MD09G1268900.v1.1

Belongs to the complex I 75 kDa subunit family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0011004
Physical Location & Seq
Forward (+)
34332478 .. 34338740
6263 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1268900.v1.1.491

Sequence Viewer

Length: 2250 bp
ATGGGGTTGGGATCGCTTGCTTCGAGGGCCCTGAAGCCCACAGCGTCAAGGCTCCTCAGCTCTCAGAACCCTAGACCCTTCTTCTCCTTCCACAGGGCGGTCTCAACCACGCCGGAGCTCCAGAACGCCGACCAATCAGCGGCGGCGGCCCAGCCCGACCCCCCGGCGGATCTCCCTCCTCGGACCCCTGTGGGCGGGGCCCGTGTCCACTTCCCGAATCCCGAAGATGCCATCGAGGTCTTTGTCGATGGATACCCCGTCAAAATCCCCAAGGGATTTACTGTGTTGCAGGCCTGTGAGGTCGCCGGCGTTGACATCCCTAGATTCTGCTACCATAGCCGGTTGTCGATCGCCGGTAACTGCCGTATGTGCCTTGTTGAGGTTGAGAAGTCGCCGAAGCCCGTCGCCTCCTGTGCCATGCCTGCCATGCCTGGCATGAAAATTAAGACCGATACACCAATAGCAAAGAAGGCTCGAGAAGGGGTGATGGAGTTTCTGCTGATGAATCATCCCTTGGATTGTCCAATTTGCGATCAGGGAGGAGAATGTGATCTGCAGGATCAGTCTATGGCATTTGGATCTGATCGCGGCCGTTTTACTGAGGTGAAGAGATCCGTAGTTGATAAGAATCTTGGTCCTTTGGTGAAGACTGTAATGACTCGGTGTATTCAATGTACAAGGTGTGTCAGATTTGCAACTGAGGTTGCGGGGGTTCAGGACCTTGGCATGTTAGGTCGTGGCAGCGGAGAGGAAATTGGGACTTATGTCGAAAAACTTATGACAAGTGAGCTTTCCGGAAATGTGATAGATATCTGTCCAGTGGGAGCCCTAACCTCAAAACCGTTTGCGTTTAAAGCTCGAAATTGGGAATTAAAGGGAACAGAGACCATTGATGTTACTGATGCTGTTGGATCCAACATTCGAATTGATAGCCGAGGTCCAGAGGTCTTGCGCATCGTCCCACGATTAAATGAGGACATAAATGAAGAATGGATATCAGACAAGACTCGTTTCTGTTATGATGGTCTGAAGAGGCAGAGGTTAAATGACCCTATGATTCGTGGTGCTGATGGGCGCTTTAAGCCTGTGAGCTGGCGGGATGCCCTCGCTGTAGTTGCCGAGATGGCTCATCAAGTTAAACCAGAGGAGATTGTTGGGGTTGCTGGCCAGCTATCTGATGCTGAGTCCATGATGGCACTGAAAGACTTCTTAAATAAAATGGGGTCAAACAATGTCTGGTGTGAAGCAAATGGTTCAAACTGTGACGCTGATCTTCGATCTGGATATATTCTGAATACTAGCATTGCTGGTCTGGAGAAAGCAGATGCTTTTCTGTTGGTTGGTACCCAGCCAAGGGTAGAAGCTGCTATCGTAAATGCTAGAATCCGGAAGACGGTGCAAGCTACCCACGCCAAGGTTGGGTATGTTGGCCCTCCAGCTGATTTCAACTATGATCACGAGCATCTTGGCACAGGCCCTCAGACACTTCTAGAAATTGCGGAGCGTCGTCACCCATTTTCCTCAGTCCTCGCAAATGCCAAAAACCCTGCTATCATTGTCGGTGCTGGGGTCTTTGAGAGGAAAGACAAGGATGCAATTTTTTCTGCTGTTGAAGCCATTGGAAAATACGCTAATGTTGTAAGGCCTGATTGGAATGGATTCAATGTACTGCTTCTCAAAGCCGCCCAGGCTGCAGCACTTGACCTTGGACTTGTGCCAGAATCTGGAAACAGCATCGAGTCTGCAAAGTTTGTTTACCTGATGGGCGCTGATGATGTCAGCTTGGAGAAGGTTCCAAGTGATGCATTTGTGGTTTATCAAGGGCATCATGGGGACCGGGGTGTGTATCGTGCTAATGTCATCCTTCCTGCGGCAGCATTCAGTGAAAAGGAAGGGACATATGTAAACACTGAAGGGTGCTCTCAGCAAACAGTACCTGCAGTTCCGACTGTCGGTGATGCCAGGGATGACTGGAAGATTATTCGGGCTCTATCTGAGGTGGCAGGTGTACGGCTGCCATATGATACACTTGGGGCCATCCGATCCCGGATTAGGACAGTGGCACCAAACATTTTGCAAGTAGACGAGAGAGAGCCAGCTACCTTTCCATCATCGATTAAACCTGAGTCCACTCAAAAGGTGGATTCGACCCCATTTGGGACTGCTATCGAGAATTTCTATATGACTGATTCGATCACAAGGGCTTCAAAGATAATGGCACAATGCAGTTCATTGCTCCTGAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko04723 ko04932 ko05010 ko05012 ko05016 map00190 map01100 map04714 map04723 map04932 map05010 map05012 map05016
Pfam Domains
Protein Families
Fer2_4 Molybdopterin NADH-G_4Fe-4S_3 NADH_dhqG_C

Protein Analysis

750

Amino Acids

81.24

Weight (kDa)

6.21

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fer2_4 PF13510 76 - 152 2.3e-19 2Fe-2S iron-sulfur cluster binding domain
Fer2 PF00111 81 - 130 1.6e-06 2Fe-2S iron-sulfur cluster binding domain
NADH-G_4Fe-4S_3 PF10588 159 - 196 1.4e-16 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Fer4_Nqo3 PF22117 212 - 278 4.8e-33 NADH-quinone oxidoreductase subunit 3, ferredoxin-like domain
Fer4_NDSU1 PF22151 291 - 341 1.6e-29 NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain
Molybdopterin PF00384 347 - 667 1.8e-107 Molybdopterin oxidoreductase
NADH_dhqG_C PF09326 707 - 742 4e-13 NADH-ubiquinone oxidoreductase subunit G, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37510 AT5G37510
fragaria_vesca FvH4_1g30070
malus_domestica MD09G1268900.v1.1 MD17G1267300.v1.1
prunus_persica Prupe.3G165400_v2.0.a1
pyrus_communis pycom09g18080 pycom17g26640
rosa_chinensis RchiOBHm_Chr3g0491991
rosa_laevigata RLG00000022799 RLG00000022807
rosa_multiflora Rmu_sc0005238.1_g000005 Rmu_sc0036946.1_g000001
rosa_roxburghii Rroxscaffold_6G00392660
rosa_rugosa Rorug03G0251000
rosa_samantha Rh3AG301000 Rh3BG337200 Rh3CG334300 Rh3DG336600
rosa_wichuraiana Rw3G026610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1994
Acc16I TGCGCA 1 cut(s) 953
Acc36I ACCTGC 2 cut(s) 1945, 1994
Acc65I GGTACC 1 cut(s) 1343
AccB1I GGYRCC 2 cut(s) 1343, 2062
