Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0007573

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG454400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGTGGTATAACAAAGGAGGTAATGCGGTGAAGACGAAAGAAGGAGGTGGAGGAGGAGGAAATGGGTTGGTAGCGGTCGCCATAGACAAGGACAAAGGGAGCCAAAATGCATTGAGGTGGGCTGCTGAATCTATTCTCTCCAGGGGCCAAACTGTTGTTCTAATTCATGTTATTCACCGGCAAAACGCAACAAATTCATTGGCTGGAGCCAATGCCATTATCTATGATTCAAACAACCCATCTAGCTCACCACACAAACAAAAGCTTGAAAAGATGACCAAAGATCTGTTCCTCACATTCCACTGCTATTGTACTCGAAAGGATATACAATGCCTTGATGTCATACTTGAAGATACAGATATTGGAAAAGCATTAACAGAGTATGTTTCTTATGCTGCAATTGAGACTCTGGTTCTTGGAGCTCCGTCAAAGCATGGTTTTATAAGATTCAAGTCATCAGGTATGTCAAGCAGTGTCTTAAAAGGGGCACCAGATTTCTGCACGGTATATGTCATCTCCAAAGGGAAGGCCTCTTCACAGCGAAATGCTTCTCGTGCTGCCCCATATAGATCTCCACTACTTTCCCACATTGAGTCCCTAAATAAGCAGAATGCTTCTAAAGTATCTGAAACACCTAAACACAACATATACTTGAAAGCAGCCAAGCCATCGTTCAAGCCTCGTAACTTGCCAGATGACCCATTCAGATCGCCATTTGCTAGAGGAGGAGGAGGTTTTACTAAAGGAAGGATGAGTGGAGGATTCTCAGAATCTGAAAGTGACATATCATTTATAAGCTCAGACAGAGCAAGCACAGACCGTGCTTCATCTGTAATGTATGAGTATATTGATCAAGGCCGAGGAGGGCGGTTATCTACCAGCTCCGACCACAGCTTTGGTTCAATCCCTATAGCACCTAGGTTCGGGGACCTCAATTCTATGAATGATTTTTCGATGGTGTCTGACACCAGCCTAACATCATCTTCATGGTCATCACAAAACCTGGAGGAAGTTGAAGCTGAGATGAGGAGGCTAAAGCTAGAGCTGAAGCAAACAATGGACATGTACAGCACAGCATGTAGAGAAGCACTTACAGCTAAACAGAAGGAAATGGAGCTGAACAATTTGAAGGCTGAAGAGGAACAAAAGCTAGAGGAGGCACGACTGGCTCAAGAAGCTGCAATTGCAGTCGCTGAGAAAGAAAAAGCTAGGTGCAGGGCAGCCATGGAAGCAGCTGATGCTGCTAAGAGAATTGCAGAGTTGGAATCACAAAAACGAGCACATACAGAAATGAAAGCCCTCAGGGAAGCAGAGGAAATGAGCAAGATATTGAATAATCTAGCCAACTCTGATACCAAATACAGGAGATATAGCATTGATGAGATAGAAGCAGCAACAGAGCACTTTGCTCCAAGTCGAAAAATTGGGGAAGGAGGTTATGGTCCTGTCTATAAGTGCTATCTTGATCACACACCAGTTGCAGTCAAGGTCTTGCGTCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGATTGACATTCTCAGCTGCATTCGACATCCCAACATGGTGCTACTTCTAGGAGCCTGCCCCGAGTATGGCATTTTAGTCTATGAATATATGGCCAATGGAAGCTTAGAGGACCGTCTCAAAAGGAAAGGGAACAGCCCACCTCTATCTTGGCAACTCAGGTTTCGAATTGCAGCTGAGATTGCCACAGGTCTTCTCTTTCTCCACCAGACCAAGCCAGAACCATTGGTGCATCGTGACCTCAAGCCCGGAAACATTTTACTGGACCACAACTTTGTAAGTAAGATCGGTGATGTTGGGTTGGCCAGACTAGTCCCAGCTGTTGCTGAAAATGTGACTCAGTACCTGATGACATCAACAGCTGGTACATTCTGCTATATAGACCCGGAGTACCAACAGACAGGAATGCTTGGTGTGAAATCTGATGTCTACTCCTTAGGCGTTATGCTCTTGCAAATGATAACATCAAGACCACCAATGGGATTGACTCACCTCGTCGAAAGGGCTATTGAGCAGGACAAATTTGTTGAGGTTTTGGACCCTGATGTGCTTGATTGGCCTGTTGAAGAAGCCTTAAAGCTAGCAAAGCTAGCACTCCAATGCGCAGAACTCAGACGCAAAGACAGGCCAGATATATGCAATGTTGTACTGCCAGAGCTAAGTAAGCTGAGAGAACTTGGTGAAGAAAATATGAACATCATGTTATCAGGAGGCAGTACTGGTCCTAATTCCACCATTCAATTCAATGTTTCTGATCAACAGGAAGTAATGAGTGATCCACAGCTCAAGAGCCAGTCAAGCACATCTTCACAGACAGAAAATCAAGAGGGATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

789

Amino Acids

86.98

Weight (kDa)

6.51

Isoelectric Point (pI)

50.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	24 - 164	1.2e-08	Universal stress protein family
Pkinase	PF00069	472 - 726	6.9e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	472 - 726	5.7e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16760 AT1G16760 AT1G78940 AT1G78940 AT1G78940 AT3G20200 AT3G20200 AT3G20200 AT3G20200
fragaria_vesca	FvH4_6g36560
malus_domestica	MD09G1167400.v1.1 MD17G1161000.v1.1
prunus_persica	Prupe.3G025400_v2.0.a1 Prupe.3G025400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0149031
rosa_laevigata	RLG00000020364
rosa_multiflora	Rmu_sc0007360.1_g000003
rosa_roxburghii	Rroxscaffold_2G00098520
rosa_rugosa	Rorug02G0408600 Rorug02G0408700
rosa_samantha	Rh2BG480900 Rh2CG454400 Rh2DG489700
rosa_wichuraiana	Rw2G038130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	443, 794
Acc16I	TGCGCA	1 cut(s)	2137
AccB1I	GGYRCC	1 cut(s)	487
AccI	GTMKAC	1 cut(s)	1962
AciI	CCGC	3 cut(s)	26, 74, 868
AclWI	GGATC	1 cut(s)	2303
AcoI	YGGCCR	2 cut(s)	1626, 1836
AcsI	RAATTY	2 cut(s)	193, 2054
AcuI	CTGAAG	2 cut(s)	1067, 1155
AfaI	GTAC	7 cut(s)	313, 1067, 1877, 1900, 1925, 2181, 2251
AfiI	CCNNNNNNNGG	4 cut(s)	923, 1362, 1601, 2012
AflIII	ACRYGT	1 cut(s)	1062
AhlI	ACTAGT	1 cut(s)	1843
AjnI	CCWGG	2 cut(s)	140, 1002
AjuI	GAANNNNNNNTTGG	6 cut(s)	141, 173, 272, 304, 656, 688
Alw21I	GWGCWC	3 cut(s)	424, 1282, 1404
Alw26I	GTCTC	2 cut(s)	398, 1655
AlwI	GGATC	1 cut(s)	2303
AlwNI	CAGNNNCTG	3 cut(s)	773, 1193, 1879
Ama87I	CYCGRG	1 cut(s)	1595
AoxI	GGCC	7 cut(s)	145, 528, 856, 1626, 1836, 2090, 2159
ApoI	RAATTY	2 cut(s)	193, 2054
ArsI	GACNNNNNNTTYG	4 cut(s)	878, 910, 1790, 1822
Asp700I	GAANNNNTTC	2 cut(s)	132, 547
AspA2I	CCTAGG	1 cut(s)	917
AspLEI	GCGC	1 cut(s)	2138
