Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0007573

Physical Location & Seq

Genomic Coordinates Forward (+)

71001319 .. 71006010

Gene Structure 4692 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG489700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGTCAAGCAGTGTCTTAAAAGGGGCACCAGATTTCTGCACGGTGTATGTCATCTCCAAAGGGAAGCCCTCTTCACAGCGAAATGCTTCTCGTGCTGCCCCATATAGATCTCCACTACTTTCCCACATTGAGTCCCTAAATAAGCAGAATGCTTCTAAAGTATCTGAAACACCTAAACACAACATATACTTGAAAGCCAAGCCATCGTTCAAGCCTCGTAACTTGCCAGATGACCCATTCAGATCGCCATTTGCTAGAGGAGGAGGAGGTTTTACTAAAGGAAGGATGAGTGGAGGATTCTCAGAATCTGAAAGTGACATTTCATTTATAAGCTCAGACAGAGCAAGCACAGACCGTGCTTCATCTGTAATGTATGAGTATATTGATCAAGGCCGAGGAGGGCGGTTATCTACCAGCTCCGACCACAGCTTTGGTTCAATCCCTATAGCTCCTAGGTTCGGGGACCTCAATTCTATGAATGATTTTTCGATGGTGTCTGACACCAGCCTAACATCATCTTCATGGTCATCACAAAACCTGGAGGAAGTTGAAGCTGAGATGAGGAGGCTAAAGCTAGAGCTGAAGCAAACAATGGACATGTACAGCACAGCATGTAGAGAAGCACTTACAGCTAAACAGAAGGAAATGGAGCTGAACAATTTGAAGGCTGAAGAGGAACAAAAGCTAGAGGAGGCACGACTGGCTCAAGAAGCTGCAATTGCAGTCGCTGAGAAAGAAAAAGCTAGGTGCAGGGCAGCCATGGAAGCAGCTGATGCTGCTAAGAGAATTGCAGAGTTGGAATCACAAAAACGAGCACATACAGAAATGAAAGCCCTCAGGGAAGCAGAGGAAATGAGCAAGATATTGAATAATCTAGCCAACTCTGATACCAAATACAGGAGATATAGCATTGATGAGATAGAAGCAGCAACAGAGCACTTTGCTCCAAGCCGAAAAATTGGGGAAGGAGGTTATGGTCCTGTCTATAAGTGCTATCTTGATCACACACCAGTTGCAGTCAAGGTCTTGCGTCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGATTGACATTCTCAGCTGCATTCGACATCCCAACATGGTGCTACTTCTAGGAGCCTGCCCCGAGTATGGCATTTTAGTCTATGAATATATGGCCAATGGAAGCTTAGAGGACCGTCTCAAAAGGAAAGGGAACAGCCCACCTCTATCTTGGCAACTCAGGTTTCGAATTGCAGCTGAGATTGCCACAGGTCTTCTCTTTCTCCACCAGACCAAGCCAGAACCCTTGGTGCATCGTGACCTCAAGCCCGGAAACATTTTACTGGACCACAACTTTGTAAGTAAGATCAGTGATGTTGGGTTGGCCAGACTAGTCCCAGCTGTTGCTGAAAATGTGACTCAGTACCTGATGACATCAACAGCTGGTACATTCTGCTATATAGACCCGGAGTACCAACAGACAGGAATGCTTGGTGTGAAATCTGATGTCTACTCCTTGGGCGTTATGCTCTTGCAAACGATAACATCAAGGCCACCAATGGGATTGACTCACCTCGTCGAAAGGGCTATTGAGAAGGACAAATTTGCTGAGGTTTTGGACCCTGATGTGCTTGATTGGCCTGTTGAAGAAGCCTTAAAGCTAGCAAAGCTAGCACTCCAATGCGCAGAACTCAGACGCAAAGACAGGCCAGATCTATGCAATGTTGTACTGCCAGAGCTAAGTAAGCTGAGAGAACTTGGTGAAGAAAATATGAACATCATGTTATCAGGAGGCAGTACCGGTCCTAATTCCACCATTCAATTCAATGTTTCTGATCAACAGGAAGTAATGAGTGATCCACAGCTCAAGAGCCAGTCAAGCACATCTTCACAGGCAGAAAATCAAGAGGGATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