AccB7I CCANNNNNTGG 1 cut(s) 1724
AccI GTMKAC 1 cut(s) 2082
AccII CGCG 1 cut(s) 588
AccIII TCCGGA 2 cut(s) 794, 1386
AclWI GGATC 8 cut(s) 19, 177, 567, 586, 606, 906, 919, 2037
AcoI YGGCCR 2 cut(s) 589, 1165
AcsI RAATTY 1 cut(s) 2173
AcuI CTGAAG 3 cut(s) 53, 1049, 1932
AfaI GTAC 5 cut(s) 676, 1345, 1668, 1935, 2010
AgsI TTSAA 6 cut(s) 671, 1257, 1447, 1613, 1663, 2208
AjnI CCWGG 3 cut(s) 430, 1686, 1961
AjuI GAANNNNNNNTTGG 2 cut(s) 497, 529
Alw21I GWGCWC 2 cut(s) 120, 1922
Alw26I GTCTC 2 cut(s) 106, 878
AlwI GGATC 8 cut(s) 19, 177, 567, 586, 606, 906, 919, 2037
AlwNI CAGNNNCTG 2 cut(s) 1724, 1937
Ama87I CYCGRG 1 cut(s) 474
Aor13HI TCCGGA 2 cut(s) 794, 1386
ApaI GGGCCC 2 cut(s) 31, 202
ApeKI GCWGC 6 cut(s) 741, 1364, 1691, 1694, 1874, 2014
ApoI RAATTY 1 cut(s) 2173
Asp700I GAANNNNTTC 2 cut(s) 1205, 1658
Asp718I GGTACC 1 cut(s) 1343
AspLEI GCGC 3 cut(s) 954, 1077, 1769
AsuC2I CCSGG 3 cut(s) 164, 1838, 2047
AsuHPI GGTGA 5 cut(s) 496, 616, 655, 1502, 1967
AsuII TTCGAA 1 cut(s) 922
AvaI CYCGRG 1 cut(s) 474
AvaII GGWCC 5 cut(s) 183, 635, 718, 938, 1834
BaeGI GKGCMC 2 cut(s) 31, 202
BalI TGGCCA 1 cut(s) 1167
BamHI GGATCC 1 cut(s) 911
BanI GGYRCC 2 cut(s) 1343, 2062
BanII GRGCYC 5 cut(s) 31, 120, 202, 829, 1990
BauI CACGAG 1 cut(s) 1457
BbsI GAAGAC 2 cut(s) 653, 1397
Bbv12I GWGCWC 2 cut(s) 120, 1922
BbvCI CCTCAGC 1 cut(s) 56
BbvI GCAGC 6 cut(s) 753, 1351, 1678, 1706, 1886, 2001
BceAI ACGGC 3 cut(s) 348, 576, 2027
BciT130I CCWGG 3 cut(s) 432, 1688, 1963
BciVI GTATCC 1 cut(s) 245
BclI TGATCA 1 cut(s) 1453
BcnI CCSGG 3 cut(s) 164, 1838, 2047
BcoDI GTCTC 2 cut(s) 106, 878
BfaI CTAG 5 cut(s) 72, 321, 1299, 1380, 1490
BfmI CTRYAG 4 cut(s) 554, 1110, 1692, 1938
BfoI RGCGCY 2 cut(s) 1078, 1770
BfuAI ACCTGC 2 cut(s) 1945, 1994
BfuI GTATCC 1 cut(s) 245
BglI GCCNNNNNGGC 2 cut(s) 1124, 1688
Bme1390I CCNGG 6 cut(s) 164, 432, 1688, 1838, 1963, 2047
Bme18I GGWCC 5 cut(s) 183, 635, 718, 938, 1834
BmeT110I CYCGRG 1 cut(s) 474
BmrFI CCNGG 6 cut(s) 164, 432, 1688, 1838, 1963, 2047
BoxI GACNNNNGTC 1 cut(s) 764
BpiI GAAGAC 2 cut(s) 653, 1397
BpmI CTGGAG 3 cut(s) 104, 1334, 1419
