Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0004348

Physical Location & Seq

Genomic Coordinates Reverse (-)

31694184 .. 31715752

Gene Structure 21569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1247300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGACAAGCCTCTGCTCAACGGTGAAGGCAGCGGCGTCCCGCGACGCGGAGATCCACCCATCGCCTTCAAACGCCGCTCCGATGCCATCTCCTTCGGCACTCCTTACCAGAAAGCTGCCGCACTCGTCGATTTGGCGGAAGATGGCGTTGGCTTACCCGAGCAGATACTGGATCAATCAAGCTTTCAGAGTGCCGCAAAGTTCTACTTCCTTTTCTTTCGATTCAGCTTCCTTTGGGCTCTCCTCTATTTCGCCCTCATCATACTCAATTTCCTCGAGAAACCTCTGTGGTGCGCTAGGTATACTGGCGCTGTCTATACATGTAGGGACAGAGACTACTTCTATCTTGGCCAATTGCCGTACTTGAATACTCTGGAGGCTCTTATTTTTGAGGGCATAACACTCATTGTACTCGTAGTGCACATTTTCTTTCCAATTTCGTATGAAGGGTTCCATCTCTATTGGAAAAATCCTCTTACCCTATTCAAGGTCACGTGCCTACTGATTTTGGTTGCTGATATGCTGGTTTATGCTCTCTATTTGTCTTCAGTGGCCTTTGATTCCCTTCCTTTCAGGATTGCACCATACATCAGAGTTATCTTTTTCATCTTGAATTTCAGGGAATTGCGGTCGTGCATGCTCATCGTGGCTGGAATGCTTGGCACGTACATAAACGTCGTGGCTCTAGGGCTCTTATTTCTTCTGTTTGCCAGTTGGTTGGCCTATGTCATGTTTGAAGATACCCAGCAGGGGAGAATAGTATTTACTTCGTATGGTGTCACATTGTATCAGATGTTTATTTTATTCACCACATCAAACAATCCAGATGTCTGGATACCTGCCTACAAGGCTTCACGTTGGTTTTCCTTGTTTTTCGTTATCTATGTGCTGTTGGGAGTTTACTTTGTCACGAACTTGATTCTTGCTGTTGTGTACGATAGCTTCAAAAATCAGCTTGTGAAACAAGTTTCTGGGATGGACCAGACAAGGAAAACTATACTAAAGAAAGCCTTCAATTTATTAGACAAGGATAATGTAGGATATCTCAATAAGGATCAGTGTATACAACTATTTGAGGAACTAAATAATTACAGGACTTTGCCAAACATAACAAGAGAAGAATTTGAGCTGATATTTGAAGAGCTGGATGACAGTGGAGACTTCAAGATAAACTTAGAAGAGTTCTTTGATCTTTGCAATGCCATTGCTCTAAGATTCCAGAAGGAGGATTCTCCCTCTTTGCTTGAAAAGTTCCCTTCAATCTACCATTCATTGTTCTCTGAAAAGTTGAAGACCTTCGTCAGGAGTCCCAAATTTGGATACATAATATCCTTCATGCTCATAGTCAATCTGGCTGCTGTTATTGTCGAAACAACGCTTGATATAGAAAACAGTACTGCTCAAGAGGTGTGGCAAGTGGCAGAGTTTGTTTTTGGGTGGGTATATGTACTGGAAATGGCTCTGAAAGTCTATTCTTTTGGATTTGAGAACTATTGGAGGGATGGTCAAAATCGCTTTGATTTTCTGGTGACATGGATAATAGTTATTGGGGAAACTATAACTTTTGTGGCTCCTGAAGGACAAACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTATAATTGCAAGAATGTTAAGATTGATTAGGCTCCTGATGTATGTCCAGCGCTACCGGGCATTTGTTGCTACCTTTTTAACTCTCATACCGAGTTTGATGCCGTACCTTGGAACCATATTTTGTGTCATGTGTATCTATTGTACACTCGGTGTACAGGTATTTGGTGGAATTGTTAATGATGGAAATGCCTTGCTGGAAGGATCTGAGCTTTATGAGAATGACTATTTACTTTTCAACTTCAATGACTACCCCAATGGGATGGTAACACTTTTCAATTTGCTAGTCATGGGAAACTGGCATTTGTGGATGGAGGGTTATCAGGAAATAACAGGAACTTGGTGGAGCGTTGTATATTTTGTCAGCTTTTATCTTGTAACTGTTGTTCTGCTATTGAACTTGGTCATGGCTTTTGTCCTGGAGGCGTTCTTTGCTGAAATGGATCTTGAGTTATCAGAAAAATTTGAGGAGGGGGAAGGAGCAAAAGATCGACGTCGATCTTTGGGCTCCAAAACTCAGAGCCAGAGAATTGATGTTCTTCTTCACCATATGCTGAGTTCAGAGCTAACTCAGACACAACCCTTCAATACAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001508 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005245 GO:0005261 GO:0005262 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008324 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010119 GO:0010565 GO:0010817 GO:0012505 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019216 GO:0019217 GO:0019222 GO:0019722 GO:0019932 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031090 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0034220 GO:0035556 GO:0042304 GO:0042391 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046885 GO:0046890 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0051899 GO:0055085 GO:0062012 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0080090 GO:0080140 GO:0080141 GO:0086010 GO:0090351 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_7 Ion_trans

Protein Analysis

738

Amino Acids

85.34

Weight (kDa)

5.0

Isoelectric Point (pI)

32.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	129 - 318	5.8e-15	Ion transport protein
EF-hand_7	PF13499	334 - 398	6e-09	EF-hand domain pair
Ion_trans	PF00520	438 - 683	1.9e-40	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03560
fragaria_vesca	FvH4_6g26210 FvH4_6g26210 FvH4_6g26210 FvH4_6g26210
malus_domestica	MD09G1247300.v1.1 MD17G1240200.v1.1
prunus_persica	Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1
pyrus_communis	pycom09g16460 pycom17g24350
rosa_chinensis	RchiOBHm_Chr2g0126531 RchiOBHm_Chr2g0126551
rosa_laevigata	RLG00000018910 RLG00000018911
rosa_multiflora	Rmu_sc0002369.1_g000031 Rmu_sc0002369.1_g000036 Rmu_sc0007463.1_g000007
rosa_roxburghii	Rroxscaffold_2G00117090 Rroxscaffold_2G00117120
rosa_rugosa	Rorug02G0263600
