pycom17g15400

pyrophosphate-energized membrane proton pump

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
13415634 .. 13418964
3331 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g15400.3

Sequence Viewer

Length: 1422 bp
ATGATTCTTGGGGGAACGATGGCTCAACGTTGTAAAATCGAAGATGCATCTGGTTTCATCTTGTTTCCTCTGGTTGTTCACTCTTTTGATCTGGTGATTTCATCAGTTGGAATATTCTCAATTAGAGGTACACGTGATTCCAGTGGAAAGGCTTCTTCCGAGGATCCAATGAAAATTCTACAGAGAGGATATTCTGTTACAATACTCTTGGCTGTTCTGACATTTGGTGCGTCTACGCGATGGCTGCTTTATACTGAGCAAGCACCATCTGCGTGGTTTAACTTTGCCTTGTGTGGGCTAGTTGGCATCATCACAGCATATGTCTTCGTCTTTATCACCCAATACTATACGGACTACAAACACGAGCCTGTACGCACATTAGCTCTTGCAAGCTCCACAGGTCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTTGAATCAACTGCTCTTCCAGTTCTTGTCATTAGTGTATCTATTATCTCAGCTTACTGGCTGGGCCAGACCTCTGGCCTTATAGACGAACATGGAATTCCAACTGGTGGGCTGTTTGGCACAGCTGTAGCAACAATGGGAATGCTCAGTACTGCTGCATATGTTCTCACTATGGATATGTTTGGTCCAATAGCTGATAATGCTGGTGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTTCGGGAGATCGATCATGTTCTAGACGCAGTAGGAAACACTACAAAAGCTACCACTAAAGGATTTGCCATAGGATCTGCTGCACTTGCATCTTTTCTTCTGTTTAGTGCTTATATGGACGAGGTTGCTGCATTTGCACGTGAACCTTTCAAACAGGTTGATATTGCCATTCCAGAAGTTTTTGTTGGCGGATTGTTGGGCTCTATGCTGATATTTCTATTTAGCGCGTGGGCCTGTTCAGCAGTTGGGCGAACTGCACAAGAGGTTGTTAAGGAAGTAAGGCGGCAATTTATTGAGAGGCCTGGGATAATGGAGTACAAGGAGAAGCCAGATTATGCTCGTTGTGTTGCTATTGTAGCATCTGCATCTTTAAGGGAGATGATAAAACCTGGTGCCTTGGCTATTATTTCACCTATAGCTGTTGGTATTGTGTTCCGGATCTTTGGATACTACAATGGGCAACCTCTACTTGGTGCTAAAGTTGTGGCTTCCATGCTGATGTTTGCAACTGTTTCCGGTATTCTTATGGCACTTTTCCTCAACACAGCCGGAGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACAGGGGTTCTCGGTGGCAAGGGAAGTGATTGCCATAAGGCTGCAGTTACAGGAGATACTGTGGGTGACCCATTTAAAGACACAGCCGGACCTTCGCTGCACGTTCTCATCAAAATGCTTGCAACTATAACGCTGGTTATGGCTCCGGTCTTTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

474

Amino Acids

50.24

Weight (kDa)

6.01

Isoelectric Point (pI)