AspS9I	GGNCC	7 cut(s)	145, 928, 1442, 1645, 1798, 2071, 2255
AsuC2I	CCSGG	2 cut(s)	1782, 1919
AsuHPI	GGTGA	6 cut(s)	40, 167, 240, 1835, 2015, 2225
AsuII	TTCGAA	1 cut(s)	1699
AsuNHI	GCTAGC	2 cut(s)	2113, 2122
AvaI	CYCGRG	1 cut(s)	1595
AvaII	GGWCC	6 cut(s)	928, 1442, 1645, 1798, 2071, 2255
AvrII	CCTAGG	1 cut(s)	917
AxyI	CCTNAGG	2 cut(s)	1301, 1969
BaeGI	GKGCMC	1 cut(s)	490
BalI	TGGCCA	2 cut(s)	1628, 1838
BanI	GGYRCC	1 cut(s)	487
BanII	GRGCYC	1 cut(s)	424
BauI	CACGAG	1 cut(s)	552
BbsI	GAAGAC	2 cut(s)	38, 1718
Bbv12I	GWGCWC	3 cut(s)	424, 1282, 1404
BccI	CCATC	3 cut(s)	247, 676, 949
BciT130I	CCWGG	2 cut(s)	142, 1004
BclI	TGATCA	3 cut(s)	850, 1465, 2287
BcnI	CCSGG	2 cut(s)	1782, 1919
BcoDI	GTCTC	2 cut(s)	398, 1655
BcuI	ACTAGT	1 cut(s)	1843
BfmI	CTRYAG	1 cut(s)	909
BglII	AGATCT	2 cut(s)	283, 569
BlnI	CCTAGG	1 cut(s)	917
BmcAI	AGTACT	1 cut(s)	2251
Bme1390I	CCNGG	4 cut(s)	142, 1004, 1782, 1919
Bme18I	GGWCC	6 cut(s)	928, 1442, 1645, 1798, 2071, 2255
BmeT110I	CYCGRG	1 cut(s)	1595
BmgT120I	GGNCC	7 cut(s)	145, 928, 1442, 1645, 1798, 2071, 2255
BmiI	GGNNCC	7 cut(s)	101, 146, 208, 489, 929, 1588, 2073
BmrFI	CCNGG	4 cut(s)	142, 1004, 1782, 1919
BmsI	GCATC	3 cut(s)	1228, 1492, 1774
BmtI	GCTAGC	2 cut(s)	2117, 2126
BpiI	GAAGAC	2 cut(s)	38, 1718
BpmI	CTGGAG	3 cut(s)	124, 225, 1025
Bpu14I	TTCGAA	1 cut(s)	1699
BpuEI	CTTGAG	4 cut(s)	1155, 1494, 1760, 2303
BpuMI	CCSGG	2 cut(s)	1782, 1919
BsaJI	CCNNGG	4 cut(s)	141, 859, 917, 1224
Bsc4I	CCNNNNNNNGG	4 cut(s)	923, 1362, 1601, 2012
Bse118I	RCCGGY	1 cut(s)	177
Bse1I	ACTGG	5 cut(s)	1170, 1475, 1800, 2257, 2326
Bse21I	CCTNAGG	2 cut(s)	1301, 1969
Bse3DI	GCAATG	1 cut(s)	2179
BseBI	CCWGG	2 cut(s)	142, 1004
BseDI	CCNNGG	4 cut(s)	141, 859, 917, 1224
BseGI	GGATG	2 cut(s)	756, 1561
BseLI	CCNNNNNNNGG	4 cut(s)	923, 1362, 1601, 2012
BseMI	GCAATG	1 cut(s)	2179
BseNI	ACTGG	5 cut(s)	1170, 1475, 1800, 2257, 2326
BseRI	GAGGAG	8 cut(s)	66, 69, 738, 741, 744, 876, 1042, 1169
BseSI	GKGCMC	1 cut(s)	490
BseYI	CCCAGC	1 cut(s)	1849
BsgI	GTGCAG	2 cut(s)	484, 1234
Bsh1285I	CGRYCG	1 cut(s)	78
BshFI	GGCC	7 cut(s)	147, 530, 858, 1628, 1838, 2092, 2161
BshNI	GGYRCC	1 cut(s)	487
BsiEI	CGRYCG	1 cut(s)	78
BsiHKAI	GWGCWC	3 cut(s)	424, 1282, 1404
BsiHKCI	CYCGRG	1 cut(s)	1595
BsiSI	CCGG	3 cut(s)	178, 1782, 1919