Bpu10I CCTNAGC 1 cut(s) 56
Bpu14I TTCGAA 1 cut(s) 922
BpuMI CCSGG 3 cut(s) 164, 1838, 2047
Bsa29I ATCGAT 1 cut(s) 2114
BsaBI GATNNNNATC 2 cut(s) 627, 809
BsaI GGTCTC 2 cut(s) 106, 878
BsaWI WCCGGW 2 cut(s) 794, 1386
Bse118I RCCGGY 3 cut(s) 305, 339, 353
Bse1I ACTGG 2 cut(s) 818, 1976
Bse3DI GCAATG 2 cut(s) 1302, 2231
Bse8I GATNNNNATC 2 cut(s) 627, 809
BseAI TCCGGA 2 cut(s) 794, 1386
BseBI CCWGG 3 cut(s) 432, 1688, 1963
BseCI ATCGAT 1 cut(s) 2114
BseGI GGATG 7 cut(s) 315, 508, 1105, 1597, 1860, 1972, 2037
BseJI GATNNNNATC 2 cut(s) 627, 809
BseMI GCAATG 2 cut(s) 1302, 2231
BseNI ACTGG 2 cut(s) 818, 1976
BseRI GAGGAG 4 cut(s) 44, 168, 555, 1160
BseSI GKGCMC 2 cut(s) 31, 202
BseX3I CGGCCG 1 cut(s) 589
BseXI GCAGC 6 cut(s) 753, 1351, 1678, 1706, 1886, 2001
BseYI CCCAGC 3 cut(s) 150, 1347, 1565
Bsh1236I CGCG 1 cut(s) 588
Bsh1285I CGRYCG 2 cut(s) 351, 592
BshNI GGYRCC 2 cut(s) 1343, 2062
BshVI ATCGAT 1 cut(s) 2114
BsiEI CGRYCG 2 cut(s) 351, 592
BsiHKAI GWGCWC 2 cut(s) 120, 1922
BsiHKCI CYCGRG 1 cut(s) 474
BsiSI CCGG 9 cut(s) 113, 164, 306, 340, 354, 795, 1387, 1837, 2047
BslFI GGGAC 5 cut(s) 772, 944, 1847, 1909, 2173
BsmAI GTCTC 2 cut(s) 106, 878
BsmFI GGGAC 5 cut(s) 772, 944, 1847, 1909, 2173
BsmI GAATGC 1 cut(s) 1877
Bso31I GGTCTC 2 cut(s) 106, 878
BsoBI CYCGRG 1 cut(s) 474
Bsp119I TTCGAA 1 cut(s) 922
Bsp120I GGGCCC 2 cut(s) 27, 198
Bsp1286I GDGCHC 6 cut(s) 31, 120, 202, 829, 1922, 1990
Bsp13I TCCGGA 2 cut(s) 794, 1386
Bsp1407I TGTACA 1 cut(s) 674
BspDI ATCGAT 1 cut(s) 2114
BspEI TCCGGA 2 cut(s) 794, 1386
BspFNI CGCG 1 cut(s) 588
BspMAI CTGCAG 3 cut(s) 558, 1696, 1942
BspMI ACCTGC 2 cut(s) 1945, 1994
BspPI GGATC 8 cut(s) 19, 177, 567, 586, 606, 906, 919, 2037
BspT104I TTCGAA 1 cut(s) 922
BspT107I GGYRCC 2 cut(s) 1343, 2062
BspTNI GGTCTC 2 cut(s) 106, 878
BsrDI GCAATG 2 cut(s) 1302, 2231
BsrFI RCCGGY 3 cut(s) 305, 339, 353
BsrGI TGTACA 1 cut(s) 674
BsrI ACTGG 2 cut(s) 818, 1976
BssAI RCCGGY 3 cut(s) 305, 339, 353
BssSI CACGAG 1 cut(s) 1457
BssT1I CCWWGG 6 cut(s) 270, 513, 721, 1352, 1413, 1705
Bst2BI CACGAG 1 cut(s) 1457
Bst2UI CCWGG 3 cut(s) 432, 1688, 1963
