Rw3G026610

Belongs to the complex I 75 kDa subunit family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0011004
Physical Location & Seq
Reverse (-)
36631276 .. 36638350
7075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G026610.1

Sequence Viewer

Length: 2235 bp
ATGGGGTTGGGATCGCTTGCTTCCAGGGCCCTAAGGCCTAGGGCCGCAAGGCTCCTCCTCGGCTCCCAAAACCCCGGACCCTTCTTCTCCTTCCAGAGAACCATGGTCACATCCACCCCGGAGCTCAAGAATCCGGAGCCGTCCACGGCCGCCCAGCCCGAGCCCCCCGCAGCCGACCTTCCGCCCCGGACCGCGGTCGGTGGGGCCCGAATCCACTTCGCGAACCCGGACGACGCGATCGAGGTGTTCGTGGACGGATACCCTGTGAAAATCCCTAAGGGCATGTCCGTGTTGCAAGCGTGTGAGGTCGCCGGTGTTGACATCCCTAGGTTTTGCTACCACAGCAGATTGTCCATTGCCGGTAATTGCCGTATGTGTCTCGTCGAGGTTGAGAAGTCACCCAAGCCCGTCGCCTCTTGCGCCATGCCTGCTATGCCTGGTATGAAAATTAAGACTGACACTCCAATAGCCAAGAAGGCTCGCGAAGGGGTGATGGAGTTTCTGTTGATGAATCATCCTTTGGATTGTCCAATTTGTGATCAGGGTGGAGAATGTGATCTCCAGGATCAGTCTATGGCATTTGGATCTGATCGTGGCCGATTCACTGAAATGAAGAGATCAGTTGTGGACAAGAATCTTGGTCCTTTGGTCAAGACTGTCATGACTCGCTGTATTCAATGTACACGGTGCGTTAGGTTTGCAACAGAGGTCGCTGGGGTTCAGGACCTTGGAATGTTAGGCCGTGGAAGTGGAGAGGAAATTGGGACTTACGTTGAAAAGCTTATGACAAGTGAACTTTCAGGAAATGTTATAGATATCTGTCCTGTAGGAGCCCTAACCTCAAAACCATTTGCATTTAAAGCTCGTAATTGGGAATTAAAGGGAACAGAGACCATTGATGTTACTGATGCTGTTGGATCCAACATTTGGTGTGATGGTTCTGACATAAATGAGGAATGGATATCAGACAAGACTCGATTTTGTTATGACGGTTTGAAGAGGCAAAGGTTGAATGACCCTATGATTCGTGGTGCTGATGGACGCTTTAAGCCCGTGAGCTGGCGTGATGCCCTTGCTGTTGTTGCTGAGATGGCTCATAAAGTTAAGCCAGAAGAAATTGTTGGGGTTGCTGGTCAGCTGTCTGATGCCGAGTCCATGATGGCACTAAAAGACTTTTTAAATAAAATGGGGTCTAACAATGTGTGGTGCGAAGGAAATGGTTCCAATCGTGATGCTGATCTTCGATCTGGATATATAATGAACAGTAGCATTGCTGGACTTGAGAAGGCAGATGCTTTTCTATTGGTTGGCACCCAGCCAAGAGTAGAAGCTGCTATTGTAAATGCTAGAATCCGGAAGACAGTGTTATCTAACCAGGCCAAGGTTGGGTACGTTGGTCCTGAAGCTGATTTAAACTATGAACACCAGCATCTTGGAACAGGCCCCGATACACTTCTAGAACTTGCTGAGCGTCGCCACCCCTTTTCCTCAGTCCTCTTAAATGCCAAAAACCCGGCCATTATTGTTGGTGCTGGGCTGTTTGAGAGAAAAGACAAGGATGCAATTTTCTCAGCCCTTGAAACCATTGCCAAATATGCTGATGCTGTAAGGCCTGATTGGAATGGATTTAATGTACTGCTTCTCAAAGCCGCCCAGGCTGCAGCACTTGACCTTGGACTTGTGCCAGAATCTGAAAACAGCATTGAGTCTGCAAAATTTGTTTACCTGATGGGTGCTGATGATGTTAACTTAGACAAGGTTCCATCTGATGCATTTGTGGTTTATCAAGGGCATCATGGTGACCGGGGTGTGTATCGGGCTAATGTCATCCTCCCTGCAGCAGCGTTCAGTGAAAAGGAAGGAACATACGTAAATACTGAAGGGTGCTCTCAGCAAACATTGCCTGCAGTTCCAACTGTCGGTGATGCCAGGGACGACTGGAAGATACTCCGTGCTCTATCTGAGGTAGCAGGCGTGAAGCTGCCTTACGATACAGTTGGGACCCTCCGATCCCGGATAAAGACCGTGGCACCAAACATCTTAAACATAGACGAGAGAGAGCCAGCTACTTTTTCATTTTCGATTAAGCCTGAGACCACTCAGAAAATGGATTTGACTCCATTTGGTACTGCTGTTGATAATTTCTATATGACCGATTCCATCACCAGGGCATCAAAGATAATGGCACAATGCAGTGCGTTGCTATTGAAGAAGGGGCAAGTCAACCCCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko04723 ko04932 ko05010 ko05012 ko05016 map00190 map01100 map04714 map04723 map04932 map05010 map05012 map05016
Pfam Domains
Protein Families
Fer2_4 Molybdopterin NADH-G_4Fe-4S_3 NADH_dhqG_C

Protein Analysis

744

Amino Acids

80.81

Weight (kDa)

5.9

Isoelectric Point (pI)

34.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fer2_4 PF13510 78 - 154 6.3e-19 2Fe-2S iron-sulfur cluster binding domain
Fer2 PF00111 83 - 132 7.7e-07 2Fe-2S iron-sulfur cluster binding domain
NADH-G_4Fe-4S_3 PF10588 161 - 198 1.4e-16 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Fer4_Nqo3 PF22117 214 - 280 4.8e-33 NADH-quinone oxidoreductase subunit 3, ferredoxin-like domain
Fer4_NDSU1 PF22151 293 - 330 1.1e-09 NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain
Molybdopterin PF00384 336 - 656 4.1e-109 Molybdopterin oxidoreductase
NADH_dhqG_C PF09326 696 - 731 1.1e-11 NADH-ubiquinone oxidoreductase subunit G, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37510 AT5G37510
fragaria_vesca FvH4_1g30070
malus_domestica MD09G1268900.v1.1 MD17G1267300.v1.1
prunus_persica Prupe.3G165400_v2.0.a1
pyrus_communis pycom09g18080 pycom17g26640
rosa_chinensis RchiOBHm_Chr3g0491991
rosa_laevigata RLG00000022799 RLG00000022807
rosa_multiflora Rmu_sc0005238.1_g000005 Rmu_sc0036946.1_g000001
rosa_roxburghii Rroxscaffold_6G00392660
rosa_rugosa Rorug03G0251000
rosa_samantha Rh3AG301000 Rh3BG337200 Rh3CG334300 Rh3DG336600
rosa_wichuraiana Rw3G026610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1310, 2029
AccB7I CCANNNNNTGG 1 cut(s) 927
AccII CGCG 4 cut(s) 194, 221, 236, 483
AccIII TCCGGA 2 cut(s) 133, 1353
AciI CCGC 7 cut(s) 45, 150, 168, 182, 192, 194, 1650
