Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004348

Physical Location & Seq

Genomic Coordinates Forward (+)

42706751 .. 42720131

Gene Structure 13381 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018911

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGAGGACCCATTGCTTAACGGAGAAGGCACTAGTCCCCGACGCGGCAGCGGCGATTTGTCCAGGGCCTTCAAACGCCGCTCCGATGCCATCACATTCGGCTCTTCTTATCAGAAAGCAGCAGCTCTCGTCGACTTGGCGGAGGACGGCATTGGCTTACCTGAGCAGATACTTGATCTCTCATCTTTTCATACCTCTGCAAAATACTACTTCCTTTATATGCGATTCAGCTTCCTCTGGGCCCTACTCTACTTCGCCCTCTTGATTCTCAATTTCCTTGAGAAACCTCTGTGGTGTGCCAGGTATACAGATCATACTTGCAGTGACAGGGATTACTACTATCTCGGCCAATTGCCCTACTTGACTCCTACAGAGTCCCTTATTTATGAGGGCATAACACTGATTGTACTCATGGTGCATATTTTCTTTCCAATTTCATATGTGGGGTTCCGTCTCTATTGGAATAGTCCTCTTACTCAATTCAAGATCATATGCCTGTTGATTTTGGTTGCTGATTTGCTGGCTTATGTTCTCTATTTGTCTCCAGTTGCCTTTGATTCTCTCCCTTTACGGGTTGCTCCATATATCAGAGTCATCTTTTTCATATTGAACTTTAGGGAATTACGATCGTGCATGCTCATCTTGGCTGGAATGTTTGGCACATACTTGAACGTCTTGGGTTTAGGGCTTTTATTTCTTCTGTTTTCCAGTTGGCTAGCTTATGTCATGTTTGAAGATACTGACCAGGGGACAATAGTATTTACTTCATATGGTACCACATTATATCAGATGTTTGTTTTATTCACCACATCCAACAATCCAGATGTCTGGATACCAGCCTACAAGGCTTCACGTTGGTATTGCTTGTTTTTTGTTCTGTACGTGTTGCTAGGAGTCTATTTTGTCACAAATTTGATCCTTGCCGTCGTGTATGACAGCTTCAAAAGTCAGCTTGTAAAGCAAGTTTCTGAGATGGACCAGATGAGGAAAACTATACTGAAGAAAGCCTTTCATTTAATAGAAAAGGATAACGCTGGATATATCAATAAGGACCAGTGCATACGTTTGTTTGAGGAACTAAACAAATACAGGACTTTGCCAAAAATATCAAGAGAAGAATTTGAGCTGATATTTGATGAGCTGGATGACAGTGGAGACTTCAAGATCAACTTAGACGAATTCACTGACCTCTGTAACGCCATTGCCCTAAGATTCCAGAAGGAGGATACTCCATCTTGGTTTGAAAAGTTCCCTTCGTTTTACCATTCTCCCTTCTCAGAGAAGTTGAAGGTCTTTATTCGGGGCCCCAAATTTGGATACATAATATCCTTCATACTCATAATCAATCTTTCTGCTGTTATCGTTGAAACTACGCTTGACATAGAAAACAATTCTGCTCAGAAGGTATGGCAATCAATGGAGTTTATCCTTGGGTGGGTATATGTACTGGAAATGGCTCTGAAAGTCTATTCATTTGGATTTGAGAACTATTGGAGGGATGGCCAAAATCGGTTTGATTTTCTGGTCACATTGATAATAGCTATTGGAGAAACGCTAACTTTTGCTGCTCCAGAAGGACTAACTTTCCTTACAAACGGAGAATGGATTCGCTACCTCCTCATTGCAAGGATGTTACGATTGATTAGGCTCCTGATGCATGTCCAGCGTTGTCGAGCCTTTATCGCCACATTCTTAACTCTTATACCAAGTTTGATGCCATATCTTGGGACCATATTTTGTGTCATGAACATCTATTGTACGCTTGGTGTACAGATCTTCGGCGGGATTGTTAATGCTGGAAATGCCAATTTGAAAGCAACAGATCTTTATGACAACGACTATCTACTTTTCAACTTCAATGACTATCCAAATGGGATGGTGACACTATTCAATTTACTAGTCACGGGAAACTGGCAAGATTGGATGCAGAGTTACAAGGCTTTAACAGGAACTTCTTGGAGCCTTCTATATTTTGTCAGTTTCTATCTTATAACTGTCTTACTTCTACTGAATTTGGTTGTGGCTTTTGTCCTGGAGGCTTTCTTTGCTGAAATGGATCTCGAGTCTGCAGAAATTTGTGAAAAACATGAGGAGGTGGAACGAGTAAAAGGCCGACATCGATCCGTAGGGTCAAAATCACGGAGCCAGAGAGTTGATGCTCTTCTTCATCATATGTTGAGTGCGGAGCTAAATGAAACGCAGTCCTCCAGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001508 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005245 GO:0005261 GO:0005262 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008324 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010119 GO:0010565 GO:0010817 GO:0012505 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019216 GO:0019217 GO:0019222 GO:0019722 GO:0019932 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031090 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0034220 GO:0035556 GO:0042304 GO:0042391 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046885 GO:0046890 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0051899 GO:0055085 GO:0062012 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0080090 GO:0080140 GO:0080141 GO:0086010 GO:0090351 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_7 Ion_trans