634

Amino Acids

70.27

Weight (kDa)

6.01

Isoelectric Point (pI)

51.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	317 - 569	6.8e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	317 - 571	3.8e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16760 AT1G16760 AT1G78940 AT1G78940 AT1G78940 AT3G20200 AT3G20200 AT3G20200 AT3G20200
fragaria_vesca	FvH4_6g36560
malus_domestica	MD09G1167400.v1.1 MD17G1161000.v1.1
prunus_persica	Prupe.3G025400_v2.0.a1 Prupe.3G025400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0149031
rosa_laevigata	RLG00000020364
rosa_multiflora	Rmu_sc0007360.1_g000003
rosa_roxburghii	Rroxscaffold_2G00098520
rosa_rugosa	Rorug02G0408600 Rorug02G0408700
rosa_samantha	Rh2BG480900 Rh2CG454400 Rh2DG489700
rosa_wichuraiana	Rw2G038130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	329
Acc16I	TGCGCA	1 cut(s)	1672
AccB1I	GGYRCC	1 cut(s)	25
AccI	GTMKAC	1 cut(s)	1497
AciI	CCGC	1 cut(s)	403
AclWI	GGATC	1 cut(s)	1838
AcoI	YGGCCR	2 cut(s)	1161, 1371
AcsI	RAATTY	1 cut(s)	1589
AcuI	CTGAAG	2 cut(s)	602, 690
AfaI	GTAC	6 cut(s)	602, 1412, 1435, 1460, 1716, 1786
AfiI	CCNNNNNNNGG	4 cut(s)	458, 897, 1136, 1547
AflIII	ACRYGT	1 cut(s)	597
AgeI	ACCGGT	1 cut(s)	1787
AgsI	TTSAA	9 cut(s)	193, 211, 438, 551, 664, 868, 1634, 1808, 1813
AhlI	ACTAGT	1 cut(s)	1378
AjnI	CCWGG	1 cut(s)	537
AjuI	GAANNNNNNNTTGG	2 cut(s)	191, 223
Alw21I	GWGCWC	2 cut(s)	817, 939
Alw26I	GTCTC	1 cut(s)	1190
AlwI	GGATC	1 cut(s)	1838
AlwNI	CAGNNNCTG	3 cut(s)	308, 728, 1414
Ama87I	CYCGRG	1 cut(s)	1130
AoxI	GGCC	6 cut(s)	391, 1161, 1371, 1538, 1625, 1694
ApeKI	GCWGC	9 cut(s)	95, 713, 755, 767, 776, 926, 1040, 1086, 1241
ApoI	RAATTY	1 cut(s)	1589
ArsI	GACNNNNNNTTYG	4 cut(s)	413, 445, 1325, 1357
AsiGI	ACCGGT	1 cut(s)	1787
Asp700I	GAANNNNTTC	1 cut(s)	85
AspA2I	CCTAGG	1 cut(s)	452
AspLEI	GCGC	1 cut(s)	1673
AspS9I	GGNCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
AsuC2I	CCSGG	2 cut(s)	1317, 1454
AsuHPI	GGTGA	2 cut(s)	1550, 1760
AsuII	TTCGAA	1 cut(s)	1234
AsuNHI	GCTAGC	2 cut(s)	1648, 1657
AvaI	CYCGRG	1 cut(s)	1130
