Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0004348

Physical Location & Seq

Genomic Coordinates Forward (+)

45957434 .. 45973017

Gene Structure 15584 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG320600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGAGAATCCATTGCTCACCGGAGAAAGCAGTACTCTCCGACGCGGCGGCGATTTGTCCAGGGCCTTCAAACGCCGCTCCGATGCCATCACATTCGGCTCTTCTTATCAGAAAGCAGCTGCTCTCGTCGACTTGGCGGAAGACGGCATTGGCTTACCTGAGCAGATACTTGATCTCTCATCTTTCCATAGCTCTGCAAAATACTACTTCCTTTATATGCGATTCAGCTTCCTCTGGGCCCTACTCTACTTCGCCCTCTTGATTCTCAATTTCCTTGAGAAACCTCTGTGGTGTGCCAGGTATACTGATTATACTTGCAGTGACAGGGATTACTACTACCTCGGCCAATTGCCCTACTTAACTCCTACGGAGTCCCTTATTTATGAGGGCATAACACTGATTGTACTCATGGTGCATACTTTCTTTCCAATTTCATATGTGGGGTTCCGTCTCTATTGGAAAAGTCCTCTTACTCAATTCAAGGTCGTATGCCTGTTGATTTTGGTTGCTGATTTGCTGGTTTATGTTCTCTATTTGTCTCCAGTAGCCTTTGATTCTCTCCCTTTCCGGGTTGCTCCATATGTCAGAGTCATCTTTTTCATCTTGAACTTTAGGGAATTACGATCATGCATGCTCATCTTGGCTGGAATGTTTGGCACATACTTGAACGTCTTGGCTTTAGGGCTTTTATTTCTTCTGTTTTCCAGTTGGCTGGCTTATGTCATATTTGAAGATACTGACCAGGGGACAACAGTATTTACTTCATATGGTACCACATTGTATCAGATGTTTGTTTTATTCACCACATCCAACAATCCAGATGTCTGGATACCTGCCTACAAGGCTTCACGTTGGTATTGCTTGTTTTTTGTTCTGTACGTGTTGCTAGGAGTCTATTTTGTCACAAATTTGATCCTTGCCGTCGTGTATGACAGCTTCAAAAGTCAGCTTGTAAAGCAAGTTTCTGAGATGGACCAGACGAGGAAAACTATACTGGAGAAAGCCTTTAATTTAATAGAACAAGATAACGCTGGATATATCAATAAGGACCAGTGCATACGTTTGTTTGAGGAACTAAACAAATACAGGACGTTGCCAAAAATATCAAGAGAAGAATTTGAGCTGATATTTGATGAGCTGGATGACAGTGGAGACATCAAGATTAACTTAGACGAATTCACTGACCTCTGTAACGCCATTGCCCTAAAATTCCAGAAGGAGGATACCCCATCTTGGTTTGAAAAGTTCCCTTCGTGTTACCATTCTCCCTTCTCAGAGAAGTTGAAGGCCTTTATTCGGAGCCCCAGATTTGGATACATAATATCCTTCATACTCATAATCAATCTATCTGCTGTTATCGTTGAAACTACGCTTGACATAGAAAACAATTCTGCTCAGAAGGTATGGCAATCGATGGAGTTTGTCCTTGGGTGGGTATATGTACTGGAAATGGCTCTGAAAGTCTATTCATTTGGATTTGAGAACTTTTGGAGGGATGGCCAAAATCGATTTGATTTTCTGGTCACATTGATAATAGCTATTGGAGAAACGCTAACTTTTGCTGCTCCAGAAGGACTAACTTTCCTTTCAAATGGAGAATGGATTCGCTACCTTCTCATTGCAAGGATGTTACGATTGATTAGGCTCCTGATGTATGTCCAGCGTTGCCGAGCCTTTATCGCCACATTCTTAACTCTTATTCCAAGTTTGATGCCATACCTTGGGACCATATTTTGTGTCATGTGCATATATTGTACGCTTGGTGTACAGATCTTCGGGGGGATTGTTAATGCTGGAAATGCCAATTTGGAAGCAACAGATCTTTATGACAACGACTATCTACTTTTCAACTTCAATGACTATCCAAATGGGATGGTGACACTTTTCAATTTACTAGTCATGGGAAACTGGCAAGCTTGGATGCAGAGTTATAAGGCTTTAACGGGAACTTCTTGGAGCCTTCTCTATTTTGTCAGTTTCTATCTTATAACCGTCTTACTTCTACTGAATTTGGTTGTGGCTTTTGTCCTGGAGGCTTTCTTTGCTGAAATGGAGCTCGAGTCTGCAGAAATTTGTGAAAAGAATGGGGAGGAGGTGGAAGGAGTAAAAGACCGACCTCGATCCGTAGGCTCAAAATCACGGAGCCAGAGAGTTGATGCTCTTCTTCATCATATGTTGAGTGCAGAGCTAAATGAAACGCAGTCCTCCAGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001508 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005245 GO:0005261 GO:0005262 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008324 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010119 GO:0010565 GO:0010817 GO:0012505 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019216 GO:0019217 GO:0019222 GO:0019722 GO:0019932 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031090 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0034220 GO:0035556 GO:0042304 GO:0042391 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046885 GO:0046890 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0051899 GO:0055085 GO:0062012 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0080090 GO:0080140 GO:0080141 GO:0086010 GO:0090351 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_7 Ion_trans

Protein Analysis

738

Amino Acids

85.08

Weight (kDa)

5.0

Isoelectric Point (pI)

35.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	130 - 316	6.3e-18	Ion transport protein
EF-hand_7	PF13499	332 - 396	5e-07	EF-hand domain pair
Ion_trans	PF00520	436 - 681	1.4e-39	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03560
fragaria_vesca	FvH4_6g26210 FvH4_6g26210 FvH4_6g26210 FvH4_6g26210
malus_domestica	MD09G1247300.v1.1 MD17G1240200.v1.1
prunus_persica	Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1
pyrus_communis	pycom09g16460 pycom17g24350
rosa_chinensis	RchiOBHm_Chr2g0126531 RchiOBHm_Chr2g0126551
rosa_laevigata	RLG00000018910 RLG00000018911
rosa_multiflora	Rmu_sc0002369.1_g000031 Rmu_sc0002369.1_g000036 Rmu_sc0007463.1_g000007
rosa_roxburghii	Rroxscaffold_2G00117090 Rroxscaffold_2G00117120
rosa_rugosa	Rorug02G0263600
rosa_samantha	Rh2AG320600 Rh2AG320700 Rh2BG329000 Rh2BG329100 Rh2CG308800 Rh2CG308900 Rh2DG348300 Rh2DG348400