BslFI	GGGAC	3 cut(s)	580, 941, 1832
BslI	CCNNNNNNNGG	4 cut(s)	923, 1362, 1601, 2012
BsmAI	GTCTC	2 cut(s)	398, 1655
BsmBI	CGTCTC	1 cut(s)	1655
BsmFI	GGGAC	3 cut(s)	580, 941, 1832
BsmI	GAATGC	3 cut(s)	616, 1554, 1944
BsnI	GGCC	7 cut(s)	147, 530, 858, 1628, 1838, 2092, 2161
BsoBI	CYCGRG	1 cut(s)	1595
Bsp119I	TTCGAA	1 cut(s)	1699
Bsp1286I	GDGCHC	4 cut(s)	424, 490, 1282, 1404
Bsp1407I	TGTACA	1 cut(s)	1065
Bsp143I	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
Bsp19I	CCATGG	1 cut(s)	1224
BspACI	CCGC	3 cut(s)	26, 74, 868
BspANI	GGCC	7 cut(s)	147, 530, 858, 1628, 1838, 2092, 2161
BspHI	TCATGA	1 cut(s)	2366
BspLI	GGNNCC	7 cut(s)	101, 146, 208, 489, 929, 1588, 2073
BspOI	GCTAGC	2 cut(s)	2117, 2126
BspPI	GGATC	1 cut(s)	2303
BspT104I	TTCGAA	1 cut(s)	1699
BspT107I	GGYRCC	1 cut(s)	487
BsrDI	GCAATG	1 cut(s)	2179
BsrFI	RCCGGY	1 cut(s)	177
BsrGI	TGTACA	1 cut(s)	1065
BsrI	ACTGG	5 cut(s)	1170, 1475, 1800, 2257, 2326
BssAI	RCCGGY	1 cut(s)	177
BssECI	CCNNGG	4 cut(s)	141, 859, 917, 1224
BssMI	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	2 cut(s)	917, 1224
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	2 cut(s)	142, 1004
Bst4CI	ACNGT	5 cut(s)	154, 505, 821, 1524, 1649
Bst6I	CTCTTC	2 cut(s)	538, 1131
BstAPI	GCANNNNNTGC	1 cut(s)	1238
BstAUI	TGTACA	1 cut(s)	1065
BstBI	TTCGAA	1 cut(s)	1699
BstC8I	GCNNGC	4 cut(s)	811, 1591, 2115, 2124
BstDSI	CCRYGG	1 cut(s)	1224
BstF5I	GGATG	2 cut(s)	756, 1561
BstHHI	GCGC	1 cut(s)	2138
BstKTI	GATC	9 cut(s)	286, 572, 710, 853, 1468, 1821, 2290, 2311, 2366
BstMAI	GTCTC	2 cut(s)	398, 1655
BstMBI	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
BstMCI	CGRYCG	1 cut(s)	78
BstNI	CCWGG	2 cut(s)	142, 1004
BstNSI	RCATGY	2 cut(s)	1066, 1080
BstSCI	CCNGG	4 cut(s)	140, 1002, 1780, 1917
BstSFI	CTRYAG	1 cut(s)	909
BstSLI	GKGCMC	1 cut(s)	490
BstV2I	GAAGAC	2 cut(s)	38, 1718
BstX2I	RGATCY	2 cut(s)	283, 569
BstXI	CCANNNNNNTGG	1 cut(s)	896
BstYI	RGATCY	2 cut(s)	283, 569
Bsu36I	CCTNAGG	2 cut(s)	1301, 1969
BsuRI	GGCC	7 cut(s)	147, 530, 858, 1628, 1838, 2092, 2161
BtgI	CCRYGG	1 cut(s)	1224
BtsCI	GGATG	2 cut(s)	756, 1561
BtsI	GCAGTG	2 cut(s)	301, 478
BtsIMutI	CAGTG	2 cut(s)	301, 478
Cac8I	GCNNGC	4 cut(s)	811, 1591, 2115, 2124
CaiI	CAGNNNCTG	3 cut(s)	773, 1193, 1879
