Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007573

Physical Location & Seq

Genomic Coordinates Forward (+)

66890209 .. 66894069

Gene Structure 3861 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51846

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGTGGTATAACAAAGGAGGTAATGCGGTGAAGATGAAAGAAGGAGGTGGAGGAGGAGGAAATGGGTTGGTAGCGGTCGCCATAGACAAGGACAAAGGGAGCCAAAATGCATTGAGGTGGGCTGCTGAGTCTATTCTCTCCCGGGGCCAAACTGTTGTTCTAATTCATGTTATTCACCGGCAAAACGCAACAAATTCATTGGCTGGAGCCAATGCCATTATCTATGATTCAAACAACCCATCTAGCTCACCGCACAAACAAAAGCTTGAAAAGATGACCAAAGATCTGTTCCTCACATTCCACTGCTATTGTACTCGAAAGGATATACAATGCCTTGATGTCATACTTGAAGATACAGATATTGGAAAAGCATTAACAGAGTATGTTTCTTATGCTGCAATTGAGACCCTGGTTCTTGGAGCTCCGTCAAAGCATGGTTTTATAAGATTCAAGTCATCAGGTATGTCAAGCAGTGTCTTAAAAGGGGCACCAGATTTCTGCACGGTATATGTCATCTCCAAAGGGAAGCCCTCTTCACAGCGAAATGCTTCTCGTGCTGCCCCATATAGATCTCCACTACTTTCCCACATTGAGTCCCTAAATAAGCAGAATGCTTCTAAAGTATCTGAAACACCTAAACACAACATATACTTGAAAGCCAAGCCATCGTTCAAGCCTCGTAACTTGCCAGATGACCCATTCAGATCGCCATTTGCTAGAGGAGGAGGAGGTTTTACTAAAGGAAGGATGAGTGGAGGATTCTCAGAATCTGAAAGTGACATATCATTTATAAGCTCAGACAGAGCAAGCACAGACCGTGCTTCATCTGTAATGTATGAGTATATTGATCAAGGCCGAGGAGGGCGGTTATCTACCAGCTCCGACCACAGCTTTGGTTCAATCCCTATAGCACCTAGGTTCGGGGACCTCAATTCTATGAATGATTTTTCGATGGTGTCTGACACCAGCCTAACATCATCTTCATGGTCATCACAAAACCTGGAGGAAGTTGAAGCTGAGATGAGGAGGCTAAAGCTAGAGTTGAAGCAAACAATGGACATGTACAGCACAGCATGTAGAGAAGCACTTACAGCTAAACAGAAGGAAATGGAGCTGAACAATTTGAAGGCTGAAGAGGAACAAAAGCTAGAGGAGGCACGACTGGCTCAAGAAGCTGCAATTGCAGTCGCTGAGAAAGAAAAAGCTAGGTGCAGGGCAGCCATGGAAGCAGCTGATGCTGCTAAGAGAATTGCAGAGTTGGAATCACAAAAACGAGCACATACAGAAATGAAAGCCCTCAGGGAAGCAGAGGAAATGAGCAAGATATTGAATAATCTAGCCAACTCTGATACCAAATACAGGAGATATAGCATTGATGAGATAGAAGCAGCAACAGAGCACTTTGCTCCAAGTCGAAAAATTGGGGAAGGAGGTTATGGTCCTGTCTATAAGTGCTATCTTGATCACACACCAGTTGCAGTCAAGGTCTTGCGTCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGATTGACATTCTCAGCTGCATTCGACATCCCAACATGGTGCTACTTCTAGGAGCCTGCCCCGAGTATGGCATTTTAGTCTATGAATATATGGCCAATGGAAGCTTAGAGGACCGTCTCAAAAGGAAAGGGAACAGCCCACCTCTATCTTGGCAACTCAGGTTTCGAATTGCAGCTGAGATTGTCACAGGTCTTCTCTTTCTCCACCAGACCAAGCCAGAACCCTTGGTGCATCGTGACCTCAAGCCCGGAAACATTTTACTGGACCACAACTTTGTAAGTAAGATCAGTGATGTTGGGTTGGCCAGACTAGTCCCAGCTGTTGCTGAAAATGTGACTCAGTACCTGATGACATCAACAGCTGGTACATTCTGCTATATAGACCCGGAGTACCAACAGACAGGAATGCTTGGTGTGAAATCTGATGTCTACTCCTTAGGCGTTATGCTCTTGCAAATGATAACATCAAGGCCACCAATGGGATTGACTCACCTCGTCGAAAGGGCTATTGAGAAGGACAAATTTGCTGAGGTTTTGGACCCTGATGTGCTTGATTGGCCTGTTGAAGAAGCCTTAAAGCTAGCAAAGCTAGCACTCCAATGCGCAGAACTCAGACGCAAAGACAGGCCAGATCTATGCAATGTTGTACTGCCAGAGCTAAGTAAGCTGAGAGAACTTGGTGAAGAAAATATGAACATCATGTTATCAGGAGGCAGTACCGGTCCTAATTCCACCATTCAATTCAATGTTTCTGATCAACAGGAAGTAATGAGTGATCCACAGCTCAAGAGCCAGTCAAGCACATCTTCACAGGCAGAAAATCAAGAGGGATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

788

Amino Acids

86.97

Weight (kDa)

6.64

Isoelectric Point (pI)

50.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	24 - 164	1.2e-08	Universal stress protein family
Pkinase	PF00069	471 - 723	5.5e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	471 - 725	2.1e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16760 AT1G16760 AT1G78940 AT1G78940 AT1G78940 AT3G20200 AT3G20200 AT3G20200 AT3G20200
fragaria_vesca	FvH4_6g36560
malus_domestica	MD09G1167400.v1.1 MD17G1161000.v1.1
prunus_persica	Prupe.3G025400_v2.0.a1 Prupe.3G025400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0149031
rosa_laevigata	RLG00000020364
rosa_multiflora	Rmu_sc0007360.1_g000003
rosa_roxburghii	Rroxscaffold_2G00098520
rosa_rugosa	Rorug02G0408600 Rorug02G0408700
rosa_samantha	Rh2BG480900 Rh2CG454400 Rh2DG489700
rosa_wichuraiana	Rw2G038130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	443, 791
Acc16I	TGCGCA	1 cut(s)	2134
AccB1I	GGYRCC	1 cut(s)	487
AccI	GTMKAC	1 cut(s)	1959
AciI	CCGC	4 cut(s)	26, 74, 251, 865
AclWI	GGATC	1 cut(s)	2300
AcoI	YGGCCR	2 cut(s)	1623, 1833
AcsI	RAATTY	2 cut(s)	193, 2051
AcuI	CTGAAG	1 cut(s)	1152
AfaI	GTAC	7 cut(s)	313, 1064, 1874, 1897, 1922, 2178, 2248
AfiI	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
AflIII	ACRYGT	1 cut(s)	1059
AgeI	ACCGGT	1 cut(s)	2249
AhlI	ACTAGT	1 cut(s)	1840
AjnI	CCWGG	2 cut(s)	408, 999
AjuI	GAANNNNNNNTTGG	6 cut(s)	141, 173, 272, 304, 653, 685
Alw21I	GWGCWC	3 cut(s)	424, 1279, 1401
Alw26I	GTCTC	2 cut(s)	398, 1652
AlwI	GGATC	1 cut(s)	2300
AlwNI	CAGNNNCTG	3 cut(s)	770, 1190, 1876
Ama87I	CYCGRG	2 cut(s)	141, 1592
AoxI	GGCC	7 cut(s)	145, 853, 1623, 1833, 2000, 2087, 2156
ApoI	RAATTY	2 cut(s)	193, 2051
ArsI	GACNNNNNNTTYG	4 cut(s)	875, 907, 1787, 1819
AsiGI	ACCGGT	1 cut(s)	2249
Asp700I	GAANNNNTTC	1 cut(s)	547
AspA2I	CCTAGG	1 cut(s)	914
AspLEI	GCGC	1 cut(s)	2135
AspS9I	GGNCC	7 cut(s)	145, 925, 1439, 1642, 1795, 2068, 2252
AsuC2I	CCSGG	4 cut(s)	142, 143, 1779, 1916
AsuHPI	GGTGA	5 cut(s)	40, 167, 240, 2012, 2222
AsuII	TTCGAA	1 cut(s)	1696
AsuNHI	GCTAGC	2 cut(s)	2110, 2119
AvaI	CYCGRG	2 cut(s)	141, 1592
AvaII	GGWCC	6 cut(s)	925, 1439, 1642, 1795, 2068, 2252
AvrII	CCTAGG	1 cut(s)	914
AxyI	CCTNAGG	2 cut(s)	1298, 1966
BaeGI	GKGCMC	1 cut(s)	490
BalI	TGGCCA	2 cut(s)	1625, 1835
BanI	GGYRCC	1 cut(s)	487
BanII	GRGCYC	1 cut(s)	424
BauI	CACGAG	1 cut(s)	552
BbsI	GAAGAC	1 cut(s)	1715
Bbv12I	GWGCWC	3 cut(s)	424, 1279, 1401
BbvCI	CCTCAGC	1 cut(s)	2058
BccI	CCATC	3 cut(s)	247, 673, 946
BciT130I	CCWGG	2 cut(s)	410, 1001
BclI	TGATCA	3 cut(s)	847, 1462, 2284
BcnI	CCSGG	4 cut(s)	142, 143, 1779, 1916
BcoDI	GTCTC	2 cut(s)	398, 1652
BcuI	ACTAGT	1 cut(s)	1840
BfmI	CTRYAG	1 cut(s)	906
BglII	AGATCT	3 cut(s)	283, 569, 2161
BlnI	CCTAGG	1 cut(s)	914
Bme1390I	CCNGG	6 cut(s)	142, 143, 410, 1001, 1779, 1916
Bme18I	GGWCC	6 cut(s)	925, 1439, 1642, 1795, 2068, 2252
BmeT110I	CYCGRG	2 cut(s)	141, 1592
BmgT120I	GGNCC	7 cut(s)	145, 925, 1439, 1642, 1795, 2068, 2252
BmiI	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
BmrFI	CCNGG	6 cut(s)	142, 143, 410, 1001, 1779, 1916
BmsI	GCATC	3 cut(s)	1225, 1489, 1771
BmtI	GCTAGC	2 cut(s)	2114, 2123
BpiI	GAAGAC	1 cut(s)	1715
BpmI	CTGGAG	2 cut(s)	225, 1022
Bpu10I	CCTNAGC	1 cut(s)	2058
Bpu14I	TTCGAA	1 cut(s)	1696
BpuEI	CTTGAG	4 cut(s)	1152, 1491, 1757, 2300
BpuMI	CCSGG	4 cut(s)	142, 143, 1779, 1916
BsaI	GGTCTC	1 cut(s)	398
BsaJI	CCNNGG	7 cut(s)	141, 142, 408, 856, 914, 1221, 1755
BsaWI	WCCGGW	1 cut(s)	2249
Bsc4I	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
Bse118I	RCCGGY	2 cut(s)	177, 2249
Bse1I	ACTGG	4 cut(s)	1167, 1472, 1797, 2323
Bse21I	CCTNAGG	2 cut(s)	1298, 1966
Bse3DI	GCAATG	1 cut(s)	2176
BseBI	CCWGG	2 cut(s)	410, 1001
BseDI	CCNNGG	7 cut(s)	141, 142, 408, 856, 914, 1221, 1755
BseGI	GGATG	2 cut(s)	753, 1558
BseLI	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
BseMI	GCAATG	1 cut(s)	2176
BseNI	ACTGG	4 cut(s)	1167, 1472, 1797, 2323
BseRI	GAGGAG	8 cut(s)	66, 69, 735, 738, 741, 873, 1039, 1166
BseSI	GKGCMC	1 cut(s)	490
