Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007573

Physical Location & Seq

Genomic Coordinates Reverse (-)

19759536 .. 19763207

Gene Structure 3672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00098520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGTGGTATAACAAAGGAGGTAATGCGGTGAAGACGAAAGAAGGAGGTGGAGGAGGAGGAAATGGGTTGGTAGCGGTCGCCATAGACAAGGACAAAGGGAGCCAAAATGCATTGAGGTGGGCTGCTGAGTCTATTCTCTCCAGGGGCCAAACTGTTGTTCTAATTCATGTTATTCACCGGCAAAACGCAACAAATTCATTGGCTGGAGCCAATGCCATTATCTATGATTCAAACAACCCATCTAGCTCACCGCACAAACAACAGCTTGAAAAGATGACCAAAGATCTGTTCCTCACATTCCACTGCTATTGTACTCGAAAGGATATACAATGCCTTGATGTCATACTTGAAGATACAGATATTGGAAAAGCATTAACAGAGTATGTTTCTTATGCTGCAATTGAGACTCTGGTTCTTGGAGCTCCGTCAAAGCATGGTTTTATAAGATTCAGGGCATCAGGTATGTCAAGCAGTGTCTTAAAAGGGGCACCAGATTTCTGCACGGTATATGTCATCTCCAAAGGGAAGCCCTCTTCACAGCGAAATGCTTCTCGTGCTGCCCCATATAGATCTCCACTACTTTCCCACATTGAGTCCCTAAATAAGCAGAATGCTTCTAAAGTATCTGAAACACCTAAACACAACATATACTTGAAAGCCAAGCCATCGTTCAAGCCTCGTAACTTGCCAGATGACCCATTCAGATCGCCATTTGCTAGAGGAGGAGGAGGTTTTACTAAAGGAAGGATGAGTGGAGGATTCTCAGAATCTGAAAGTGACATATCATTTATAAGCTCAGACAGAGCAAGCACAGACCGTGCTTCATCTGTAATGTATGAGTATATTGATCAAGGCCGAGGAGGGCGGTTATCTACCAGCTCCGACCACAGCTTTGGTTCAATCCCTATAGCACCTAGGTTCGGGGACCTCAATTCTATGAATGATTTTTCGATGGTGTCTGACACCAGCCTAACATCATCTTCATGGTCATCACAAAACCTGGAGGAAGTTGAAGCTGAGATGAGGAGGCTAAAGCTAGAGCTGAAGCAAACAATGGACATGTACAGCACAGCATGTAGAGAAGCACTTACAGCTAAACAGAAGGAAATGGAGCTGAACAATTTGAAGGCTGAAGAGGAACAAAAGCTAGAGGAGGCACGACTGGCTCAAGAAGCTGCAATTGCAGTGGCTGAGAAAGAAAAAGCTAGGTGCAGGGCAGCCATGGAAGCAGCTGATGCTGCTAAGAGAATTGCAGAGTTGGAATCACAAAAACGAGCACATACAGAAATGAAAGCCCTCAGGGAAGCAGAGGAAATGAGCAAGATATTGAATAATCTAGCCAACTCTGATACCAAATACAGGAGATATAGCATTGATGAGATAGAAGCAGCAACAGAGCACTTTGCTCCAAGTAGAAAAATTGGGGAAGGTGGTTATGGCCCTGTCTATAAGTGCTATCTTGATCACACACCAGTTGCAGTCAAGGTCTTGCGTCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGATTGACATTCTCAGCTGCATTCGACATCCCAACATGGTGCTACTTCTAGGAGCCTGCCCCGAGTATGGCATTTTAGTCTATGAATATATGGCCAATGGAAGCTTAGAGGACCGTCTCAAAAGGAAAGGGAACAGCCCACCTCTATCTTGGCAACTCAGGTTTCGAATTGCAGCTGAGATTGCCACAGGTCTTCTCTTTCTCCACCAGACCAAGCCAGAACCCTTGGTGCATCGTGACCTCAAGCCCGGAAACATTTTACTAGACCACAACTTTGTAAGTAAGATCAGTGATGTTGGGTTGGCCAGACTAGTCCCAGCTGTTGCTGAAAATGTGACTCAGTACCTGATGACATCAACAGCTGGTACATTCTGCTATATAGACCCGGAGTACCAACAGACAGGAATGCTAGGTGTGAAATCTGATGTCTACTCCTTAGGCGTTATGCTCTTGCAAATGATAACATCAAGGCCACCAATGGGATTGACTCACCTCGTCGAAAGGGCTATTGAGAAGGACAAATTTGCTGAGGTTTTGGACCCTGATGTGCTTGATTGGCCTGTTGAAGAAGCCTTAAAGCTAGCAAAGCTAGCACTCCAATGCGCAGAACTCAGACGCAAAGACAGGCCGGATCTATGCAATGTTGTACTGCCAGAGCTAAGTAAGCTGAGAGAACTTGGTGAAGAAAATATGAACATCGTGTTATCAGGCGGCAGTACAGGTCCTAATTCCACCATTCAATTCAATGTCTCTGATCAACAGGAAGTAATGAGTGATCCACAGCTCAAGAGCCAGTCAAGCACATCTTCACAGACAGAAAATCAAGAGGGATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

788

Amino Acids

86.92

Weight (kDa)

6.51

Isoelectric Point (pI)

50.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	24 - 164	5.5e-09	Universal stress protein family
Pkinase	PF00069	471 - 723	1.2e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	471 - 725	1.4e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16760 AT1G16760 AT1G78940 AT1G78940 AT1G78940 AT3G20200 AT3G20200 AT3G20200 AT3G20200
fragaria_vesca	FvH4_6g36560
malus_domestica	MD09G1167400.v1.1 MD17G1161000.v1.1
prunus_persica	Prupe.3G025400_v2.0.a1 Prupe.3G025400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0149031
rosa_laevigata	RLG00000020364
rosa_multiflora	Rmu_sc0007360.1_g000003
rosa_roxburghii	Rroxscaffold_2G00098520
rosa_rugosa	Rorug02G0408600 Rorug02G0408700
rosa_samantha	Rh2BG480900 Rh2CG454400 Rh2DG489700
rosa_wichuraiana	Rw2G038130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	443, 791
Acc16I	TGCGCA	1 cut(s)	2134
AccB1I	GGYRCC	1 cut(s)	487
AccI	GTMKAC	1 cut(s)	1959
AciI	CCGC	5 cut(s)	26, 74, 251, 865, 2241
AclWI	GGATC	2 cut(s)	2169, 2300
AcoI	YGGCCR	2 cut(s)	1623, 1833
AcsI	RAATTY	2 cut(s)	193, 2051
AcuI	CTGAAG	2 cut(s)	1064, 1152
AfaI	GTAC	7 cut(s)	313, 1064, 1874, 1897, 1922, 2178, 2248
AfiI	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
AflIII	ACRYGT	1 cut(s)	1059
AhlI	ACTAGT	1 cut(s)	1840
AjnI	CCWGG	2 cut(s)	140, 999
AjuI	GAANNNNNNNTTGG	6 cut(s)	141, 173, 272, 304, 653, 685
Alw21I	GWGCWC	3 cut(s)	424, 1279, 1401
Alw26I	GTCTC	3 cut(s)	398, 1652, 2284
AlwI	GGATC	2 cut(s)	2169, 2300
AlwNI	CAGNNNCTG	3 cut(s)	770, 1190, 1876