29.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1070, 1232
AccB7I CCANNNNNTGG 1 cut(s) 545
AccI GTMKAC 1 cut(s) 233
AccII CGCG 2 cut(s) 238, 905
AccIII TCCGGA 1 cut(s) 1113
AciI CCGC 2 cut(s) 867, 961
AclI AACGTT 1 cut(s) 28
AclWI GGATC 4 cut(s) 158, 171, 760, 1124
AcsI RAATTY 2 cut(s) 174, 534
AcvI CACGTG 2 cut(s) 134, 818
AfaI GTAC 5 cut(s) 130, 372, 589, 995, 1256
AfiI CCNNNNNNNGG 3 cut(s) 294, 545, 1148
AflIII ACRYGT 1 cut(s) 131
AgsI TTSAA 2 cut(s) 443, 829
AjnI CCWGG 3 cut(s) 979, 1066, 1235
AjuI GAANNNNNNNTTGG 2 cut(s) 846, 878
AluBI AGCT 7 cut(s) 383, 393, 491, 563, 632, 728, 1097
AluI AGCT 7 cut(s) 383, 393, 491, 563, 632, 728, 1097
Alw26I GTCTC 1 cut(s) 1256
AlwI GGATC 4 cut(s) 158, 171, 760, 1124
Aor13HI TCCGGA 1 cut(s) 1113
AoxI GGCC 4 cut(s) 502, 514, 909, 977
ApeKI GCWGC 7 cut(s) 244, 593, 667, 758, 806, 1304, 1360
ApoI RAATTY 2 cut(s) 174, 534
Asp700I GAANNNNTTC 2 cut(s) 151, 678
AspLEI GCGC 1 cut(s) 905
AspS9I GGNCC 4 cut(s) 502, 623, 909, 1352
AsuHPI GGTGA 4 cut(s) 106, 328, 1080, 1340
AvaII GGWCC 2 cut(s) 623, 1352
BamHI GGATCC 1 cut(s) 163
BanI GGYRCC 2 cut(s) 1070, 1232
BanII GRGCYC 1 cut(s) 881
BauI CACGAG 1 cut(s) 362
BbrPI CACGTG 2 cut(s) 134, 818
BbsI GAAGAC 1 cut(s) 316
BbvI GCAGC 7 cut(s) 231, 580, 679, 745, 793, 1291, 1347
BccI CCATC 3 cut(s) 13, 234, 274
BcgI CGANNNNNNTGC 2 cut(s) 788, 822
BciT130I CCWGG 3 cut(s) 981, 1068, 1237
BciVI GTATCC 1 cut(s) 1118
BcoDI GTCTC 1 cut(s) 1256
BfaI CTAG 2 cut(s) 299, 701
BfmI CTRYAG 4 cut(s) 179, 564, 1092, 1305
BfuI GTATCC 1 cut(s) 1118
BisI GCNGC 8 cut(s) 245, 594, 668, 759, 807, 962, 1305, 1361
BlsI GCNGC 8 cut(s) 246, 595, 669, 760, 808, 963, 1306, 1362
BmcAI AGTACT 1 cut(s) 589
Bme1390I CCNGG 3 cut(s) 981, 1068, 1237
Bme18I GGWCC 2 cut(s) 623, 1352
BmgT120I GGNCC 4 cut(s) 502, 623, 909, 1352
BmiI GGNNCC 4 cut(s) 165, 1072, 1234, 1407
BmrFI CCNGG 3 cut(s) 981, 1068, 1237
BmsI GCATC 6 cut(s) 34, 56, 315, 776, 1046, 1052
BpiI GAAGAC 1 cut(s) 316
BpmI CTGGAG 1 cut(s) 444
Bsa29I ATCGAT 1 cut(s) 690
BsaAI YACGTR 2 cut(s) 134, 818
BsaJI CCNNGG 4 cut(s) 159, 980, 1074, 1236
BsaWI WCCGGW 3 cut(s) 1113, 1193, 1408
BsaXI ACNNNNNCTCC 2 cut(s) 1308, 1338
Bsc4I CCNNNNNNNGG 3 cut(s) 294, 545, 1148