BseYI	CCCAGC	1 cut(s)	1846
BsgI	GTGCAG	2 cut(s)	484, 1231
Bsh1285I	CGRYCG	1 cut(s)	78
BshFI	GGCC	7 cut(s)	147, 855, 1625, 1835, 2002, 2089, 2158
BshNI	GGYRCC	1 cut(s)	487
BshTI	ACCGGT	1 cut(s)	2249
BsiEI	CGRYCG	1 cut(s)	78
BsiHKAI	GWGCWC	3 cut(s)	424, 1279, 1401
BsiHKCI	CYCGRG	2 cut(s)	141, 1592
BsiSI	CCGG	5 cut(s)	142, 178, 1779, 1916, 2250
BslFI	GGGAC	3 cut(s)	580, 938, 1829
BslI	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
BsmAI	GTCTC	2 cut(s)	398, 1652
BsmBI	CGTCTC	1 cut(s)	1652
BsmFI	GGGAC	3 cut(s)	580, 938, 1829
BsmI	GAATGC	3 cut(s)	616, 1551, 1941
BsnI	GGCC	7 cut(s)	147, 855, 1625, 1835, 2002, 2089, 2158
Bso31I	GGTCTC	1 cut(s)	398
BsoBI	CYCGRG	2 cut(s)	141, 1592
Bsp119I	TTCGAA	1 cut(s)	1696
Bsp1286I	GDGCHC	4 cut(s)	424, 490, 1279, 1401
Bsp1407I	TGTACA	1 cut(s)	1062
Bsp19I	CCATGG	1 cut(s)	1221
BspACI	CCGC	4 cut(s)	26, 74, 251, 865
BspANI	GGCC	7 cut(s)	147, 855, 1625, 1835, 2002, 2089, 2158
BspHI	TCATGA	1 cut(s)	2363
BspLI	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
BspOI	GCTAGC	2 cut(s)	2114, 2123
BspPI	GGATC	1 cut(s)	2300
BspT104I	TTCGAA	1 cut(s)	1696
BspT107I	GGYRCC	1 cut(s)	487
BspTNI	GGTCTC	1 cut(s)	398
BsrDI	GCAATG	1 cut(s)	2176
BsrFI	RCCGGY	2 cut(s)	177, 2249
BsrGI	TGTACA	1 cut(s)	1062
BsrI	ACTGG	4 cut(s)	1167, 1472, 1797, 2323
BssAI	RCCGGY	2 cut(s)	177, 2249
BssECI	CCNNGG	7 cut(s)	141, 142, 408, 856, 914, 1221, 1755
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	3 cut(s)	914, 1221, 1755
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	2 cut(s)	410, 1001
Bst4CI	ACNGT	5 cut(s)	154, 505, 818, 1521, 1646
Bst6I	CTCTTC	2 cut(s)	538, 1128
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstAUI	TGTACA	1 cut(s)	1062
BstBI	TTCGAA	1 cut(s)	1696
BstC8I	GCNNGC	4 cut(s)	808, 1588, 2112, 2121
BstDSI	CCRYGG	1 cut(s)	1221
BstF5I	GGATG	2 cut(s)	753, 1558
BstHHI	GCGC	1 cut(s)	2135
BstMAI	GTCTC	2 cut(s)	398, 1652
BstMCI	CGRYCG	1 cut(s)	78
BstNI	CCWGG	2 cut(s)	410, 1001
BstNSI	RCATGY	2 cut(s)	1063, 1077
BstSCI	CCNGG	6 cut(s)	140, 141, 408, 999, 1777, 1914
BstSFI	CTRYAG	1 cut(s)	906
BstSLI	GKGCMC	1 cut(s)	490
BstV2I	GAAGAC	1 cut(s)	1715
BstX2I	RGATCY	3 cut(s)	283, 569, 2161
BstXI	CCANNNNNNTGG	1 cut(s)	893
BstYI	RGATCY	3 cut(s)	283, 569, 2161
Bsu36I	CCTNAGG	2 cut(s)	1298, 1966