rosa_wichuraiana	Rw2G025970 Rw2G025980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1932, 1988
Acc36I	ACCTGC	1 cut(s)	841
Acc65I	GGTACC	1 cut(s)	770
AccB1I	GGYRCC	1 cut(s)	770
AccB7I	CCANNNNNTGG	1 cut(s)	1721
AccBSI	CCGCTC	1 cut(s)	78
AccI	GTMKAC	2 cut(s)	129, 302
AccII	CGCG	1 cut(s)	45
AciI	CCGC	4 cut(s)	45, 48, 76, 137
AclWI	GGATC	2 cut(s)	907, 2115
AcoI	YGGCCR	2 cut(s)	343, 1498
AcsI	RAATTY	6 cut(s)	907, 1115, 1175, 1208, 2008, 2070
AfaI	GTAC	7 cut(s)	34, 405, 772, 878, 1443, 1756, 1767
AfiI	CCNNNNNNNGG	7 cut(s)	568, 1219, 1233, 1296, 1310, 1432, 1721
AflIII	ACRYGT	1 cut(s)	879
AhlI	ACTAGT	1 cut(s)	1894
AjnI	CCWGG	4 cut(s)	59, 296, 741, 2028
AjuI	GAANNNNNNNTTGG	2 cut(s)	132, 164
Alw21I	GWGCWC	1 cut(s)	2058
Alw26I	GTCTC	3 cut(s)	455, 543, 1146
AlwI	GGATC	2 cut(s)	907, 2115
Ama87I	CYCGRG	1 cut(s)	2057
AoxI	GGCC	5 cut(s)	63, 237, 343, 1287, 1498
ApaI	GGGCCC	1 cut(s)	241
ApeKI	GCWGC	3 cut(s)	116, 119, 1562
ApoI	RAATTY	6 cut(s)	907, 1115, 1175, 1208, 2008, 2070
Asp700I	GAANNNNTTC	1 cut(s)	1602
Asp718I	GGTACC	1 cut(s)	770
AspS9I	GGNCC	6 cut(s)	63, 237, 238, 973, 1048, 1725
AsuC2I	CCSGG	1 cut(s)	569
AsuHPI	GGTGA	3 cut(s)	10, 793, 1888
AvaI	CYCGRG	1 cut(s)	2057
AvaII	GGWCC	3 cut(s)	973, 1048, 1725
BaeGI	GKGCMC	1 cut(s)	241
BalI	TGGCCA	1 cut(s)	1500
BanI	GGYRCC	1 cut(s)	770
BanII	GRGCYC	3 cut(s)	241, 1304, 2058
BarI	GAAGNNNNNNTAC	2 cut(s)	920, 952
BbsI	GAAGAC	1 cut(s)	147
Bbv12I	GWGCWC	1 cut(s)	2058
BbvI	GCAGC	3 cut(s)	106, 128, 1549
BccI	CCATC	6 cut(s)	95, 964, 1237, 1408, 1490, 1867
BceAI	ACGGC	2 cut(s)	160, 905
BciT130I	CCWGG	4 cut(s)	61, 298, 743, 2030
BciVI	GTATCC	3 cut(s)	822, 1216, 1307
BcnI	CCSGG	1 cut(s)	569
BcoDI	GTCTC	3 cut(s)	455, 543, 1146
BcuI	ACTAGT	1 cut(s)	1894
BfaI	CTAG	2 cut(s)	887, 1895
BfmI	CTRYAG	1 cut(s)	2064
BfuAI	ACCTGC	1 cut(s)	841
BfuI	GTATCC	3 cut(s)	822, 1216, 1307
BglI	GCCNNNNNGGC	1 cut(s)	842
BglII	AGATCT	2 cut(s)	1770, 1819
BisI	GCNGC	6 cut(s)	46, 49, 76, 117, 120, 1563
BlsI	GCNGC	6 cut(s)	47, 50, 77, 118, 121, 1564
BmcAI	AGTACT	1 cut(s)	34
Bme1390I	CCNGG	5 cut(s)	61, 298, 569, 743, 2030
Bme18I	GGWCC	3 cut(s)	973, 1048, 1725
BmeT110I	CYCGRG	1 cut(s)	2057
BmgT120I	GGNCC	6 cut(s)	63, 237, 238, 973, 1048, 1725