rosa_samantha	Rh2AG320600 Rh2AG320700 Rh2BG329000 Rh2BG329100 Rh2CG308800 Rh2CG308900 Rh2DG348300 Rh2DG348400
rosa_wichuraiana	Rw2G025970 Rw2G025980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1622
AatII	GACGTC	1 cut(s)	2113
Acc36I	ACCTGC	1 cut(s)	847
AccBSI	CCGCTC	1 cut(s)	78
AccI	GTMKAC	2 cut(s)	302, 1063
AccII	CGCG	2 cut(s)	43, 48
AciI	CCGC	8 cut(s)	33, 41, 48, 76, 120, 137, 195, 628
AclWI	GGATC	5 cut(s)	47, 180, 1062, 1828, 2067
AcoI	YGGCCR	1 cut(s)	349
AcsI	RAATTY	4 cut(s)	613, 1121, 1313, 2078
AcuI	CTGAAG	2 cut(s)	531, 1596
AcvI	CACGTG	1 cut(s)	495
AcyI	GRCGYC	2 cut(s)	36, 2110
AdeI	CACNNNGTG	1 cut(s)	1769
AfaI	GTAC	9 cut(s)	362, 411, 668, 935, 1396, 1449, 1724, 1762, 1773
AfeI	AGCGCT	1 cut(s)	1670
AfiI	CCNNNNNNNGG	7 cut(s)	47, 487, 750, 1225, 1302, 1316, 1727
AflIII	ACRYGT	1 cut(s)	320
AjnI	CCWGG	1 cut(s)	2034
AjuI	GAANNNNNNNTTGG	2 cut(s)	132, 164
Alw21I	GWGCWC	1 cut(s)	423
Alw26I	GTCTC	2 cut(s)	327, 1152
Alw44I	GTGCAC	1 cut(s)	419
AlwI	GGATC	5 cut(s)	47, 180, 1062, 1828, 2067
AlwNI	CAGNNNCTG	1 cut(s)	169
Ama87I	CYCGRG	2 cut(s)	158, 275
Aor51HI	AGCGCT	1 cut(s)	1670
AoxI	GGCC	3 cut(s)	349, 552, 720
ApaLI	GTGCAC	1 cut(s)	419
ApeKI	GCWGC	3 cut(s)	30, 116, 1355
ApoI	RAATTY	4 cut(s)	613, 1121, 1313, 2078
Asp700I	GAANNNNTTC	3 cut(s)	1010, 1295, 1608
AspLEI	GCGC	3 cut(s)	296, 311, 1671
AspS9I	GGNCC	1 cut(s)	979
AsuC2I	CCSGG	1 cut(s)	1676
AsuHPI	GGTGA	4 cut(s)	35, 799, 1540, 2153
AvaI	CYCGRG	2 cut(s)	158, 275
AvaII	GGWCC	1 cut(s)	979
BaeGI	GKGCMC	1 cut(s)	423
BalI	TGGCCA	1 cut(s)	351
BanII	GRGCYC	3 cut(s)	241, 693, 2126
BarI	GAAGNNNNNNTAC	2 cut(s)	926, 958
BbrPI	CACGTG	1 cut(s)	495
BbsI	GAAGAC	2 cut(s)	537, 1298
Bbv12I	GWGCWC	1 cut(s)	423
BbvI	GCAGC	3 cut(s)	42, 103, 1342
BccI	CCATC	9 cut(s)	68, 95, 137, 462, 970, 1496, 1793, 1873, 1921
BceAI	ACGGC	2 cut(s)	343, 1705
BcgI	CGANNNNNNTGC	4 cut(s)	625, 659, 1699, 1733
BciT130I	CCWGG	1 cut(s)	2036
BciVI	GTATCC	2 cut(s)	828, 1313
BcnI	CCSGG	1 cut(s)	1676
BcoDI	GTCTC	2 cut(s)	327, 1152
BfaI	CTAG	3 cut(s)	297, 686, 1901
BfoI	RGCGCY	2 cut(s)	312, 1672
BfuAI	ACCTGC	1 cut(s)	847
BfuI	GTATCC	2 cut(s)	828, 1313
BglI	GCCNNNNNGGC	1 cut(s)	848
BisI	GCNGC	7 cut(s)	31, 34, 76, 117, 120, 195, 1356
BlsI	GCNGC	7 cut(s)	32, 35, 77, 118, 121, 196, 1357
BmcAI	AGTACT	1 cut(s)	1396
Bme1390I	CCNGG	2 cut(s)	1676, 2036
Bme18I	GGWCC	1 cut(s)	979
BmeT110I	CYCGRG	2 cut(s)	158, 275
BmgT120I	GGNCC	1 cut(s)	979
BmiI	GGNNCC	5 cut(s)	452, 1572, 1652, 1732, 2125
BmrFI	CCNGG	2 cut(s)	1676, 2036
BmsI	GCATC	2 cut(s)	73, 1707
BoxI	GACNNNNGTC	1 cut(s)	1298
BpiI	GAAGAC	2 cut(s)	537, 1298
BpmI	CTGGAG	2 cut(s)	395, 2057
BpuEI	CTTGAG	2 cut(s)	1386, 2084
BpuMI	CCSGG	1 cut(s)	1676
BsaAI	YACGTR	2 cut(s)	495, 666
BsaHI	GRCGYC	2 cut(s)	36, 2110
BsaJI	CCNNGG	1 cut(s)	1726
BsaXI	ACNNNNNCTCC	2 cut(s)	1489, 1519
Bsc4I	CCNNNNNNNGG	7 cut(s)	47, 487, 750, 1225, 1302, 1316, 1727
Bse1I	ACTGG	5 cut(s)	174, 310, 711, 1455, 1919
Bse3DI	GCAATG	2 cut(s)	1203, 1204
BseBI	CCWGG	1 cut(s)	2036
BseDI	CCNNGG	1 cut(s)	1726
BseGI	GGATG	5 cut(s)	981, 1153, 1507, 1884, 1932
BseLI	CCNNNNNNNGG	7 cut(s)	47, 487, 750, 1225, 1302, 1316, 1727
BseMI	GCAATG	2 cut(s)	1203, 1204
BseMII	CTCAG	4 cut(s)	1815, 2147, 2162, 2201
BseNI	ACTGG	5 cut(s)	174, 310, 711, 1455, 1919
BseRI	GAGGAG	2 cut(s)	233, 2099
BseSI	GKGCMC	1 cut(s)	423
BseXI	GCAGC	3 cut(s)	42, 103, 1342
BseYI	CCCAGC	1 cut(s)	744
Bsh1236I	CGCG	2 cut(s)	43, 48
Bsh1285I	CGRYCG	1 cut(s)	632
BshFI	GGCC	3 cut(s)	351, 554, 722
BsiEI	CGRYCG	1 cut(s)	632
BsiHKAI	GWGCWC	1 cut(s)	423
BsiHKCI	CYCGRG	2 cut(s)	158, 275
BsiSI	CCGG	1 cut(s)	1675
BslFI	GGGAC	3 cut(s)	23, 341, 1293
BslI	CCNNNNNNNGG	7 cut(s)	47, 487, 750, 1225, 1302, 1316, 1727
BsmAI	GTCTC	2 cut(s)	327, 1152
BsmFI	GGGAC	3 cut(s)	23, 341, 1293
BsmI	GAATGC	1 cut(s)	660
BsnI	GGCC	3 cut(s)	351, 554, 722
BsoBI	CYCGRG	2 cut(s)	158, 275
Bsp1286I	GDGCHC	4 cut(s)	241, 423, 693, 2126
Bsp1407I	TGTACA	2 cut(s)	1760, 1771
Bsp143I	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
BspACI	CCGC	8 cut(s)	33, 41, 48, 76, 120, 137, 195, 628
BspANI	GGCC	3 cut(s)	351, 554, 722
BspCNI	CTCAG	4 cut(s)	1816, 2146, 2163, 2200
BspFNI	CGCG	2 cut(s)	43, 48
BspLI	GGNNCC	5 cut(s)	452, 1572, 1652, 1732, 2125
BspMI	ACCTGC	1 cut(s)	847
BspPI	GGATC	5 cut(s)	47, 180, 1062, 1828, 2067
BspQI	GCTCTTC	1 cut(s)	1134
BsrBI	CCGCTC	1 cut(s)	78
