Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002345.1

Orthogroup ID

OG0005820

Physical Location & Seq

Genomic Coordinates Forward (+)

25646 .. 32149

Gene Structure 6504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002345.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2640 bp

atgctcatgggtggcgatttggaggatggtaatttggggccttaccaagacaggctgaggacatttccaaacatgcgtggtaaatcttacaacccattgatttttcgaattttgaggcgaataaatgttcgtgtcctttttgtgattttgcttctggcacttggagtggtcttttacattggagcaagcacttctcctatcattgtgttcgtcttctcagtttgtattatcagcttccttctggcaatgcaccttgccaaatgggttcttgcaaaagatgagggacctccggagatgggtcagatatcagatgcaatacgtgatggagctgaaggtttcttcaggacccagtatgggaccatctctaagatggcatttttactggctgcggttatcctttgcatatacttatttcgcactacgactcctcagcaagagtcatctggccttggaagggtagccactgcatgtattactgtagctgcatttcttttgggagctttctgttcaggtattgcagggtatgtcgggatgtgggtatcagttcgtgccaatgttcgagtctctagtgctgcgagacggtctgcaagggaggcattgcagatagctgttcgtgctggtggtttttctgctatgactgtcgttggtatggctgtaatcggtattgccatcctgtattccacattttatgtctggctgggagtggatacaccgggttcaatgaaggttactgacttgcctcttcttcttgttggatacggctttggagcttcttttgttgccttatttgctcagctgggtgggggaatatacacaaaagcagctgatgttggagcagatcttgttggaaaagttgagcaggggattcctgaagatgatcctaggaatcctgctgtgatagcagatctggttggagataatgtcggggattgtgcggctagaggtgctgatctttttgaaagtattgctgctgaaataatcagtgctatgatacttgggggaacaatggctcaacgttgtaaaattgaagatccttctggtttcatcttgtttcctctggttgttcactcttttgatctggtgatttcatcggttggaatactttcaatcaggggtacacgagattctggtgcgaagggttctatagaggatccaatgacaattcttgagagaggatactcagtcacagtagttttagctgttctgacatttggtgcgtctacccgatggttgttatacactgaacaagcaccgtctgcgtggtttcactttgccttatgtggattagttggcatcatcactgcatatatttttgtgtggataaccaagtactatacagactacaagtatgagcctgtacgcacattagctcttgcgagctccacaggtcatgggactaatataatcgctggcgtcagtttgggtctggaatcaacagctcttcctgttcttgtcattagcgtagctattgtttcagcttactggctgggccagacctctggactcgtggacgaaaatggtgttcctactggcgggctgtttggcacagctgtagcaacaatgggcatgctaagtactgctgcttatgttctcacgatggatatgtttggtccaatagctgataatgctggtggaattgtagagatgagtcagcagccagaaagtgttcgcgagatcaccgaccttcttgatgcagtaggaaacactacaaaagctaccaccaaagggtttgccattggatctgctgcacttgcatcttttcttctgtttagtgcttatatggatgaggtagctacatttgcccgtgaacctttcaagcaggttgatattgccattccagaagtttttgttggcggattgttgggctctatgcttattttcttatttagtgcctgggcgtgttcagcagttggccgaactgctcaagaggttgtcagggaagtaagaaggcaatttattgagaggcctggtataatggaatataaggagaagccagattatgcacgttgtgttgctattgtagcatctgcatctttgagggagatgataaaacctggtgccttggctattgtttcacctatagcagttggtattactttccggatatttggatactatactgggcagcctctacttggtgctaaagttgtggcttccatgctgatgtttgcaacagtgtcgggtattctcatggctcttttcctgaacacggcaggtggtgcctgggataacgcaaagaagtacatcgagacgggggttctcggaggcaaaggaagtgattgtcataaggctgcagttacaggagacacagtgggagacccattcaaagacacagctggaccttcacttcatgtccttattaaaatgcttgctacaataacgctgcagcacaggatcttcgaatgtgaaatgccgttgtcgattccagatacattatcgttgtcagtcccagatgagttggagcagtttgggctcggattttcaaatccgaacggcgatgctgctgcctcggtggcggtgggctgcttactctcccgtggaaatggaaccaaccatcatcatctgtatagctccgccacaaaattcaatcggattcgtcgcctgagtagcattgtcggcatggagaccccgtcagtttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