Bse1I ACTGG 4 cut(s) 141, 458, 500, 547
BseAI TCCGGA 1 cut(s) 1113
BseBI CCWGG 3 cut(s) 981, 1068, 1237
BseCI ATCGAT 1 cut(s) 690
BseDI CCNNGG 4 cut(s) 159, 980, 1074, 1236
BseLI CCNNNNNNNGG 3 cut(s) 294, 545, 1148
BseMII CTCAG 3 cut(s) 246, 501, 598
BseNI ACTGG 4 cut(s) 141, 458, 500, 547
BseXI GCAGC 7 cut(s) 231, 580, 679, 745, 793, 1291, 1347
BseYI CCCAGC 1 cut(s) 499
BsgI GTGCAG 3 cut(s) 744, 918, 1346
Bsh1236I CGCG 2 cut(s) 238, 905
BshFI GGCC 4 cut(s) 504, 516, 911, 979
BshNI GGYRCC 2 cut(s) 1070, 1232
BshVI ATCGAT 1 cut(s) 690
BsiSI CCGG 5 cut(s) 1114, 1194, 1227, 1350, 1409
BslFI GGGAC 1 cut(s) 421
BslI CCNNNNNNNGG 3 cut(s) 294, 545, 1148
BsmAI GTCTC 1 cut(s) 1256
BsmFI GGGAC 1 cut(s) 421
BsmI GAATGC 1 cut(s) 585
BsnI GGCC 4 cut(s) 504, 516, 911, 979
Bsp1286I GDGCHC 1 cut(s) 881
Bsp13I TCCGGA 1 cut(s) 1113
Bsp143I GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
BspACI CCGC 2 cut(s) 867, 961
BspANI GGCC 4 cut(s) 504, 516, 911, 979
BspCNI CTCAG 3 cut(s) 247, 500, 597
BspDI ATCGAT 1 cut(s) 690
BspEI TCCGGA 1 cut(s) 1113
BspFNI CGCG 2 cut(s) 238, 905
BspLI GGNNCC 4 cut(s) 165, 1072, 1234, 1407
BspMAI CTGCAG 1 cut(s) 1309
BspPI GGATC 4 cut(s) 158, 171, 760, 1124
BspQI GCTCTTC 1 cut(s) 459
BspT107I GGYRCC 2 cut(s) 1070, 1232
BsrI ACTGG 4 cut(s) 141, 458, 500, 547
BssECI CCNNGG 4 cut(s) 159, 980, 1074, 1236
BssMI GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
BssSI CACGAG 1 cut(s) 362
BssT1I CCWWGG 1 cut(s) 1074
Bst2BI CACGAG 1 cut(s) 362
Bst2UI CCWGG 3 cut(s) 981, 1068, 1237
Bst4CI ACNGT 2 cut(s) 1189, 1324
Bst6I CTCTTC 1 cut(s) 459
BstAPI GCANNNNNTGC 1 cut(s) 269
BstBAI YACGTR 2 cut(s) 134, 818
BstC8I GCNNGC 3 cut(s) 261, 391, 1383
BstDEI CTNAG 3 cut(s) 255, 487, 584
BstEII GGTNACC 1 cut(s) 1328
BstFNI CGCG 2 cut(s) 238, 905
BstHHI GCGC 1 cut(s) 905
BstKTI GATC 6 cut(s) 91, 166, 690, 694, 755, 1119
BstMAI GTCTC 1 cut(s) 1256
BstMBI GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
BstMWI GCNNNNNNNGC 8 cut(s) 244, 269, 638, 764, 812, 917, 1034, 1232
BstNI CCWGG 3 cut(s) 981, 1068, 1237
BstPI GGTNACC 1 cut(s) 1328
BstSCI CCNGG 3 cut(s) 979, 1066, 1235
BstSFI CTRYAG 4 cut(s) 179, 564, 1092, 1305