Protein Analysis

739

Amino Acids

85.32

Weight (kDa)

5.42

Isoelectric Point (pI)

35.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	130 - 317	5.8e-16	Ion transport protein
EF-hand_7	PF13499	333 - 397	1.7e-07	EF-hand domain pair
Ion_trans	PF00520	438 - 682	2e-40	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03560
fragaria_vesca	FvH4_6g26210 FvH4_6g26210 FvH4_6g26210 FvH4_6g26210
malus_domestica	MD09G1247300.v1.1 MD17G1240200.v1.1
prunus_persica	Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1 Prupe.3G138600_v2.0.a1
pyrus_communis	pycom09g16460 pycom17g24350
rosa_chinensis	RchiOBHm_Chr2g0126531 RchiOBHm_Chr2g0126551
rosa_laevigata	RLG00000018910 RLG00000018911
rosa_multiflora	Rmu_sc0002369.1_g000031 Rmu_sc0002369.1_g000036 Rmu_sc0007463.1_g000007
rosa_roxburghii	Rroxscaffold_2G00117090 Rroxscaffold_2G00117120
rosa_rugosa	Rorug02G0263600
rosa_samantha	Rh2AG320600 Rh2AG320700 Rh2BG329000 Rh2BG329100 Rh2CG308800 Rh2CG308900 Rh2DG348300 Rh2DG348400
rosa_wichuraiana	Rw2G025970 Rw2G025980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1991
Acc65I	GGTACC	1 cut(s)	773
AccB1I	GGYRCC	1 cut(s)	773
AccB7I	CCANNNNNTGG	1 cut(s)	1724
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	2 cut(s)	132, 305
AccII	CGCG	1 cut(s)	45
AciI	CCGC	6 cut(s)	45, 51, 79, 140, 1782, 2183
AclWI	GGATC	3 cut(s)	910, 2064, 2115
AcoI	YGGCCR	2 cut(s)	346, 1501
AcsI	RAATTY	6 cut(s)	910, 1118, 1178, 1310, 2011, 2073
AcuI	CTGAAG	1 cut(s)	1019
AfaI	GTAC	6 cut(s)	408, 775, 881, 1446, 1759, 1770
AfiI	CCNNNNNNNGG	6 cut(s)	44, 571, 1222, 1313, 1435, 1724
AflIII	ACRYGT	1 cut(s)	882
AhlI	ACTAGT	2 cut(s)	32, 1897
AjnI	CCWGG	4 cut(s)	62, 299, 744, 2031
AluBI	AGCT	9 cut(s)	125, 231, 719, 939, 952, 1126, 1141, 1541, 2188
AluI	AGCT	9 cut(s)	125, 231, 719, 939, 952, 1126, 1141, 1541, 2188
Alw26I	GTCTC	3 cut(s)	458, 546, 1149
AlwI	GGATC	3 cut(s)	910, 2064, 2115
Ama87I	CYCGRG	1 cut(s)	2060
AoxI	GGCC	6 cut(s)	66, 240, 346, 1303, 1501, 2110
ApaI	GGGCCC	2 cut(s)	244, 1307
ApeKI	GCWGC	4 cut(s)	48, 119, 122, 1565
ApoI	RAATTY	6 cut(s)	910, 1118, 1178, 1310, 2011, 2073
Asp700I	GAANNNNTTC	1 cut(s)	1605