AclWI GGATC 6 cut(s) 19, 573, 592, 912, 925, 2004
AcoI YGGCCR 3 cut(s) 147, 595, 1515
AcsI RAATTY 1 cut(s) 1715
AcuI CTGAAG 2 cut(s) 1422, 1899
AfaI GTAC 4 cut(s) 682, 1391, 1635, 2128
AfiI CCNNNNNNNGG 7 cut(s) 193, 927, 1059, 1381, 1386, 1919, 2166
AgsI TTSAA 6 cut(s) 677, 776, 997, 1012, 1580, 2209
AjnI CCWGG 7 cut(s) 23, 436, 561, 1374, 1653, 1928, 2165
AjuI GAANNNNNNNTTGG 4 cut(s) 503, 535, 1104, 1136
AluBI AGCT 9 cut(s) 124, 781, 863, 1059, 1138, 1331, 1406, 1981, 2066
AluI AGCT 9 cut(s) 124, 781, 863, 1059, 1138, 1331, 1406, 1981, 2066
Alw21I GWGCWC 3 cut(s) 126, 1889, 1957
Alw26I GTCTC 3 cut(s) 383, 884, 2087
AlwI GGATC 6 cut(s) 19, 573, 592, 912, 925, 2004
AlwNI CAGNNNCTG 1 cut(s) 1691
Ama87I CYCGRG 1 cut(s) 158
Aor13HI TCCGGA 2 cut(s) 133, 1353
ApaI GGGCCC 2 cut(s) 31, 208
ApeKI GCWGC 7 cut(s) 170, 1331, 1658, 1661, 1838, 1841, 1981
ApoI RAATTY 1 cut(s) 1715
Asp700I GAANNNNTTC 1 cut(s) 1219
AspA2I CCTAGG 2 cut(s) 38, 326
AspLEI GCGC 1 cut(s) 422
AsuC2I CCSGG 7 cut(s) 75, 119, 187, 227, 1514, 1805, 2014
AsuHPI GGTGA 5 cut(s) 390, 502, 1811, 1934, 2155
AvaI CYCGRG 1 cut(s) 158
AvaII GGWCC 6 cut(s) 77, 189, 641, 724, 1397, 2001
AvrII CCTAGG 2 cut(s) 38, 326
AxyI CCTNAGG 2 cut(s) 32, 276
BaeGI GKGCMC 2 cut(s) 31, 208
BaeI ACNNNNGTAYC 4 cut(s) 1381, 1414, 2118, 2151
BamHI GGATCC 1 cut(s) 917
BanI GGYRCC 2 cut(s) 1310, 2029
BanII GRGCYC 5 cut(s) 31, 126, 165, 208, 835
BarI GAAGNNNNNNTAC 2 cut(s) 1970, 2002
BbsI GAAGAC 1 cut(s) 1364
Bbv12I GWGCWC 3 cut(s) 126, 1889, 1957
BbvI GCAGC 7 cut(s) 182, 1318, 1645, 1673, 1850, 1853, 1968
BccI CCATC 8 cut(s) 487, 929, 1031, 1084, 1153, 1723, 1771, 2168
BceAI ACGGC 4 cut(s) 124, 162, 354, 726
BciT130I CCWGG 7 cut(s) 25, 438, 563, 1376, 1655, 1930, 2167
BciVI GTATCC 1 cut(s) 251
BclI TGATCA 1 cut(s) 538
BcnI CCSGG 7 cut(s) 75, 119, 187, 227, 1514, 1805, 2014
BcoDI GTCTC 3 cut(s) 383, 884, 2087
BfaI CTAG 4 cut(s) 39, 327, 1347, 1457
BfmI CTRYAG 4 cut(s) 825, 1659, 1836, 1905
BfuI GTATCC 1 cut(s) 251
BglI GCCNNNNNGGC 2 cut(s) 476, 1655
BlnI CCTAGG 2 cut(s) 38, 326
BlpI GCTNAGC 1 cut(s) 1467