Bst4CI ACNGT 8 cut(s) 283, 652, 843, 1262, 1396, 1933, 1951, 2059
Bst6I CTCTTC 2 cut(s) 602, 1025
BstAUI TGTACA 1 cut(s) 674
BstBI TTCGAA 1 cut(s) 922
BstC8I GCNNGC 9 cut(s) 18, 291, 307, 423, 1094, 1165, 1169, 1401, 2097
BstENI CCTNNNNNAGG 2 cut(s) 91, 377
BstF5I GGATG 7 cut(s) 315, 508, 1105, 1597, 1860, 1972, 2037
BstFNI CGCG 1 cut(s) 588
BstH2I RGCGCY 2 cut(s) 1078, 1770
BstHHI GCGC 3 cut(s) 954, 1077, 1769
BstMAI GTCTC 2 cut(s) 106, 878
BstMCI CGRYCG 2 cut(s) 351, 592
BstNI CCWGG 3 cut(s) 432, 1688, 1963
BstNSI RCATGY 1 cut(s) 730
BstPAI GACNNNNGTC 1 cut(s) 764
BstSCI CCNGG 6 cut(s) 162, 430, 1686, 1836, 1961, 2045
BstSFI CTRYAG 4 cut(s) 554, 1110, 1692, 1938
BstSLI GKGCMC 2 cut(s) 31, 202
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 6 cut(s) 753, 1351, 1678, 1706, 1886, 2001
BstV2I GAAGAC 2 cut(s) 653, 1397
BstX2I RGATCY 4 cut(s) 169, 578, 611, 911
BstYI RGATCY 4 cut(s) 169, 578, 611, 911
BstZI CGGCCG 1 cut(s) 589
Bsu15I ATCGAT 1 cut(s) 2114
BsuI GTATCC 1 cut(s) 245
BsuTUI ATCGAT 1 cut(s) 2114
BtsCI GGATG 7 cut(s) 315, 508, 1105, 1597, 1860, 1972, 2037
BtsIMutI CAGTG 5 cut(s) 825, 1196, 1888, 1908, 2064
BveI ACCTGC 2 cut(s) 1945, 1994
Cac8I GCNNGC 9 cut(s) 18, 291, 307, 423, 1094, 1165, 1169, 1401, 2097
CaiI CAGNNNCTG 2 cut(s) 1724, 1937
CfoI GCGC 3 cut(s) 954, 1077, 1769
Cfr10I RCCGGY 3 cut(s) 305, 339, 353
ClaI ATCGAT 1 cut(s) 2114
CseI GACGC 3 cut(s) 33, 1274, 1493
Csp6I GTAC 5 cut(s) 675, 1344, 1667, 1934, 2009
CviAII CATG 6 cut(s) 418, 427, 436, 727, 1189, 1829
CviQI GTAC 5 cut(s) 675, 1344, 1667, 1934, 2009
DraI TTTAAA 1 cut(s) 853
EaeI YGGCCR 2 cut(s) 589, 1165
EagI CGGCCG 1 cut(s) 589
Eam1104I CTCTTC 2 cut(s) 602, 1025
EarI CTCTTC 2 cut(s) 602, 1025
EciI GGCGGA 1 cut(s) 182
Ecl136II GAGCTC 1 cut(s) 118
EclXI CGGCCG 1 cut(s) 589
Eco130I CCWWGG 6 cut(s) 270, 513, 721, 1352, 1413, 1705
Eco147I AGGCCT 2 cut(s) 293, 1645
Eco24I GRGCYC 5 cut(s) 31, 120, 202, 829, 1990
Eco31I GGTCTC 2 cut(s) 106, 878
Eco32I GATATC 2 cut(s) 811, 996
Eco47I GGWCC 5 cut(s) 183, 635, 718, 938, 1834
Eco52I CGGCCG 1 cut(s) 589
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 3 cut(s) 53, 1049, 1932