BsuRI	GGCC	7 cut(s)	147, 855, 1625, 1835, 2002, 2089, 2158
BtgI	CCRYGG	1 cut(s)	1221
BtsCI	GGATG	2 cut(s)	753, 1558
BtsI	GCAGTG	2 cut(s)	301, 478
BtsIMutI	CAGTG	3 cut(s)	301, 478, 1825
Cac8I	GCNNGC	4 cut(s)	808, 1588, 2112, 2121
CaiI	CAGNNNCTG	3 cut(s)	770, 1190, 1876
CciI	TCATGA	1 cut(s)	2363
CfoI	GCGC	1 cut(s)	2135
Cfr10I	RCCGGY	2 cut(s)	177, 2249
Cfr13I	GGNCC	7 cut(s)	145, 925, 1439, 1642, 1795, 2068, 2252
Cfr9I	CCCGGG	1 cut(s)	141
CseI	GACGC	2 cut(s)	1481, 2154
Csp6I	GTAC	7 cut(s)	312, 1063, 1873, 1896, 1921, 2177, 2247
CspAI	ACCGGT	1 cut(s)	2249
CspCI	CAANNNNNGTGG	2 cut(s)	290, 325
CviAII	CATG	9 cut(s)	167, 434, 984, 1060, 1074, 1222, 1567, 2230, 2364
CviQI	GTAC	7 cut(s)	312, 1063, 1873, 1896, 1921, 2177, 2247
EaeI	YGGCCR	2 cut(s)	1623, 1833
Eam1104I	CTCTTC	2 cut(s)	538, 1128
EarI	CTCTTC	2 cut(s)	538, 1128
Ecl136II	GAGCTC	1 cut(s)	422
Eco130I	CCWWGG	3 cut(s)	914, 1221, 1755
Eco24I	GRGCYC	1 cut(s)	424
Eco31I	GGTCTC	1 cut(s)	398
Eco47I	GGWCC	6 cut(s)	925, 1439, 1642, 1795, 2068, 2252
Eco53kI	GAGCTC	1 cut(s)	422
Eco57I	CTGAAG	1 cut(s)	1152
Eco81I	CCTNAGG	2 cut(s)	1298, 1966
Eco88I	CYCGRG	2 cut(s)	141, 1592
EcoICRI	GAGCTC	1 cut(s)	422
EcoO109I	RGGNCCY	1 cut(s)	925
EcoRII	CCWGG	2 cut(s)	408, 999
EcoT14I	CCWWGG	3 cut(s)	914, 1221, 1755
EcoT22I	ATGCAT	1 cut(s)	112
EcoT38I	GRGCYC	1 cut(s)	424
ErhI	CCWWGG	3 cut(s)	914, 1221, 1755
Esp3I	CGTCTC	1 cut(s)	1652
FaeI	CATG	9 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2233, 2367
FalI	AAGNNNNNCTT	2 cut(s)	2320, 2352
FaqI	GGGAC	3 cut(s)	580, 938, 1829
FatI	CATG	9 cut(s)	166, 433, 983, 1059, 1073, 1221, 1566, 2229, 2363
FbaI	TGATCA	3 cut(s)	847, 1462, 2284
FblI	GTMKAC	1 cut(s)	1959
FokI	GGATG	2 cut(s)	760, 1545
FriOI	GRGCYC	1 cut(s)	424
FspI	TGCGCA	1 cut(s)	2134
GlaI	GCGC	1 cut(s)	2134
GsaI	CCCAGC	1 cut(s)	1850
GsuI	CTGGAG	2 cut(s)	225, 1022
HaeIII	GGCC	7 cut(s)	147, 855, 1625, 1835, 2002, 2089, 2158
HapII	CCGG	5 cut(s)	142, 178, 1779, 1916, 2250
HgaI	GACGC	2 cut(s)	1481, 2154
HhaI	GCGC	1 cut(s)	2135
Hin1II	CATG	9 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2233, 2367
Hin6I	GCGC	1 cut(s)	2133
HinP1I	GCGC	1 cut(s)	2133
HindIII	AAGCTT	2 cut(s)	263, 1633
HinfI	GANTC	9 cut(s)	128, 227, 447, 593, 759, 767, 1262, 1867, 2017