H_PPase

Protein Analysis

879

Amino Acids

93.47

Weight (kDa)

5.91

Isoelectric Point (pI)

29.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16780 AT1G16780 AT1G16780 AT1G78920 AT1G78920 AT1G78920
fragaria_vesca	FvH4_6g36660 FvH4_6g36660
malus_domestica	MD09G1167000.v1.1 MD17G1161300.v1.1
prunus_persica	Prupe.3G024800_v2.0.a1 Prupe.3G024800_v2.0.a1 Prupe.3G024800_v2.0.a1 Prupe.3G024800_v2.0.a1 Prupe.3G024800_v2.0.a1
pyrus_communis	pycom09g08460 pycom17g15400
rosa_chinensis	RchiOBHm_Chr2g0149161
rosa_laevigata	RLG00000020371
rosa_multiflora	Rmu_sc0002345.1_g000007
rosa_roxburghii	Rroxscaffold_2G00098440
rosa_rugosa	Rorug02G0409300 Rorug02G0409400
rosa_samantha	Rh2AG469100 Rh2BG481600 Rh2CG455100 Rh2DG490500
rosa_wichuraiana	Rw2G038190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2204
Acc36I	ACCTGC	2 cut(s)	1810, 2204
AccB1I	GGYRCC	2 cut(s)	2057, 2219
AccI	GTMKAC	1 cut(s)	1220
AccII	CGCG	1 cut(s)	1671
AccIII	TCCGGA	2 cut(s)	289, 2100
AciI	CCGC	6 cut(s)	389, 935, 1533, 1854, 2516, 2574
AclI	AACGTT	1 cut(s)	1015
AclWI	GGATC	6 cut(s)	872, 1025, 1145, 1158, 1747, 2402
AcoI	YGGCCR	1 cut(s)	1912
AcsI	RAATTY	2 cut(s)	108, 2582
AcuI	CTGAAG	3 cut(s)	325, 351, 891
AcyI	GRCGYC	1 cut(s)	1413
AdeI	CACNNNGTG	1 cut(s)	2009
AfaI	GTAC	5 cut(s)	1117, 1331, 1359, 1576, 2243
AfiI	CCNNNNNNNGG	7 cut(s)	296, 354, 454, 1532, 1725, 2135, 2209
AgsI	TTSAA	8 cut(s)	720, 959, 1028, 1107, 1816, 2326, 2484, 2587
AjnI	CCWGG	4 cut(s)	1892, 1966, 2053, 2222
AjuI	GAANNNNNNNTTGG	2 cut(s)	1833, 1865
Alw21I	GWGCWC	1 cut(s)	1382
Alw26I	GTCTC	6 cut(s)	568, 571, 2243, 2298, 2310, 2618
AlwI	GGATC	6 cut(s)	872, 1025, 1145, 1158, 1747, 2402
Aor13HI	TCCGGA	2 cut(s)	289, 2100
AoxI	GGCC	5 cut(s)	38, 445, 1489, 1912, 1964
ApoI	RAATTY	2 cut(s)	108, 2582
Asp700I	GAANNNNTTC	2 cut(s)	1102, 1665
AspA2I	CCTAGG	1 cut(s)	881
AspS9I	GGNCC	7 cut(s)	38, 284, 345, 357, 1489, 1610, 2339
AsuC2I	CCSGG	1 cut(s)	714
AsuHPI	GGTGA	3 cut(s)	1093, 1669, 2067
AsuII	TTCGAA	2 cut(s)	106, 2400
AvaII	GGWCC	5 cut(s)	284, 345, 357, 1610, 2339
AvrII	CCTAGG	1 cut(s)	881
BamHI	GGATCC	1 cut(s)	1150
BanI	GGYRCC	2 cut(s)	2057, 2219
BanII	GRGCYC	3 cut(s)	1382, 1868, 2475
BauI	CACGAG	2 cut(s)	1119, 1505
BbsI	GAAGAC	1 cut(s)	205
Bbv12I	GWGCWC	1 cut(s)	1382
BbvCI	CCTCAGC	2 cut(s)	56, 429