CciI	TCATGA	1 cut(s)	2366
CfoI	GCGC	1 cut(s)	2138
Cfr10I	RCCGGY	1 cut(s)	177
Cfr13I	GGNCC	7 cut(s)	145, 928, 1442, 1645, 1798, 2071, 2255
CseI	GACGC	2 cut(s)	1484, 2157
Csp6I	GTAC	7 cut(s)	312, 1066, 1876, 1899, 1924, 2180, 2250
CspCI	CAANNNNNGTGG	2 cut(s)	290, 325
CviAII	CATG	9 cut(s)	167, 434, 987, 1063, 1077, 1225, 1570, 2233, 2367
CviQI	GTAC	7 cut(s)	312, 1066, 1876, 1899, 1924, 2180, 2250
DpnI	GATC	9 cut(s)	285, 571, 709, 852, 1467, 1820, 2289, 2310, 2365
DpnII	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
EaeI	YGGCCR	2 cut(s)	1626, 1836
Eam1104I	CTCTTC	2 cut(s)	538, 1131
EarI	CTCTTC	2 cut(s)	538, 1131
Ecl136II	GAGCTC	1 cut(s)	422
Eco130I	CCWWGG	2 cut(s)	917, 1224
Eco147I	AGGCCT	1 cut(s)	530
Eco24I	GRGCYC	1 cut(s)	424
Eco47I	GGWCC	6 cut(s)	928, 1442, 1645, 1798, 2071, 2255
Eco53kI	GAGCTC	1 cut(s)	422
Eco57I	CTGAAG	2 cut(s)	1067, 1155
Eco81I	CCTNAGG	2 cut(s)	1301, 1969
Eco88I	CYCGRG	1 cut(s)	1595
EcoICRI	GAGCTC	1 cut(s)	422
EcoO109I	RGGNCCY	1 cut(s)	928
EcoRII	CCWGG	2 cut(s)	140, 1002
EcoT14I	CCWWGG	2 cut(s)	917, 1224
EcoT22I	ATGCAT	1 cut(s)	112
EcoT38I	GRGCYC	1 cut(s)	424
ErhI	CCWWGG	2 cut(s)	917, 1224
Esp3I	CGTCTC	1 cut(s)	1655
FaeI	CATG	9 cut(s)	170, 437, 990, 1066, 1080, 1228, 1573, 2236, 2370
FalI	AAGNNNNNCTT	2 cut(s)	2323, 2355
FaqI	GGGAC	3 cut(s)	580, 941, 1832
FatI	CATG	9 cut(s)	166, 433, 986, 1062, 1076, 1224, 1569, 2232, 2366
FbaI	TGATCA	3 cut(s)	850, 1465, 2287
FblI	GTMKAC	1 cut(s)	1962
FokI	GGATG	2 cut(s)	763, 1548
FriOI	GRGCYC	1 cut(s)	424
FspI	TGCGCA	1 cut(s)	2137
GlaI	GCGC	1 cut(s)	2137
GsaI	CCCAGC	1 cut(s)	1853
GsuI	CTGGAG	3 cut(s)	124, 225, 1025
HaeIII	GGCC	7 cut(s)	147, 530, 858, 1628, 1838, 2092, 2161
HapII	CCGG	3 cut(s)	178, 1782, 1919
HgaI	GACGC	2 cut(s)	1484, 2157
HhaI	GCGC	1 cut(s)	2138
Hin1II	CATG	9 cut(s)	170, 437, 990, 1066, 1080, 1228, 1573, 2236, 2370
Hin6I	GCGC	1 cut(s)	2136
HinP1I	GCGC	1 cut(s)	2136
HindIII	AAGCTT	2 cut(s)	263, 1636
HpaII	CCGG	3 cut(s)	178, 1782, 1919
HphI	GGTGA	6 cut(s)	40, 167, 240, 1835, 2015, 2225
Hpy166II	GTNNAC	1 cut(s)	1963
Hpy188III	TCNNGA	9 cut(s)	1172, 1463, 1499, 1769, 2001, 2241, 2320, 2357, 2367
Hpy8I	GTNNAC	1 cut(s)	1963
Hpy99I	CGWCG	1 cut(s)	2033
HpyAV	CCTTC	7 cut(s)	35, 520, 741, 1099, 1123, 1424, 1509