Asp718I	GGTACC	1 cut(s)	773
AspS9I	GGNCC	9 cut(s)	7, 66, 240, 241, 976, 1051, 1303, 1304, 1728
AsuHPI	GGTGA	2 cut(s)	796, 1891
AsuNHI	GCTAGC	1 cut(s)	715
AvaI	CYCGRG	1 cut(s)	2060
AvaII	GGWCC	4 cut(s)	7, 976, 1051, 1728
BaeGI	GKGCMC	2 cut(s)	244, 1307
BalI	TGGCCA	1 cut(s)	1503
BanI	GGYRCC	1 cut(s)	773
BanII	GRGCYC	2 cut(s)	244, 1307
BarI	GAAGNNNNNNTAC	2 cut(s)	923, 955
BbvI	GCAGC	4 cut(s)	60, 131, 134, 1552
BccI	CCATC	5 cut(s)	98, 967, 1240, 1493, 1870
BceAI	ACGGC	2 cut(s)	163, 908
BciT130I	CCWGG	4 cut(s)	64, 301, 746, 2033
BciVI	GTATCC	3 cut(s)	825, 1219, 1310
BcoDI	GTCTC	3 cut(s)	458, 546, 1149
BcuI	ACTAGT	2 cut(s)	32, 1897
BfaI	CTAG	4 cut(s)	33, 716, 890, 1898
BfmI	CTRYAG	2 cut(s)	369, 2067
BfuI	GTATCC	3 cut(s)	825, 1219, 1310
BglI	GCCNNNNNGGC	1 cut(s)	845
BglII	AGATCT	2 cut(s)	1773, 1822
BisI	GCNGC	7 cut(s)	46, 49, 52, 79, 120, 123, 1566
BlsI	GCNGC	7 cut(s)	47, 50, 53, 80, 121, 124, 1567
Bme1390I	CCNGG	4 cut(s)	64, 301, 746, 2033
Bme18I	GGWCC	4 cut(s)	7, 976, 1051, 1728
BmeT110I	CYCGRG	1 cut(s)	2060
BmgT120I	GGNCC	9 cut(s)	7, 66, 240, 241, 976, 1051, 1303, 1304, 1728
BmrFI	CCNGG	4 cut(s)	64, 301, 746, 2033
BmsI	GCATC	5 cut(s)	76, 1644, 1704, 1914, 2146
BmtI	GCTAGC	1 cut(s)	719
BpmI	CTGGAG	4 cut(s)	528, 1554, 2054, 2191
Bpu10I	CCTNAGC	1 cut(s)	162
BpuEI	CTTGAG	1 cut(s)	299
Bsa29I	ATCGAT	1 cut(s)	2119
BsaAI	YACGTR	1 cut(s)	883
BsaJI	CCNNGG	3 cut(s)	63, 745, 1429
Bsc4I	CCNNNNNNNGG	6 cut(s)	44, 571, 1222, 1313, 1435, 1724
Bse1I	ACTGG	6 cut(s)	545, 708, 1054, 1452, 1916, 2208
Bse3DI	GCAATG	3 cut(s)	11, 1200, 1620
BseBI	CCWGG	4 cut(s)	64, 301, 746, 2033
BseCI	ATCGAT	1 cut(s)	2119
BseDI	CCNNGG	3 cut(s)	63, 745, 1429
BseGI	GGATG	6 cut(s)	809, 1150, 1504, 1635, 1881, 1929
BseLI	CCNNNNNNNGG	6 cut(s)	44, 571, 1222, 1313, 1435, 1724
BseMI	GCAATG	3 cut(s)	11, 1200, 1620
BseMII	CTCAG	4 cut(s)	153, 960, 1290, 1412
BseNI	ACTGG	6 cut(s)	545, 708, 1054, 1452, 1916, 2208
BseRI	GAGGAG	2 cut(s)	1607, 2105
BseSI	GKGCMC	2 cut(s)	244, 1307
BseXI	GCAGC	4 cut(s)	60, 131, 134, 1552
Bsh1236I	CGCG	1 cut(s)	45
Bsh1285I	CGRYCG	1 cut(s)	629
BshFI	GGCC	6 cut(s)	68, 242, 348, 1305, 1503, 2112
BshNI	GGYRCC	1 cut(s)	773