BstUI CGCG 2 cut(s) 238, 905
BstV1I GCAGC 7 cut(s) 231, 580, 679, 745, 793, 1291, 1347
BstV2I GAAGAC 1 cut(s) 316
BstX2I RGATCY 3 cut(s) 163, 752, 1116
BstXI CCANNNNNNTGG 2 cut(s) 273, 512
BstYI RGATCY 3 cut(s) 163, 752, 1116
Bsu15I ATCGAT 1 cut(s) 690
BsuI GTATCC 1 cut(s) 1118
BsuRI GGCC 4 cut(s) 504, 516, 911, 979
BsuTUI ATCGAT 1 cut(s) 690
BtgZI GCGATG 1 cut(s) 253
BtsIMutI CAGTG 1 cut(s) 148
Cac8I GCNNGC 3 cut(s) 261, 391, 1383
CfoI GCGC 1 cut(s) 905
Cfr13I GGNCC 4 cut(s) 502, 623, 909, 1352
ClaI ATCGAT 1 cut(s) 690
CseI GACGC 2 cut(s) 219, 713
CsiI ACCWGGT 1 cut(s) 1066
Csp6I GTAC 5 cut(s) 129, 371, 588, 994, 1255
CviAII CATG 4 cut(s) 404, 530, 695, 1171
CviQI GTAC 5 cut(s) 129, 371, 588, 994, 1255
DdeI CTNAG 3 cut(s) 255, 487, 584
DpnI GATC 6 cut(s) 90, 165, 689, 693, 754, 1118
DpnII GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
DraI TTTAAA 1 cut(s) 1339
Eam1104I CTCTTC 1 cut(s) 459
EarI CTCTTC 1 cut(s) 459
EciI GGCGGA 1 cut(s) 882
Eco130I CCWWGG 1 cut(s) 1074
Eco147I AGGCCT 1 cut(s) 979
Eco24I GRGCYC 1 cut(s) 881
Eco47I GGWCC 2 cut(s) 623, 1352
Eco72I CACGTG 2 cut(s) 134, 818
Eco91I GGTNACC 1 cut(s) 1328
EcoO65I GGTNACC 1 cut(s) 1328
EcoRI GAATTC 1 cut(s) 534
EcoRII CCWGG 3 cut(s) 979, 1066, 1235
EcoT14I CCWWGG 1 cut(s) 1074
EcoT22I ATGCAT 1 cut(s) 49
EcoT38I GRGCYC 1 cut(s) 881
ErhI CCWWGG 1 cut(s) 1074
FaeI CATG 4 cut(s) 407, 533, 698, 1174
FaqI GGGAC 1 cut(s) 421
FatI CATG 4 cut(s) 403, 529, 694, 1170
FauNDI CATATG 2 cut(s) 319, 598
FblI GTMKAC 1 cut(s) 233
Fnu4HI GCNGC 8 cut(s) 245, 594, 668, 759, 807, 962, 1305, 1361
FriOI GRGCYC 1 cut(s) 881
Fsp4HI GCNGC 8 cut(s) 245, 594, 668, 759, 807, 962, 1305, 1361
FspBI CTAG 2 cut(s) 299, 701
GlaI GCGC 1 cut(s) 904
GluI GCNGC 8 cut(s) 245, 594, 668, 759, 807, 962, 1305, 1361
GsaI CCCAGC 1 cut(s) 503
GsuI CTGGAG 1 cut(s) 444
HaeIII GGCC 4 cut(s) 504, 516, 911, 979
HapII CCGG 5 cut(s) 1114, 1194, 1227, 1350, 1409
HgaI GACGC 2 cut(s) 219, 713
HhaI GCGC 1 cut(s) 905
Hin1II CATG 4 cut(s) 407, 533, 698, 1174
Hin6I GCGC 1 cut(s) 903
HinP1I GCGC 1 cut(s) 903
HinfI GANTC 5 cut(s) 4, 137, 426, 443, 661
HpaII CCGG 5 cut(s) 1114, 1194, 1227, 1350, 1409
HphI GGTGA 4 cut(s) 106, 328, 1080, 1340