Ama87I	CYCGRG	1 cut(s)	1592
AoxI	GGCC	8 cut(s)	145, 853, 1438, 1623, 1833, 2000, 2087, 2156
ApoI	RAATTY	2 cut(s)	193, 2051
ArsI	GACNNNNNNTTYG	4 cut(s)	875, 907, 1787, 1819
Asp700I	GAANNNNTTC	1 cut(s)	547
AspA2I	CCTAGG	1 cut(s)	914
AspLEI	GCGC	1 cut(s)	2135
AspS9I	GGNCC	6 cut(s)	145, 925, 1439, 1642, 2068, 2252
AsuC2I	CCSGG	2 cut(s)	1779, 1916
AsuHPI	GGTGA	5 cut(s)	40, 167, 240, 2012, 2222
AsuII	TTCGAA	1 cut(s)	1696
AsuNHI	GCTAGC	2 cut(s)	2110, 2119
AvaI	CYCGRG	1 cut(s)	1592
AvaII	GGWCC	4 cut(s)	925, 1642, 2068, 2252
AvrII	CCTAGG	1 cut(s)	914
AxyI	CCTNAGG	2 cut(s)	1298, 1966
BaeGI	GKGCMC	1 cut(s)	490
BalI	TGGCCA	2 cut(s)	1625, 1835
BanI	GGYRCC	1 cut(s)	487
BanII	GRGCYC	1 cut(s)	424
BauI	CACGAG	1 cut(s)	552
BbsI	GAAGAC	2 cut(s)	38, 1715
Bbv12I	GWGCWC	3 cut(s)	424, 1279, 1401
BbvCI	CCTCAGC	1 cut(s)	2058
BccI	CCATC	3 cut(s)	247, 673, 946
BciT130I	CCWGG	2 cut(s)	142, 1001
BclI	TGATCA	3 cut(s)	847, 1462, 2284
BcnI	CCSGG	2 cut(s)	1779, 1916
BcoDI	GTCTC	3 cut(s)	398, 1652, 2284
BcuI	ACTAGT	1 cut(s)	1840
BfmI	CTRYAG	1 cut(s)	906
BglII	AGATCT	2 cut(s)	283, 569
BlnI	CCTAGG	1 cut(s)	914
Bme1390I	CCNGG	4 cut(s)	142, 1001, 1779, 1916
Bme18I	GGWCC	4 cut(s)	925, 1642, 2068, 2252
BmeT110I	CYCGRG	1 cut(s)	1592
BmgT120I	GGNCC	6 cut(s)	145, 925, 1439, 1642, 2068, 2252
BmiI	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
BmrFI	CCNGG	4 cut(s)	142, 1001, 1779, 1916
BmsI	GCATC	4 cut(s)	464, 1225, 1489, 1771
BmtI	GCTAGC	2 cut(s)	2114, 2123
BpiI	GAAGAC	2 cut(s)	38, 1715
BpmI	CTGGAG	3 cut(s)	124, 225, 1022
Bpu10I	CCTNAGC	1 cut(s)	2058
Bpu14I	TTCGAA	1 cut(s)	1696
BpuEI	CTTGAG	4 cut(s)	1152, 1491, 1757, 2300
BpuMI	CCSGG	2 cut(s)	1779, 1916
BsaJI	CCNNGG	5 cut(s)	141, 856, 914, 1221, 1755
Bsc4I	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
Bse118I	RCCGGY	1 cut(s)	177
Bse1I	ACTGG	3 cut(s)	1167, 1472, 2323
Bse21I	CCTNAGG	2 cut(s)	1298, 1966
Bse3DI	GCAATG	1 cut(s)	2176
BseBI	CCWGG	2 cut(s)	142, 1001
BseDI	CCNNGG	5 cut(s)	141, 856, 914, 1221, 1755
BseGI	GGATG	2 cut(s)	753, 1558
BseLI	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
BseMI	GCAATG	1 cut(s)	2176
BseNI	ACTGG	3 cut(s)	1167, 1472, 2323
BseRI	GAGGAG	8 cut(s)	66, 69, 735, 738, 741, 873, 1039, 1166