BsrDI	GCAATG	2 cut(s)	1203, 1204
BsrGI	TGTACA	2 cut(s)	1760, 1771
BsrI	ACTGG	5 cut(s)	174, 310, 711, 1455, 1919
BssECI	CCNNGG	1 cut(s)	1726
BssMI	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
BssNAI	GTATAC	2 cut(s)	303, 1064
BssNI	GRCGYC	2 cut(s)	36, 2110
BssT1I	CCWWGG	1 cut(s)	1726
Bst1107I	GTATAC	2 cut(s)	303, 1064
Bst2UI	CCWGG	1 cut(s)	2036
Bst4CI	ACNGT	4 cut(s)	23, 1154, 1394, 1999
Bst6I	CTCTTC	2 cut(s)	1134, 1173
BstACI	GRCGYC	2 cut(s)	36, 2110
BstAPI	GCANNNNNTGC	1 cut(s)	1685
BstAUI	TGTACA	2 cut(s)	1760, 1771
BstBAI	YACGTR	2 cut(s)	495, 666
BstC8I	GCNNGC	1 cut(s)	638
BstDEI	CTNAG	6 cut(s)	1174, 1211, 1824, 2133, 2171, 2187
BstENI	CCTNNNNNAGG	2 cut(s)	485, 1300
BstF5I	GGATG	5 cut(s)	981, 1153, 1507, 1884, 1932
BstFNI	CGCG	2 cut(s)	43, 48
BstH2I	RGCGCY	2 cut(s)	312, 1672
BstHHI	GCGC	3 cut(s)	296, 311, 1671
BstKTI	GATC	8 cut(s)	55, 175, 1057, 1192, 1823, 2062, 2107, 2117
BstMAI	GTCTC	2 cut(s)	327, 1152
BstMBI	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
BstMCI	CGRYCG	1 cut(s)	632
BstMWI	GCNNNNNNNGC	3 cut(s)	848, 1685, 2048
BstNI	CCWGG	1 cut(s)	2036
BstNSI	RCATGY	2 cut(s)	324, 640
BstPAI	GACNNNNGTC	1 cut(s)	1298
BstSCI	CCNGG	2 cut(s)	1674, 2034
BstSLI	GKGCMC	1 cut(s)	423
BstUI	CGCG	2 cut(s)	43, 48
BstV1I	GCAGC	3 cut(s)	42, 103, 1342
BstV2I	GAAGAC	2 cut(s)	537, 1298
BstX2I	RGATCY	3 cut(s)	52, 1820, 2059
BstXI	CCANNNNNNTGG	3 cut(s)	718, 831, 1879
BstYI	RGATCY	3 cut(s)	52, 1820, 2059
BstZ17I	GTATAC	2 cut(s)	303, 1064
BsuI	GTATCC	2 cut(s)	828, 1313
BsuRI	GGCC	3 cut(s)	351, 554, 722
BtgZI	GCGATG	1 cut(s)	46
BtsCI	GGATG	5 cut(s)	981, 1153, 1507, 1884, 1932
BtsIMutI	CAGTG	3 cut(s)	555, 1064, 1159
BveI	ACCTGC	1 cut(s)	847
Cac8I	GCNNGC	1 cut(s)	638
CaiI	CAGNNNCTG	1 cut(s)	169
CfoI	GCGC	3 cut(s)	296, 311, 1671
Cfr13I	GGNCC	1 cut(s)	979
CseI	GACGC	2 cut(s)	25, 54
Csp6I	GTAC	9 cut(s)	361, 410, 667, 934, 1395, 1448, 1723, 1761, 1772
CspCI	CAANNNNNGTGG	2 cut(s)	1391, 1426
CviAII	CATG	8 cut(s)	321, 637, 730, 1336, 1533, 1747, 1906, 2023
CviQI	GTAC	9 cut(s)	361, 410, 667, 934, 1395, 1448, 1723, 1761, 1772
DdeI	CTNAG	6 cut(s)	1174, 1211, 1824, 2133, 2171, 2187