Bme18I GGWCC 6 cut(s) 77, 189, 641, 724, 1397, 2001
BmeT110I CYCGRG 1 cut(s) 158
BoxI GACNNNNGTC 1 cut(s) 194
BpiI GAAGAC 1 cut(s) 1364
BpmI CTGGAG 1 cut(s) 545
Bpu1102I GCTNAGC 1 cut(s) 1467
BpuEI CTTGAG 2 cut(s) 110, 1301
BpuMI CCSGG 7 cut(s) 75, 119, 187, 227, 1514, 1805, 2014
BsaAI YACGTR 1 cut(s) 1870
BsaBI GATNNNNATC 1 cut(s) 1236
BsaI GGTCTC 2 cut(s) 884, 2087
BsaWI WCCGGW 2 cut(s) 133, 1353
BsaXI ACNNNNNCTCC 4 cut(s) 445, 475, 488, 518
Bsc4I CCNNNNNNNGG 7 cut(s) 193, 927, 1059, 1381, 1386, 1919, 2166
Bse118I RCCGGY 2 cut(s) 311, 359
Bse1I ACTGG 1 cut(s) 1943
Bse21I CCTNAGG 2 cut(s) 32, 276
Bse3DI GCAATG 4 cut(s) 354, 1269, 1584, 1898
Bse8I GATNNNNATC 1 cut(s) 1236
BseAI TCCGGA 2 cut(s) 133, 1353
BseBI CCWGG 7 cut(s) 25, 438, 563, 1376, 1655, 1930, 2167
BseGI GGATG 5 cut(s) 110, 321, 514, 1564, 1827
BseJI GATNNNNATC 1 cut(s) 1236
BseLI CCNNNNNNNGG 7 cut(s) 193, 927, 1059, 1381, 1386, 1919, 2166
BseMI GCAATG 4 cut(s) 354, 1269, 1584, 1898
BseMII CTCAG 8 cut(s) 1077, 1458, 1503, 1584, 1904, 1953, 2082, 2114
BseNI ACTGG 1 cut(s) 1943
BseRI GAGGAG 2 cut(s) 44, 47
BseSI GKGCMC 2 cut(s) 31, 208
BseX3I CGGCCG 1 cut(s) 147
BseXI GCAGC 7 cut(s) 182, 1318, 1645, 1673, 1850, 1853, 1968
BseYI CCCAGC 4 cut(s) 153, 713, 1314, 1532
Bsh1236I CGCG 4 cut(s) 194, 221, 236, 483
Bsh1285I CGRYCG 3 cut(s) 150, 198, 240
BshNI GGYRCC 2 cut(s) 1310, 2029
BsiEI CGRYCG 3 cut(s) 150, 198, 240
BsiHKAI GWGCWC 3 cut(s) 126, 1889, 1957
BsiHKCI CYCGRG 1 cut(s) 158
BslFI GGGAC 3 cut(s) 778, 1946, 2014
BslI CCNNNNNNNGG 7 cut(s) 193, 927, 1059, 1381, 1386, 1919, 2166
BsmAI GTCTC 3 cut(s) 383, 884, 2087
BsmFI GGGAC 3 cut(s) 778, 1946, 2014
Bso31I GGTCTC 2 cut(s) 884, 2087
BsoBI CYCGRG 1 cut(s) 158
Bsp120I GGGCCC 2 cut(s) 27, 204
Bsp1286I GDGCHC 7 cut(s) 31, 126, 165, 208, 835, 1889, 1957
Bsp13I TCCGGA 2 cut(s) 133, 1353
Bsp1407I TGTACA 1 cut(s) 680
Bsp1720I GCTNAGC 1 cut(s) 1467
Bsp19I CCATGG 1 cut(s) 102
Bsp68I TCGCGA 2 cut(s) 221, 483
BspACI CCGC 7 cut(s) 45, 150, 168, 182, 192, 194, 1650
BspCNI CTCAG 8 cut(s) 1078, 1459, 1502, 1583, 1903, 1954, 2083, 2113
BspEI TCCGGA 2 cut(s) 133, 1353
BspFNI CGCG 4 cut(s) 194, 221, 236, 483
