Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0007573

Physical Location & Seq

Genomic Coordinates Reverse (-)

13719290 .. 13723167

Gene Structure 3878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1167400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGTGGAATGCGAAAAAAGCAAATGGAGCAAAGAAGGAAGCAGGAGGAAATGGATTGGTGGCAGTTGCCATAGACAATCAGAAAGGGAGCCAAAATGCACTCAGATGGGCTGCTGAACATGTTCTCACCAGGGGCCAAACTGTCATTCTACTACATGTTCAGAAGACATCATCAGTTTGCCCCTTGGCTGGAAACAATGCTGTTGTATGCAATATAAACAATCCGTCTCAATCCCCGCGCAAACAGCAACTCGAAAAGATGGCCAAGGATCTGTTCGTTACCTTCCATTGCTATTGTACTCGTAAGGATATAAACTGCCTTGATATCATACTTGAAGACTCAGATATACCAAAAGCACTAACAGAGTATGCTTCCTATGCTGCAATTGAGACTTTGGTTCTGGGAGCTCCATCAAAGCATGGATTTATAAGATTCAAGTCATCAAGTATTCCAAGCAGTGTATCAAAAGGGGCACCTGATTTCTGCACCATATATGTCATCTCCAAAGGGAAAATCAATTCAGAGCGACATGCTTCTCGTCCAGCACCTCACAGTTCTCCGCTACTTGCCCAAATAGAGGCATTAAATCAGCAAAGTGCTAAAGCAGCTGAAACACCTAAACAAAATATGTACTTGAAAGCCAGACCATCGTTCAAGCCTCGCAACCTGCAAGATGAAGCAGCCAGATACGCATATGCAAGAGGAGGAGGTTTTAGTAATGGAATGATTGGTGGAGGGTTCTCAGAATCGGAAAGTGACATATCATTTATAAGCTCTGACAGGGCGAGCACTGACCGAGCGTCATCTGTGATGTATGACTATATGGACCGAGGGCGGCTATCTACCAGCTCAGACCAAAGCTTTGGATCAATGCGCCTAGGACCTAAGTTTGCGGAACTCAATTTTCAGCAAGATCTCTCATCAGTTTCACATGAAAGCAGCCGAACATCATCATCATGGTCATCACAGAACCTGGATGAAGTAGAATCGGAGATGAGGAGGCTAAAGCTAGAGCTGAAGCAAACAATGGACATGTACAGTACGGCATGCAGAGAAGCAATTACAGCTAAACAGAAAGAAATGAAGTTGCACAGCTGGAGGGTTGAAGAGGAACAAAAACTAGAGGAGGCACGACTGGGTCAAGAAGCAGCACTGGCAGTTGCAGAGAAAGAAAAAGCTAGGTGCAAGGCAGCCATGGAAGCAGCTGATGCAGCTAAAAGAATTGCAGAATTTGAGTCAAATAAACGGGTAAACACAGAAAGTAAGGCTCTTAGAGAAGCAGAGGACATGAGGAAGCTATTGTCAAATCTAGCCCACACTGATGACAAGTATAGGAGGTATTCCATTGAGGAGATTGAAGAAGCAACAGAACACTTTTTGCCATCTCGAAAAGTTGGGGAAGGAGGTTATGGTCCTGTCTATAAGTGCTATCTTAATCACACGCTGGTTGCAGTCAAGGTCTTGCGCCCGGATGCTGCTCAAGGAAGGTCACAGTTTCAGAAAGAGATCGACATACTTAGCTGCATTCGACATCCCAACATGGTGCTGCTTCTAGGAGCCTGCCCGGAATACGGCATTCTAGCCTATGAATACATGGCGAATGGAAGCTTAGACGACTGTCTCTCAAGAAAAGGGAACACTCCAGCTTTGTCTTGGCAACTTAGGTTCCGCATTGCAGCTGAGATTGCCACAGGCCTACTCTTTCTTCACCAGACGAAGCCGGAGCCCTTGGTGCACCGTGACCTCAAGCCAGGCAACATTTTGCTAGATCACAACTATGTGAGCAAGATTAGTGATGTCGGATTGGCCAGACTTGTCCCAGCTGTTGCTGAAAACATGACGCAGTGCCTCATGACAGCAACAGCCGGAACATTCTGCTATATTGATCCTGAGTATCAGCAGACAGGTATGCTTGGTGTAAAATCTGATGTATACTCCTTAGGCATTATGCTTCTTCAATTGGTAACAAACAGACCACCTATGGGGTTGGCTCACCATGTCGAATGTGCAATTGAAAGTGGCACATTTGCGGAGATGCTGGACCCATCTGTGCCTGATTGGCCATATGAAGAAGCCTTGAGCTTTGCAAAGCTAGCAGTCCAATGTGCAGAACTTAGACGGAAGGACAGGCCGGATCTTGGCACTGTGATACTGCCAGAACTGAATAAACTGAGAGAACTTGCTGACGAAAAGATGAACCACAAGATATTAGGAGGCAATGATGGCCCTTCTCCTTATCATAGTCATGTTGCCGATCAACAAGTAAGTCAAGAAAATCGAAAAGTTCGGAAGCATTTAGTTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

769

Amino Acids

85.17

Weight (kDa)

7.81

Isoelectric Point (pI)

50.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	20 - 159	2.7e-08	Universal stress protein family
Pkinase	PF00069	462 - 711	2.9e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	463 - 714	2.8e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16760 AT1G16760 AT1G78940 AT1G78940 AT1G78940 AT3G20200 AT3G20200 AT3G20200 AT3G20200
fragaria_vesca	FvH4_6g36560
malus_domestica	MD09G1167400.v1.1 MD17G1161000.v1.1
prunus_persica	Prupe.3G025400_v2.0.a1 Prupe.3G025400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0149031
rosa_laevigata	RLG00000020364
rosa_multiflora	Rmu_sc0007360.1_g000003
rosa_roxburghii	Rroxscaffold_2G00098520
rosa_rugosa	Rorug02G0408600 Rorug02G0408700
rosa_samantha	Rh2BG480900 Rh2CG454400 Rh2DG489700
rosa_wichuraiana	Rw2G038130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	428, 770
Acc36I	ACCTGC	1 cut(s)	675
AccB1I	GGYRCC	1 cut(s)	472
AccI	GTMKAC	1 cut(s)	1932
AccII	CGCG	1 cut(s)	238
AciI	CCGC	6 cut(s)	236, 560, 835, 893, 1669, 2030
AclWI	GGATC	4 cut(s)	276, 874, 1880, 2142
AcoI	YGGCCR	3 cut(s)	261, 1806, 2060
AcsI	RAATTY	1 cut(s)	1229
AcuI	CTGAAG	1 cut(s)	1037
AfaI	GTAC	4 cut(s)	298, 632, 1037, 1042
AfiI	CCNNNNNNNGG	5 cut(s)	188, 577, 1571, 1982, 2138
AflIII	ACRYGT	3 cut(s)	118, 154, 1032
AgsI	TTSAA	8 cut(s)	335, 436, 637, 655, 1106, 1358, 1958, 2015
AhdI	GACNNNNNGTC	1 cut(s)	799
AjnI	CCWGG	3 cut(s)	128, 972, 1750
AjuI	GAANNNNNNNTTGG	4 cut(s)	129, 161, 257, 289
Alw21I	GWGCWC	3 cut(s)	409, 791, 1737
Alw26I	GTCTC	3 cut(s)	231, 383, 1625
Alw44I	GTGCAC	1 cut(s)	1733
AlwI	GGATC	4 cut(s)	276, 874, 1880, 2142
AlwNI	CAGNNNCTG	1 cut(s)	973
AoxI	GGCC	7 cut(s)	133, 261, 1693, 1806, 2060, 2129, 2224
ApaLI	GTGCAC	1 cut(s)	1733
ApoI	RAATTY	1 cut(s)	1229
ArsI	GACNNNNNNTTYG	2 cut(s)	845, 877
Asp700I	GAANNNNTTC	1 cut(s)	120
AspA2I	CCTAGG	1 cut(s)	877
AspLEI	GCGC	3 cut(s)	240, 876, 1467