BshVI	ATCGAT	1 cut(s)	2119
BsiEI	CGRYCG	1 cut(s)	629
BsiHKCI	CYCGRG	1 cut(s)	2060
BslFI	GGGAC	4 cut(s)	21, 361, 763, 1741
BslI	CCNNNNNNNGG	6 cut(s)	44, 571, 1222, 1313, 1435, 1724
BsmAI	GTCTC	3 cut(s)	458, 546, 1149
BsmBI	CGTCTC	1 cut(s)	458
BsmFI	GGGAC	4 cut(s)	21, 361, 763, 1741
BsnI	GGCC	6 cut(s)	68, 242, 348, 1305, 1503, 2112
BsoBI	CYCGRG	1 cut(s)	2060
Bsp120I	GGGCCC	2 cut(s)	240, 1303
Bsp1286I	GDGCHC	2 cut(s)	244, 1307
Bsp1407I	TGTACA	1 cut(s)	1768
BspACI	CCGC	6 cut(s)	45, 51, 79, 140, 1782, 2183
BspANI	GGCC	6 cut(s)	68, 242, 348, 1305, 1503, 2112
BspCNI	CTCAG	4 cut(s)	154, 961, 1289, 1411
BspDI	ATCGAT	1 cut(s)	2119
BspFNI	CGCG	1 cut(s)	45
BspHI	TCATGA	1 cut(s)	1743
BspMAI	CTGCAG	1 cut(s)	2071
BspOI	GCTAGC	1 cut(s)	719
BspPI	GGATC	3 cut(s)	910, 2064, 2115
BspQI	GCTCTTC	2 cut(s)	109, 2166
BspT107I	GGYRCC	1 cut(s)	773
BsrBI	CCGCTC	1 cut(s)	81
BsrDI	GCAATG	3 cut(s)	11, 1200, 1620
BsrGI	TGTACA	1 cut(s)	1768
BsrI	ACTGG	6 cut(s)	545, 708, 1054, 1452, 1916, 2208
BssECI	CCNNGG	3 cut(s)	63, 745, 1429
BssNAI	GTATAC	1 cut(s)	306
BssT1I	CCWWGG	1 cut(s)	1429
Bst1107I	GTATAC	1 cut(s)	306
Bst2UI	CCWGG	4 cut(s)	64, 301, 746, 2033
Bst4CI	ACNGT	2 cut(s)	1151, 1996
Bst6I	CTCTTC	2 cut(s)	109, 2166
BstAUI	TGTACA	1 cut(s)	1768
BstBAI	YACGTR	1 cut(s)	883
BstC8I	GCNNGC	3 cut(s)	522, 635, 717
BstDEI	CTNAG	6 cut(s)	162, 969, 1171, 1208, 1276, 1398
BstF5I	GGATG	6 cut(s)	809, 1150, 1504, 1635, 1881, 1929
BstFNI	CGCG	1 cut(s)	45
BstMAI	GTCTC	3 cut(s)	458, 546, 1149
BstMCI	CGRYCG	1 cut(s)	629
BstMWI	GCNNNNNNNGC	8 cut(s)	51, 845, 958, 1654, 1663, 1682, 1802, 2045
BstNI	CCWGG	4 cut(s)	64, 301, 746, 2033
BstNSI	RCATGY	2 cut(s)	637, 1661
BstSCI	CCNGG	4 cut(s)	62, 299, 744, 2031
BstSFI	CTRYAG	2 cut(s)	369, 2067
BstSLI	GKGCMC	2 cut(s)	244, 1307
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	4 cut(s)	60, 131, 134, 1552
BstX2I	RGATCY	3 cut(s)	1773, 1822, 2056
BstXI	CCANNNNNNTGG	1 cut(s)	828
BstYI	RGATCY	3 cut(s)	1773, 1822, 2056
BstZ17I	GTATAC	1 cut(s)	306
Bsu15I	ATCGAT	1 cut(s)	2119
BsuI	GTATCC	3 cut(s)	825, 1219, 1310
BsuRI	GGCC	6 cut(s)	68, 242, 348, 1305, 1503, 2112
BsuTUI	ATCGAT	1 cut(s)	2119