BccI	CCATC	9 cut(s)	20, 289, 317, 364, 368, 677, 1221, 1591, 2562
BceAI	ACGGC	4 cut(s)	775, 2226, 2398, 2509
BcgI	CGANNNNNNTGC	4 cut(s)	2160, 2194, 2486, 2520
BciT130I	CCWGG	4 cut(s)	1894, 1968, 2055, 2224
BciVI	GTATCC	4 cut(s)	700, 749, 1169, 2105
BcnI	CCSGG	1 cut(s)	714
BcoDI	GTCTC	6 cut(s)	568, 571, 2243, 2298, 2310, 2618
BfaI	CTAG	3 cut(s)	567, 882, 939
BfmI	CTRYAG	6 cut(s)	477, 1143, 1551, 2079, 2292, 2384
BfuAI	ACCTGC	2 cut(s)	1810, 2204
BfuI	GTATCC	4 cut(s)	700, 749, 1169, 2105
BglI	GCCNNNNNGGC	1 cut(s)	2513
BglII	AGATCT	2 cut(s)	838, 904
BlnI	CCTAGG	1 cut(s)	881
BlpI	GCTNAGC	1 cut(s)	792
BmcAI	AGTACT	2 cut(s)	1331, 1576
Bme1390I	CCNGG	5 cut(s)	714, 1894, 1968, 2055, 2224
Bme18I	GGWCC	5 cut(s)	284, 345, 357, 1610, 2339
BmgT120I	GGNCC	7 cut(s)	38, 284, 345, 357, 1489, 1610, 2339
BmiI	GGNNCC	8 cut(s)	39, 285, 347, 358, 1152, 2059, 2221, 2548
BmrFI	CCNGG	5 cut(s)	714, 1894, 1968, 2055, 2224
BmrI	ACTGGG	2 cut(s)	343, 2130
BmsI	GCATC	7 cut(s)	301, 1302, 1681, 1763, 2033, 2039, 2488
BmuI	ACTGGG	2 cut(s)	343, 2130
BpiI	GAAGAC	1 cut(s)	205
Bpu10I	CCTNAGC	2 cut(s)	56, 429
Bpu1102I	GCTNAGC	1 cut(s)	792
Bpu14I	TTCGAA	2 cut(s)	106, 2400
BpuEI	CTTGAG	2 cut(s)	1187, 1908
BpuMI	CCSGG	1 cut(s)	714
BsaAI	YACGTR	1 cut(s)	320
BsaHI	GRCGYC	1 cut(s)	1413
BsaI	GGTCTC	2 cut(s)	2310, 2618
BsaJI	CCNNGG	7 cut(s)	448, 881, 1893, 2061, 2223, 2508, 2536
BsaWI	WCCGGW	2 cut(s)	289, 2100
BsaXI	ACNNNNNCTCC	7 cut(s)	409, 439, 906, 936, 2295, 2325, 2615
Bsc4I	CCNNNNNNNGG	7 cut(s)	296, 354, 454, 1532, 1725, 2135, 2209
Bse1I	ACTGG	5 cut(s)	349, 387, 1487, 1534, 2125
Bse3DI	GCAATG	2 cut(s)	252, 596
BseAI	TCCGGA	2 cut(s)	289, 2100
BseBI	CCWGG	4 cut(s)	1894, 1968, 2055, 2224
BseDI	CCNNGG	7 cut(s)	448, 881, 1893, 2061, 2223, 2508, 2536
BseGI	GGATG	4 cut(s)	31, 537, 669, 1789
BseLI	CCNNNNNNNGG	7 cut(s)	296, 354, 454, 1532, 1725, 2135, 2209
BseMI	GCAATG	2 cut(s)	252, 596
BseMII	CTCAG	6 cut(s)	47, 231, 443, 806, 1194, 2594
BseNI	ACTGG	5 cut(s)	349, 387, 1487, 1534, 2125
BseRI	GAGGAG	1 cut(s)	417
BseYI	CCCAGC	3 cut(s)	697, 796, 1486
BsgI	GTGCAG	1 cut(s)	1731
Bsh1236I	CGCG	1 cut(s)	1671
BshFI	GGCC	5 cut(s)	40, 447, 1491, 1914, 1966
BshNI	GGYRCC	2 cut(s)	2057, 2219
BsiHKAI	GWGCWC	1 cut(s)	1382
BsiSI	CCGG	3 cut(s)	290, 713, 2101
BslFI	GGGAC	4 cut(s)	297, 370, 1408, 2432