Eco88I CYCGRG 1 cut(s) 474
EcoICRI GAGCTC 1 cut(s) 118
EcoNI CCTNNNNNAGG 2 cut(s) 91, 377
EcoO109I RGGNCCY 5 cut(s) 27, 28, 198, 718, 1475
EcoRII CCWGG 3 cut(s) 430, 1686, 1961
EcoRV GATATC 2 cut(s) 811, 996
EcoT14I CCWWGG 6 cut(s) 270, 513, 721, 1352, 1413, 1705
EcoT22I ATGCAT 1 cut(s) 1807
EcoT38I GRGCYC 5 cut(s) 31, 120, 202, 829, 1990
ErhI CCWWGG 6 cut(s) 270, 513, 721, 1352, 1413, 1705
FaeI CATG 6 cut(s) 421, 430, 439, 730, 1192, 1832
FaqI GGGAC 5 cut(s) 772, 944, 1847, 1909, 2173
FatI CATG 6 cut(s) 417, 426, 435, 726, 1188, 1828
FauI CCCGC 3 cut(s) 188, 700, 1089
FauNDI CATATG 2 cut(s) 1900, 2020
FbaI TGATCA 1 cut(s) 1453
FblI GTMKAC 1 cut(s) 2082
FokI GGATG 7 cut(s) 302, 495, 1112, 1604, 1847, 1979, 2024
FriOI GRGCYC 5 cut(s) 31, 120, 202, 829, 1990
FspBI CTAG 5 cut(s) 72, 321, 1299, 1380, 1490
FspI TGCGCA 1 cut(s) 953
GlaI GCGC 3 cut(s) 953, 1076, 1768
GsaI CCCAGC 3 cut(s) 154, 1351, 1569
GsuI CTGGAG 3 cut(s) 104, 1334, 1419
HaeII RGCGCY 2 cut(s) 1078, 1770
HapII CCGG 9 cut(s) 113, 164, 306, 340, 354, 795, 1387, 1837, 2047
HgaI GACGC 3 cut(s) 33, 1274, 1493
HhaI GCGC 3 cut(s) 954, 1077, 1769
Hin1II CATG 6 cut(s) 421, 430, 439, 730, 1192, 1832
Hin6I GCGC 3 cut(s) 952, 1075, 1767
HinP1I GCGC 3 cut(s) 952, 1075, 1767
HincII GTYRAC 1 cut(s) 313
HindII GTYRAC 1 cut(s) 313
HpaII CCGG 9 cut(s) 113, 164, 306, 340, 354, 795, 1387, 1837, 2047
HphI GGTGA 5 cut(s) 496, 616, 655, 1502, 1967
Hpy166II GTNNAC 7 cut(s) 208, 313, 1756, 1906, 2009, 2083, 2130
Hpy8I GTNNAC 7 cut(s) 208, 313, 1756, 1906, 2009, 2083, 2130
Hpy99I CGWCG 2 cut(s) 407, 1509
HpyAV CCTTC 8 cut(s) 88, 97, 463, 473, 1783, 1874, 1886, 1907
HpyCH4III ACNGT 8 cut(s) 283, 652, 843, 1262, 1396, 1933, 1951, 2059
Hsp92II CATG 6 cut(s) 421, 430, 439, 730, 1192, 1832
HspAI GCGC 3 cut(s) 952, 1075, 1767
Kpn2I TCCGGA 2 cut(s) 794, 1386
KpnI GGTACC 1 cut(s) 1347
KroI GCCGGC 1 cut(s) 305
KroNI GCCGGC 1 cut(s) 307
Ksp22I TGATCA 1 cut(s) 1453
LmnI GCTCC 6 cut(s) 57, 115, 123, 824, 1501, 2241
Lsp1109I GCAGC 6 cut(s) 753, 1351, 1678, 1706, 1886, 2001
MaeI CTAG 5 cut(s) 72, 321, 1299, 1380, 1490
