCNGA 3 cut(s) 303, 310, 1206
Hpy8I GTNNAC 6 cut(s) 1066, 1118, 1221, 1510, 1808, 2011
HpyAV CCTTC 8 cut(s) 248, 326, 447, 718, 1044, 1129, 1694, 1941
HpyCH4III ACNGT 4 cut(s) 478, 582, 1189, 1254
HpyCH4IV ACGT 2 cut(s) 319, 1015
HpyF3I CTNAG 7 cut(s) 56, 217, 366, 429, 792, 1180, 1571
HpySE526I ACGT 2 cut(s) 319, 1015
Hsp92I GRCGYC 1 cut(s) 1413
Hsp92II CATG 7 cut(s) 10, 76, 471, 1394, 1570, 2009, 2046
Kpn2I TCCGGA 1 cut(s) 289
Kzo9I GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
LguI GCTCTTC 1 cut(s) 1446
LmnI GCTCC 7 cut(s) 182, 326, 497, 767, 833, 1385, 1994
Lsp1109I GCAGC 8 cut(s) 373, 469, 559, 833, 955, 1567, 1666, 1732
LweI GCATC 4 cut(s) 301, 1302, 1681, 1763
MaeI CTAG 4 cut(s) 567, 882, 939, 1995
MaeII ACGT 2 cut(s) 319, 1015
MaeIII GTNAC 2 cut(s) 727, 1183
MalI GATC 9 cut(s) 840, 879, 906, 951, 1032, 1077, 1152, 1676, 1741
MboI GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
MboII GAAGA 8 cut(s) 205, 331, 734, 737, 884, 1040, 1433, 1754
MflI RGATCY 5 cut(s) 838, 904, 1030, 1150, 1739
MhlI GDGCHC 2 cut(s) 1382, 1868
MluCI AATT 6 cut(s) 31, 108, 1023, 1161, 1635, 1952
MlyI GAGTC 5 cut(s) 418, 446, 570, 1497, 1657
MmeI TCCRAC 5 cut(s) 733, 811, 826, 892, 1075
MroI TCCGGA 1 cut(s) 289
MroXI GAANNNNTTC 2 cut(s) 1102, 1665
MspA1I CMGCKG 3 cut(s) 796, 824, 1550
MspI CCGG 2 cut(s) 290, 713
MspR9I CCNGG 3 cut(s) 714, 1894, 1968
MvaI CCWGG 2 cut(s) 1894, 1968
MvnI CGCG 1 cut(s) 1671
NciI CCSGG 1 cut(s) 714
NdeII GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
NlaIII CATG 7 cut(s) 10, 76, 471, 1394, 1570, 2009, 2046
NlaIV GGNNCC 5 cut(s) 39, 285, 347, 358, 1152
NmuCI GTSAC 1 cut(s) 1183
NruI TCGCGA 1 cut(s) 1671
NspI RCATGY 3 cut(s) 76, 471, 1570
NspV TTCGAA 1 cut(s) 106
PaeI GCATGC 1 cut(s) 1570
PagI TCATGA 1 cut(s) 2042
PceI AGGCCT 1 cut(s) 1966
PciSI GCTCTTC 1 cut(s) 1446
PdmI GAANNNNTTC 2 cut(s) 1102, 1665
PfeI GAWTC 4 cut(s) 865, 886, 1124, 1430
PkrI GCNGC 9 cut(s) 388, 484, 574, 823, 937, 970, 1582, 1656, 1747
PleI GAGTC 5 cut(s) 418, 445, 569, 1497, 1656
PpsI GAGTC 5 cut(s) 418, 445, 569, 1497, 1656
Ppu21I YACGTR 1 cut(s) 320
PpuMI RGGWCCY 2 cut(s) 284, 345
Psp124BI GAGCTC 1 cut(s) 1382
Psp1406I AACGTT 1 cut(s) 1015
Psp5II RGGWCCY 2 cut(s) 284, 345