BslI	CCNNNNNNNGG	7 cut(s)	296, 354, 454, 1532, 1725, 2135, 2209
BsmAI	GTCTC	6 cut(s)	568, 571, 2243, 2298, 2310, 2618
BsmBI	CGTCTC	2 cut(s)	571, 2243
BsmFI	GGGAC	4 cut(s)	297, 370, 1408, 2432
BsnI	GGCC	5 cut(s)	40, 447, 1491, 1914, 1966
Bso31I	GGTCTC	2 cut(s)	2310, 2618
Bsp119I	TTCGAA	2 cut(s)	106, 2400
Bsp1286I	GDGCHC	3 cut(s)	1382, 1868, 2475
Bsp13I	TCCGGA	2 cut(s)	289, 2100
Bsp1720I	GCTNAGC	1 cut(s)	792
Bsp68I	TCGCGA	1 cut(s)	1671
BspACI	CCGC	6 cut(s)	389, 935, 1533, 1854, 2516, 2574
BspANI	GGCC	5 cut(s)	40, 447, 1491, 1914, 1966
BspCNI	CTCAG	6 cut(s)	48, 230, 442, 805, 1193, 2595
BspEI	TCCGGA	2 cut(s)	289, 2100
BspFNI	CGCG	1 cut(s)	1671
BspLI	GGNNCC	8 cut(s)	39, 285, 347, 358, 1152, 2059, 2221, 2548
BspMAI	CTGCAG	2 cut(s)	2296, 2388
BspMI	ACCTGC	2 cut(s)	1810, 2204
BspPI	GGATC	6 cut(s)	872, 1025, 1145, 1158, 1747, 2402
BspQI	GCTCTTC	1 cut(s)	1446
BspT104I	TTCGAA	2 cut(s)	106, 2400
BspT107I	GGYRCC	2 cut(s)	2057, 2219
BspTNI	GGTCTC	2 cut(s)	2310, 2618
BsrDI	GCAATG	2 cut(s)	252, 596
BsrI	ACTGG	5 cut(s)	349, 387, 1487, 1534, 2125
BssECI	CCNNGG	7 cut(s)	448, 881, 1893, 2061, 2223, 2508, 2536
BssNI	GRCGYC	1 cut(s)	1413
BssSI	CACGAG	2 cut(s)	1119, 1505
BssT1I	CCWWGG	3 cut(s)	448, 881, 2061
Bst2BI	CACGAG	2 cut(s)	1119, 1505
Bst2UI	CCWGG	4 cut(s)	1894, 1968, 2055, 2224
Bst4CI	ACNGT	7 cut(s)	478, 582, 640, 1189, 1254, 2176, 2311
Bst6I	CTCTTC	2 cut(s)	747, 1446
BstACI	GRCGYC	1 cut(s)	1413
BstAPI	GCANNNNNTGC	2 cut(s)	1256, 2219
BstBAI	YACGTR	1 cut(s)	320
BstBI	TTCGAA	2 cut(s)	106, 2400
BstC8I	GCNNGC	6 cut(s)	187, 1378, 1411, 1535, 1568, 2370
BstDEI	CTNAG	8 cut(s)	56, 217, 366, 429, 792, 1180, 1571, 2603
BstDSI	CCRYGG	1 cut(s)	2536
BstF5I	GGATG	4 cut(s)	31, 537, 669, 1789
BstFNI	CGCG	1 cut(s)	1671
BstMAI	GTCTC	6 cut(s)	568, 571, 2243, 2298, 2310, 2618
BstNI	CCWGG	4 cut(s)	1894, 1968, 2055, 2224
BstNSI	RCATGY	3 cut(s)	76, 471, 1570
BstSCI	CCNGG	5 cut(s)	712, 1892, 1966, 2053, 2222
BstSFI	CTRYAG	6 cut(s)	477, 1143, 1551, 2079, 2292, 2384
BstUI	CGCG	1 cut(s)	1671
BstV2I	GAAGAC	1 cut(s)	205
BstX2I	RGATCY	6 cut(s)	838, 904, 1030, 1150, 1739, 2394
BstXI	CCANNNNNNTGG	1 cut(s)	1499
BstYI	RGATCY	6 cut(s)	838, 904, 1030, 1150, 1739, 2394
BsuI	GTATCC	4 cut(s)	700, 749, 1169, 2105
BsuRI	GGCC	5 cut(s)	40, 447, 1491, 1914, 1966
BtgI	CCRYGG	1 cut(s)	2536