AvaII	GGWCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
AvrII	CCTAGG	1 cut(s)	452
AxyI	CCTNAGG	1 cut(s)	836
BaeGI	GKGCMC	1 cut(s)	28
BalI	TGGCCA	2 cut(s)	1163, 1373
BanI	GGYRCC	1 cut(s)	25
BauI	CACGAG	1 cut(s)	90
BbsI	GAAGAC	1 cut(s)	1253
Bbv12I	GWGCWC	2 cut(s)	817, 939
BbvCI	CCTCAGC	1 cut(s)	1596
BbvI	GCAGC	9 cut(s)	82, 700, 763, 767, 779, 938, 1052, 1073, 1253
BccI	CCATC	2 cut(s)	211, 484
BciT130I	CCWGG	1 cut(s)	539
BclI	TGATCA	3 cut(s)	385, 1000, 1822
BcnI	CCSGG	2 cut(s)	1317, 1454
BcoDI	GTCTC	1 cut(s)	1190
BcuI	ACTAGT	1 cut(s)	1378
BfmI	CTRYAG	1 cut(s)	444
BglII	AGATCT	2 cut(s)	107, 1699
BisI	GCNGC	9 cut(s)	96, 714, 756, 768, 777, 927, 1041, 1087, 1242
BlnI	CCTAGG	1 cut(s)	452
BlsI	GCNGC	9 cut(s)	97, 715, 757, 769, 778, 928, 1042, 1088, 1243
Bme1390I	CCNGG	3 cut(s)	539, 1317, 1454
Bme18I	GGWCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
BmeT110I	CYCGRG	1 cut(s)	1130
BmgT120I	GGNCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
BmiI	GGNNCC	4 cut(s)	27, 464, 1123, 1608
BmrFI	CCNGG	3 cut(s)	539, 1317, 1454
BmsI	GCATC	3 cut(s)	763, 1027, 1309
BmtI	GCTAGC	2 cut(s)	1652, 1661
BpiI	GAAGAC	1 cut(s)	1253
BpmI	CTGGAG	1 cut(s)	560
Bpu10I	CCTNAGC	1 cut(s)	1596
Bpu14I	TTCGAA	1 cut(s)	1234
BpuEI	CTTGAG	4 cut(s)	690, 1029, 1295, 1838
BpuMI	CCSGG	2 cut(s)	1317, 1454
BsaJI	CCNNGG	5 cut(s)	394, 452, 759, 1293, 1503
BsaWI	WCCGGW	1 cut(s)	1787
Bsc4I	CCNNNNNNNGG	4 cut(s)	458, 897, 1136, 1547
Bse118I	RCCGGY	1 cut(s)	1787
Bse1I	ACTGG	4 cut(s)	705, 1010, 1335, 1861
Bse21I	CCTNAGG	1 cut(s)	836
Bse3DI	GCAATG	1 cut(s)	1714
BseBI	CCWGG	1 cut(s)	539
BseDI	CCNNGG	5 cut(s)	394, 452, 759, 1293, 1503
BseGI	GGATG	2 cut(s)	291, 1096
BseLI	CCNNNNNNNGG	4 cut(s)	458, 897, 1136, 1547
BseMI	GCAATG	1 cut(s)	1714
BseNI	ACTGG	4 cut(s)	705, 1010, 1335, 1861
BseRI	GAGGAG	6 cut(s)	273, 276, 279, 411, 577, 704
BseSI	GKGCMC	1 cut(s)	28
BseXI	GCAGC	9 cut(s)	82, 700, 763, 767, 779, 938, 1052, 1073, 1253
BseYI	CCCAGC	1 cut(s)	1384
BsgI	GTGCAG	2 cut(s)	22, 769
BshFI	GGCC	6 cut(s)	393, 1163, 1373, 1540, 1627, 1696
BshNI	GGYRCC	1 cut(s)	25
BshTI	ACCGGT	1 cut(s)	1787
BsiHKAI	GWGCWC	2 cut(s)	817, 939
BsiHKCI	CYCGRG	1 cut(s)	1130
BsiSI	CCGG	3 cut(s)	1317, 1454, 1788