BmiI	GGNNCC	8 cut(s)	239, 446, 772, 1301, 1646, 1726, 1958, 2144
BmrFI	CCNGG	5 cut(s)	61, 298, 569, 743, 2030
BmsI	GCATC	4 cut(s)	73, 1701, 1911, 2146
BpiI	GAAGAC	1 cut(s)	147
BpmI	CTGGAG	5 cut(s)	525, 1016, 1551, 2051, 2191
Bpu10I	CCTNAGC	1 cut(s)	159
BpuEI	CTTGAG	1 cut(s)	296
BpuMI	CCSGG	1 cut(s)	569
Bsa29I	ATCGAT	2 cut(s)	1412, 1507
BsaAI	YACGTR	1 cut(s)	880
BsaJI	CCNNGG	5 cut(s)	60, 340, 742, 1426, 1720
BsaWI	WCCGGW	1 cut(s)	20
BsaXI	ACNNNNNCTCC	2 cut(s)	2045, 2075
Bsc4I	CCNNNNNNNGG	7 cut(s)	568, 1219, 1233, 1296, 1310, 1432, 1721
Bse1I	ACTGG	7 cut(s)	542, 705, 999, 1051, 1449, 1913, 2208
Bse3DI	GCAATG	3 cut(s)	11, 1197, 1617
BseBI	CCWGG	4 cut(s)	61, 298, 743, 2030
BseCI	ATCGAT	2 cut(s)	1412, 1507
BseDI	CCNNGG	5 cut(s)	60, 340, 742, 1426, 1720
BseGI	GGATG	6 cut(s)	806, 1147, 1501, 1632, 1878, 1926
BseLI	CCNNNNNNNGG	7 cut(s)	568, 1219, 1233, 1296, 1310, 1432, 1721
BseMI	GCAATG	3 cut(s)	11, 1197, 1617
BseMII	CTCAG	4 cut(s)	150, 957, 1287, 1409
BseNI	ACTGG	7 cut(s)	542, 705, 999, 1051, 1449, 1913, 2208
BseRI	GAGGAG	1 cut(s)	2105
BseSI	GKGCMC	1 cut(s)	241
BseXI	GCAGC	3 cut(s)	106, 128, 1549
BsgI	GTGCAG	1 cut(s)	2202
Bsh1236I	CGCG	1 cut(s)	45
BshFI	GGCC	5 cut(s)	65, 239, 345, 1289, 1500
BshNI	GGYRCC	1 cut(s)	770
BshVI	ATCGAT	2 cut(s)	1412, 1507
BsiHKAI	GWGCWC	1 cut(s)	2058
BsiHKCI	CYCGRG	1 cut(s)	2057
BsiSI	CCGG	2 cut(s)	21, 568
BslFI	GGGAC	3 cut(s)	358, 760, 1738
BslI	CCNNNNNNNGG	7 cut(s)	568, 1219, 1233, 1296, 1310, 1432, 1721
BsmAI	GTCTC	3 cut(s)	455, 543, 1146
BsmBI	CGTCTC	1 cut(s)	455
BsmFI	GGGAC	3 cut(s)	358, 760, 1738
BsnI	GGCC	5 cut(s)	65, 239, 345, 1289, 1500
BsoBI	CYCGRG	1 cut(s)	2057
Bsp120I	GGGCCC	1 cut(s)	237
Bsp1286I	GDGCHC	3 cut(s)	241, 1304, 2058
Bsp1407I	TGTACA	1 cut(s)	1765
Bsp143I	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
BspACI	CCGC	4 cut(s)	45, 48, 76, 137
BspANI	GGCC	5 cut(s)	65, 239, 345, 1289, 1500
BspCNI	CTCAG	4 cut(s)	151, 958, 1286, 1408
BspDI	ATCGAT	2 cut(s)	1412, 1507
BspFNI	CGCG	1 cut(s)	45
BspLI	GGNNCC	8 cut(s)	239, 446, 772, 1301, 1646, 1726, 1958, 2144
BspMAI	CTGCAG	1 cut(s)	2068
BspMI	ACCTGC	1 cut(s)	841
BspPI	GGATC	2 cut(s)	907, 2115
BspQI	GCTCTTC	2 cut(s)	106, 2166
BspT107I	GGYRCC	1 cut(s)	770