AspS9I	GGNCC	6 cut(s)	133, 826, 881, 1412, 2041, 2225
AsuC2I	CCSGG	2 cut(s)	1469, 1565
AsuHPI	GGTGA	3 cut(s)	118, 1700, 1985
AsuNHI	GCTAGC	1 cut(s)	2092
AvaII	GGWCC	4 cut(s)	826, 881, 1412, 2041
AvrII	CCTAGG	1 cut(s)	877
AxyI	CCTNAGG	1 cut(s)	1939
BaeGI	GKGCMC	2 cut(s)	475, 1737
BalI	TGGCCA	3 cut(s)	263, 1808, 2062
BanI	GGYRCC	1 cut(s)	472
BanII	GRGCYC	2 cut(s)	409, 1728
BbsI	GAAGAC	2 cut(s)	170, 342
Bbv12I	GWGCWC	3 cut(s)	409, 791, 1737
BccI	CCATC	7 cut(s)	99, 253, 418, 655, 1390, 2053, 2216
BceAI	ACGGC	2 cut(s)	1059, 1588
BciT130I	CCWGG	3 cut(s)	130, 974, 1752
BcnI	CCSGG	2 cut(s)	1469, 1565
BcoDI	GTCTC	3 cut(s)	231, 383, 1625
BfaI	CTAG	9 cut(s)	878, 1010, 1121, 1179, 1310, 1553, 1580, 1766, 2093
BfuAI	ACCTGC	1 cut(s)	675
BglI	GCCNNNNNGGC	1 cut(s)	2059
BglII	AGATCT	1 cut(s)	913
BlnI	CCTAGG	1 cut(s)	877
Bme1390I	CCNGG	5 cut(s)	130, 974, 1469, 1565, 1752
Bme18I	GGWCC	4 cut(s)	826, 881, 1412, 2041
BmeRI	GACNNNNNGTC	1 cut(s)	799
BmgT120I	GGNCC	6 cut(s)	133, 826, 881, 1412, 2041, 2225
BmiI	GGNNCC	7 cut(s)	89, 134, 474, 1558, 1667, 1725, 2043
BmrFI	CCNGG	5 cut(s)	130, 974, 1469, 1565, 1752
BmrI	ACTGGG	1 cut(s)	1145
BmsI	GCATC	3 cut(s)	1198, 1462, 2025
BmtI	GCTAGC	1 cut(s)	2096
BmuI	ACTGGG	1 cut(s)	1145
BoxI	GACNNNNGTC	1 cut(s)	1617
BpiI	GAAGAC	2 cut(s)	170, 342
BpmI	CTGGAG	2 cut(s)	1117, 1626
BpuEI	CTTGAG	4 cut(s)	1464, 1609, 1730, 2098
BpuMI	CCSGG	2 cut(s)	1469, 1565
BsaJI	CCNNGG	7 cut(s)	129, 183, 264, 829, 877, 1194, 1728
Bsc4I	CCNNNNNNNGG	5 cut(s)	188, 577, 1571, 1982, 2138
Bse1I	ACTGG	2 cut(s)	1140, 1158
Bse21I	CCTNAGG	1 cut(s)	1939
Bse3DI	GCAATG	3 cut(s)	286, 1671, 2224
BseBI	CCWGG	3 cut(s)	130, 974, 1752
BseDI	CCNNGG	7 cut(s)	129, 183, 264, 829, 877, 1194, 1728
BseGI	GGATG	3 cut(s)	982, 1477, 1531
BseLI	CCNNNNNNNGG	5 cut(s)	188, 577, 1571, 1982, 2138
BseMI	GCAATG	3 cut(s)	286, 1671, 2224
BseMII	CTCAG	7 cut(s)	115, 354, 756, 864, 1671, 1881, 2162
BseNI	ACTGG	2 cut(s)	1140, 1158
BseRI	GAGGAG	5 cut(s)	717, 720, 1012, 1139, 1364
BseSI	GKGCMC	2 cut(s)	475, 1737
BseYI	CCCAGC	1 cut(s)	1819
BsgI	GTGCAG	2 cut(s)	469, 2127
Bsh1236I	CGCG	1 cut(s)	238
BshFI	GGCC	7 cut(s)	135, 263, 1695, 1808, 2062, 2131, 2226
BshNI	GGYRCC	1 cut(s)	472
BsiHKAI	GWGCWC	3 cut(s)	409, 791, 1737
BsiSI	CCGG	5 cut(s)	1469, 1565, 1721, 1866, 2132
BslFI	GGGAC	1 cut(s)	1802