BslFI	GGGAC	3 cut(s)	118, 476, 1367
BslI	CCNNNNNNNGG	4 cut(s)	458, 897, 1136, 1547
BsmAI	GTCTC	1 cut(s)	1190
BsmBI	CGTCTC	1 cut(s)	1190
BsmFI	GGGAC	3 cut(s)	118, 476, 1367
BsmI	GAATGC	3 cut(s)	154, 1089, 1479
BsnI	GGCC	6 cut(s)	393, 1163, 1373, 1540, 1627, 1696
BsoBI	CYCGRG	1 cut(s)	1130
Bsp119I	TTCGAA	1 cut(s)	1234
Bsp1286I	GDGCHC	3 cut(s)	28, 817, 939
Bsp1407I	TGTACA	1 cut(s)	600
Bsp143I	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
Bsp19I	CCATGG	1 cut(s)	759
BspACI	CCGC	1 cut(s)	403
BspANI	GGCC	6 cut(s)	393, 1163, 1373, 1540, 1627, 1696
BspHI	TCATGA	1 cut(s)	1901
BspLI	GGNNCC	4 cut(s)	27, 464, 1123, 1608
BspOI	GCTAGC	2 cut(s)	1652, 1661
BspPI	GGATC	1 cut(s)	1838
BspT104I	TTCGAA	1 cut(s)	1234
BspT107I	GGYRCC	1 cut(s)	25
BsrDI	GCAATG	1 cut(s)	1714
BsrFI	RCCGGY	1 cut(s)	1787
BsrGI	TGTACA	1 cut(s)	600
BsrI	ACTGG	4 cut(s)	705, 1010, 1335, 1861
BssAI	RCCGGY	1 cut(s)	1787
BssECI	CCNNGG	5 cut(s)	394, 452, 759, 1293, 1503
BssMI	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
BssSI	CACGAG	1 cut(s)	90
BssT1I	CCWWGG	4 cut(s)	452, 759, 1293, 1503
Bst2BI	CACGAG	1 cut(s)	90
Bst2UI	CCWGG	1 cut(s)	539
Bst4CI	ACNGT	4 cut(s)	43, 356, 1059, 1184
Bst6I	CTCTTC	2 cut(s)	76, 666
BstAPI	GCANNNNNTGC	1 cut(s)	773
BstAUI	TGTACA	1 cut(s)	600
BstBI	TTCGAA	1 cut(s)	1234
BstC8I	GCNNGC	4 cut(s)	346, 1126, 1650, 1659
BstDSI	CCRYGG	1 cut(s)	759
BstF5I	GGATG	2 cut(s)	291, 1096
BstHHI	GCGC	1 cut(s)	1673
BstKTI	GATC	9 cut(s)	110, 245, 388, 1003, 1356, 1702, 1825, 1846, 1901
BstMAI	GTCTC	1 cut(s)	1190
BstMBI	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
BstNI	CCWGG	1 cut(s)	539
BstNSI	RCATGY	2 cut(s)	601, 615
BstSCI	CCNGG	3 cut(s)	537, 1315, 1452
BstSFI	CTRYAG	1 cut(s)	444
BstSLI	GKGCMC	1 cut(s)	28
BstV1I	GCAGC	9 cut(s)	82, 700, 763, 767, 779, 938, 1052, 1073, 1253
BstV2I	GAAGAC	1 cut(s)	1253
BstX2I	RGATCY	2 cut(s)	107, 1699
BstXI	CCANNNNNNTGG	1 cut(s)	431
BstYI	RGATCY	2 cut(s)	107, 1699
Bsu36I	CCTNAGG	1 cut(s)	836
BsuRI	GGCC	6 cut(s)	393, 1163, 1373, 1540, 1627, 1696
BtgI	CCRYGG	1 cut(s)	759
BtsCI	GGATG	2 cut(s)	291, 1096
BtsI	GCAGTG	1 cut(s)	16
BtsIMutI	CAGTG	2 cut(s)	16, 1363
Cac8I	GCNNGC	4 cut(s)	346, 1126, 1650, 1659