HpyCH4III	ACNGT	5 cut(s)	154, 505, 821, 1524, 1649
Hsp92II	CATG	9 cut(s)	170, 437, 990, 1066, 1080, 1228, 1573, 2236, 2370
HspAI	GCGC	1 cut(s)	2136
Ksp22I	TGATCA	3 cut(s)	850, 1465, 2287
Kzo9I	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
LmnI	GCTCC	8 cut(s)	99, 206, 419, 427, 887, 1114, 1414, 1586
LweI	GCATC	3 cut(s)	1228, 1492, 1774
MaeIII	GTNAC	5 cut(s)	683, 779, 1518, 1769, 1867
MalI	GATC	9 cut(s)	285, 571, 709, 852, 1467, 1820, 2289, 2310, 2365
MboI	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
MboII	GAAGA	9 cut(s)	43, 362, 525, 975, 1148, 1718, 2111, 2228, 2331
MfeI	CAATTG	2 cut(s)	399, 1182
MflI	RGATCY	2 cut(s)	283, 569
MhlI	GDGCHC	4 cut(s)	424, 490, 1282, 1404
MlsI	TGGCCA	2 cut(s)	1628, 1838
MluNI	TGGCCA	2 cut(s)	1628, 1838
MlyI	GAGTC	4 cut(s)	400, 602, 1864, 2014
MmeI	TCCRAC	2 cut(s)	909, 1242
Mox20I	TGGCCA	2 cut(s)	1628, 1838
Mph1103I	ATGCAT	1 cut(s)	112
MroXI	GAANNNNTTC	2 cut(s)	132, 547
MscI	TGGCCA	2 cut(s)	1628, 1838
MseI	TTAA	3 cut(s)	374, 479, 2108
MslI	CAYNNNNRTG	3 cut(s)	115, 985, 2131
Msp20I	TGGCCA	2 cut(s)	1628, 1838
MspA1I	CMGCKG	5 cut(s)	1235, 1551, 1709, 1853, 1895
MspI	CCGG	3 cut(s)	178, 1782, 1919
MspR9I	CCNGG	4 cut(s)	142, 1004, 1782, 1919
MunI	CAATTG	2 cut(s)	399, 1182
Mva1269I	GAATGC	3 cut(s)	616, 1554, 1944
MvaI	CCWGG	2 cut(s)	142, 1004
NciI	CCSGG	2 cut(s)	1782, 1919
NcoI	CCATGG	1 cut(s)	1224
NdeII	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
NheI	GCTAGC	2 cut(s)	2113, 2122
NlaIII	CATG	9 cut(s)	170, 437, 990, 1066, 1080, 1228, 1573, 2236, 2370
NlaIV	GGNNCC	7 cut(s)	101, 146, 208, 489, 929, 1588, 2073
NmeAIII	GCCGAG	1 cut(s)	884
NmuCI	GTSAC	4 cut(s)	779, 1518, 1769, 1867
NsbI	TGCGCA	1 cut(s)	2137
NsiI	ATGCAT	1 cut(s)	112
NspI	RCATGY	2 cut(s)	1066, 1080
NspV	TTCGAA	1 cut(s)	1699
PagI	TCATGA	1 cut(s)	2366
PceI	AGGCCT	1 cut(s)	530
PciI	ACATGT	1 cut(s)	1062
PctI	GAATGC	3 cut(s)	616, 1554, 1944
PdmI	GAANNNNTTC	2 cut(s)	132, 547
PfeI	GAWTC	6 cut(s)	128, 227, 447, 762, 770, 1265
PleI	GAGTC	4 cut(s)	400, 601, 1864, 2014
PpsI	GAGTC	4 cut(s)	400, 601, 1864, 2014
PpuMI	RGGWCCY	1 cut(s)	928
PscI	ACATGT	1 cut(s)	1062
PsiI	TTATAA	2 cut(s)	443, 794
Psp124BI	GAGCTC	1 cut(s)	424
Psp5II	RGGWCCY	1 cut(s)	928