DpnI	GATC	8 cut(s)	54, 174, 1056, 1191, 1822, 2061, 2106, 2116
DpnII	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
DraIII	CACNNNGTG	1 cut(s)	1769
EaeI	YGGCCR	1 cut(s)	349
Eam1104I	CTCTTC	2 cut(s)	1134, 1173
EarI	CTCTTC	2 cut(s)	1134, 1173
EciI	GGCGGA	1 cut(s)	152
Eco130I	CCWWGG	1 cut(s)	1726
Eco24I	GRGCYC	3 cut(s)	241, 693, 2126
Eco32I	GATATC	1 cut(s)	1043
Eco47I	GGWCC	1 cut(s)	979
Eco47III	AGCGCT	1 cut(s)	1670
Eco57I	CTGAAG	2 cut(s)	531, 1596
Eco72I	CACGTG	1 cut(s)	495
Eco88I	CYCGRG	2 cut(s)	158, 275
EcoNI	CCTNNNNNAGG	2 cut(s)	485, 1300
EcoRII	CCWGG	1 cut(s)	2034
EcoRV	GATATC	1 cut(s)	1043
EcoT14I	CCWWGG	1 cut(s)	1726
EcoT38I	GRGCYC	3 cut(s)	241, 693, 2126
ErhI	CCWWGG	1 cut(s)	1726
FaeI	CATG	8 cut(s)	324, 640, 733, 1339, 1536, 1750, 1909, 2026
FalI	AAGNNNNNCTT	6 cut(s)	191, 223, 995, 1027, 1157, 1189
FaqI	GGGAC	3 cut(s)	23, 341, 1293
FatI	CATG	8 cut(s)	320, 636, 729, 1335, 1532, 1746, 1905, 2022
FauI	CCCGC	1 cut(s)	48
FauNDI	CATATG	1 cut(s)	2166
FblI	GTMKAC	2 cut(s)	302, 1063
Fnu4HI	GCNGC	7 cut(s)	31, 34, 76, 117, 120, 195, 1356
FokI	GGATG	5 cut(s)	988, 1160, 1514, 1891, 1939
FriOI	GRGCYC	3 cut(s)	241, 693, 2126
Fsp4HI	GCNGC	7 cut(s)	31, 34, 76, 117, 120, 195, 1356
FspBI	CTAG	3 cut(s)	297, 686, 1901
GlaI	GCGC	3 cut(s)	295, 310, 1670
GluI	GCNGC	7 cut(s)	31, 34, 76, 117, 120, 195, 1356
GsaI	CCCAGC	1 cut(s)	748
GsuI	CTGGAG	2 cut(s)	395, 2057
HaeII	RGCGCY	2 cut(s)	312, 1672
HaeIII	GGCC	3 cut(s)	351, 554, 722
HapII	CCGG	1 cut(s)	1675
HgaI	GACGC	2 cut(s)	25, 54
HhaI	GCGC	3 cut(s)	296, 311, 1671
Hin1I	GRCGYC	2 cut(s)	36, 2110
Hin1II	CATG	8 cut(s)	324, 640, 733, 1339, 1536, 1750, 1909, 2026
Hin6I	GCGC	3 cut(s)	294, 309, 1669
HinP1I	GCGC	3 cut(s)	294, 309, 1669
HindIII	AAGCTT	1 cut(s)	181
HinfI	GANTC	7 cut(s)	222, 560, 919, 1215, 1229, 1306, 1609
HpaII	CCGG	1 cut(s)	1675
HphI	GGTGA	4 cut(s)	35, 799, 1540, 2153
Hpy166II	GTNNAC	7 cut(s)	303, 421, 901, 934, 1064, 1763, 1772
Hpy8I	GTNNAC	7 cut(s)	303, 421, 901, 934, 1064, 1763, 1772
Hpy99I	CGWCG	5 cut(s)	48, 131, 680, 2112, 2115
HpyCH4III	ACNGT	4 cut(s)	23, 1154, 1394, 1999
HpyCH4IV	ACGT	5 cut(s)	494, 665, 675, 856, 2110
HpyCH4V	TGCA	5 cut(s)	421, 581, 636, 1197, 1628
