Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004348

Physical Location & Seq

Genomic Coordinates Forward (+)

39809918 .. 39820790

Gene Structure 10873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G025980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGCTCATCTTGGCTGGAATGTTTGGCACATACTTGAACGTCTTGGGTTTAGGGCTTTTATTTCTTCTGTTTTCCAGTTGGCTAGCTTATGTCATGTTTGAAGATACTGACCAGGGGACATTGGTATTTACTTCATATGGTACCACATTATATCAGATGTTTGTATTATTCACCACATCCAACAATCCAGATGTCTGGATACCAGCCTACAAGGCTTCACGTTGGTATTGCTTGTTTTTTGTTCTGTACGTGTTGCTAGGAGTCTATTTTGTCACGAATTTGATCCTTGCCGTCGTGTATGACAGCTTCAAAAGTCAGCTTGTAAAGCAAGTTTCTGAGATGGACCAGACGAGGAAAACTATACTGAAGAAAGCCTTTCATTTAATAGAAAAGGATAACGCTGGATATATCAATAAGGACCAGTGCATACGTTTGTTTGAGGAACTAAACAAATACAGGACTTTGCCAAAAATATCAAGAGAAGAATTTGAGCTGATATTTGATGAGCTGGATGACAGTGGAGACTTCAAGATCAACCTAGACGAATTCACTGACCTCTGTAACGCCATTGCCCTAAGATTCCAGAAGGAGGACACTCCATCTTGGTTTGAAAAGGTCCCTTCGTTTTACCATTCTCCCTTCTCAGAGAAGTTGAAGGCCTTTATTCGGAGCCCCAAATTTGGATACATAATATCCTTCATACTCATAATCAATCTATCTGCTGTTATAGTTGAAACTACGCTTGACATAGAAAACAATTCTGCTCAGAAGGTATGGCAATCAATGGAGTTTATCCTTGGGTGGGTATATGTACTGGAAATGGCTCTGAAAGTCTATTCATTTGGATTTGAGAACTATTGGAGGGATGGCCAAAATCGGTTTGATTTTCTGGTCACATTGATTATAGCTATTGGAGAAACGCTAACTTTTGCTGCTCCAGAAGGACTAACTTTCCTTACAAACGGAGAATGGATTCGCTACCTCCTCATTGCAAGGATGTTACGATTGATTAGGCTCCTGATGCATGTCCAGCGTTGCCGAGCCTTTATCGCCACATTCTTAACTCTTATACCAAGTTTGATGCCATACCTTGGGACCATATTTTGTGTCATGAACATCTATTGTACGCTTGGTGTACAGATCTTCGGCGGGATTGTTAATGCTGGAAATGCCAATTTGGAAGCAACAGATCTTTATGACAACGACTATCTACTTTTCAACTTCAATGACTATCCAAATGGGATGGTGACACTTTTCAATTTACTAGTCACGGGAAACTGGCAAGATTGGATGCAGAGTTACAAGGCTTTAACAGGAACTTCTTGGAGCCTTCTATATTTTGTCAGTTTCTATCTTATAACCGTCTTACTTCTACTGAATTTGGTTGTGGCTTTTGTCCTGGAGGCTTTCTTTGCTGAAATGGATCTCGAGTCTGCAGAAATTTGTGAAAACCATGAGGAGGTGGAACGAGTAAAAGGCCGACATCGATCCGTAGGGTCAAAATCACGGAGCCAGAGAGTTGATACTCTTCTTCATCATATGTTGAGTGCAGAGCTAAATGAAACGCAGTCCTCCAGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001508 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005245 GO:0005261 GO:0005262 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008324 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010119 GO:0010565 GO:0010817 GO:0012505 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019216 GO:0019217 GO:0019222 GO:0019722 GO:0019932 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031090 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0034220 GO:0035556 GO:0042304 GO:0042391 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046885 GO:0046890 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0051899 GO:0055085 GO:0062012 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0080090 GO:0080140 GO:0080141 GO:0086010 GO:0090351 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_7 Ion_trans

Protein Analysis

527

Amino Acids

60.89

Weight (kDa)

5.04

Isoelectric Point (pI)