BtgZI	GCGATG	1 cut(s)	2511
BtsCI	GGATG	4 cut(s)	31, 537, 669, 1789
BtsI	GCAGTG	2 cut(s)	462, 1299
BtsIMutI	CAGTG	6 cut(s)	462, 988, 1239, 1299, 2181, 2316
BtuMI	TCGCGA	1 cut(s)	1671
BveI	ACCTGC	2 cut(s)	1810, 2204
Cac8I	GCNNGC	6 cut(s)	187, 1378, 1411, 1535, 1568, 2370
Cfr13I	GGNCC	7 cut(s)	38, 284, 345, 357, 1489, 1610, 2339
CseI	GACGC	2 cut(s)	1206, 1402
CsiI	ACCWGGT	1 cut(s)	2053
Csp6I	GTAC	5 cut(s)	1116, 1330, 1358, 1575, 2242
CviAII	CATG	9 cut(s)	7, 73, 468, 1391, 1567, 2158, 2191, 2351, 2620
CviQI	GTAC	5 cut(s)	1116, 1330, 1358, 1575, 2242
DdeI	CTNAG	8 cut(s)	56, 217, 366, 429, 792, 1180, 1571, 2603
DraIII	CACNNNGTG	1 cut(s)	2009
EaeI	YGGCCR	1 cut(s)	1912
Eam1104I	CTCTTC	2 cut(s)	747, 1446
EarI	CTCTTC	2 cut(s)	747, 1446
EciI	GGCGGA	2 cut(s)	1869, 2563
Ecl136II	GAGCTC	1 cut(s)	1380
Eco130I	CCWWGG	3 cut(s)	448, 881, 2061
Eco147I	AGGCCT	1 cut(s)	1966
Eco24I	GRGCYC	3 cut(s)	1382, 1868, 2475
Eco31I	GGTCTC	2 cut(s)	2310, 2618
Eco32I	GATATC	1 cut(s)	306
Eco47I	GGWCC	5 cut(s)	284, 345, 357, 1610, 2339
Eco53kI	GAGCTC	1 cut(s)	1380
Eco57I	CTGAAG	3 cut(s)	325, 351, 891
EcoICRI	GAGCTC	1 cut(s)	1380
EcoO109I	RGGNCCY	3 cut(s)	38, 284, 345
EcoRII	CCWGG	4 cut(s)	1892, 1966, 2053, 2222
EcoRV	GATATC	1 cut(s)	306
EcoT14I	CCWWGG	3 cut(s)	448, 881, 2061
EcoT38I	GRGCYC	3 cut(s)	1382, 1868, 2475
ErhI	CCWWGG	3 cut(s)	448, 881, 2061
Esp3I	CGTCTC	2 cut(s)	571, 2243
FaeI	CATG	9 cut(s)	10, 76, 471, 1394, 1570, 2161, 2194, 2354, 2623
FaqI	GGGAC	4 cut(s)	297, 370, 1408, 2432
FatI	CATG	9 cut(s)	6, 72, 467, 1390, 1566, 2157, 2190, 2350, 2619
FauI	CCCGC	1 cut(s)	1526
FblI	GTMKAC	1 cut(s)	1220
FokI	GGATG	4 cut(s)	38, 544, 656, 1796
FriOI	GRGCYC	3 cut(s)	1382, 1868, 2475
FspBI	CTAG	3 cut(s)	567, 882, 939
GsaI	CCCAGC	3 cut(s)	701, 800, 1490
HaeIII	GGCC	5 cut(s)	40, 447, 1491, 1914, 1966
HapII	CCGG	3 cut(s)	290, 713, 2101
HgaI	GACGC	2 cut(s)	1206, 1402
Hin1I	GRCGYC	1 cut(s)	1413
Hin1II	CATG	9 cut(s)	10, 76, 471, 1394, 1570, 2161, 2194, 2354, 2623
HpaII	CCGG	3 cut(s)	290, 713, 2101
HphI	GGTGA	3 cut(s)	1093, 1669, 2067
Hpy166II	GTNNAC	5 cut(s)	1066, 1118, 1221, 1510, 1808
Hpy188I	TCNGA	7 cut(s)	303, 310, 1206, 2264, 2477, 2490, 2592
Hpy8I	GTNNAC	5 cut(s)	1066, 1118, 1221, 1510, 1808
Hpy99I	CGWCG	1 cut(s)	2601
HpyAV	CCTTC	9 cut(s)	248, 326, 447, 718, 1044, 1129, 1694, 1941, 2352