HpyF10VI	GCNNNNNNNGC	3 cut(s)	848, 1685, 2048
HpyF3I	CTNAG	6 cut(s)	1174, 1211, 1824, 2133, 2171, 2187
HpySE526I	ACGT	5 cut(s)	494, 665, 675, 856, 2110
Hsp92I	GRCGYC	2 cut(s)	36, 2110
Hsp92II	CATG	8 cut(s)	324, 640, 733, 1339, 1536, 1750, 1909, 2026
HspAI	GCGC	3 cut(s)	294, 309, 1669
Kzo9I	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
LguI	GCTCTTC	1 cut(s)	1134
LmnI	GCTCC	6 cut(s)	83, 1576, 1656, 1962, 2096, 2129
Lsp1109I	GCAGC	3 cut(s)	42, 103, 1342
LweI	GCATC	2 cut(s)	73, 1707
MaeI	CTAG	3 cut(s)	297, 686, 1901
MaeII	ACGT	5 cut(s)	494, 665, 675, 856, 2110
MaeIII	GTNAC	6 cut(s)	490, 778, 907, 1528, 1882, 1993
MalI	GATC	8 cut(s)	54, 174, 1056, 1191, 1822, 2061, 2106, 2116
MbiI	CCGCTC	1 cut(s)	78
MboI	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
MfeI	CAATTG	1 cut(s)	353
MflI	RGATCY	3 cut(s)	52, 1820, 2059
MhlI	GDGCHC	4 cut(s)	241, 423, 693, 2126
MlsI	TGGCCA	1 cut(s)	351
MluNI	TGGCCA	1 cut(s)	351
MlyI	GAGTC	1 cut(s)	1315
Mox20I	TGGCCA	1 cut(s)	351
MroXI	GAANNNNTTC	3 cut(s)	1010, 1295, 1608
MscI	TGGCCA	1 cut(s)	351
MseI	TTAA	3 cut(s)	1637, 1697, 1794
Msp20I	TGGCCA	1 cut(s)	351
MspA1I	CMGCKG	1 cut(s)	33
MspI	CCGG	1 cut(s)	1675
MspR9I	CCNGG	2 cut(s)	1676, 2036
MunI	CAATTG	1 cut(s)	353
Mva1269I	GAATGC	1 cut(s)	660
MvaI	CCWGG	1 cut(s)	2036
MvnI	CGCG	2 cut(s)	43, 48
MwoI	GCNNNNNNNGC	3 cut(s)	848, 1685, 2048
NciI	CCSGG	1 cut(s)	1676
NdeI	CATATG	1 cut(s)	2166
NdeII	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
NlaIII	CATG	8 cut(s)	324, 640, 733, 1339, 1536, 1750, 1909, 2026
NlaIV	GGNNCC	5 cut(s)	452, 1572, 1652, 1732, 2125
NmuCI	GTSAC	4 cut(s)	490, 778, 907, 1528
NspI	RCATGY	2 cut(s)	324, 640
PaeI	GCATGC	1 cut(s)	640
PaeR7I	CTCGAG	1 cut(s)	275
PciI	ACATGT	1 cut(s)	320
PciSI	GCTCTTC	1 cut(s)	1134
PctI	GAATGC	1 cut(s)	660
PdmI	GAANNNNTTC	3 cut(s)	1010, 1295, 1608
PfeI	GAWTC	6 cut(s)	222, 560, 919, 1215, 1229, 1609
PfoI	TCCNGGA	1 cut(s)	2034
PkrI	GCNGC	7 cut(s)	32, 35, 77, 118, 121, 196, 1357
PleI	GAGTC	1 cut(s)	1314
PmaCI	CACGTG	1 cut(s)	495
PmlI	CACGTG	1 cut(s)	495
PpsI	GAGTC	1 cut(s)	1314
Ppu21I	YACGTR	2 cut(s)	495, 666
PscI	ACATGT	1 cut(s)	320
PshAI	GACNNNNGTC	1 cut(s)	1298