BtsCI	GGATG	6 cut(s)	809, 1150, 1504, 1635, 1881, 1929
BtsI	GCAGTG	1 cut(s)	328
BtsIMutI	CAGTG	6 cut(s)	328, 398, 1061, 1156, 1182, 2215
Cac8I	GCNNGC	3 cut(s)	522, 635, 717
CciI	TCATGA	1 cut(s)	1743
Cfr13I	GGNCC	9 cut(s)	7, 66, 240, 241, 976, 1051, 1303, 1304, 1728
ClaI	ATCGAT	1 cut(s)	2119
CseI	GACGC	1 cut(s)	51
Csp6I	GTAC	6 cut(s)	407, 774, 880, 1445, 1758, 1769
CviAII	CATG	6 cut(s)	412, 634, 727, 1658, 1744, 2087
CviQI	GTAC	6 cut(s)	407, 774, 880, 1445, 1758, 1769
DdeI	CTNAG	6 cut(s)	162, 969, 1171, 1208, 1276, 1398
EaeI	YGGCCR	2 cut(s)	346, 1501
Eam1104I	CTCTTC	2 cut(s)	109, 2166
EarI	CTCTTC	2 cut(s)	109, 2166
EciI	GGCGGA	1 cut(s)	155
Eco130I	CCWWGG	1 cut(s)	1429
Eco24I	GRGCYC	2 cut(s)	244, 1307
Eco47I	GGWCC	4 cut(s)	7, 976, 1051, 1728
Eco57I	CTGAAG	1 cut(s)	1019
Eco88I	CYCGRG	1 cut(s)	2060
EcoO109I	RGGNCCY	5 cut(s)	7, 66, 241, 1303, 1304
EcoRI	GAATTC	1 cut(s)	1178
EcoRII	CCWGG	4 cut(s)	62, 299, 744, 2031
EcoT14I	CCWWGG	1 cut(s)	1429
EcoT22I	ATGCAT	1 cut(s)	1659
EcoT38I	GRGCYC	2 cut(s)	244, 1307
ErhI	CCWWGG	1 cut(s)	1429
Esp3I	CGTCTC	1 cut(s)	458
FaeI	CATG	6 cut(s)	415, 637, 730, 1661, 1747, 2090
FalI	AAGNNNNNCTT	4 cut(s)	992, 1024, 1154, 1186
FaqI	GGGAC	4 cut(s)	21, 361, 763, 1741
FatI	CATG	6 cut(s)	411, 633, 726, 1657, 1743, 2086
FauI	CCCGC	1 cut(s)	1775
FauNDI	CATATG	4 cut(s)	439, 491, 769, 2172
FblI	GTMKAC	2 cut(s)	132, 305
Fnu4HI	GCNGC	7 cut(s)	46, 49, 52, 79, 120, 123, 1566
FokI	GGATG	6 cut(s)	796, 1157, 1511, 1642, 1888, 1936
FriOI	GRGCYC	2 cut(s)	244, 1307
Fsp4HI	GCNGC	7 cut(s)	46, 49, 52, 79, 120, 123, 1566
FspBI	CTAG	4 cut(s)	33, 716, 890, 1898
GluI	GCNGC	7 cut(s)	46, 49, 52, 79, 120, 123, 1566
GsuI	CTGGAG	4 cut(s)	528, 1554, 2054, 2191
HaeIII	GGCC	6 cut(s)	68, 242, 348, 1305, 1503, 2112
HgaI	GACGC	1 cut(s)	51
Hin1II	CATG	6 cut(s)	415, 637, 730, 1661, 1747, 2090
HincII	GTYRAC	1 cut(s)	133
HindII	GTYRAC	1 cut(s)	133
HphI	GGTGA	2 cut(s)	796, 1891
Hpy166II	GTNNAC	3 cut(s)	133, 306, 1769
Hpy188I	TCNGA	8 cut(s)	85, 114, 590, 789, 970, 1279, 1401, 1461
Hpy8I	GTNNAC	3 cut(s)	133, 306, 1769
Hpy99I	CGWCG	3 cut(s)	45, 134, 929
HpyCH4III	ACNGT	2 cut(s)	1151, 1996
HpyCH4IV	ACGT	4 cut(s)	672, 853, 882, 1063