BsrBI	CCGCTC	1 cut(s)	78
BsrDI	GCAATG	3 cut(s)	11, 1197, 1617
BsrGI	TGTACA	1 cut(s)	1765
BsrI	ACTGG	7 cut(s)	542, 705, 999, 1051, 1449, 1913, 2208
BssECI	CCNNGG	5 cut(s)	60, 340, 742, 1426, 1720
BssMI	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
BssNAI	GTATAC	1 cut(s)	303
BssT1I	CCWWGG	2 cut(s)	1426, 1720
Bst1107I	GTATAC	1 cut(s)	303
Bst2UI	CCWGG	4 cut(s)	61, 298, 743, 2030
Bst4CI	ACNGT	3 cut(s)	754, 1148, 1993
Bst6I	CTCTTC	2 cut(s)	106, 2166
BstAUI	TGTACA	1 cut(s)	1765
BstBAI	YACGTR	1 cut(s)	880
BstC8I	GCNNGC	3 cut(s)	632, 714, 1914
BstDEI	CTNAG	5 cut(s)	159, 966, 1168, 1273, 1395
BstF5I	GGATG	6 cut(s)	806, 1147, 1501, 1632, 1878, 1926
BstFNI	CGCG	1 cut(s)	45
BstKTI	GATC	6 cut(s)	175, 626, 915, 1773, 1822, 2123
BstMAI	GTCTC	3 cut(s)	455, 543, 1146
BstMBI	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
BstMWI	GCNNNNNNNGC	5 cut(s)	842, 955, 1679, 1799, 2042
BstNI	CCWGG	4 cut(s)	61, 298, 743, 2030
BstNSI	RCATGY	1 cut(s)	634
BstSCI	CCNGG	5 cut(s)	59, 296, 567, 741, 2028
BstSFI	CTRYAG	1 cut(s)	2064
BstSLI	GKGCMC	1 cut(s)	241
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	3 cut(s)	106, 128, 1549
BstV2I	GAAGAC	1 cut(s)	147
BstX2I	RGATCY	2 cut(s)	1770, 1819
BstXI	CCANNNNNNTGG	2 cut(s)	712, 825
BstYI	RGATCY	2 cut(s)	1770, 1819
BstZ17I	GTATAC	1 cut(s)	303
Bsu15I	ATCGAT	2 cut(s)	1412, 1507
BsuI	GTATCC	3 cut(s)	822, 1216, 1307
BsuRI	GGCC	5 cut(s)	65, 239, 345, 1289, 1500
BsuTUI	ATCGAT	2 cut(s)	1412, 1507
BtsCI	GGATG	6 cut(s)	806, 1147, 1501, 1632, 1878, 1926
BtsI	GCAGTG	1 cut(s)	325
BtsIMutI	CAGTG	6 cut(s)	325, 395, 1058, 1153, 1179, 2215
BveI	ACCTGC	1 cut(s)	841
Cac8I	GCNNGC	3 cut(s)	632, 714, 1914
Cfr13I	GGNCC	6 cut(s)	63, 237, 238, 973, 1048, 1725
ClaI	ATCGAT	2 cut(s)	1412, 1507
CseI	GACGC	1 cut(s)	51
Csp6I	GTAC	7 cut(s)	33, 404, 771, 877, 1442, 1755, 1766
CviAII	CATG	5 cut(s)	409, 627, 631, 1741, 1900
CviQI	GTAC	7 cut(s)	33, 404, 771, 877, 1442, 1755, 1766
DdeI	CTNAG	5 cut(s)	159, 966, 1168, 1273, 1395
DpnI	GATC	6 cut(s)	174, 625, 914, 1772, 1821, 2122
DpnII	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
EaeI	YGGCCR	2 cut(s)	343, 1498
Eam1104I	CTCTTC	2 cut(s)	106, 2166
EarI	CTCTTC	2 cut(s)	106, 2166