BspHI TCATGA 1 cut(s) 660
BspMAI CTGCAG 3 cut(s) 1663, 1840, 1909
BspPI GGATC 6 cut(s) 19, 573, 592, 912, 925, 2004
BspT107I GGYRCC 2 cut(s) 1310, 2029
BspTNI GGTCTC 2 cut(s) 884, 2087
BsrDI GCAATG 4 cut(s) 354, 1269, 1584, 1898
BsrFI RCCGGY 2 cut(s) 311, 359
BsrGI TGTACA 1 cut(s) 680
BsrI ACTGG 1 cut(s) 1943
BssAI RCCGGY 2 cut(s) 311, 359
BssT1I CCWWGG 6 cut(s) 38, 102, 326, 727, 1380, 1672
Bst2UI CCWGG 7 cut(s) 25, 438, 563, 1376, 1655, 1930, 2167
Bst4CI ACNGT 8 cut(s) 658, 687, 992, 1265, 1363, 1918, 1996, 2026
Bst6I CTCTTC 2 cut(s) 608, 992
BstAPI GCANNNNNTGC 1 cut(s) 1900
BstAUI TGTACA 1 cut(s) 680
BstBAI YACGTR 1 cut(s) 1870
BstC8I GCNNGC 8 cut(s) 18, 297, 429, 481, 1061, 1905, 1972, 2064
BstDSI CCRYGG 5 cut(s) 102, 144, 192, 742, 2025
BstEII GGTNACC 1 cut(s) 1799
BstF5I GGATG 5 cut(s) 110, 321, 514, 1564, 1827
BstFNI CGCG 4 cut(s) 194, 221, 236, 483
BstHHI GCGC 1 cut(s) 422
BstMAI GTCTC 3 cut(s) 383, 884, 2087
BstMCI CGRYCG 3 cut(s) 150, 198, 240
BstNI CCWGG 7 cut(s) 25, 438, 563, 1376, 1655, 1930, 2167
BstNSI RCATGY 1 cut(s) 286
BstPAI GACNNNNGTC 1 cut(s) 194
BstPI GGTNACC 1 cut(s) 1799
BstSFI CTRYAG 4 cut(s) 825, 1659, 1836, 1905
BstSLI GKGCMC 2 cut(s) 31, 208
BstSNI TACGTA 1 cut(s) 1870
BstUI CGCG 4 cut(s) 194, 221, 236, 483
BstV1I GCAGC 7 cut(s) 182, 1318, 1645, 1673, 1850, 1853, 1968
BstV2I GAAGAC 1 cut(s) 1364
BstX2I RGATCY 2 cut(s) 584, 917
BstXI CCANNNNNNTGG 1 cut(s) 1433
BstYI RGATCY 2 cut(s) 584, 917
BstZI CGGCCG 1 cut(s) 147
Bsu36I CCTNAGG 2 cut(s) 32, 276
BsuI GTATCC 1 cut(s) 251
BtgI CCRYGG 5 cut(s) 102, 144, 192, 742, 2025
BtsCI GGATG 5 cut(s) 110, 321, 514, 1564, 1827
BtsI GCAGTG 1 cut(s) 2200
BtsIMutI CAGTG 4 cut(s) 603, 1368, 1855, 2200
BtuMI TCGCGA 2 cut(s) 221, 483
Cac8I GCNNGC 8 cut(s) 18, 297, 429, 481, 1061, 1905, 1972, 2064
CaiI CAGNNNCTG 1 cut(s) 1691
CciI TCATGA 1 cut(s) 660
CfoI GCGC 1 cut(s) 422
Cfr10I RCCGGY 2 cut(s) 311, 359
Cfr42I CCGCGG 1 cut(s) 195
CpoI CGGWCCG 1 cut(s) 189
CseI GACGC 3 cut(s) 242, 1050, 1460
Csp6I GTAC 4 cut(s) 681, 1390, 1634, 2127
CspI CGGWCCG 1 cut(s) 189
CviAII CATG 6 cut(s) 103, 283, 424, 661, 1156, 1796