HpyF10VI	GCNNNNNNNGC	8 cut(s)	51, 845, 958, 1654, 1663, 1682, 1802, 2045
HpyF3I	CTNAG	6 cut(s)	162, 969, 1171, 1208, 1276, 1398
HpySE526I	ACGT	4 cut(s)	672, 853, 882, 1063
Hsp92II	CATG	6 cut(s)	415, 637, 730, 1661, 1747, 2090
KpnI	GGTACC	1 cut(s)	777
LguI	GCTCTTC	2 cut(s)	109, 2166
LmnI	GCTCC	7 cut(s)	86, 583, 1573, 1653, 1959, 2142, 2185
Lsp1109I	GCAGC	4 cut(s)	60, 131, 134, 1552
LweI	GCATC	5 cut(s)	76, 1644, 1704, 1914, 2146
MaeI	CTAG	4 cut(s)	33, 716, 890, 1898
MaeII	ACGT	4 cut(s)	672, 853, 882, 1063
MaeIII	GTNAC	8 cut(s)	323, 904, 1193, 1525, 1632, 1879, 1900, 1931
MbiI	CCGCTC	1 cut(s)	81
MboII	GAAGA	8 cut(s)	96, 689, 746, 1012, 1127, 1768, 2153, 2156
MfeI	CAATTG	1 cut(s)	350
MflI	RGATCY	3 cut(s)	1773, 1822, 2056
MhlI	GDGCHC	2 cut(s)	244, 1307
MlsI	TGGCCA	1 cut(s)	1503
MluNI	TGGCCA	1 cut(s)	1503
MlyI	GAGTC	5 cut(s)	358, 383, 600, 903, 2072
MmeI	TCCRAC	1 cut(s)	837
Mox20I	TGGCCA	1 cut(s)	1503
Mph1103I	ATGCAT	1 cut(s)	1659
MroXI	GAANNNNTTC	1 cut(s)	1605
MscI	TGGCCA	1 cut(s)	1503
MseI	TTAA	5 cut(s)	18, 1016, 1694, 1791, 1943
Msp20I	TGGCCA	1 cut(s)	1503
MspA1I	CMGCKG	1 cut(s)	51
MspR9I	CCNGG	4 cut(s)	64, 301, 746, 2033
MunI	CAATTG	1 cut(s)	350
MvaI	CCWGG	4 cut(s)	64, 301, 746, 2033
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	8 cut(s)	51, 845, 958, 1654, 1663, 1682, 1802, 2045
NdeI	CATATG	4 cut(s)	439, 491, 769, 2172
NheI	GCTAGC	1 cut(s)	715
NlaIII	CATG	6 cut(s)	415, 637, 730, 1661, 1747, 2090
NmeAIII	GCCGAG	1 cut(s)	324
NmuCI	GTSAC	5 cut(s)	323, 904, 1525, 1879, 1900
NsiI	ATGCAT	1 cut(s)	1659
NspI	RCATGY	2 cut(s)	637, 1661
PaeI	GCATGC	1 cut(s)	637
PaeR7I	CTCGAG	1 cut(s)	2060
PagI	TCATGA	1 cut(s)	1743
PciSI	GCTCTTC	2 cut(s)	109, 2166
PdmI	GAANNNNTTC	1 cut(s)	1605
PfeI	GAWTC	5 cut(s)	225, 265, 557, 1212, 1606
PflMI	CCANNNNNTGG	1 cut(s)	1724
PfoI	TCCNGGA	1 cut(s)	2031
PkrI	GCNGC	7 cut(s)	47, 50, 53, 80, 121, 124, 1567
Ple19I	CGATCG	1 cut(s)	629
PleI	GAGTC	5 cut(s)	358, 382, 599, 902, 2071
PpsI	GAGTC	5 cut(s)	358, 382, 599, 902, 2071
Ppu21I	YACGTR	1 cut(s)	883
PpuMI	RGGWCCY	1 cut(s)	7
PsiI	TTATAA	1 cut(s)	1991
Psp5II	RGGWCCY	1 cut(s)	7
Psp6I	CCWGG	4 cut(s)	62, 299, 744, 2031