CaiI	CAGNNNCTG	3 cut(s)	308, 728, 1414
CciI	TCATGA	1 cut(s)	1901
CfoI	GCGC	1 cut(s)	1673
Cfr10I	RCCGGY	1 cut(s)	1787
Cfr13I	GGNCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
CseI	GACGC	2 cut(s)	1019, 1692
Csp6I	GTAC	6 cut(s)	601, 1411, 1434, 1459, 1715, 1785
CspAI	ACCGGT	1 cut(s)	1787
CviAII	CATG	7 cut(s)	522, 598, 612, 760, 1105, 1768, 1902
CviQI	GTAC	6 cut(s)	601, 1411, 1434, 1459, 1715, 1785
DpnI	GATC	9 cut(s)	109, 244, 387, 1002, 1355, 1701, 1824, 1845, 1900
DpnII	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
EaeI	YGGCCR	2 cut(s)	1161, 1371
Eam1104I	CTCTTC	2 cut(s)	76, 666
EarI	CTCTTC	2 cut(s)	76, 666
Eco130I	CCWWGG	4 cut(s)	452, 759, 1293, 1503
Eco47I	GGWCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
Eco57I	CTGAAG	2 cut(s)	602, 690
Eco81I	CCTNAGG	1 cut(s)	836
Eco88I	CYCGRG	1 cut(s)	1130
EcoO109I	RGGNCCY	1 cut(s)	463
EcoRII	CCWGG	1 cut(s)	537
EcoT14I	CCWWGG	4 cut(s)	452, 759, 1293, 1503
ErhI	CCWWGG	4 cut(s)	452, 759, 1293, 1503
Esp3I	CGTCTC	1 cut(s)	1190
FaeI	CATG	7 cut(s)	525, 601, 615, 763, 1108, 1771, 1905
FalI	AAGNNNNNCTT	2 cut(s)	1858, 1890
FaqI	GGGAC	3 cut(s)	118, 476, 1367
FatI	CATG	7 cut(s)	521, 597, 611, 759, 1104, 1767, 1901
FbaI	TGATCA	3 cut(s)	385, 1000, 1822
FblI	GTMKAC	1 cut(s)	1497
Fnu4HI	GCNGC	9 cut(s)	96, 714, 756, 768, 777, 927, 1041, 1087, 1242
FokI	GGATG	2 cut(s)	298, 1083
Fsp4HI	GCNGC	9 cut(s)	96, 714, 756, 768, 777, 927, 1041, 1087, 1242
FspI	TGCGCA	1 cut(s)	1672
GlaI	GCGC	1 cut(s)	1672
GluI	GCNGC	9 cut(s)	96, 714, 756, 768, 777, 927, 1041, 1087, 1242
GsaI	CCCAGC	1 cut(s)	1388
GsuI	CTGGAG	1 cut(s)	560
HaeIII	GGCC	6 cut(s)	393, 1163, 1373, 1540, 1627, 1696
HapII	CCGG	3 cut(s)	1317, 1454, 1788
HgaI	GACGC	2 cut(s)	1019, 1692
HhaI	GCGC	1 cut(s)	1673
Hin1II	CATG	7 cut(s)	525, 601, 615, 763, 1108, 1771, 1905
Hin6I	GCGC	1 cut(s)	1671
HinP1I	GCGC	1 cut(s)	1671
HindIII	AAGCTT	1 cut(s)	1171
HinfI	GANTC	6 cut(s)	131, 297, 305, 800, 1405, 1555
HpaII	CCGG	3 cut(s)	1317, 1454, 1788
HphI	GGTGA	2 cut(s)	1550, 1760
Hpy166II	GTNNAC	1 cut(s)	1498
Hpy188III	TCNNGA	8 cut(s)	707, 998, 1034, 1304, 1776, 1855, 1892, 1902
Hpy8I	GTNNAC	1 cut(s)	1498
Hpy99I	CGWCG	1 cut(s)	1568