HpaII	CCGG	5 cut(s)	142, 178, 1779, 1916, 2250
HphI	GGTGA	5 cut(s)	40, 167, 240, 2012, 2222
Hpy166II	GTNNAC	1 cut(s)	1960
Hpy188III	TCNNGA	8 cut(s)	1169, 1460, 1496, 1766, 2238, 2317, 2354, 2364
Hpy8I	GTNNAC	1 cut(s)	1960
Hpy99I	CGWCG	1 cut(s)	2030
HpyAV	CCTTC	7 cut(s)	35, 738, 1096, 1120, 1421, 1506, 2038
HpyCH4III	ACNGT	5 cut(s)	154, 505, 818, 1521, 1646
Hsp92II	CATG	9 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2233, 2367
HspAI	GCGC	1 cut(s)	2133
Ksp22I	TGATCA	3 cut(s)	847, 1462, 2284
LmnI	GCTCC	8 cut(s)	99, 206, 419, 427, 884, 1111, 1411, 1583
LweI	GCATC	3 cut(s)	1225, 1489, 1771
MaeIII	GTNAC	6 cut(s)	680, 776, 1515, 1714, 1766, 1864
MboII	GAAGA	9 cut(s)	43, 362, 525, 972, 1145, 1715, 2108, 2225, 2328
MfeI	CAATTG	2 cut(s)	399, 1179
MflI	RGATCY	3 cut(s)	283, 569, 2161
MhlI	GDGCHC	4 cut(s)	424, 490, 1279, 1401
MlsI	TGGCCA	2 cut(s)	1625, 1835
MluNI	TGGCCA	2 cut(s)	1625, 1835
MlyI	GAGTC	4 cut(s)	137, 602, 1861, 2011
MmeI	TCCRAC	2 cut(s)	906, 1239
Mox20I	TGGCCA	2 cut(s)	1625, 1835
Mph1103I	ATGCAT	1 cut(s)	112
MroXI	GAANNNNTTC	1 cut(s)	547
MscI	TGGCCA	2 cut(s)	1625, 1835
MseI	TTAA	3 cut(s)	374, 479, 2105
MslI	CAYNNNNRTG	3 cut(s)	115, 982, 2128
Msp20I	TGGCCA	2 cut(s)	1625, 1835
MspA1I	CMGCKG	5 cut(s)	1232, 1548, 1706, 1850, 1892
MspI	CCGG	5 cut(s)	142, 178, 1779, 1916, 2250
MspR9I	CCNGG	6 cut(s)	142, 143, 410, 1001, 1779, 1916
MunI	CAATTG	2 cut(s)	399, 1179
Mva1269I	GAATGC	3 cut(s)	616, 1551, 1941
MvaI	CCWGG	2 cut(s)	410, 1001
NciI	CCSGG	4 cut(s)	142, 143, 1779, 1916
NcoI	CCATGG	1 cut(s)	1221
NheI	GCTAGC	2 cut(s)	2110, 2119
NlaIII	CATG	9 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2233, 2367
NlaIV	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
NmeAIII	GCCGAG	1 cut(s)	881
NmuCI	GTSAC	5 cut(s)	776, 1515, 1714, 1766, 1864
NsbI	TGCGCA	1 cut(s)	2134
NsiI	ATGCAT	1 cut(s)	112
NspI	RCATGY	2 cut(s)	1063, 1077
NspV	TTCGAA	1 cut(s)	1696
PagI	TCATGA	1 cut(s)	2363
PciI	ACATGT	1 cut(s)	1059
PctI	GAATGC	3 cut(s)	616, 1551, 1941
PdmI	GAANNNNTTC	1 cut(s)	547
PfeI	GAWTC	5 cut(s)	227, 447, 759, 767, 1262
PinAI	ACCGGT	1 cut(s)	2249
PleI	GAGTC	4 cut(s)	136, 601, 1861, 2011
PpsI	GAGTC	4 cut(s)	136, 601, 1861, 2011
PpuMI	RGGWCCY	1 cut(s)	925
PscI	ACATGT	1 cut(s)	1059
PsiI	TTATAA	2 cut(s)	443, 791