Hpy166II GTNNAC 4 cut(s) 79, 131, 234, 821
Hpy188I TCNGA 3 cut(s) 160, 219, 1421
Hpy188III TCNNGA 5 cut(s) 440, 683, 701, 851, 1114
Hpy8I GTNNAC 4 cut(s) 79, 131, 234, 821
HpyAV CCTTC 1 cut(s) 1365
HpyCH4III ACNGT 2 cut(s) 1189, 1324
HpyCH4IV ACGT 4 cut(s) 28, 133, 817, 1365
HpyF10VI GCNNNNNNNGC 8 cut(s) 244, 269, 638, 764, 812, 917, 1034, 1232
HpyF3I CTNAG 3 cut(s) 255, 487, 584
HpySE526I ACGT 4 cut(s) 28, 133, 817, 1365
Hsp92II CATG 4 cut(s) 407, 533, 698, 1174
HspAI GCGC 1 cut(s) 903
Kpn2I TCCGGA 1 cut(s) 1113
Kzo9I GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
LguI GCTCTTC 1 cut(s) 459
LmnI GCTCC 2 cut(s) 398, 1411
Lsp1109I GCAGC 7 cut(s) 231, 580, 679, 745, 793, 1291, 1347
LweI GCATC 6 cut(s) 34, 56, 315, 776, 1046, 1052
MabI ACCWGGT 1 cut(s) 1066
MaeI CTAG 2 cut(s) 299, 701
MaeII ACGT 4 cut(s) 28, 133, 817, 1365
MaeIII GTNAC 3 cut(s) 196, 1309, 1328
MalI GATC 6 cut(s) 90, 165, 689, 693, 754, 1118
MboI GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
MboII GAAGA 5 cut(s) 53, 147, 316, 446, 767
MflI RGATCY 3 cut(s) 163, 752, 1116
MhlI GDGCHC 1 cut(s) 881
MluCI AATT 6 cut(s) 120, 174, 417, 534, 648, 965
MlyI GAGTC 2 cut(s) 435, 670
MmeI TCCRAC 2 cut(s) 88, 563
Mph1103I ATGCAT 1 cut(s) 49
MroI TCCGGA 1 cut(s) 1113
MroXI GAANNNNTTC 2 cut(s) 151, 678
MseI TTAA 4 cut(s) 279, 948, 1049, 1338
MslI CAYNNNNRTG 3 cut(s) 271, 1175, 1376
MspA1I CMGCKG 1 cut(s) 563
MspI CCGG 5 cut(s) 1114, 1194, 1227, 1350, 1409
MspR9I CCNGG 3 cut(s) 981, 1068, 1237
Mva1269I GAATGC 1 cut(s) 585
MvaI CCWGG 3 cut(s) 981, 1068, 1237
MvnI CGCG 2 cut(s) 238, 905
MwoI GCNNNNNNNGC 8 cut(s) 244, 269, 638, 764, 812, 917, 1034, 1232
NdeI CATATG 2 cut(s) 319, 598
NdeII GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
NlaIII CATG 4 cut(s) 407, 533, 698, 1174
NlaIV GGNNCC 4 cut(s) 165, 1072, 1234, 1407
NmuCI GTSAC 1 cut(s) 1328
NsiI ATGCAT 1 cut(s) 49
PceI AGGCCT 1 cut(s) 979
PciSI GCTCTTC 1 cut(s) 459
PctI GAATGC 1 cut(s) 585
PdmI GAANNNNTTC 2 cut(s) 151, 678
PfeI GAWTC 3 cut(s) 4, 137, 443
PflMI CCANNNNNTGG 1 cut(s) 545
PkrI GCNGC 8 cut(s) 246, 595, 669, 760, 808, 963, 1306, 1362
PleI GAGTC 2 cut(s) 434, 669
PmaCI CACGTG 2 cut(s) 134, 818
PmlI CACGTG 2 cut(s) 134, 818