32.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	3 - 106	1.5e-13	Ion transport protein
EF-hand_7	PF13499	122 - 186	1e-07	EF-hand domain pair
Ion_trans	PF00520	227 - 471	9.8e-41	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03560
fragaria_vesca	FvH4_6g26210 FvH4_6g26210 FvH4_6g26210 FvH4_6g26210
malus_domestica	MD09G1247300.v1.1 MD17G1240200.v1.1
prunus_persica	Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1
pyrus_communis	pycom09g16460 pycom17g24350
rosa_chinensis	RchiOBHm_Chr2g0126531 RchiOBHm_Chr2g0126551
rosa_laevigata	RLG00000018910 RLG00000018911
rosa_multiflora	Rmu_sc0002369.1_g000031 Rmu_sc0002369.1_g000036 Rmu_sc0007463.1_g000007
rosa_roxburghii	Rroxscaffold_2G00117090 Rroxscaffold_2G00117120
rosa_rugosa	Rorug02G0263600
rosa_samantha	Rh2AG320600 Rh2AG320700 Rh2BG329000 Rh2BG329100 Rh2CG308800 Rh2CG308900 Rh2DG348300 Rh2DG348400
rosa_wichuraiana	Rw2G025970 Rw2G025980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1358
Acc65I	GGTACC	1 cut(s)	140
AccB1I	GGYRCC	1 cut(s)	140
AccB7I	CCANNNNNTGG	1 cut(s)	1091
AciI	CCGC	1 cut(s)	1149
AclWI	GGATC	3 cut(s)	277, 1431, 1482
AcoI	YGGCCR	1 cut(s)	868
AcsI	RAATTY	6 cut(s)	277, 485, 545, 677, 1378, 1440
AcuI	CTGAAG	1 cut(s)	386
AfaI	GTAC	5 cut(s)	142, 248, 813, 1126, 1137
AfiI	CCNNNNNNNGG	6 cut(s)	589, 666, 680, 802, 1091, 1459
AflIII	ACRYGT	1 cut(s)	249
AhlI	ACTAGT	1 cut(s)	1264
AjnI	CCWGG	2 cut(s)	111, 1398
AluBI	AGCT	7 cut(s)	86, 306, 319, 493, 508, 908, 1555
AluI	AGCT	7 cut(s)	86, 306, 319, 493, 508, 908, 1555
Alw26I	GTCTC	1 cut(s)	516
AlwI	GGATC	3 cut(s)	277, 1431, 1482
Ama87I	CYCGRG	1 cut(s)	1427
AoxI	GGCC	3 cut(s)	657, 868, 1477
ApeKI	GCWGC	1 cut(s)	932
ApoI	RAATTY	6 cut(s)	277, 485, 545, 677, 1378, 1440
Asp700I	GAANNNNTTC	1 cut(s)	972
Asp718I	GGTACC	1 cut(s)	140
AspS9I	GGNCC	4 cut(s)	343, 418, 616, 1095
AsuHPI	GGTGA	2 cut(s)	163, 1258
AsuNHI	GCTAGC	1 cut(s)	82
AvaI	CYCGRG	1 cut(s)	1427
AvaII	GGWCC	4 cut(s)	343, 418, 616, 1095
BalI	TGGCCA	1 cut(s)	870
BanI	GGYRCC	1 cut(s)	140
BanII	GRGCYC	1 cut(s)	674
BarI	GAAGNNNNNNTAC	2 cut(s)	290, 322
BbvI	GCAGC	1 cut(s)	919
BccI	CCATC	4 cut(s)	334, 607, 860, 1237
BceAI	ACGGC	1 cut(s)	275
BciT130I	CCWGG	2 cut(s)	113, 1400
BciVI	GTATCC	2 cut(s)	192, 677
BcoDI	GTCTC	1 cut(s)	516