MaeIII GTNAC 4 cut(s) 356, 895, 1262, 1508
MboII GAAGA 9 cut(s) 73, 236, 619, 658, 998, 1042, 1265, 1402, 1987
MflI RGATCY 4 cut(s) 169, 578, 611, 911
MhlI GDGCHC 6 cut(s) 31, 120, 202, 829, 1922, 1990
MlsI TGGCCA 1 cut(s) 1167
MluCI AATT 9 cut(s) 441, 525, 753, 862, 869, 924, 1494, 1596, 2173
MluNI TGGCCA 1 cut(s) 1167
MlyI GAGTC 5 cut(s) 652, 1000, 1193, 1748, 2135
MmeI TCCRAC 3 cut(s) 889, 939, 1970
Mox20I TGGCCA 1 cut(s) 1167
Mph1103I ATGCAT 1 cut(s) 1807
MreI CGCCGGCG 1 cut(s) 305
MroI TCCGGA 2 cut(s) 794, 1386
MroNI GCCGGC 1 cut(s) 305
MroXI GAANNNNTTC 2 cut(s) 1205, 1658
MscI TGGCCA 1 cut(s) 1167
MseI TTAA 9 cut(s) 444, 852, 872, 968, 1043, 1080, 1137, 1211, 2118
Msp20I TGGCCA 1 cut(s) 1167
MspA1I CMGCKG 3 cut(s) 140, 744, 1439
MspI CCGG 9 cut(s) 113, 164, 306, 340, 354, 795, 1387, 1837, 2047
MspR9I CCNGG 6 cut(s) 164, 432, 1688, 1838, 1963, 2047
Mva1269I GAATGC 1 cut(s) 1877
MvaI CCWGG 3 cut(s) 432, 1688, 1963
MvnI CGCG 1 cut(s) 588
NaeI GCCGGC 1 cut(s) 307
NciI CCSGG 3 cut(s) 164, 1838, 2047
NdeI CATATG 2 cut(s) 1900, 2020
NgoMIV GCCGGC 1 cut(s) 305
NlaIII CATG 6 cut(s) 421, 430, 439, 730, 1192, 1832
NmeAIII GCCGAG 2 cut(s) 959, 1144
NmuCI GTSAC 2 cut(s) 1262, 1508
NsbI TGCGCA 1 cut(s) 953
NsiI ATGCAT 1 cut(s) 1807
NspI RCATGY 1 cut(s) 730
NspV TTCGAA 1 cut(s) 922
PaeR7I CTCGAG 1 cut(s) 474
PaqCI CACCTGC 1 cut(s) 1994
PceI AGGCCT 2 cut(s) 293, 1645
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1877
PdiI GCCGGC 1 cut(s) 307
PdmI GAANNNNTTC 2 cut(s) 1205, 1658
PflMI CCANNNNNTGG 1 cut(s) 1724
PfoI TCCNGGA 1 cut(s) 2045
Ple19I CGATCG 1 cut(s) 351
PleI GAGTC 5 cut(s) 652, 1000, 1192, 1747, 2134
PpsI GAGTC 5 cut(s) 652, 1000, 1192, 1747, 2134
PpuMI RGGWCCY 1 cut(s) 718
PshAI GACNNNNGTC 1 cut(s) 764
Psp124BI GAGCTC 1 cut(s) 120
Psp5II RGGWCCY 1 cut(s) 718
Psp6I CCWGG 3 cut(s) 430, 1686, 1961
PspFI CCCAGC 3 cut(s) 150, 1347, 1565
PspGI CCWGG 3 cut(s) 430, 1686, 1961
PspOMI GGGCCC 2 cut(s) 27, 198
PspPPI RGGWCCY 1 cut(s) 718
PsrI GAACNNNNNNTAC 2 cut(s) 1926, 1958
PstI CTGCAG 3 cut(s) 558, 1696, 1942
PstNI CAGNNNCTG 2 cut(s) 1724, 1937