HpyAV	CCTTC	6 cut(s)	276, 634, 658, 959, 1044, 1576
HpyCH4III	ACNGT	4 cut(s)	43, 356, 1059, 1184
Hsp92II	CATG	7 cut(s)	525, 601, 615, 763, 1108, 1771, 1905
HspAI	GCGC	1 cut(s)	1671
Ksp22I	TGATCA	3 cut(s)	385, 1000, 1822
Kzo9I	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
LmnI	GCTCC	5 cut(s)	422, 454, 649, 949, 1121
Lsp1109I	GCAGC	9 cut(s)	82, 700, 763, 767, 779, 938, 1052, 1073, 1253
LweI	GCATC	3 cut(s)	763, 1027, 1309
MaeIII	GTNAC	5 cut(s)	218, 314, 1053, 1304, 1402
MalI	GATC	9 cut(s)	109, 244, 387, 1002, 1355, 1701, 1824, 1845, 1900
MboI	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
MboII	GAAGA	7 cut(s)	63, 510, 683, 1253, 1646, 1763, 1866
MfeI	CAATTG	1 cut(s)	717
MflI	RGATCY	2 cut(s)	107, 1699
MhlI	GDGCHC	3 cut(s)	28, 817, 939
MlsI	TGGCCA	2 cut(s)	1163, 1373
MluCI	AATT	9 cut(s)	469, 658, 717, 786, 957, 1236, 1589, 1795, 1808
MluNI	TGGCCA	2 cut(s)	1163, 1373
MlyI	GAGTC	3 cut(s)	140, 1399, 1549
MmeI	TCCRAC	2 cut(s)	444, 777
Mox20I	TGGCCA	2 cut(s)	1163, 1373
MroXI	GAANNNNTTC	1 cut(s)	85
MscI	TGGCCA	2 cut(s)	1163, 1373
MseI	TTAA	2 cut(s)	17, 1643
MslI	CAYNNNNRTG	2 cut(s)	520, 1666
Msp20I	TGGCCA	2 cut(s)	1163, 1373
MspA1I	CMGCKG	5 cut(s)	770, 1086, 1244, 1388, 1430
MspI	CCGG	3 cut(s)	1317, 1454, 1788
MspR9I	CCNGG	3 cut(s)	539, 1317, 1454
MunI	CAATTG	1 cut(s)	717
Mva1269I	GAATGC	3 cut(s)	154, 1089, 1479
MvaI	CCWGG	1 cut(s)	539
NciI	CCSGG	2 cut(s)	1317, 1454
NcoI	CCATGG	1 cut(s)	759
NdeII	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
NheI	GCTAGC	2 cut(s)	1648, 1657
NlaIII	CATG	7 cut(s)	525, 601, 615, 763, 1108, 1771, 1905
NlaIV	GGNNCC	4 cut(s)	27, 464, 1123, 1608
NmeAIII	GCCGAG	1 cut(s)	419
NmuCI	GTSAC	4 cut(s)	314, 1053, 1304, 1402
NsbI	TGCGCA	1 cut(s)	1672
NspI	RCATGY	2 cut(s)	601, 615
NspV	TTCGAA	1 cut(s)	1234
PagI	TCATGA	1 cut(s)	1901
PciI	ACATGT	1 cut(s)	597
PctI	GAATGC	3 cut(s)	154, 1089, 1479
PdmI	GAANNNNTTC	1 cut(s)	85
PfeI	GAWTC	3 cut(s)	297, 305, 800
PinAI	ACCGGT	1 cut(s)	1787
PkrI	GCNGC	9 cut(s)	97, 715, 757, 769, 778, 928, 1042, 1088, 1243
PleI	GAGTC	3 cut(s)	139, 1399, 1549
PpsI	GAGTC	3 cut(s)	139, 1399, 1549
PpuMI	RGGWCCY	1 cut(s)	463
PscI	ACATGT	1 cut(s)	597
PsiI	TTATAA	1 cut(s)	329