BcuI	ACTAGT	1 cut(s)	1264
BfaI	CTAG	4 cut(s)	83, 257, 539, 1265
BfmI	CTRYAG	1 cut(s)	1434
BfuI	GTATCC	2 cut(s)	192, 677
BglI	GCCNNNNNGGC	1 cut(s)	212
BglII	AGATCT	2 cut(s)	1140, 1189
BisI	GCNGC	1 cut(s)	933
BlsI	GCNGC	1 cut(s)	934
Bme1390I	CCNGG	2 cut(s)	113, 1400
Bme18I	GGWCC	4 cut(s)	343, 418, 616, 1095
BmeT110I	CYCGRG	1 cut(s)	1427
BmgT120I	GGNCC	4 cut(s)	343, 418, 616, 1095
BmiI	GGNNCC	7 cut(s)	142, 618, 671, 1016, 1096, 1328, 1511
BmrFI	CCNGG	2 cut(s)	113, 1400
BmsI	GCATC	3 cut(s)	1011, 1071, 1281
BmtI	GCTAGC	1 cut(s)	86
BpmI	CTGGAG	3 cut(s)	921, 1421, 1558
Bsa29I	ATCGAT	1 cut(s)	1486
BsaAI	YACGTR	1 cut(s)	250
BsaJI	CCNNGG	3 cut(s)	112, 796, 1090
Bsc4I	CCNNNNNNNGG	6 cut(s)	589, 666, 680, 802, 1091, 1459
Bse1I	ACTGG	5 cut(s)	75, 421, 819, 1283, 1575
Bse3DI	GCAATG	2 cut(s)	567, 987
BseBI	CCWGG	2 cut(s)	113, 1400
BseCI	ATCGAT	1 cut(s)	1486
BseDI	CCNNGG	3 cut(s)	112, 796, 1090
BseGI	GGATG	6 cut(s)	176, 517, 871, 1002, 1248, 1296
BseLI	CCNNNNNNNGG	6 cut(s)	589, 666, 680, 802, 1091, 1459
BseMI	GCAATG	2 cut(s)	567, 987
BseMII	CTCAG	3 cut(s)	327, 657, 779
BseNI	ACTGG	5 cut(s)	75, 421, 819, 1283, 1575
BseRI	GAGGAG	2 cut(s)	974, 1472
BseXI	GCAGC	1 cut(s)	919
BsgI	GTGCAG	1 cut(s)	1569
BshFI	GGCC	3 cut(s)	659, 870, 1479
BshNI	GGYRCC	1 cut(s)	140
BshVI	ATCGAT	1 cut(s)	1486
BsiHKCI	CYCGRG	1 cut(s)	1427
BslFI	GGGAC	3 cut(s)	130, 602, 1108
BslI	CCNNNNNNNGG	6 cut(s)	589, 666, 680, 802, 1091, 1459
BsmAI	GTCTC	1 cut(s)	516
BsmFI	GGGAC	3 cut(s)	130, 602, 1108
BsnI	GGCC	3 cut(s)	659, 870, 1479
BsoBI	CYCGRG	1 cut(s)	1427
Bsp1286I	GDGCHC	1 cut(s)	674
Bsp1407I	TGTACA	1 cut(s)	1135
Bsp143I	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
BspACI	CCGC	1 cut(s)	1149
BspANI	GGCC	3 cut(s)	659, 870, 1479
BspCNI	CTCAG	3 cut(s)	328, 656, 778
BspDI	ATCGAT	1 cut(s)	1486
BspHI	TCATGA	1 cut(s)	1110
BspLI	GGNNCC	7 cut(s)	142, 618, 671, 1016, 1096, 1328, 1511
BspMAI	CTGCAG	1 cut(s)	1438
BspOI	GCTAGC	1 cut(s)	86
BspPI	GGATC	3 cut(s)	277, 1431, 1482
BspT107I	GGYRCC	1 cut(s)	140
BsrDI	GCAATG	2 cut(s)	567, 987
BsrGI	TGTACA	1 cut(s)	1135
BsrI	ACTGG	5 cut(s)	75, 421, 819, 1283, 1575
BssECI	CCNNGG	3 cut(s)	112, 796, 1090
BssMI	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
BssT1I	CCWWGG	2 cut(s)	796, 1090
Bst2UI	CCWGG	2 cut(s)	113, 1400