BslI	CCNNNNNNNGG	5 cut(s)	188, 577, 1571, 1982, 2138
BsmAI	GTCTC	3 cut(s)	231, 383, 1625
BsmBI	CGTCTC	1 cut(s)	231
BsmFI	GGGAC	1 cut(s)	1802
BsmI	GAATGC	3 cut(s)	13, 1524, 1575
BsnI	GGCC	7 cut(s)	135, 263, 1695, 1808, 2062, 2131, 2226
Bsp1286I	GDGCHC	5 cut(s)	409, 475, 791, 1728, 1737
Bsp1407I	TGTACA	1 cut(s)	1035
Bsp143I	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
Bsp19I	CCATGG	1 cut(s)	1194
BspACI	CCGC	6 cut(s)	236, 560, 835, 893, 1669, 2030
BspANI	GGCC	7 cut(s)	135, 263, 1695, 1808, 2062, 2131, 2226
BspCNI	CTCAG	7 cut(s)	114, 353, 755, 863, 1672, 1882, 2163
BspFNI	CGCG	1 cut(s)	238
BspHI	TCATGA	1 cut(s)	1851
BspLI	GGNNCC	7 cut(s)	89, 134, 474, 1558, 1667, 1725, 2043
BspMI	ACCTGC	1 cut(s)	675
BspOI	GCTAGC	1 cut(s)	2096
BspPI	GGATC	4 cut(s)	276, 874, 1880, 2142
BspT107I	GGYRCC	1 cut(s)	472
BsrDI	GCAATG	3 cut(s)	286, 1671, 2224
BsrGI	TGTACA	1 cut(s)	1035
BsrI	ACTGG	2 cut(s)	1140, 1158
BssECI	CCNNGG	7 cut(s)	129, 183, 264, 829, 877, 1194, 1728
BssMI	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
BssNAI	GTATAC	1 cut(s)	1933
BssT1I	CCWWGG	5 cut(s)	183, 264, 877, 1194, 1728
Bst1107I	GTATAC	1 cut(s)	1933
Bst2UI	CCWGG	3 cut(s)	130, 974, 1752
Bst4CI	ACNGT	7 cut(s)	142, 554, 1040, 1494, 1619, 1739, 2146
Bst6I	CTCTTC	1 cut(s)	1101
BstAPI	GCANNNNNTGC	1 cut(s)	1208
BstAUI	TGTACA	1 cut(s)	1035
BstC8I	GCNNGC	4 cut(s)	787, 1048, 1561, 2094
BstDSI	CCRYGG	1 cut(s)	1194
BstF5I	GGATG	3 cut(s)	982, 1477, 1531
BstFNI	CGCG	1 cut(s)	238
BstHHI	GCGC	3 cut(s)	240, 876, 1467
BstKTI	GATC	8 cut(s)	271, 869, 916, 1509, 1771, 1888, 2137, 2257
BstMAI	GTCTC	3 cut(s)	231, 383, 1625
BstMBI	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
BstNI	CCWGG	3 cut(s)	130, 974, 1752
BstNSI	RCATGY	5 cut(s)	122, 158, 533, 1036, 1050
BstPAI	GACNNNNGTC	1 cut(s)	1617
BstSCI	CCNGG	5 cut(s)	128, 972, 1467, 1563, 1750
BstSLI	GKGCMC	2 cut(s)	475, 1737
BstUI	CGCG	1 cut(s)	238
BstV2I	GAAGAC	2 cut(s)	170, 342
BstX2I	RGATCY	3 cut(s)	268, 913, 2134
BstXI	CCANNNNNNTGG	1 cut(s)	863
BstYI	RGATCY	3 cut(s)	268, 913, 2134
BstZ17I	GTATAC	1 cut(s)	1933
Bsu36I	CCTNAGG	1 cut(s)	1939
BsuRI	GGCC	7 cut(s)	135, 263, 1695, 1808, 2062, 2131, 2226
BtgI	CCRYGG	1 cut(s)	1194
BtsCI	GGATG	3 cut(s)	982, 1477, 1531
BtsI	GCAGTG	2 cut(s)	463, 1850
BtsIMutI	CAGTG	6 cut(s)	463, 789, 1151, 1317, 1850, 2142