PsuI RGATCY 4 cut(s) 169, 578, 611, 911
PvuI CGATCG 1 cut(s) 351
PvuII CAGCTG 1 cut(s) 1439
RsaI GTAC 5 cut(s) 676, 1345, 1668, 1935, 2010
RsaNI GTAC 5 cut(s) 675, 1344, 1667, 1934, 2009
SacI GAGCTC 1 cut(s) 120
SaqAI TTAA 9 cut(s) 444, 852, 872, 968, 1043, 1080, 1137, 1211, 2118
SchI GAGTC 5 cut(s) 652, 1000, 1193, 1748, 2135
ScrFI CCNGG 6 cut(s) 164, 432, 1688, 1838, 1963, 2047
SduI GDGCHC 6 cut(s) 31, 120, 202, 829, 1922, 1990
SfcI CTRYAG 4 cut(s) 554, 1110, 1692, 1938
Sfr274I CTCGAG 1 cut(s) 474
SfuI TTCGAA 1 cut(s) 922
SgrAI CRCCGGYG 1 cut(s) 305
SinI GGWCC 5 cut(s) 183, 635, 718, 938, 1834
SlaI CTCGAG 1 cut(s) 474
SmlI CTYRAG 1 cut(s) 474
SmoI CTYRAG 1 cut(s) 474
Sse9I AATT 9 cut(s) 441, 525, 753, 862, 869, 924, 1494, 1596, 2173
SseBI AGGCCT 2 cut(s) 293, 1645
SspMI CTAG 5 cut(s) 72, 321, 1299, 1380, 1490
SstI GAGCTC 1 cut(s) 120
StuI AGGCCT 2 cut(s) 293, 1645
StyD4I CCNGG 6 cut(s) 162, 430, 1686, 1836, 1961, 2045
StyI CCWWGG 6 cut(s) 270, 513, 721, 1352, 1413, 1705
TaaI ACNGT 8 cut(s) 283, 652, 843, 1262, 1396, 1933, 1951, 2059
TaqII GACCGA 1 cut(s) 464
TasI AATT 9 cut(s) 441, 525, 753, 862, 869, 924, 1494, 1596, 2173
TatI WGTACW 2 cut(s) 674, 1666
TauI GCSGC 6 cut(s) 143, 146, 149, 591, 1685, 1874
Tru1I TTAA 9 cut(s) 444, 852, 872, 968, 1043, 1080, 1137, 1211, 2118
Tru9I TTAA 9 cut(s) 444, 852, 872, 968, 1043, 1080, 1137, 1211, 2118
TscAI CASTG 5 cut(s) 825, 1203, 1888, 1915, 2064
TseFI GTSAC 2 cut(s) 1262, 1508
TseI GCWGC 6 cut(s) 741, 1364, 1691, 1694, 1874, 2014
Tsp45I GTSAC 2 cut(s) 1262, 1508
TspDTI ATGAA 4 cut(s) 452, 518, 999, 2220
TspGWI ACGGA 1 cut(s) 604
TspRI CASTG 5 cut(s) 825, 1203, 1888, 1915, 2064
Van91I CCANNNNNTGG 1 cut(s) 1724
VpaK11BI GGWCC 5 cut(s) 183, 635, 718, 938, 1834
XagI CCTNNNNNAGG 2 cut(s) 91, 377
XapI RAATTY 1 cut(s) 2173
XbaI TCTAGA 1 cut(s) 1489
XceI RCATGY 1 cut(s) 730
XcmI CCANNNNNNNNNTGG 2 cut(s) 1415, 2137
XhoI CTCGAG 1 cut(s) 474
XmiI GTMKAC 1 cut(s) 2082
XmnI GAANNNNTTC 2 cut(s) 1205, 1658
XspI CTAG 5 cut(s) 72, 321, 1299, 1380, 1490
Zsp2I ATGCAT 1 cut(s) 1807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.