Bst4CI	ACNGT	2 cut(s)	518, 1363
Bst6I	CTCTTC	1 cut(s)	1533
BstAUI	TGTACA	1 cut(s)	1135
BstBAI	YACGTR	1 cut(s)	250
BstC8I	GCNNGC	1 cut(s)	84
BstDEI	CTNAG	4 cut(s)	336, 575, 643, 765
BstF5I	GGATG	6 cut(s)	176, 517, 871, 1002, 1248, 1296
BstKTI	GATC	6 cut(s)	285, 534, 1143, 1192, 1426, 1490
BstMAI	GTCTC	1 cut(s)	516
BstMBI	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
BstMWI	GCNNNNNNNGC	7 cut(s)	212, 325, 1021, 1030, 1049, 1169, 1412
BstNI	CCWGG	2 cut(s)	113, 1400
BstNSI	RCATGY	1 cut(s)	1028
BstSCI	CCNGG	2 cut(s)	111, 1398
BstSFI	CTRYAG	1 cut(s)	1434
BstV1I	GCAGC	1 cut(s)	919
BstX2I	RGATCY	3 cut(s)	1140, 1189, 1423
BstXI	CCANNNNNNTGG	1 cut(s)	195
BstYI	RGATCY	3 cut(s)	1140, 1189, 1423
Bsu15I	ATCGAT	1 cut(s)	1486
BsuI	GTATCC	2 cut(s)	192, 677
BsuRI	GGCC	3 cut(s)	659, 870, 1479
BsuTUI	ATCGAT	1 cut(s)	1486
BtsCI	GGATG	6 cut(s)	176, 517, 871, 1002, 1248, 1296
BtsIMutI	CAGTG	4 cut(s)	428, 523, 549, 1582
Cac8I	GCNNGC	1 cut(s)	84
CciI	TCATGA	1 cut(s)	1110
Cfr13I	GGNCC	4 cut(s)	343, 418, 616, 1095
ClaI	ATCGAT	1 cut(s)	1486
Csp6I	GTAC	5 cut(s)	141, 247, 812, 1125, 1136
CviAII	CATG	4 cut(s)	94, 1025, 1111, 1454
CviQI	GTAC	5 cut(s)	141, 247, 812, 1125, 1136
DdeI	CTNAG	4 cut(s)	336, 575, 643, 765
DpnI	GATC	6 cut(s)	284, 533, 1142, 1191, 1425, 1489
DpnII	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
EaeI	YGGCCR	1 cut(s)	868
Eam1104I	CTCTTC	1 cut(s)	1533
EarI	CTCTTC	1 cut(s)	1533
Eco130I	CCWWGG	2 cut(s)	796, 1090
Eco147I	AGGCCT	1 cut(s)	659
Eco24I	GRGCYC	1 cut(s)	674
Eco47I	GGWCC	4 cut(s)	343, 418, 616, 1095
Eco57I	CTGAAG	1 cut(s)	386
Eco88I	CYCGRG	1 cut(s)	1427
EcoO109I	RGGNCCY	1 cut(s)	616
EcoRI	GAATTC	1 cut(s)	545
EcoRII	CCWGG	2 cut(s)	111, 1398
EcoT14I	CCWWGG	2 cut(s)	796, 1090
EcoT22I	ATGCAT	1 cut(s)	1026
EcoT38I	GRGCYC	1 cut(s)	674
ErhI	CCWWGG	2 cut(s)	796, 1090
FaeI	CATG	4 cut(s)	97, 1028, 1114, 1457
FalI	AAGNNNNNCTT	2 cut(s)	359, 391
FaqI	GGGAC	3 cut(s)	130, 602, 1108
FatI	CATG	4 cut(s)	93, 1024, 1110, 1453
FauI	CCCGC	1 cut(s)	1142
FauNDI	CATATG	2 cut(s)	136, 1539
Fnu4HI	GCNGC	1 cut(s)	933
FokI	GGATG	6 cut(s)	163, 524, 878, 1009, 1255, 1303
FriOI	GRGCYC	1 cut(s)	674
Fsp4HI	GCNGC	1 cut(s)	933
FspBI	CTAG	4 cut(s)	83, 257, 539, 1265
GluI	GCNGC	1 cut(s)	933
GsuI	CTGGAG	3 cut(s)	921, 1421, 1558