BveI	ACCTGC	1 cut(s)	675
Cac8I	GCNNGC	4 cut(s)	787, 1048, 1561, 2094
CaiI	CAGNNNCTG	1 cut(s)	973
CciI	TCATGA	1 cut(s)	1851
CfoI	GCGC	3 cut(s)	240, 876, 1467
Cfr13I	GGNCC	6 cut(s)	133, 826, 881, 1412, 2041, 2225
CseI	GACGC	2 cut(s)	789, 1849
Csp6I	GTAC	4 cut(s)	297, 631, 1036, 1041
CviQI	GTAC	4 cut(s)	297, 631, 1036, 1041
DpnI	GATC	8 cut(s)	270, 868, 915, 1508, 1770, 1887, 2136, 2256
DpnII	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
DriI	GACNNNNNGTC	1 cut(s)	799
EaeI	YGGCCR	3 cut(s)	261, 1806, 2060
Eam1104I	CTCTTC	1 cut(s)	1101
Eam1105I	GACNNNNNGTC	1 cut(s)	799
EarI	CTCTTC	1 cut(s)	1101
Ecl136II	GAGCTC	1 cut(s)	407
Eco130I	CCWWGG	5 cut(s)	183, 264, 877, 1194, 1728
Eco147I	AGGCCT	1 cut(s)	1695
Eco24I	GRGCYC	2 cut(s)	409, 1728
Eco32I	GATATC	1 cut(s)	325
Eco47I	GGWCC	4 cut(s)	826, 881, 1412, 2041
Eco53kI	GAGCTC	1 cut(s)	407
Eco57I	CTGAAG	1 cut(s)	1037
Eco81I	CCTNAGG	1 cut(s)	1939
EcoICRI	GAGCTC	1 cut(s)	407
EcoO109I	RGGNCCY	1 cut(s)	881
EcoRII	CCWGG	3 cut(s)	128, 972, 1750
EcoRV	GATATC	1 cut(s)	325
EcoT14I	CCWWGG	5 cut(s)	183, 264, 877, 1194, 1728
EcoT38I	GRGCYC	2 cut(s)	409, 1728
ErhI	CCWWGG	5 cut(s)	183, 264, 877, 1194, 1728
Esp3I	CGTCTC	1 cut(s)	231
FaqI	GGGAC	1 cut(s)	1802
FauI	CCCGC	1 cut(s)	243
FauNDI	CATATG	2 cut(s)	694, 2065
FblI	GTMKAC	1 cut(s)	1932
FokI	GGATG	3 cut(s)	989, 1484, 1518
FriOI	GRGCYC	2 cut(s)	409, 1728
FspBI	CTAG	9 cut(s)	878, 1010, 1121, 1179, 1310, 1553, 1580, 1766, 2093
GlaI	GCGC	3 cut(s)	239, 875, 1466
GsaI	CCCAGC	1 cut(s)	1823
GsuI	CTGGAG	2 cut(s)	1117, 1626
HaeIII	GGCC	7 cut(s)	135, 263, 1695, 1808, 2062, 2131, 2226
HapII	CCGG	5 cut(s)	1469, 1565, 1721, 1866, 2132
HgaI	GACGC	2 cut(s)	789, 1849
HhaI	GCGC	3 cut(s)	240, 876, 1467
Hin6I	GCGC	3 cut(s)	238, 874, 1465
HinP1I	GCGC	3 cut(s)	238, 874, 1465
HindIII	AAGCTT	2 cut(s)	859, 1606
HinfI	GANTC	5 cut(s)	338, 432, 746, 986, 1235
HpaII	CCGG	5 cut(s)	1469, 1565, 1721, 1866, 2132
HphI	GGTGA	3 cut(s)	118, 1700, 1985
Hpy166II	GTNNAC	3 cut(s)	1252, 1735, 1933
Hpy188III	TCNNGA	6 cut(s)	1142, 1386, 1626, 1852, 1889, 2270
Hpy8I	GTNNAC	3 cut(s)	1252, 1735, 1933
HpyAV	CCTTC	6 cut(s)	28, 292, 1394, 1479, 2116, 2238
HpyCH4III	ACNGT	7 cut(s)	142, 554, 1040, 1494, 1619, 1739, 2146
HspAI	GCGC	3 cut(s)	238, 874, 1465
Kzo9I	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