CviQI GTAC 4 cut(s) 681, 1390, 1634, 2127
DraI TTTAAA 3 cut(s) 859, 1179, 1413
EaeI YGGCCR 3 cut(s) 147, 595, 1515
EagI CGGCCG 1 cut(s) 147
Eam1104I CTCTTC 2 cut(s) 608, 992
EarI CTCTTC 2 cut(s) 608, 992
EciI GGCGGA 1 cut(s) 171
Ecl136II GAGCTC 1 cut(s) 124
EclXI CGGCCG 1 cut(s) 147
Eco105I TACGTA 1 cut(s) 1870
Eco130I CCWWGG 6 cut(s) 38, 102, 326, 727, 1380, 1672
Eco147I AGGCCT 2 cut(s) 37, 1612
Eco24I GRGCYC 5 cut(s) 31, 126, 165, 208, 835
Eco31I GGTCTC 2 cut(s) 884, 2087
Eco32I GATATC 2 cut(s) 817, 963
Eco47I GGWCC 6 cut(s) 77, 189, 641, 724, 1397, 2001
Eco52I CGGCCG 1 cut(s) 147
Eco53kI GAGCTC 1 cut(s) 124
Eco57I CTGAAG 2 cut(s) 1422, 1899
Eco81I CCTNAGG 2 cut(s) 32, 276
Eco88I CYCGRG 1 cut(s) 158
Eco91I GGTNACC 1 cut(s) 1799
EcoICRI GAGCTC 1 cut(s) 124
EcoO109I RGGNCCY 6 cut(s) 27, 28, 204, 724, 1442, 2001
EcoO65I GGTNACC 1 cut(s) 1799
EcoRII CCWGG 7 cut(s) 23, 436, 561, 1374, 1653, 1928, 2165
EcoRV GATATC 2 cut(s) 817, 963
EcoT14I CCWWGG 6 cut(s) 38, 102, 326, 727, 1380, 1672
EcoT22I ATGCAT 1 cut(s) 1774
EcoT38I GRGCYC 5 cut(s) 31, 126, 165, 208, 835
ErhI CCWWGG 6 cut(s) 38, 102, 326, 727, 1380, 1672
FaeI CATG 6 cut(s) 106, 286, 427, 664, 1159, 1799
FaqI GGGAC 3 cut(s) 778, 1946, 2014
FatI CATG 6 cut(s) 102, 282, 423, 660, 1155, 1795
FauI CCCGC 1 cut(s) 175
FbaI TGATCA 1 cut(s) 538
FokI GGATG 5 cut(s) 97, 308, 501, 1571, 1814
FriOI GRGCYC 5 cut(s) 31, 126, 165, 208, 835
FspBI CTAG 4 cut(s) 39, 327, 1347, 1457
GlaI GCGC 1 cut(s) 421
GsaI CCCAGC 4 cut(s) 157, 717, 1318, 1536
GsuI CTGGAG 1 cut(s) 545
HgaI GACGC 3 cut(s) 242, 1050, 1460
HhaI GCGC 1 cut(s) 422
Hin1II CATG 6 cut(s) 106, 286, 427, 664, 1159, 1799
Hin6I GCGC 1 cut(s) 420
HinP1I GCGC 1 cut(s) 420
HincII GTYRAC 3 cut(s) 319, 1747, 2224
HindII GTYRAC 3 cut(s) 319, 1747, 2224
HindIII AAGCTT 1 cut(s) 779
HpaI GTTAAC 1 cut(s) 1747
HphI GGTGA 5 cut(s) 390, 502, 1811, 1934, 2155
Hpy166II GTNNAC 9 cut(s) 144, 253, 319, 628, 683, 794, 1723, 1747, 2224
Hpy188I TCNGA 9 cut(s) 589, 943, 967, 1144, 1693, 1768, 1963, 2009, 2103
Hpy8I GTNNAC 9 cut(s) 144, 253, 319, 628, 683, 794, 1723, 1747, 2224