PspGI	CCWGG	4 cut(s)	62, 299, 744, 2031
PspOMI	GGGCCC	2 cut(s)	240, 1303
PspPI	GGNCC	9 cut(s)	7, 66, 240, 241, 976, 1051, 1303, 1304, 1728
PspPPI	RGGWCCY	1 cut(s)	7
PstI	CTGCAG	1 cut(s)	2071
PsuI	RGATCY	3 cut(s)	1773, 1822, 2056
PvuI	CGATCG	1 cut(s)	629
RsaI	GTAC	6 cut(s)	408, 775, 881, 1446, 1759, 1770
RsaNI	GTAC	6 cut(s)	407, 774, 880, 1445, 1758, 1769
SalI	GTCGAC	1 cut(s)	131
SapI	GCTCTTC	2 cut(s)	109, 2166
SaqAI	TTAA	5 cut(s)	18, 1016, 1694, 1791, 1943
SatI	GCNGC	7 cut(s)	46, 49, 52, 79, 120, 123, 1566
Sau96I	GGNCC	9 cut(s)	7, 66, 240, 241, 976, 1051, 1303, 1304, 1728
SchI	GAGTC	5 cut(s)	358, 383, 600, 903, 2072
ScrFI	CCNGG	4 cut(s)	64, 301, 746, 2033
SduI	GDGCHC	2 cut(s)	244, 1307
SfaNI	GCATC	5 cut(s)	76, 1644, 1704, 1914, 2146
SfcI	CTRYAG	2 cut(s)	369, 2067
Sfr274I	CTCGAG	1 cut(s)	2060
SinI	GGWCC	4 cut(s)	7, 976, 1051, 1728
SlaI	CTCGAG	1 cut(s)	2060
SmlI	CTYRAG	2 cut(s)	278, 2060
SmoI	CTYRAG	2 cut(s)	278, 2060
SpeI	ACTAGT	2 cut(s)	32, 1897
SphI	GCATGC	1 cut(s)	637
SsiI	CCGC	6 cut(s)	45, 51, 79, 140, 1782, 2183
SspMI	CTAG	4 cut(s)	33, 716, 890, 1898
StyD4I	CCNGG	4 cut(s)	62, 299, 744, 2031
StyI	CCWWGG	1 cut(s)	1429
TaaI	ACNGT	2 cut(s)	1151, 1996
TaiI	ACGT	4 cut(s)	675, 856, 885, 1066
TaqI	TCGA	4 cut(s)	132, 1672, 2061, 2119
TatI	WGTACW	3 cut(s)	406, 1444, 1768
TauI	GCSGC	3 cut(s)	48, 54, 81
TfiI	GAWTC	5 cut(s)	225, 265, 557, 1212, 1606
Tru1I	TTAA	5 cut(s)	18, 1016, 1694, 1791, 1943
Tru9I	TTAA	5 cut(s)	18, 1016, 1694, 1791, 1943
TscAI	CASTG	6 cut(s)	328, 405, 1061, 1156, 1189, 2215
TseFI	GTSAC	5 cut(s)	323, 904, 1525, 1879, 1900
TseI	GCWGC	4 cut(s)	48, 119, 122, 1565
Tsp45I	GTSAC	5 cut(s)	323, 904, 1525, 1879, 1900
TspGWI	ACGGA	5 cut(s)	36, 440, 1611, 2113, 2155
TspRI	CASTG	6 cut(s)	328, 405, 1061, 1156, 1189, 2215
Van91I	CCANNNNNTGG	1 cut(s)	1724
VpaK11BI	GGWCC	4 cut(s)	7, 976, 1051, 1728
XapI	RAATTY	6 cut(s)	910, 1118, 1178, 1310, 2011, 2073
XceI	RCATGY	2 cut(s)	637, 1661
XhoI	CTCGAG	1 cut(s)	2060
XmiI	GTMKAC	2 cut(s)	132, 305
XmnI	GAANNNNTTC	1 cut(s)	1605
XspI	CTAG	4 cut(s)	33, 716, 890, 1898
Zsp2I	ATGCAT	1 cut(s)	1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.