BseSI	GKGCMC	1 cut(s)	490
BseYI	CCCAGC	1 cut(s)	1846
BsgI	GTGCAG	2 cut(s)	484, 1231
Bsh1285I	CGRYCG	1 cut(s)	78
BshFI	GGCC	8 cut(s)	147, 855, 1440, 1625, 1835, 2002, 2089, 2158
BshNI	GGYRCC	1 cut(s)	487
BsiEI	CGRYCG	1 cut(s)	78
BsiHKAI	GWGCWC	3 cut(s)	424, 1279, 1401
BsiHKCI	CYCGRG	1 cut(s)	1592
BsiSI	CCGG	4 cut(s)	178, 1779, 1916, 2159
BslFI	GGGAC	3 cut(s)	580, 938, 1829
BslI	CCNNNNNNNGG	4 cut(s)	920, 1359, 1598, 2009
BsmAI	GTCTC	3 cut(s)	398, 1652, 2284
BsmBI	CGTCTC	1 cut(s)	1652
BsmFI	GGGAC	3 cut(s)	580, 938, 1829
BsmI	GAATGC	3 cut(s)	616, 1551, 1941
BsnI	GGCC	8 cut(s)	147, 855, 1440, 1625, 1835, 2002, 2089, 2158
BsoBI	CYCGRG	1 cut(s)	1592
Bsp119I	TTCGAA	1 cut(s)	1696
Bsp1286I	GDGCHC	4 cut(s)	424, 490, 1279, 1401
Bsp1407I	TGTACA	1 cut(s)	1062
Bsp19I	CCATGG	1 cut(s)	1221
BspACI	CCGC	5 cut(s)	26, 74, 251, 865, 2241
BspANI	GGCC	8 cut(s)	147, 855, 1440, 1625, 1835, 2002, 2089, 2158
BspHI	TCATGA	1 cut(s)	2363
BspLI	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
BspOI	GCTAGC	2 cut(s)	2114, 2123
BspPI	GGATC	2 cut(s)	2169, 2300
BspT104I	TTCGAA	1 cut(s)	1696
BspT107I	GGYRCC	1 cut(s)	487
BsrDI	GCAATG	1 cut(s)	2176
BsrFI	RCCGGY	1 cut(s)	177
BsrGI	TGTACA	1 cut(s)	1062
BsrI	ACTGG	3 cut(s)	1167, 1472, 2323
BssAI	RCCGGY	1 cut(s)	177
BssECI	CCNNGG	5 cut(s)	141, 856, 914, 1221, 1755
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	3 cut(s)	914, 1221, 1755
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	2 cut(s)	142, 1001
Bst4CI	ACNGT	5 cut(s)	154, 505, 818, 1521, 1646
Bst6I	CTCTTC	2 cut(s)	538, 1128
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstAUI	TGTACA	1 cut(s)	1062
BstBI	TTCGAA	1 cut(s)	1696
BstC8I	GCNNGC	4 cut(s)	808, 1588, 2112, 2121
BstDSI	CCRYGG	1 cut(s)	1221
BstF5I	GGATG	2 cut(s)	753, 1558
BstHHI	GCGC	1 cut(s)	2135
BstMAI	GTCTC	3 cut(s)	398, 1652, 2284
BstMCI	CGRYCG	1 cut(s)	78
BstNI	CCWGG	2 cut(s)	142, 1001
BstNSI	RCATGY	2 cut(s)	1063, 1077
BstSCI	CCNGG	4 cut(s)	140, 999, 1777, 1914
BstSFI	CTRYAG	1 cut(s)	906
BstSLI	GKGCMC	1 cut(s)	490
BstV2I	GAAGAC	2 cut(s)	38, 1715
BstX2I	RGATCY	3 cut(s)	283, 569, 2161
BstXI	CCANNNNNNTGG	1 cut(s)	893