EciI	GGCGGA	1 cut(s)	152
Ecl136II	GAGCTC	1 cut(s)	2056
Eco130I	CCWWGG	2 cut(s)	1426, 1720
Eco147I	AGGCCT	1 cut(s)	1289
Eco24I	GRGCYC	3 cut(s)	241, 1304, 2058
Eco47I	GGWCC	3 cut(s)	973, 1048, 1725
Eco53kI	GAGCTC	1 cut(s)	2056
Eco88I	CYCGRG	1 cut(s)	2057
EcoICRI	GAGCTC	1 cut(s)	2056
EcoO109I	RGGNCCY	2 cut(s)	63, 238
EcoRI	GAATTC	1 cut(s)	1175
EcoRII	CCWGG	4 cut(s)	59, 296, 741, 2028
EcoT14I	CCWWGG	2 cut(s)	1426, 1720
EcoT22I	ATGCAT	1 cut(s)	632
EcoT38I	GRGCYC	3 cut(s)	241, 1304, 2058
ErhI	CCWWGG	2 cut(s)	1426, 1720
Esp3I	CGTCTC	1 cut(s)	455
FaeI	CATG	5 cut(s)	412, 630, 634, 1744, 1903
FalI	AAGNNNNNCTT	2 cut(s)	1151, 1183
FaqI	GGGAC	3 cut(s)	358, 760, 1738
FatI	CATG	5 cut(s)	408, 626, 630, 1740, 1899
FauNDI	CATATG	4 cut(s)	436, 580, 766, 2172
FblI	GTMKAC	2 cut(s)	129, 302
Fnu4HI	GCNGC	6 cut(s)	46, 49, 76, 117, 120, 1563
FokI	GGATG	6 cut(s)	793, 1154, 1508, 1639, 1885, 1933
FriOI	GRGCYC	3 cut(s)	241, 1304, 2058
Fsp4HI	GCNGC	6 cut(s)	46, 49, 76, 117, 120, 1563
FspBI	CTAG	2 cut(s)	887, 1895
GluI	GCNGC	6 cut(s)	46, 49, 76, 117, 120, 1563
GsuI	CTGGAG	5 cut(s)	525, 1016, 1551, 2051, 2191
HaeIII	GGCC	5 cut(s)	65, 239, 345, 1289, 1500
HapII	CCGG	2 cut(s)	21, 568
HgaI	GACGC	1 cut(s)	51
Hin1II	CATG	5 cut(s)	412, 630, 634, 1744, 1903
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HindIII	AAGCTT	1 cut(s)	1914
HinfI	GANTC	9 cut(s)	7, 222, 262, 371, 554, 588, 891, 1603, 2060
HpaII	CCGG	2 cut(s)	21, 568
HphI	GGTGA	3 cut(s)	10, 793, 1888
Hpy166II	GTNNAC	3 cut(s)	130, 303, 1766
Hpy188III	TCNNGA	9 cut(s)	259, 604, 818, 826, 1107, 1159, 1213, 1568, 1648
Hpy8I	GTNNAC	3 cut(s)	130, 303, 1766
Hpy99I	CGWCG	3 cut(s)	45, 131, 926
HpyCH4III	ACNGT	3 cut(s)	754, 1148, 1993
HpyCH4IV	ACGT	5 cut(s)	669, 850, 879, 1060, 1091
HpyF10VI	GCNNNNNNNGC	5 cut(s)	842, 955, 1679, 1799, 2042
HpyF3I	CTNAG	5 cut(s)	159, 966, 1168, 1273, 1395
HpySE526I	ACGT	5 cut(s)	669, 850, 879, 1060, 1091
Hsp92II	CATG	5 cut(s)	412, 630, 634, 1744, 1903
KpnI	GGTACC	1 cut(s)	774
Kzo9I	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
LguI	GCTCTTC	2 cut(s)	106, 2166
LmnI	GCTCC	8 cut(s)	83, 580, 1299, 1570, 1650, 1956, 2053, 2142
Lsp1109I	GCAGC	3 cut(s)	106, 128, 1549