HaeIII	GGCC	3 cut(s)	659, 870, 1479
Hin1II	CATG	4 cut(s)	97, 1028, 1114, 1457
HinfI	GANTC	4 cut(s)	261, 579, 973, 1430
HphI	GGTGA	2 cut(s)	163, 1258
Hpy166II	GTNNAC	1 cut(s)	1136
Hpy188I	TCNGA	6 cut(s)	156, 337, 646, 669, 768, 828
Hpy8I	GTNNAC	1 cut(s)	1136
Hpy99I	CGWCG	1 cut(s)	296
HpyAV	CCTTC	8 cut(s)	580, 630, 649, 649, 706, 763, 935, 1340
HpyCH4III	ACNGT	2 cut(s)	518, 1363
HpyCH4IV	ACGT	4 cut(s)	39, 220, 249, 430
HpyCH4V	TGCA	7 cut(s)	426, 992, 1024, 1294, 1436, 1550, 1580
HpyF10VI	GCNNNNNNNGC	7 cut(s)	212, 325, 1021, 1030, 1049, 1169, 1412
HpyF3I	CTNAG	4 cut(s)	336, 575, 643, 765
HpySE526I	ACGT	4 cut(s)	39, 220, 249, 430
Hsp92II	CATG	4 cut(s)	97, 1028, 1114, 1457
KpnI	GGTACC	1 cut(s)	144
Kzo9I	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
LmnI	GCTCC	5 cut(s)	669, 940, 1020, 1326, 1509
Lsp1109I	GCAGC	1 cut(s)	919
LweI	GCATC	3 cut(s)	1011, 1071, 1281
MaeI	CTAG	4 cut(s)	83, 257, 539, 1265
MaeII	ACGT	4 cut(s)	39, 220, 249, 430
MaeIII	GTNAC	7 cut(s)	271, 560, 892, 999, 1246, 1267, 1298
MalI	GATC	6 cut(s)	284, 533, 1142, 1191, 1425, 1489
MboI	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
MboII	GAAGA	7 cut(s)	56, 113, 379, 494, 1135, 1520, 1523
MflI	RGATCY	3 cut(s)	1140, 1189, 1423
MhlI	GDGCHC	1 cut(s)	674
MlsI	TGGCCA	1 cut(s)	870
MluCI	AATT	9 cut(s)	277, 485, 545, 677, 757, 1174, 1258, 1378, 1440
MluNI	TGGCCA	1 cut(s)	870
MlyI	GAGTC	2 cut(s)	270, 1439
MmeI	TCCRAC	1 cut(s)	204
Mox20I	TGGCCA	1 cut(s)	870
Mph1103I	ATGCAT	1 cut(s)	1026
MroXI	GAANNNNTTC	1 cut(s)	972
MscI	TGGCCA	1 cut(s)	870
MseI	TTAA	4 cut(s)	383, 1061, 1158, 1310
Msp20I	TGGCCA	1 cut(s)	870
MspR9I	CCNGG	2 cut(s)	113, 1400
MvaI	CCWGG	2 cut(s)	113, 1400
MwoI	GCNNNNNNNGC	7 cut(s)	212, 325, 1021, 1030, 1049, 1169, 1412
NdeI	CATATG	2 cut(s)	136, 1539
NdeII	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
NheI	GCTAGC	1 cut(s)	82
NlaIII	CATG	4 cut(s)	97, 1028, 1114, 1457
NlaIV	GGNNCC	7 cut(s)	142, 618, 671, 1016, 1096, 1328, 1511
NmeAIII	GCCGAG	1 cut(s)	1064
NmuCI	GTSAC	4 cut(s)	271, 892, 1246, 1267
NsiI	ATGCAT	1 cut(s)	1026
NspI	RCATGY	1 cut(s)	1028
PaeR7I	CTCGAG	1 cut(s)	1427
PagI	TCATGA	1 cut(s)	1110
PceI	AGGCCT	1 cut(s)	659
PdmI	GAANNNNTTC	1 cut(s)	972
PfeI	GAWTC	2 cut(s)	579, 973
PflMI	CCANNNNNTGG	1 cut(s)	1091