BstYI	RGATCY	3 cut(s)	283, 569, 2161
Bsu36I	CCTNAGG	2 cut(s)	1298, 1966
BsuRI	GGCC	8 cut(s)	147, 855, 1440, 1625, 1835, 2002, 2089, 2158
BtgI	CCRYGG	1 cut(s)	1221
BtsCI	GGATG	2 cut(s)	753, 1558
BtsI	GCAGTG	3 cut(s)	301, 478, 1191
BtsIMutI	CAGTG	4 cut(s)	301, 478, 1191, 1825
Cac8I	GCNNGC	4 cut(s)	808, 1588, 2112, 2121
CaiI	CAGNNNCTG	3 cut(s)	770, 1190, 1876
CciI	TCATGA	1 cut(s)	2363
CfoI	GCGC	1 cut(s)	2135
Cfr10I	RCCGGY	1 cut(s)	177
Cfr13I	GGNCC	6 cut(s)	145, 925, 1439, 1642, 2068, 2252
CseI	GACGC	2 cut(s)	1481, 2154
Csp6I	GTAC	7 cut(s)	312, 1063, 1873, 1896, 1921, 2177, 2247
CspCI	CAANNNNNGTGG	4 cut(s)	290, 325, 1167, 1202
CviAII	CATG	8 cut(s)	167, 434, 984, 1060, 1074, 1222, 1567, 2364
CviQI	GTAC	7 cut(s)	312, 1063, 1873, 1896, 1921, 2177, 2247
EaeI	YGGCCR	2 cut(s)	1623, 1833
Eam1104I	CTCTTC	2 cut(s)	538, 1128
EarI	CTCTTC	2 cut(s)	538, 1128
Ecl136II	GAGCTC	1 cut(s)	422
Eco130I	CCWWGG	3 cut(s)	914, 1221, 1755
Eco24I	GRGCYC	1 cut(s)	424
Eco47I	GGWCC	4 cut(s)	925, 1642, 2068, 2252
Eco53kI	GAGCTC	1 cut(s)	422
Eco57I	CTGAAG	2 cut(s)	1064, 1152
Eco81I	CCTNAGG	2 cut(s)	1298, 1966
Eco88I	CYCGRG	1 cut(s)	1592
EcoICRI	GAGCTC	1 cut(s)	422
EcoO109I	RGGNCCY	2 cut(s)	925, 2252
EcoRII	CCWGG	2 cut(s)	140, 999
EcoT14I	CCWWGG	3 cut(s)	914, 1221, 1755
EcoT22I	ATGCAT	1 cut(s)	112
EcoT38I	GRGCYC	1 cut(s)	424
ErhI	CCWWGG	3 cut(s)	914, 1221, 1755
Esp3I	CGTCTC	1 cut(s)	1652
FaeI	CATG	8 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2367
FalI	AAGNNNNNCTT	2 cut(s)	2320, 2352
FaqI	GGGAC	3 cut(s)	580, 938, 1829
FatI	CATG	8 cut(s)	166, 433, 983, 1059, 1073, 1221, 1566, 2363
FbaI	TGATCA	3 cut(s)	847, 1462, 2284
FblI	GTMKAC	1 cut(s)	1959
FokI	GGATG	2 cut(s)	760, 1545
FriOI	GRGCYC	1 cut(s)	424
FspI	TGCGCA	1 cut(s)	2134
GlaI	GCGC	1 cut(s)	2134
GsaI	CCCAGC	1 cut(s)	1850
GsuI	CTGGAG	3 cut(s)	124, 225, 1022
HaeIII	GGCC	8 cut(s)	147, 855, 1440, 1625, 1835, 2002, 2089, 2158
HapII	CCGG	4 cut(s)	178, 1779, 1916, 2159
HgaI	GACGC	2 cut(s)	1481, 2154
HhaI	GCGC	1 cut(s)	2135
Hin1II	CATG	8 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2367
Hin6I	GCGC	1 cut(s)	2133
HinP1I	GCGC	1 cut(s)	2133
HindIII	AAGCTT	1 cut(s)	1633
HpaII	CCGG	4 cut(s)	178, 1779, 1916, 2159