HpyCH4III	ACNGT	7 cut(s)	478, 582, 640, 1189, 1254, 2176, 2311
HpyCH4IV	ACGT	3 cut(s)	319, 1015, 2005
HpyF3I	CTNAG	8 cut(s)	56, 217, 366, 429, 792, 1180, 1571, 2603
HpySE526I	ACGT	3 cut(s)	319, 1015, 2005
Hsp92I	GRCGYC	1 cut(s)	1413
Hsp92II	CATG	9 cut(s)	10, 76, 471, 1394, 1570, 2161, 2194, 2354, 2623
Kpn2I	TCCGGA	2 cut(s)	289, 2100
LguI	GCTCTTC	1 cut(s)	1446
LmnI	GCTCC	8 cut(s)	182, 326, 497, 767, 833, 1385, 2461, 2576
LweI	GCATC	7 cut(s)	301, 1302, 1681, 1763, 2033, 2039, 2488
MabI	ACCWGGT	1 cut(s)	2053
MaeI	CTAG	3 cut(s)	567, 882, 939
MaeII	ACGT	3 cut(s)	319, 1015, 2005
MaeIII	GTNAC	3 cut(s)	727, 1183, 2296
MboII	GAAGA	9 cut(s)	205, 331, 734, 737, 884, 1040, 1433, 1754, 2389
MflI	RGATCY	6 cut(s)	838, 904, 1030, 1150, 1739, 2394
MhlI	GDGCHC	3 cut(s)	1382, 1868, 2475
MluCI	AATT	7 cut(s)	31, 108, 1023, 1161, 1635, 1952, 2582
MlyI	GAGTC	5 cut(s)	418, 446, 570, 1497, 1657
MmeI	TCCRAC	6 cut(s)	733, 811, 826, 892, 1075, 2439
MroI	TCCGGA	2 cut(s)	289, 2100
MroXI	GAANNNNTTC	2 cut(s)	1102, 1665
MseI	TTAA	1 cut(s)	2361
MslI	CAYNNNNRTG	1 cut(s)	2162
MspA1I	CMGCKG	4 cut(s)	796, 824, 1550, 2336
MspI	CCGG	3 cut(s)	290, 713, 2101
MspR9I	CCNGG	5 cut(s)	714, 1894, 1968, 2055, 2224
MvaI	CCWGG	4 cut(s)	1894, 1968, 2055, 2224
MvnI	CGCG	1 cut(s)	1671
NciI	CCSGG	1 cut(s)	714
NlaIII	CATG	9 cut(s)	10, 76, 471, 1394, 1570, 2161, 2194, 2354, 2623
NlaIV	GGNNCC	8 cut(s)	39, 285, 347, 358, 1152, 2059, 2221, 2548
NmuCI	GTSAC	1 cut(s)	1183
NruI	TCGCGA	1 cut(s)	1671
NspI	RCATGY	3 cut(s)	76, 471, 1570
NspV	TTCGAA	2 cut(s)	106, 2400
PaeI	GCATGC	1 cut(s)	1570
PaqCI	CACCTGC	1 cut(s)	2204
PceI	AGGCCT	1 cut(s)	1966
PciSI	GCTCTTC	1 cut(s)	1446
PdmI	GAANNNNTTC	2 cut(s)	1102, 1665
PfeI	GAWTC	6 cut(s)	865, 886, 1124, 1430, 2422, 2593
PflFI	GACNNNGTC	1 cut(s)	2629
PleI	GAGTC	5 cut(s)	418, 445, 569, 1497, 1656
PpsI	GAGTC	5 cut(s)	418, 445, 569, 1497, 1656
Ppu21I	YACGTR	1 cut(s)	320
PpuMI	RGGWCCY	2 cut(s)	284, 345
Psp124BI	GAGCTC	1 cut(s)	1382
Psp1406I	AACGTT	1 cut(s)	1015
Psp5II	RGGWCCY	2 cut(s)	284, 345
Psp6I	CCWGG	4 cut(s)	1892, 1966, 2053, 2222
PspFI	CCCAGC	3 cut(s)	697, 796, 1486
PspGI	CCWGG	4 cut(s)	1892, 1966, 2053, 2222
PspN4I	GGNNCC	8 cut(s)	39, 285, 347, 358, 1152, 2059, 2221, 2548
PspPI	GGNCC	7 cut(s)	38, 284, 345, 357, 1489, 1610, 2339