LmnI	GCTCC	6 cut(s)	26, 87, 404, 412, 1556, 1723
LweI	GCATC	3 cut(s)	1198, 1462, 2025
MaeI	CTAG	9 cut(s)	878, 1010, 1121, 1179, 1310, 1553, 1580, 1766, 2093
MaeIII	GTNAC	5 cut(s)	277, 755, 1488, 1739, 1963
MalI	GATC	8 cut(s)	270, 868, 915, 1508, 1770, 1887, 2136, 2256
MboI	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
MboII	GAAGA	7 cut(s)	175, 347, 1118, 1370, 1697, 1946, 2081
MfeI	CAATTG	3 cut(s)	384, 1958, 2010
MflI	RGATCY	3 cut(s)	268, 913, 2134
MhlI	GDGCHC	5 cut(s)	409, 475, 791, 1728, 1737
MlsI	TGGCCA	3 cut(s)	263, 1808, 2062
MluCI	AATT	8 cut(s)	384, 517, 901, 1059, 1221, 1229, 1958, 2010
MluNI	TGGCCA	3 cut(s)	263, 1808, 2062
MlyI	GAGTC	2 cut(s)	332, 1244
MmeI	TCCRAC	1 cut(s)	1780
Mox20I	TGGCCA	3 cut(s)	263, 1808, 2062
MroXI	GAANNNNTTC	1 cut(s)	120
MscI	TGGCCA	3 cut(s)	263, 1808, 2062
MseI	TTAA	2 cut(s)	584, 1434
MslI	CAYNNNNRTG	5 cut(s)	103, 955, 1320, 1776, 2244
Msp20I	TGGCCA	3 cut(s)	263, 1808, 2062
MspA1I	CMGCKG	5 cut(s)	608, 1095, 1205, 1679, 1823
MspI	CCGG	5 cut(s)	1469, 1565, 1721, 1866, 2132
MspR9I	CCNGG	5 cut(s)	130, 974, 1469, 1565, 1752
MunI	CAATTG	3 cut(s)	384, 1958, 2010
Mva1269I	GAATGC	3 cut(s)	13, 1524, 1575
MvaI	CCWGG	3 cut(s)	130, 974, 1752
MvnI	CGCG	1 cut(s)	238
NciI	CCSGG	2 cut(s)	1469, 1565
NcoI	CCATGG	1 cut(s)	1194
NdeI	CATATG	2 cut(s)	694, 2065
NdeII	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
NheI	GCTAGC	1 cut(s)	2092
NlaIV	GGNNCC	7 cut(s)	89, 134, 474, 1558, 1667, 1725, 2043
NmuCI	GTSAC	3 cut(s)	755, 1488, 1739
NspI	RCATGY	5 cut(s)	122, 158, 533, 1036, 1050
PaeI	GCATGC	1 cut(s)	1050
PagI	TCATGA	1 cut(s)	1851
PceI	AGGCCT	1 cut(s)	1695
PciI	ACATGT	3 cut(s)	118, 154, 1032
PctI	GAATGC	3 cut(s)	13, 1524, 1575
PdmI	GAANNNNTTC	1 cut(s)	120
PfeI	GAWTC	3 cut(s)	432, 746, 986
PflFI	GACNNNGTC	1 cut(s)	1137
PleI	GAGTC	2 cut(s)	332, 1243
PpsI	GAGTC	2 cut(s)	332, 1243
PpuMI	RGGWCCY	1 cut(s)	881
PscI	ACATGT	3 cut(s)	118, 154, 1032
PshAI	GACNNNNGTC	1 cut(s)	1617
PsiI	TTATAA	2 cut(s)	428, 770
Psp124BI	GAGCTC	1 cut(s)	409
Psp5II	RGGWCCY	1 cut(s)	881
Psp6I	CCWGG	3 cut(s)	128, 972, 1750
PspFI	CCCAGC	1 cut(s)	1819
PspGI	CCWGG	3 cut(s)	128, 972, 1750
PspN4I	GGNNCC	7 cut(s)	89, 134, 474, 1558, 1667, 1725, 2043
PspPI	GGNCC	6 cut(s)	133, 826, 881, 1412, 2041, 2225
PspPPI	RGGWCCY	1 cut(s)	881