Psp5II	RGGWCCY	1 cut(s)	463
Psp6I	CCWGG	1 cut(s)	537
PspFI	CCCAGC	1 cut(s)	1384
PspGI	CCWGG	1 cut(s)	537
PspN4I	GGNNCC	4 cut(s)	27, 464, 1123, 1608
PspPI	GGNCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
PspPPI	RGGWCCY	1 cut(s)	463
PstNI	CAGNNNCTG	3 cut(s)	308, 728, 1414
PsuI	RGATCY	2 cut(s)	107, 1699
PvuII	CAGCTG	5 cut(s)	770, 1086, 1244, 1388, 1430
RsaI	GTAC	6 cut(s)	602, 1412, 1435, 1460, 1716, 1786
RsaNI	GTAC	6 cut(s)	601, 1411, 1434, 1459, 1715, 1785
RseI	CAYNNNNRTG	2 cut(s)	520, 1666
SaqAI	TTAA	2 cut(s)	17, 1643
SatI	GCNGC	9 cut(s)	96, 714, 756, 768, 777, 927, 1041, 1087, 1242
Sau3AI	GATC	9 cut(s)	107, 242, 385, 1000, 1353, 1699, 1822, 1843, 1898
Sau96I	GGNCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
SchI	GAGTC	3 cut(s)	140, 1399, 1549
ScrFI	CCNGG	3 cut(s)	539, 1317, 1454
SduI	GDGCHC	3 cut(s)	28, 817, 939
SfaNI	GCATC	3 cut(s)	763, 1027, 1309
SfcI	CTRYAG	1 cut(s)	444
SfuI	TTCGAA	1 cut(s)	1234
SinI	GGWCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
SmiMI	CAYNNNNRTG	2 cut(s)	520, 1666
SmlI	CTYRAG	4 cut(s)	705, 1044, 1310, 1853
SmoI	CTYRAG	4 cut(s)	705, 1044, 1310, 1853
SpeI	ACTAGT	1 cut(s)	1378
Sse9I	AATT	9 cut(s)	469, 658, 717, 786, 957, 1236, 1589, 1795, 1808
SsiI	CCGC	1 cut(s)	403
StyD4I	CCNGG	3 cut(s)	537, 1315, 1452
StyI	CCWWGG	4 cut(s)	452, 759, 1293, 1503
TaaI	ACNGT	4 cut(s)	43, 356, 1059, 1184
TaqI	TCGA	4 cut(s)	488, 1093, 1234, 1566
TasI	AATT	9 cut(s)	469, 658, 717, 786, 957, 1236, 1589, 1795, 1808
TatI	WGTACW	2 cut(s)	600, 1714
TfiI	GAWTC	3 cut(s)	297, 305, 800
Tru1I	TTAA	2 cut(s)	17, 1643
Tru9I	TTAA	2 cut(s)	17, 1643
TscAI	CASTG	2 cut(s)	16, 1363
TseFI	GTSAC	4 cut(s)	314, 1053, 1304, 1402
TseI	GCWGC	9 cut(s)	95, 713, 755, 767, 776, 926, 1040, 1086, 1241
Tsp45I	GTSAC	4 cut(s)	314, 1053, 1304, 1402
TspDTI	ATGAA	7 cut(s)	312, 351, 491, 510, 842, 1167, 1775
TspRI	CASTG	2 cut(s)	16, 1363
VpaK11BI	GGWCC	6 cut(s)	463, 977, 1180, 1333, 1606, 1790
XapI	RAATTY	1 cut(s)	1589
XceI	RCATGY	2 cut(s)	601, 615
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1215
XmaJI	CCTAGG	1 cut(s)	452
XmiI	GTMKAC	1 cut(s)	1497
XmnI	GAANNNNTTC	1 cut(s)	85

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.