PpsI GAGTC 2 cut(s) 434, 669
Ppu21I YACGTR 2 cut(s) 134, 818
Psp1406I AACGTT 1 cut(s) 28
Psp6I CCWGG 3 cut(s) 979, 1066, 1235
PspCI CACGTG 2 cut(s) 134, 818
PspEI GGTNACC 1 cut(s) 1328
PspFI CCCAGC 1 cut(s) 499
PspGI CCWGG 3 cut(s) 979, 1066, 1235
PspN4I GGNNCC 4 cut(s) 165, 1072, 1234, 1407
PspPI GGNCC 4 cut(s) 502, 623, 909, 1352
PstI CTGCAG 1 cut(s) 1309
PsuI RGATCY 3 cut(s) 163, 752, 1116
PvuII CAGCTG 1 cut(s) 563
RsaI GTAC 5 cut(s) 130, 372, 589, 995, 1256
RsaNI GTAC 5 cut(s) 129, 371, 588, 994, 1255
RseI CAYNNNNRTG 3 cut(s) 271, 1175, 1376
SapI GCTCTTC 1 cut(s) 459
SaqAI TTAA 4 cut(s) 279, 948, 1049, 1338
SatI GCNGC 8 cut(s) 245, 594, 668, 759, 807, 962, 1305, 1361
Sau3AI GATC 6 cut(s) 88, 163, 687, 691, 752, 1116
Sau96I GGNCC 4 cut(s) 502, 623, 909, 1352
ScaI AGTACT 1 cut(s) 589
SchI GAGTC 2 cut(s) 435, 670
ScrFI CCNGG 3 cut(s) 981, 1068, 1237
SduI GDGCHC 1 cut(s) 881
SexAI ACCWGGT 1 cut(s) 1066
SfaNI GCATC 6 cut(s) 34, 56, 315, 776, 1046, 1052
SfcI CTRYAG 4 cut(s) 179, 564, 1092, 1305
SinI GGWCC 2 cut(s) 623, 1352
SmiMI CAYNNNNRTG 3 cut(s) 271, 1175, 1376
Sse9I AATT 6 cut(s) 120, 174, 417, 534, 648, 965
SseBI AGGCCT 1 cut(s) 979
SsiI CCGC 2 cut(s) 867, 961
SspI AATATT 1 cut(s) 114
SspMI CTAG 2 cut(s) 299, 701
StuI AGGCCT 1 cut(s) 979
StyD4I CCNGG 3 cut(s) 979, 1066, 1235
StyI CCWWGG 1 cut(s) 1074
TaaI ACNGT 2 cut(s) 1189, 1324
TaiI ACGT 4 cut(s) 31, 136, 820, 1368
TaqI TCGA 2 cut(s) 39, 690
TasI AATT 6 cut(s) 120, 174, 417, 534, 648, 965
TatI WGTACW 3 cut(s) 587, 993, 1254
TauI GCSGC 1 cut(s) 964
TfiI GAWTC 3 cut(s) 4, 137, 443
Tru1I TTAA 4 cut(s) 279, 948, 1049, 1338
Tru9I TTAA 4 cut(s) 279, 948, 1049, 1338
TscAI CASTG 1 cut(s) 148
TseFI GTSAC 1 cut(s) 1328
TseI GCWGC 7 cut(s) 244, 593, 667, 758, 806, 1304, 1360
Tsp45I GTSAC 1 cut(s) 1328
TspDTI ATGAA 3 cut(s) 46, 90, 185
TspGWI ACGGA 1 cut(s) 365
TspRI CASTG 1 cut(s) 148
Van91I CCANNNNNTGG 1 cut(s) 545
VpaK11BI GGWCC 2 cut(s) 623, 1352
XapI RAATTY 2 cut(s) 174, 534
XbaI TCTAGA 1 cut(s) 700
XmiI GTMKAC 1 cut(s) 233
XmnI GAANNNNTTC 2 cut(s) 151, 678
XspI CTAG 2 cut(s) 299, 701
ZrmI AGTACT 1 cut(s) 589
Zsp2I ATGCAT 1 cut(s) 49
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.