PfoI	TCCNGGA	1 cut(s)	1398
PkrI	GCNGC	1 cut(s)	934
PleI	GAGTC	2 cut(s)	269, 1438
PpsI	GAGTC	2 cut(s)	269, 1438
Ppu21I	YACGTR	1 cut(s)	250
PpuMI	RGGWCCY	1 cut(s)	616
PsiI	TTATAA	1 cut(s)	1358
Psp5II	RGGWCCY	1 cut(s)	616
Psp6I	CCWGG	2 cut(s)	111, 1398
PspGI	CCWGG	2 cut(s)	111, 1398
PspN4I	GGNNCC	7 cut(s)	142, 618, 671, 1016, 1096, 1328, 1511
PspPI	GGNCC	4 cut(s)	343, 418, 616, 1095
PspPPI	RGGWCCY	1 cut(s)	616
PstI	CTGCAG	1 cut(s)	1438
PsuI	RGATCY	3 cut(s)	1140, 1189, 1423
RsaI	GTAC	5 cut(s)	142, 248, 813, 1126, 1137
RsaNI	GTAC	5 cut(s)	141, 247, 812, 1125, 1136
SaqAI	TTAA	4 cut(s)	383, 1061, 1158, 1310
SatI	GCNGC	1 cut(s)	933
Sau3AI	GATC	6 cut(s)	282, 531, 1140, 1189, 1423, 1487
Sau96I	GGNCC	4 cut(s)	343, 418, 616, 1095
SchI	GAGTC	2 cut(s)	270, 1439
ScrFI	CCNGG	2 cut(s)	113, 1400
SduI	GDGCHC	1 cut(s)	674
SfaNI	GCATC	3 cut(s)	1011, 1071, 1281
SfcI	CTRYAG	1 cut(s)	1434
Sfr274I	CTCGAG	1 cut(s)	1427
SinI	GGWCC	4 cut(s)	343, 418, 616, 1095
SlaI	CTCGAG	1 cut(s)	1427
SmlI	CTYRAG	1 cut(s)	1427
SmoI	CTYRAG	1 cut(s)	1427
SpeI	ACTAGT	1 cut(s)	1264
Sse9I	AATT	9 cut(s)	277, 485, 545, 677, 757, 1174, 1258, 1378, 1440
SseBI	AGGCCT	1 cut(s)	659
SsiI	CCGC	1 cut(s)	1149
SspMI	CTAG	4 cut(s)	83, 257, 539, 1265
StuI	AGGCCT	1 cut(s)	659
StyD4I	CCNGG	2 cut(s)	111, 1398
StyI	CCWWGG	2 cut(s)	796, 1090
TaaI	ACNGT	2 cut(s)	518, 1363
TaiI	ACGT	4 cut(s)	42, 223, 252, 433
TaqI	TCGA	2 cut(s)	1428, 1486
TasI	AATT	9 cut(s)	277, 485, 545, 677, 757, 1174, 1258, 1378, 1440
TatI	WGTACW	2 cut(s)	811, 1135
TfiI	GAWTC	2 cut(s)	579, 973
Tru1I	TTAA	4 cut(s)	383, 1061, 1158, 1310
Tru9I	TTAA	4 cut(s)	383, 1061, 1158, 1310
TscAI	CASTG	4 cut(s)	428, 523, 556, 1582
TseFI	GTSAC	4 cut(s)	271, 892, 1246, 1267
TseI	GCWGC	1 cut(s)	932
Tsp45I	GTSAC	4 cut(s)	271, 892, 1246, 1267
TspDTI	ATGAA	7 cut(s)	123, 368, 688, 828, 1127, 1523, 1575
TspGWI	ACGGA	3 cut(s)	978, 1480, 1522
TspRI	CASTG	4 cut(s)	428, 523, 556, 1582
Van91I	CCANNNNNTGG	1 cut(s)	1091
VpaK11BI	GGWCC	4 cut(s)	343, 418, 616, 1095
XapI	RAATTY	6 cut(s)	277, 485, 545, 677, 1378, 1440
XceI	RCATGY	1 cut(s)	1028
XhoI	CTCGAG	1 cut(s)	1427
XmnI	GAANNNNTTC	1 cut(s)	972
XspI	CTAG	4 cut(s)	83, 257, 539, 1265
Zsp2I	ATGCAT	1 cut(s)	1026

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.