Psp6I	CCWGG	2 cut(s)	140, 1002
PspFI	CCCAGC	1 cut(s)	1849
PspGI	CCWGG	2 cut(s)	140, 1002
PspN4I	GGNNCC	7 cut(s)	101, 146, 208, 489, 929, 1588, 2073
PspPI	GGNCC	7 cut(s)	145, 928, 1442, 1645, 1798, 2071, 2255
PspPPI	RGGWCCY	1 cut(s)	928
PstNI	CAGNNNCTG	3 cut(s)	773, 1193, 1879
PsuI	RGATCY	2 cut(s)	283, 569
PvuII	CAGCTG	5 cut(s)	1235, 1551, 1709, 1853, 1895
RsaI	GTAC	7 cut(s)	313, 1067, 1877, 1900, 1925, 2181, 2251
RsaNI	GTAC	7 cut(s)	312, 1066, 1876, 1899, 1924, 2180, 2250
RseI	CAYNNNNRTG	3 cut(s)	115, 985, 2131
SacI	GAGCTC	1 cut(s)	424
SaqAI	TTAA	3 cut(s)	374, 479, 2108
Sau3AI	GATC	9 cut(s)	283, 569, 707, 850, 1465, 1818, 2287, 2308, 2363
Sau96I	GGNCC	7 cut(s)	145, 928, 1442, 1645, 1798, 2071, 2255
ScaI	AGTACT	1 cut(s)	2251
SchI	GAGTC	4 cut(s)	400, 602, 1864, 2014
ScrFI	CCNGG	4 cut(s)	142, 1004, 1782, 1919
SduI	GDGCHC	4 cut(s)	424, 490, 1282, 1404
SfaNI	GCATC	3 cut(s)	1228, 1492, 1774
SfcI	CTRYAG	1 cut(s)	909
SfuI	TTCGAA	1 cut(s)	1699
SinI	GGWCC	6 cut(s)	928, 1442, 1645, 1798, 2071, 2255
SmiMI	CAYNNNNRTG	3 cut(s)	115, 985, 2131
SmlI	CTYRAG	4 cut(s)	1170, 1509, 1775, 2318
SmoI	CTYRAG	4 cut(s)	1170, 1509, 1775, 2318
SpeI	ACTAGT	1 cut(s)	1843
SseBI	AGGCCT	1 cut(s)	530
SsiI	CCGC	3 cut(s)	26, 74, 868
SstI	GAGCTC	1 cut(s)	424
StuI	AGGCCT	1 cut(s)	530
StyD4I	CCNGG	4 cut(s)	140, 1002, 1780, 1917
StyI	CCWWGG	2 cut(s)	917, 1224
TaaI	ACNGT	5 cut(s)	154, 505, 821, 1524, 1649
TaqI	TCGA	6 cut(s)	316, 953, 1417, 1558, 1699, 2031
TatI	WGTACW	4 cut(s)	311, 1065, 2179, 2249
TfiI	GAWTC	6 cut(s)	128, 227, 447, 762, 770, 1265
Tru1I	TTAA	3 cut(s)	374, 479, 2108
Tru9I	TTAA	3 cut(s)	374, 479, 2108
TscAI	CASTG	2 cut(s)	308, 478
TseFI	GTSAC	4 cut(s)	779, 1518, 1769, 1867
Tsp45I	GTSAC	4 cut(s)	779, 1518, 1769, 1867
TspDTI	ATGAA	8 cut(s)	155, 186, 816, 956, 975, 1307, 1632, 2240
TspGWI	ACGGA	1 cut(s)	414
TspRI	CASTG	2 cut(s)	308, 478
VpaK11BI	GGWCC	6 cut(s)	928, 1442, 1645, 1798, 2071, 2255
XapI	RAATTY	2 cut(s)	193, 2054
XceI	RCATGY	2 cut(s)	1066, 1080
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1680
XmaJI	CCTAGG	1 cut(s)	917
XmiI	GTMKAC	1 cut(s)	1962
XmnI	GAANNNNTTC	2 cut(s)	132, 547
ZrmI	AGTACT	1 cut(s)	2251
Zsp2I	ATGCAT	1 cut(s)	112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.