Psp124BI	GAGCTC	1 cut(s)	424
Psp5II	RGGWCCY	1 cut(s)	925
Psp6I	CCWGG	2 cut(s)	408, 999
PspFI	CCCAGC	1 cut(s)	1846
PspGI	CCWGG	2 cut(s)	408, 999
PspN4I	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
PspPI	GGNCC	7 cut(s)	145, 925, 1439, 1642, 1795, 2068, 2252
PspPPI	RGGWCCY	1 cut(s)	925
PstNI	CAGNNNCTG	3 cut(s)	770, 1190, 1876
PsuI	RGATCY	3 cut(s)	283, 569, 2161
PvuII	CAGCTG	5 cut(s)	1232, 1548, 1706, 1850, 1892
RsaI	GTAC	7 cut(s)	313, 1064, 1874, 1897, 1922, 2178, 2248
RsaNI	GTAC	7 cut(s)	312, 1063, 1873, 1896, 1921, 2177, 2247
RseI	CAYNNNNRTG	3 cut(s)	115, 982, 2128
SacI	GAGCTC	1 cut(s)	424
SaqAI	TTAA	3 cut(s)	374, 479, 2105
Sau96I	GGNCC	7 cut(s)	145, 925, 1439, 1642, 1795, 2068, 2252
SchI	GAGTC	4 cut(s)	137, 602, 1861, 2011
ScrFI	CCNGG	6 cut(s)	142, 143, 410, 1001, 1779, 1916
SduI	GDGCHC	4 cut(s)	424, 490, 1279, 1401
SfaNI	GCATC	3 cut(s)	1225, 1489, 1771
SfcI	CTRYAG	1 cut(s)	906
SfuI	TTCGAA	1 cut(s)	1696
SinI	GGWCC	6 cut(s)	925, 1439, 1642, 1795, 2068, 2252
SmaI	CCCGGG	1 cut(s)	143
SmiMI	CAYNNNNRTG	3 cut(s)	115, 982, 2128
SmlI	CTYRAG	4 cut(s)	1167, 1506, 1772, 2315
SmoI	CTYRAG	4 cut(s)	1167, 1506, 1772, 2315
SpeI	ACTAGT	1 cut(s)	1840
SsiI	CCGC	4 cut(s)	26, 74, 251, 865
SstI	GAGCTC	1 cut(s)	424
StyD4I	CCNGG	6 cut(s)	140, 141, 408, 999, 1777, 1914
StyI	CCWWGG	3 cut(s)	914, 1221, 1755
TaaI	ACNGT	5 cut(s)	154, 505, 818, 1521, 1646
TaqI	TCGA	6 cut(s)	316, 950, 1414, 1555, 1696, 2028
TatI	WGTACW	3 cut(s)	311, 1062, 2176
TfiI	GAWTC	5 cut(s)	227, 447, 759, 767, 1262
Tru1I	TTAA	3 cut(s)	374, 479, 2105
Tru9I	TTAA	3 cut(s)	374, 479, 2105
TscAI	CASTG	3 cut(s)	308, 478, 1825
TseFI	GTSAC	5 cut(s)	776, 1515, 1714, 1766, 1864
Tsp45I	GTSAC	5 cut(s)	776, 1515, 1714, 1766, 1864
TspDTI	ATGAA	9 cut(s)	50, 155, 186, 813, 953, 972, 1304, 1629, 2237
TspGWI	ACGGA	1 cut(s)	414
TspMI	CCCGGG	1 cut(s)	141
TspRI	CASTG	3 cut(s)	308, 478, 1825
VpaK11BI	GGWCC	6 cut(s)	925, 1439, 1642, 1795, 2068, 2252
XapI	RAATTY	2 cut(s)	193, 2051
XceI	RCATGY	2 cut(s)	1063, 1077
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1677
XmaI	CCCGGG	1 cut(s)	141
XmaJI	CCTAGG	1 cut(s)	914
XmiI	GTMKAC	1 cut(s)	1959
XmnI	GAANNNNTTC	1 cut(s)	547
Zsp2I	ATGCAT	1 cut(s)	112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.