LweI	GCATC	4 cut(s)	73, 1701, 1911, 2146
MaeI	CTAG	2 cut(s)	887, 1895
MaeII	ACGT	5 cut(s)	669, 850, 879, 1060, 1091
MaeIII	GTNAC	7 cut(s)	320, 901, 1190, 1256, 1522, 1629, 1876
MalI	GATC	6 cut(s)	174, 625, 914, 1772, 1821, 2122
MbiI	CCGCTC	1 cut(s)	78
MboI	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
MboII	GAAGA	8 cut(s)	93, 152, 686, 743, 1124, 1765, 2153, 2156
MfeI	CAATTG	1 cut(s)	347
MflI	RGATCY	2 cut(s)	1770, 1819
MhlI	GDGCHC	3 cut(s)	241, 1304, 2058
MlsI	TGGCCA	1 cut(s)	1500
MluNI	TGGCCA	1 cut(s)	1500
MlyI	GAGTC	4 cut(s)	380, 597, 900, 2069
MmeI	TCCRAC	2 cut(s)	64, 834
Mox20I	TGGCCA	1 cut(s)	1500
Mph1103I	ATGCAT	1 cut(s)	632
MroXI	GAANNNNTTC	1 cut(s)	1602
MscI	TGGCCA	1 cut(s)	1500
MseI	TTAA	7 cut(s)	359, 1008, 1013, 1164, 1691, 1788, 1940
Msp20I	TGGCCA	1 cut(s)	1500
MspA1I	CMGCKG	1 cut(s)	119
MspI	CCGG	2 cut(s)	21, 568
MspR9I	CCNGG	5 cut(s)	61, 298, 569, 743, 2030
MunI	CAATTG	1 cut(s)	347
MvaI	CCWGG	4 cut(s)	61, 298, 743, 2030
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	5 cut(s)	842, 955, 1679, 1799, 2042
NciI	CCSGG	1 cut(s)	569
NdeI	CATATG	4 cut(s)	436, 580, 766, 2172
NdeII	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
NlaIII	CATG	5 cut(s)	412, 630, 634, 1744, 1903
NlaIV	GGNNCC	8 cut(s)	239, 446, 772, 1301, 1646, 1726, 1958, 2144
NmeAIII	GCCGAG	2 cut(s)	321, 1694
NmuCI	GTSAC	4 cut(s)	320, 901, 1522, 1876
NsiI	ATGCAT	1 cut(s)	632
NspI	RCATGY	1 cut(s)	634
PaeI	GCATGC	1 cut(s)	634
PaeR7I	CTCGAG	1 cut(s)	2057
PceI	AGGCCT	1 cut(s)	1289
PciSI	GCTCTTC	2 cut(s)	106, 2166
PdmI	GAANNNNTTC	1 cut(s)	1602
PfeI	GAWTC	5 cut(s)	7, 222, 262, 554, 1603
PflMI	CCANNNNNTGG	1 cut(s)	1721
PfoI	TCCNGGA	1 cut(s)	2028
PkrI	GCNGC	6 cut(s)	47, 50, 77, 118, 121, 1564
PleI	GAGTC	4 cut(s)	379, 596, 899, 2068
PpsI	GAGTC	4 cut(s)	379, 596, 899, 2068
Ppu21I	YACGTR	1 cut(s)	880
PsiI	TTATAA	2 cut(s)	1932, 1988
Psp124BI	GAGCTC	1 cut(s)	2058
Psp6I	CCWGG	4 cut(s)	59, 296, 741, 2028
PspGI	CCWGG	4 cut(s)	59, 296, 741, 2028
PspN4I	GGNNCC	8 cut(s)	239, 446, 772, 1301, 1646, 1726, 1958, 2144
PspOMI	GGGCCC	1 cut(s)	237
PspPI	GGNCC	6 cut(s)	63, 237, 238, 973, 1048, 1725
PspXI	VCTCGAGB	1 cut(s)	2057
PstI	CTGCAG	1 cut(s)	2068
PsuI	RGATCY	2 cut(s)	1770, 1819