HphI	GGTGA	5 cut(s)	40, 167, 240, 2012, 2222
Hpy166II	GTNNAC	1 cut(s)	1960
Hpy188III	TCNNGA	7 cut(s)	1169, 1460, 1496, 1766, 2317, 2354, 2364
Hpy8I	GTNNAC	1 cut(s)	1960
Hpy99I	CGWCG	1 cut(s)	2030
HpyAV	CCTTC	7 cut(s)	35, 738, 1096, 1120, 1421, 1506, 2038
HpyCH4III	ACNGT	5 cut(s)	154, 505, 818, 1521, 1646
Hsp92II	CATG	8 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2367
HspAI	GCGC	1 cut(s)	2133
Ksp22I	TGATCA	3 cut(s)	847, 1462, 2284
LmnI	GCTCC	8 cut(s)	99, 206, 419, 427, 884, 1111, 1411, 1583
LweI	GCATC	4 cut(s)	464, 1225, 1489, 1771
MaeIII	GTNAC	5 cut(s)	680, 776, 1515, 1766, 1864
MboII	GAAGA	9 cut(s)	43, 362, 525, 972, 1145, 1715, 2108, 2225, 2328
MfeI	CAATTG	2 cut(s)	399, 1179
MflI	RGATCY	3 cut(s)	283, 569, 2161
MhlI	GDGCHC	4 cut(s)	424, 490, 1279, 1401
MlsI	TGGCCA	2 cut(s)	1625, 1835
MluNI	TGGCCA	2 cut(s)	1625, 1835
MlyI	GAGTC	5 cut(s)	137, 400, 602, 1861, 2011
MmeI	TCCRAC	2 cut(s)	906, 1239
Mox20I	TGGCCA	2 cut(s)	1625, 1835
Mph1103I	ATGCAT	1 cut(s)	112
MroXI	GAANNNNTTC	1 cut(s)	547
MscI	TGGCCA	2 cut(s)	1625, 1835
MseI	TTAA	3 cut(s)	374, 479, 2105
MslI	CAYNNNNRTG	3 cut(s)	115, 982, 2128
Msp20I	TGGCCA	2 cut(s)	1625, 1835
MspA1I	CMGCKG	5 cut(s)	1232, 1548, 1706, 1850, 1892
MspI	CCGG	4 cut(s)	178, 1779, 1916, 2159
MspR9I	CCNGG	4 cut(s)	142, 1001, 1779, 1916
MunI	CAATTG	2 cut(s)	399, 1179
Mva1269I	GAATGC	3 cut(s)	616, 1551, 1941
MvaI	CCWGG	2 cut(s)	142, 1001
NciI	CCSGG	2 cut(s)	1779, 1916
NcoI	CCATGG	1 cut(s)	1221
NheI	GCTAGC	2 cut(s)	2110, 2119
NlaIII	CATG	8 cut(s)	170, 437, 987, 1063, 1077, 1225, 1570, 2367
NlaIV	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
NmeAIII	GCCGAG	1 cut(s)	881
NmuCI	GTSAC	4 cut(s)	776, 1515, 1766, 1864
NsbI	TGCGCA	1 cut(s)	2134
NsiI	ATGCAT	1 cut(s)	112
NspI	RCATGY	2 cut(s)	1063, 1077
NspV	TTCGAA	1 cut(s)	1696
PagI	TCATGA	1 cut(s)	2363
PciI	ACATGT	1 cut(s)	1059
PctI	GAATGC	3 cut(s)	616, 1551, 1941
PdmI	GAANNNNTTC	1 cut(s)	547
PfeI	GAWTC	5 cut(s)	227, 447, 759, 767, 1262
PleI	GAGTC	5 cut(s)	136, 400, 601, 1861, 2011
PpsI	GAGTC	5 cut(s)	136, 400, 601, 1861, 2011
PpuMI	RGGWCCY	2 cut(s)	925, 2252
PscI	ACATGT	1 cut(s)	1059
PsiI	TTATAA	2 cut(s)	443, 791