Hpy99I CGWCG 4 cut(s) 236, 386, 413, 1476
HpyCH4III ACNGT 8 cut(s) 658, 687, 992, 1265, 1363, 1918, 1996, 2026
HpyCH4IV ACGT 3 cut(s) 771, 1392, 1869
HpySE526I ACGT 3 cut(s) 771, 1392, 1869
Hsp92II CATG 6 cut(s) 106, 286, 427, 664, 1159, 1799
HspAI GCGC 1 cut(s) 420
KflI GGGWCCC 1 cut(s) 2001
Kpn2I TCCGGA 2 cut(s) 133, 1353
Ksp22I TGATCA 1 cut(s) 538
KspAI GTTAAC 1 cut(s) 1747
KspI CCGCGG 1 cut(s) 195
LmnI GCTCC 5 cut(s) 57, 68, 121, 136, 830
Lsp1109I GCAGC 7 cut(s) 182, 1318, 1645, 1673, 1850, 1853, 1968
MaeI CTAG 4 cut(s) 39, 327, 1347, 1457
MaeII ACGT 3 cut(s) 771, 1392, 1869
MaeIII GTNAC 4 cut(s) 106, 396, 901, 1799
MboII GAAGA 8 cut(s) 76, 625, 1009, 1124, 1232, 1369, 1954, 2221
MflI RGATCY 2 cut(s) 584, 917
MhlI GDGCHC 7 cut(s) 31, 126, 165, 208, 835, 1889, 1957
MlyI GAGTC 5 cut(s) 658, 967, 1160, 1715, 2110
MmeI TCCRAC 3 cut(s) 895, 945, 1937
Mph1103I ATGCAT 1 cut(s) 1774
MroI TCCGGA 2 cut(s) 133, 1353
MroXI GAANNNNTTC 1 cut(s) 1219
MslI CAYNNNNRTG 3 cut(s) 287, 608, 1797
MspA1I CMGCKG 2 cut(s) 194, 1138
MvaI CCWGG 7 cut(s) 25, 438, 563, 1376, 1655, 1930, 2167
MvnI CGCG 4 cut(s) 194, 221, 236, 483
NciI CCSGG 7 cut(s) 75, 119, 187, 227, 1514, 1805, 2014
NcoI CCATGG 1 cut(s) 102
NlaIII CATG 6 cut(s) 106, 286, 427, 664, 1159, 1799
NmeAIII GCCGAG 2 cut(s) 39, 1174
NmuCI GTSAC 3 cut(s) 106, 396, 1799
NruI TCGCGA 2 cut(s) 221, 483
NsiI ATGCAT 1 cut(s) 1774
NspI RCATGY 1 cut(s) 286
PagI TCATGA 1 cut(s) 660
PceI AGGCCT 2 cut(s) 37, 1612
PcsI WCGNNNNNNNCGW 2 cut(s) 237, 246
PdmI GAANNNNTTC 1 cut(s) 1219
PfeI GAWTC 9 cut(s) 130, 210, 511, 600, 634, 1024, 1350, 1688, 2156
PflMI CCANNNNNTGG 1 cut(s) 927
PfoI TCCNGGA 2 cut(s) 561, 2012
Ple19I CGATCG 1 cut(s) 240
PleI GAGTC 5 cut(s) 658, 967, 1159, 1714, 2110
PpsI GAGTC 5 cut(s) 658, 967, 1159, 1714, 2110
Ppu21I YACGTR 1 cut(s) 1870
PpuMI RGGWCCY 2 cut(s) 724, 2001
PshAI GACNNNNGTC 1 cut(s) 194
Psp124BI GAGCTC 1 cut(s) 126
Psp5II RGGWCCY 2 cut(s) 724, 2001
Psp6I CCWGG 7 cut(s) 23, 436, 561, 1374, 1653, 1928, 2165
PspEI GGTNACC 1 cut(s) 1799
PspFI CCCAGC 4 cut(s) 153, 713, 1314, 1532
PspGI CCWGG 7 cut(s) 23, 436, 561, 1374, 1653, 1928, 2165