Psp6I CCWGG 2 cut(s) 1892, 1966
PspFI CCCAGC 3 cut(s) 697, 796, 1486
PspGI CCWGG 2 cut(s) 1892, 1966
PspN4I GGNNCC 5 cut(s) 39, 285, 347, 358, 1152
PspPI GGNCC 6 cut(s) 38, 284, 345, 357, 1489, 1610
PspPPI RGGWCCY 2 cut(s) 284, 345
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 5 cut(s) 838, 904, 1030, 1150, 1739
PvuII CAGCTG 3 cut(s) 796, 824, 1550
RruI TCGCGA 1 cut(s) 1671
RsaI GTAC 4 cut(s) 1117, 1331, 1359, 1576
RsaNI GTAC 4 cut(s) 1116, 1330, 1358, 1575
SacI GAGCTC 1 cut(s) 1382
SapI GCTCTTC 1 cut(s) 1446
SatI GCNGC 9 cut(s) 387, 483, 573, 822, 936, 969, 1581, 1655, 1746
Sau3AI GATC 9 cut(s) 838, 877, 904, 949, 1030, 1075, 1150, 1674, 1739
Sau96I GGNCC 6 cut(s) 38, 284, 345, 357, 1489, 1610
ScaI AGTACT 2 cut(s) 1331, 1576
SchI GAGTC 5 cut(s) 418, 446, 570, 1497, 1657
ScrFI CCNGG 3 cut(s) 714, 1894, 1968
SduI GDGCHC 2 cut(s) 1382, 1868
SfaNI GCATC 4 cut(s) 301, 1302, 1681, 1763
SfcI CTRYAG 4 cut(s) 387, 477, 1143, 1551
SfuI TTCGAA 1 cut(s) 106
SinI GGWCC 4 cut(s) 284, 345, 357, 1610
SmlI CTYRAG 2 cut(s) 1166, 1923
SmoI CTYRAG 2 cut(s) 1166, 1923
SphI GCATGC 1 cut(s) 1570
Sse9I AATT 6 cut(s) 31, 108, 1023, 1161, 1635, 1952
SseBI AGGCCT 1 cut(s) 1966
SsiI CCGC 3 cut(s) 935, 1533, 1854
SspMI CTAG 4 cut(s) 567, 882, 939, 1995
SstI GAGCTC 1 cut(s) 1382
StuI AGGCCT 1 cut(s) 1966
StyD4I CCNGG 3 cut(s) 712, 1892, 1966
StyI CCWWGG 2 cut(s) 448, 881
TaaI ACNGT 4 cut(s) 478, 582, 1189, 1254
TaiI ACGT 2 cut(s) 322, 1018
TaqI TCGA 2 cut(s) 106, 559
TasI AATT 6 cut(s) 31, 108, 1023, 1161, 1635, 1952
TatI WGTACW 2 cut(s) 1329, 1574
TauI GCSGC 1 cut(s) 938
TfiI GAWTC 4 cut(s) 865, 886, 1124, 1430
TscAI CASTG 4 cut(s) 469, 988, 1246, 1306
TseFI GTSAC 1 cut(s) 1183
TseI GCWGC 8 cut(s) 386, 482, 572, 821, 968, 1580, 1654, 1745
Tsp45I GTSAC 1 cut(s) 1183
TspDTI ATGAA 4 cut(s) 737, 1033, 1077, 1994
TspRI CASTG 4 cut(s) 469, 988, 1246, 1306
VpaK11BI GGWCC 4 cut(s) 284, 345, 357, 1610
XapI RAATTY 1 cut(s) 108
XceI RCATGY 3 cut(s) 76, 471, 1570
XcmI CCANNNNNNNNNTGG 1 cut(s) 367
XmaJI CCTAGG 1 cut(s) 881
XmiI GTMKAC 1 cut(s) 1220
XmnI GAANNNNTTC 2 cut(s) 1102, 1665
XspI CTAG 4 cut(s) 567, 882, 939, 1995
ZrmI AGTACT 2 cut(s) 1331, 1576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.