Psp124BI	GAGCTC	1 cut(s)	424
Psp5II	RGGWCCY	2 cut(s)	925, 2252
Psp6I	CCWGG	2 cut(s)	140, 999
PspFI	CCCAGC	1 cut(s)	1846
PspGI	CCWGG	2 cut(s)	140, 999
PspN4I	GGNNCC	7 cut(s)	101, 146, 208, 489, 926, 1585, 2070
PspPI	GGNCC	6 cut(s)	145, 925, 1439, 1642, 2068, 2252
PspPPI	RGGWCCY	2 cut(s)	925, 2252
PstNI	CAGNNNCTG	3 cut(s)	770, 1190, 1876
PsuI	RGATCY	3 cut(s)	283, 569, 2161
PvuII	CAGCTG	5 cut(s)	1232, 1548, 1706, 1850, 1892
RsaI	GTAC	7 cut(s)	313, 1064, 1874, 1897, 1922, 2178, 2248
RsaNI	GTAC	7 cut(s)	312, 1063, 1873, 1896, 1921, 2177, 2247
RseI	CAYNNNNRTG	3 cut(s)	115, 982, 2128
SacI	GAGCTC	1 cut(s)	424
SaqAI	TTAA	3 cut(s)	374, 479, 2105
Sau96I	GGNCC	6 cut(s)	145, 925, 1439, 1642, 2068, 2252
SchI	GAGTC	5 cut(s)	137, 400, 602, 1861, 2011
ScrFI	CCNGG	4 cut(s)	142, 1001, 1779, 1916
SduI	GDGCHC	4 cut(s)	424, 490, 1279, 1401
SfaNI	GCATC	4 cut(s)	464, 1225, 1489, 1771
SfcI	CTRYAG	1 cut(s)	906
SfuI	TTCGAA	1 cut(s)	1696
SinI	GGWCC	4 cut(s)	925, 1642, 2068, 2252
SmiMI	CAYNNNNRTG	3 cut(s)	115, 982, 2128
SmlI	CTYRAG	4 cut(s)	1167, 1506, 1772, 2315
SmoI	CTYRAG	4 cut(s)	1167, 1506, 1772, 2315
SpeI	ACTAGT	1 cut(s)	1840
SsiI	CCGC	5 cut(s)	26, 74, 251, 865, 2241
SstI	GAGCTC	1 cut(s)	424
StyD4I	CCNGG	4 cut(s)	140, 999, 1777, 1914
StyI	CCWWGG	3 cut(s)	914, 1221, 1755
TaaI	ACNGT	5 cut(s)	154, 505, 818, 1521, 1646
TaqI	TCGA	5 cut(s)	316, 950, 1555, 1696, 2028
TatI	WGTACW	4 cut(s)	311, 1062, 2176, 2246
TauI	GCSGC	1 cut(s)	2244
TfiI	GAWTC	5 cut(s)	227, 447, 759, 767, 1262
Tru1I	TTAA	3 cut(s)	374, 479, 2105
Tru9I	TTAA	3 cut(s)	374, 479, 2105
TscAI	CASTG	4 cut(s)	308, 478, 1191, 1825
TseFI	GTSAC	4 cut(s)	776, 1515, 1766, 1864
Tsp45I	GTSAC	4 cut(s)	776, 1515, 1766, 1864
TspDTI	ATGAA	8 cut(s)	155, 186, 813, 953, 972, 1304, 1629, 2237
TspGWI	ACGGA	1 cut(s)	414
TspRI	CASTG	4 cut(s)	308, 478, 1191, 1825
VpaK11BI	GGWCC	4 cut(s)	925, 1642, 2068, 2252
XapI	RAATTY	2 cut(s)	193, 2051
XceI	RCATGY	2 cut(s)	1063, 1077
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1677
XmaJI	CCTAGG	1 cut(s)	914
XmiI	GTMKAC	1 cut(s)	1959
XmnI	GAANNNNTTC	1 cut(s)	547
Zsp2I	ATGCAT	1 cut(s)	112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.