PvuII	CAGCTG	1 cut(s)	119
RsaI	GTAC	7 cut(s)	34, 405, 772, 878, 1443, 1756, 1767
RsaNI	GTAC	7 cut(s)	33, 404, 771, 877, 1442, 1755, 1766
SacI	GAGCTC	1 cut(s)	2058
SalI	GTCGAC	1 cut(s)	128
SapI	GCTCTTC	2 cut(s)	106, 2166
SaqAI	TTAA	7 cut(s)	359, 1008, 1013, 1164, 1691, 1788, 1940
SatI	GCNGC	6 cut(s)	46, 49, 76, 117, 120, 1563
Sau3AI	GATC	6 cut(s)	172, 623, 912, 1770, 1819, 2120
Sau96I	GGNCC	6 cut(s)	63, 237, 238, 973, 1048, 1725
ScaI	AGTACT	1 cut(s)	34
SchI	GAGTC	4 cut(s)	380, 597, 900, 2069
ScrFI	CCNGG	5 cut(s)	61, 298, 569, 743, 2030
SduI	GDGCHC	3 cut(s)	241, 1304, 2058
SfaNI	GCATC	4 cut(s)	73, 1701, 1911, 2146
SfcI	CTRYAG	1 cut(s)	2064
Sfr274I	CTCGAG	1 cut(s)	2057
SinI	GGWCC	3 cut(s)	973, 1048, 1725
SlaI	CTCGAG	1 cut(s)	2057
SmlI	CTYRAG	2 cut(s)	275, 2057
SmoI	CTYRAG	2 cut(s)	275, 2057
SpeI	ACTAGT	1 cut(s)	1894
SphI	GCATGC	1 cut(s)	634
SseBI	AGGCCT	1 cut(s)	1289
SsiI	CCGC	4 cut(s)	45, 48, 76, 137
SspMI	CTAG	2 cut(s)	887, 1895
SstI	GAGCTC	1 cut(s)	2058
StuI	AGGCCT	1 cut(s)	1289
StyD4I	CCNGG	5 cut(s)	59, 296, 567, 741, 2028
StyI	CCWWGG	2 cut(s)	1426, 1720
TaaI	ACNGT	3 cut(s)	754, 1148, 1993
TaiI	ACGT	5 cut(s)	672, 853, 882, 1063, 1094
TaqI	TCGA	5 cut(s)	129, 1412, 1507, 2058, 2119
TaqII	GACCGA	1 cut(s)	2127
TatI	WGTACW	4 cut(s)	32, 403, 1441, 1765
TauI	GCSGC	3 cut(s)	48, 51, 78
TfiI	GAWTC	5 cut(s)	7, 222, 262, 554, 1603
Tru1I	TTAA	7 cut(s)	359, 1008, 1013, 1164, 1691, 1788, 1940
Tru9I	TTAA	7 cut(s)	359, 1008, 1013, 1164, 1691, 1788, 1940
TscAI	CASTG	6 cut(s)	325, 402, 1058, 1153, 1186, 2215
TseFI	GTSAC	4 cut(s)	320, 901, 1522, 1876
TseI	GCWGC	3 cut(s)	116, 119, 1562
Tsp45I	GTSAC	4 cut(s)	320, 901, 1522, 1876
TspDTI	ATGAA	7 cut(s)	423, 589, 753, 1318, 1458, 2156, 2208
TspGWI	ACGGA	4 cut(s)	383, 437, 2113, 2155
TspRI	CASTG	6 cut(s)	325, 402, 1058, 1153, 1186, 2215
Van91I	CCANNNNNTGG	1 cut(s)	1721
VpaK11BI	GGWCC	3 cut(s)	973, 1048, 1725
XapI	RAATTY	6 cut(s)	907, 1115, 1175, 1208, 2008, 2070
XceI	RCATGY	1 cut(s)	634
XhoI	CTCGAG	1 cut(s)	2057
XmiI	GTMKAC	2 cut(s)	129, 302
XmnI	GAANNNNTTC	1 cut(s)	1602
XspI	CTAG	2 cut(s)	887, 1895
ZrmI	AGTACT	1 cut(s)	34
Zsp2I	ATGCAT	1 cut(s)	632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.