PspPPI	RGGWCCY	2 cut(s)	284, 345
PstI	CTGCAG	2 cut(s)	2296, 2388
PsuI	RGATCY	6 cut(s)	838, 904, 1030, 1150, 1739, 2394
PsyI	GACNNNGTC	1 cut(s)	2629
PvuII	CAGCTG	4 cut(s)	796, 824, 1550, 2336
RruI	TCGCGA	1 cut(s)	1671
RsaI	GTAC	5 cut(s)	1117, 1331, 1359, 1576, 2243
RsaNI	GTAC	5 cut(s)	1116, 1330, 1358, 1575, 2242
RseI	CAYNNNNRTG	1 cut(s)	2162
SacI	GAGCTC	1 cut(s)	1382
SapI	GCTCTTC	1 cut(s)	1446
SaqAI	TTAA	1 cut(s)	2361
Sau96I	GGNCC	7 cut(s)	38, 284, 345, 357, 1489, 1610, 2339
ScaI	AGTACT	2 cut(s)	1331, 1576
SchI	GAGTC	5 cut(s)	418, 446, 570, 1497, 1657
ScrFI	CCNGG	5 cut(s)	714, 1894, 1968, 2055, 2224
SduI	GDGCHC	3 cut(s)	1382, 1868, 2475
SexAI	ACCWGGT	1 cut(s)	2053
SfaNI	GCATC	7 cut(s)	301, 1302, 1681, 1763, 2033, 2039, 2488
SfcI	CTRYAG	6 cut(s)	477, 1143, 1551, 2079, 2292, 2384
SfuI	TTCGAA	2 cut(s)	106, 2400
SinI	GGWCC	5 cut(s)	284, 345, 357, 1610, 2339
SmiMI	CAYNNNNRTG	1 cut(s)	2162
SmlI	CTYRAG	2 cut(s)	1166, 1923
SmoI	CTYRAG	2 cut(s)	1166, 1923
SphI	GCATGC	1 cut(s)	1570
Sse9I	AATT	7 cut(s)	31, 108, 1023, 1161, 1635, 1952, 2582
SseBI	AGGCCT	1 cut(s)	1966
SsiI	CCGC	6 cut(s)	389, 935, 1533, 1854, 2516, 2574
SspMI	CTAG	3 cut(s)	567, 882, 939
SstI	GAGCTC	1 cut(s)	1382
StuI	AGGCCT	1 cut(s)	1966
StyD4I	CCNGG	5 cut(s)	712, 1892, 1966, 2053, 2222
StyI	CCWWGG	3 cut(s)	448, 881, 2061
TaaI	ACNGT	7 cut(s)	478, 582, 640, 1189, 1254, 2176, 2311
TaiI	ACGT	3 cut(s)	322, 1018, 2008
TaqI	TCGA	5 cut(s)	106, 559, 2247, 2400, 2420
TasI	AATT	7 cut(s)	31, 108, 1023, 1161, 1635, 1952, 2582
TatI	WGTACW	3 cut(s)	1329, 1574, 2241
TauI	GCSGC	1 cut(s)	938
TfiI	GAWTC	6 cut(s)	865, 886, 1124, 1430, 2422, 2593
Tru1I	TTAA	1 cut(s)	2361
Tru9I	TTAA	1 cut(s)	2361
TscAI	CASTG	6 cut(s)	469, 988, 1246, 1306, 2181, 2316
TseFI	GTSAC	1 cut(s)	1183
Tsp45I	GTSAC	1 cut(s)	1183
TspDTI	ATGAA	4 cut(s)	737, 1033, 1077, 2339
TspRI	CASTG	6 cut(s)	469, 988, 1246, 1306, 2181, 2316
Tth111I	GACNNNGTC	1 cut(s)	2629
VpaK11BI	GGWCC	5 cut(s)	284, 345, 357, 1610, 2339
XapI	RAATTY	2 cut(s)	108, 2582
XceI	RCATGY	3 cut(s)	76, 471, 1570
XcmI	CCANNNNNNNNNTGG	1 cut(s)	367
XmaJI	CCTAGG	1 cut(s)	881
XmiI	GTMKAC	1 cut(s)	1220
XmnI	GAANNNNTTC	2 cut(s)	1102, 1665
XspI	CTAG	3 cut(s)	567, 882, 939
ZrmI	AGTACT	2 cut(s)	1331, 1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.