PstNI	CAGNNNCTG	1 cut(s)	973
PsuI	RGATCY	3 cut(s)	268, 913, 2134
PsyI	GACNNNGTC	1 cut(s)	1137
PvuII	CAGCTG	5 cut(s)	608, 1095, 1205, 1679, 1823
RsaI	GTAC	4 cut(s)	298, 632, 1037, 1042
RsaNI	GTAC	4 cut(s)	297, 631, 1036, 1041
RseI	CAYNNNNRTG	5 cut(s)	103, 955, 1320, 1776, 2244
SacI	GAGCTC	1 cut(s)	409
SaqAI	TTAA	2 cut(s)	584, 1434
Sau3AI	GATC	8 cut(s)	268, 866, 913, 1506, 1768, 1885, 2134, 2254
Sau96I	GGNCC	6 cut(s)	133, 826, 881, 1412, 2041, 2225
SchI	GAGTC	2 cut(s)	332, 1244
ScrFI	CCNGG	5 cut(s)	130, 974, 1469, 1565, 1752
SduI	GDGCHC	5 cut(s)	409, 475, 791, 1728, 1737
SfaNI	GCATC	3 cut(s)	1198, 1462, 2025
SinI	GGWCC	4 cut(s)	826, 881, 1412, 2041
SmiMI	CAYNNNNRTG	5 cut(s)	103, 955, 1320, 1776, 2244
SmlI	CTYRAG	4 cut(s)	1479, 1624, 1745, 2077
SmoI	CTYRAG	4 cut(s)	1479, 1624, 1745, 2077
SphI	GCATGC	1 cut(s)	1050
Sse9I	AATT	8 cut(s)	384, 517, 901, 1059, 1221, 1229, 1958, 2010
SseBI	AGGCCT	1 cut(s)	1695
SsiI	CCGC	6 cut(s)	236, 560, 835, 893, 1669, 2030
SspMI	CTAG	9 cut(s)	878, 1010, 1121, 1179, 1310, 1553, 1580, 1766, 2093
SstI	GAGCTC	1 cut(s)	409
StuI	AGGCCT	1 cut(s)	1695
StyD4I	CCNGG	5 cut(s)	128, 972, 1467, 1563, 1750
StyI	CCWWGG	5 cut(s)	183, 264, 877, 1194, 1728
TaaI	ACNGT	7 cut(s)	142, 554, 1040, 1494, 1619, 1739, 2146
TaqI	TCGA	6 cut(s)	252, 1387, 1509, 1528, 2001, 2278
TaqII	GACCGA	2 cut(s)	810, 843
TasI	AATT	8 cut(s)	384, 517, 901, 1059, 1221, 1229, 1958, 2010
TatI	WGTACW	3 cut(s)	296, 630, 1035
TauI	GCSGC	1 cut(s)	838
TfiI	GAWTC	3 cut(s)	432, 746, 986
Tru1I	TTAA	2 cut(s)	584, 1434
Tru9I	TTAA	2 cut(s)	584, 1434
TscAI	CASTG	6 cut(s)	463, 796, 1158, 1324, 1850, 2149
TseFI	GTSAC	3 cut(s)	755, 1488, 1739
Tsp45I	GTSAC	3 cut(s)	755, 1488, 1739
TspDTI	ATGAA	7 cut(s)	690, 948, 993, 1097, 1602, 2082, 2210
TspGWI	ACGGA	2 cut(s)	213, 2134
TspRI	CASTG	6 cut(s)	463, 796, 1158, 1324, 1850, 2149
Tth111I	GACNNNGTC	1 cut(s)	1137
VneI	GTGCAC	1 cut(s)	1733
VpaK11BI	GGWCC	4 cut(s)	826, 881, 1412, 2041
XapI	RAATTY	1 cut(s)	1229
XceI	RCATGY	5 cut(s)	122, 158, 533, 1036, 1050
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1650
XmaJI	CCTAGG	1 cut(s)	877
XmiI	GTMKAC	1 cut(s)	1932
XmnI	GAANNNNTTC	1 cut(s)	120
XspI	CTAG	9 cut(s)	878, 1010, 1121, 1179, 1310, 1553, 1580, 1766, 2093

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.