PsiI	TTATAA	1 cut(s)	1622
Psp6I	CCWGG	1 cut(s)	2034
PspCI	CACGTG	1 cut(s)	495
PspFI	CCCAGC	1 cut(s)	744
PspGI	CCWGG	1 cut(s)	2034
PspN4I	GGNNCC	5 cut(s)	452, 1572, 1652, 1732, 2125
PspPI	GGNCC	1 cut(s)	979
PsrI	GAACNNNNNNTAC	4 cut(s)	434, 466, 1986, 2018
PstNI	CAGNNNCTG	1 cut(s)	169
PsuI	RGATCY	3 cut(s)	52, 1820, 2059
RsaI	GTAC	9 cut(s)	362, 411, 668, 935, 1396, 1449, 1724, 1762, 1773
RsaNI	GTAC	9 cut(s)	361, 410, 667, 934, 1395, 1448, 1723, 1761, 1772
SapI	GCTCTTC	1 cut(s)	1134
SaqAI	TTAA	3 cut(s)	1637, 1697, 1794
SatI	GCNGC	7 cut(s)	31, 34, 76, 117, 120, 195, 1356
Sau3AI	GATC	8 cut(s)	52, 172, 1054, 1189, 1820, 2059, 2104, 2114
Sau96I	GGNCC	1 cut(s)	979
ScaI	AGTACT	1 cut(s)	1396
SchI	GAGTC	1 cut(s)	1315
ScrFI	CCNGG	2 cut(s)	1676, 2036
SduI	GDGCHC	4 cut(s)	241, 423, 693, 2126
SfaNI	GCATC	2 cut(s)	73, 1707
Sfr274I	CTCGAG	1 cut(s)	275
SinI	GGWCC	1 cut(s)	979
SlaI	CTCGAG	1 cut(s)	275
SmlI	CTYRAG	3 cut(s)	275, 1401, 2063
SmoI	CTYRAG	3 cut(s)	275, 1401, 2063
SphI	GCATGC	1 cut(s)	640
SsiI	CCGC	8 cut(s)	33, 41, 48, 76, 120, 137, 195, 628
SspMI	CTAG	3 cut(s)	297, 686, 1901
StyD4I	CCNGG	2 cut(s)	1674, 2034
StyI	CCWWGG	1 cut(s)	1726
TaaI	ACNGT	4 cut(s)	23, 1154, 1394, 1999
TaiI	ACGT	5 cut(s)	497, 668, 678, 859, 2113
TaqI	TCGA	6 cut(s)	129, 220, 276, 1368, 2107, 2113
TatI	WGTACW	5 cut(s)	409, 1394, 1447, 1760, 1771
TauI	GCSGC	4 cut(s)	36, 78, 122, 197
TfiI	GAWTC	6 cut(s)	222, 560, 919, 1215, 1229, 1609
Tru1I	TTAA	3 cut(s)	1637, 1697, 1794
Tru9I	TTAA	3 cut(s)	1637, 1697, 1794
TscAI	CASTG	3 cut(s)	555, 1064, 1159
TseFI	GTSAC	4 cut(s)	490, 778, 907, 1528
TseI	GCWGC	3 cut(s)	30, 116, 1355
Tsp45I	GTSAC	4 cut(s)	490, 778, 907, 1528
TspDTI	ATGAA	4 cut(s)	459, 595, 1260, 1324
TspRI	CASTG	3 cut(s)	555, 1064, 1159
VneI	GTGCAC	1 cut(s)	419
VpaK11BI	GGWCC	1 cut(s)	979
XagI	CCTNNNNNAGG	2 cut(s)	485, 1300
XapI	RAATTY	4 cut(s)	613, 1121, 1313, 2078
XceI	RCATGY	2 cut(s)	324, 640
XhoI	CTCGAG	1 cut(s)	275
XmiI	GTMKAC	2 cut(s)	302, 1063
XmnI	GAANNNNTTC	3 cut(s)	1010, 1295, 1608
XspI	CTAG	3 cut(s)	297, 686, 1901
ZraI	GACGTC	1 cut(s)	2111
ZrmI	AGTACT	1 cut(s)	1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.