PspOMI GGGCCC 2 cut(s) 27, 204
PspPPI RGGWCCY 2 cut(s) 724, 2001
PstI CTGCAG 3 cut(s) 1663, 1840, 1909
PstNI CAGNNNCTG 1 cut(s) 1691
PsuI RGATCY 2 cut(s) 584, 917
PvuI CGATCG 1 cut(s) 240
PvuII CAGCTG 1 cut(s) 1138
RruI TCGCGA 2 cut(s) 221, 483
RsaI GTAC 4 cut(s) 682, 1391, 1635, 2128
RsaNI GTAC 4 cut(s) 681, 1390, 1634, 2127
RseI CAYNNNNRTG 3 cut(s) 287, 608, 1797
Rsr2I CGGWCCG 1 cut(s) 189
RsrII CGGWCCG 1 cut(s) 189
SacI GAGCTC 1 cut(s) 126
SacII CCGCGG 1 cut(s) 195
SchI GAGTC 5 cut(s) 658, 967, 1160, 1715, 2110
SduI GDGCHC 7 cut(s) 31, 126, 165, 208, 835, 1889, 1957
SfcI CTRYAG 4 cut(s) 825, 1659, 1836, 1905
Sfr303I CCGCGG 1 cut(s) 195
SgrAI CRCCGGYG 1 cut(s) 311
SgrBI CCGCGG 1 cut(s) 195
SinI GGWCC 6 cut(s) 77, 189, 641, 724, 1397, 2001
SmiMI CAYNNNNRTG 3 cut(s) 287, 608, 1797
SmlI CTYRAG 2 cut(s) 125, 1280
SmoI CTYRAG 2 cut(s) 125, 1280
SnaBI TACGTA 1 cut(s) 1870
SseBI AGGCCT 2 cut(s) 37, 1612
SsiI CCGC 7 cut(s) 45, 150, 168, 182, 192, 194, 1650
SspMI CTAG 4 cut(s) 39, 327, 1347, 1457
SstI GAGCTC 1 cut(s) 126
StuI AGGCCT 2 cut(s) 37, 1612
StyI CCWWGG 6 cut(s) 38, 102, 326, 727, 1380, 1672
TaaI ACNGT 8 cut(s) 658, 687, 992, 1265, 1363, 1918, 1996, 2026
TaiI ACGT 3 cut(s) 774, 1395, 1872
TaqI TCGA 5 cut(s) 240, 384, 976, 1243, 2081
TaqII GACCGA 1 cut(s) 2168
TatI WGTACW 2 cut(s) 680, 1633
TauI GCSGC 3 cut(s) 47, 152, 1652
TfiI GAWTC 9 cut(s) 130, 210, 511, 600, 634, 1024, 1350, 1688, 2156
TscAI CASTG 4 cut(s) 610, 1368, 1855, 2200
TseFI GTSAC 3 cut(s) 106, 396, 1799
TseI GCWGC 7 cut(s) 170, 1331, 1658, 1661, 1838, 1841, 1981
Tsp45I GTSAC 3 cut(s) 106, 396, 1799
TspDTI ATGAA 6 cut(s) 458, 524, 626, 1274, 1434, 2064
TspGWI ACGGA 3 cut(s) 270, 277, 1940
TspRI CASTG 4 cut(s) 610, 1368, 1855, 2200
Van91I CCANNNNNTGG 1 cut(s) 927
VpaK11BI GGWCC 6 cut(s) 77, 189, 641, 724, 1397, 2001
XapI RAATTY 1 cut(s) 1715
XbaI TCTAGA 1 cut(s) 1456
XceI RCATGY 1 cut(s) 286
XcmI CCANNNNNNNNNTGG 2 cut(s) 1382, 2104
XmaJI CCTAGG 2 cut(s) 38, 326
XmnI GAANNNNTTC 1 cut(s) 1219
XspI CTAG 4 cut(s) 39, 327, 1347, 1457
Zsp2I ATGCAT 1 cut(s) 1774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.