Rmu_sc0005238.1_g000005

Belongs to the complex I 75 kDa subunit family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005238.1
OG0011004
Physical Location & Seq
Forward (+)
36316 .. 48843
12528 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005238.1_g000005.1.cds

Sequence Viewer

Length: 2202 bp
atggggttgggatcgcttgcttccagggccctaaggcccagggccgcaaggctcctcctcggctcccaaaaccccggacccttcttctccttccagagaaccatggtcacatccaccccggagctcaagaatccggagccgtccacggccgcccagcccgagccccccgccgccgccgaccttccgccccggaccccggtcggtggggcccgaatccacttcgcgaacccggacgacgcgatcgaggtgttcgtggacggataccctgtgaaaatccctaagggcatgtccgtgttgcaagcgtgtgaggtcgccggtgttgacatccctaggttttgctaccacagcagattgtccattgccggtaattgccgtatgtgtctcgtcgaggttgagaagtcacccaagcccgtcgcctcttgcgccatgcctgctatgcctgagttggaaggcacatccagggccctaaggcccagggccgcaaggctcctcctcggctcccaaaaccccggacccttcttctccttccagagaaccatggtcacatccaccccggagctcaagaatccggagccgtccacggccgcccagcccgagccccccgccgccgccgaccttccgccccggaccccggtcggtggggcccgaatccacttcgcgaacccggacgacgcgatcgaggtgttcgtggacggataccctgtgaaaatccctaagggcatgtccgtgttgcaagcgtgtgaggtcgccggtgttgacatccctaggttttgctaccacagcagattgtccattgccggtaattgccgtatgtgtctcgtcgaggttgagaagtcacccaagcccgtcgcctcttgcgccatgcctgctatgcctggtatgaaaattaagactgacactccaatagccaagaaggctcgcgaaggggacataaatgaggaatggatatcagacaagactcgattttgttatgacggtttgaagaggcaaaggttgaatgaccctatgattcgtggtgctgatggacgctttaagcccgtgagctggcgtgatgcccttgctgttgttgctgagatggctcataaagttaagccagaagaaattgttggggttgctggtcagctgtctgatgccgagtccatgatggcactaaaagactttttaaataaaatggggtctaacaatgtgtggtgcgaaggaaatggttccaatcgtgatgctgatcttcgatctggatatataatgaacagtagcattgctggacttgagaaggcagatgcttttctattggttggcacccagccaagagtagaagctgctattgtaaatgctagaatccggaagacagtgttatctaaccaagccaaggttgggtacgttggtcctgaagctgatttaaactatgaacaccagcatcttggaacaggccccgatacacttctagaacttgctgagcatcgccaccccttttcctcagtcctcttaaatgccaaaaaccctgccattattgttggtgctgggctgtttgagagaaaagacaaggatgcaattttctcagcccttgaaaccattgccaaatatgctgatgctgtaaggcctgattggaatggatttaatgtactgcttctcaaagccgcccaggctgcagcacttgaccttggacttgtgccagaatctgaaaacagcattgagtctgcaaaatttgtttacctgatgggtgctgatgatgttaacttagacaaggttccatctgatgcatttgtggtttatcaagggcatcatggtgaccggggtgtgtatcgggctaatgtcatcctccctgcagcagcgttcagtgaaaaggaaggaacatacgtaaatactgaagggtgctctcagcaaacattgcctgcagttccaactgtcggtgatgccagggacgactggaagatactccgtgctctatctgaggtagcaggcgtcaagctgccttatgatacagttgggaccctccgatcccggataaagaccgtggcaccaaacatcttaaacatagacgagagagagccagctactttttcattttcgattaagcctgagaccactcagaaaatggatttgattccatttggtactgctgttgataatttctatatgaccgattccatcaccagggcatcaaagataatggcacaatgcagtgcgttgctattgaagaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko04723 ko04932 ko05010 ko05012 ko05016 map00190 map01100 map04714 map04723 map04932 map05010 map05012 map05016
Pfam Domains
Protein Families
Fer2_4 Molybdopterin NADH-G_4Fe-4S_3 NADH_dhqG_C

Protein Analysis

733

Amino Acids

79.3

Weight (kDa)

6.85

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37510 AT5G37510
fragaria_vesca FvH4_1g30070
malus_domestica MD09G1268900.v1.1 MD17G1267300.v1.1
prunus_persica Prupe.3G165400_v2.0.a1
pyrus_communis pycom09g18080 pycom17g26640
rosa_chinensis RchiOBHm_Chr3g0491991
rosa_laevigata RLG00000022799 RLG00000022807
rosa_multiflora Rmu_sc0005238.1_g000005 Rmu_sc0036946.1_g000001
rosa_roxburghii Rroxscaffold_6G00392660
rosa_rugosa Rorug03G0251000
rosa_samantha Rh3AG301000 Rh3BG337200 Rh3CG334300 Rh3DG336600
rosa_wichuraiana Rw3G026610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1295, 2014
AccII CGCG 5 cut(s) 224, 239, 659, 674, 921
AccIII TCCGGA 3 cut(s) 133, 568, 1338
AclWI GGATC 2 cut(s) 19, 1989
AcoI YGGCCR 2 cut(s) 147, 582
AcsI RAATTY 1 cut(s) 1700
AcuI CTGAAG 2 cut(s) 1407, 1884
AcyI GRCGYC 1 cut(s) 1959
AfaI GTAC 3 cut(s) 1376, 1620, 2113
AfiI CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
AgsI TTSAA 4 cut(s) 982, 997, 1565, 2194
AjnI CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
AjuI GAANNNNNNNTTGG 2 cut(s) 1089, 1121
AluBI AGCT 8 cut(s) 124, 559, 1044, 1123, 1316, 1391, 1966, 2051
AluI AGCT 8 cut(s) 124, 559, 1044, 1123, 1316, 1391, 1966, 2051
Alw21I GWGCWC 4 cut(s) 126, 561, 1874, 1942
Alw26I GTCTC 3 cut(s) 386, 821, 2072
AlwI GGATC 2 cut(s) 19, 1989
AlwNI CAGNNNCTG 1 cut(s) 1676
Ama87I CYCGRG 2 cut(s) 158, 593
Aor13HI TCCGGA 3 cut(s) 133, 568, 1338
ApaI GGGCCC 4 cut(s) 31, 211, 466, 646
ApeKI GCWGC 6 cut(s) 1316, 1643, 1646, 1823, 1826, 1966
ApoI RAATTY 1 cut(s) 1700
Asp700I GAANNNNTTC 1 cut(s) 1204
AspA2I CCTAGG 2 cut(s) 329, 764
AspLEI GCGC 2 cut(s) 425, 860
AsuHPI GGTGA 5 cut(s) 393, 828, 1796, 1919, 2140
AvaI CYCGRG 2 cut(s) 158, 593
AvaII GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
AvrII CCTAGG 2 cut(s) 329, 764
AxyI CCTNAGG 4 cut(s) 32, 279, 467, 714
BaeGI GKGCMC 4 cut(s) 31, 211, 466, 646
BaeI ACNNNNGTAYC 4 cut(s) 1366, 1399, 2103, 2136
BanI GGYRCC 2 cut(s) 1295, 2014
BanII GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
BbsI GAAGAC 1 cut(s) 1349
Bbv12I GWGCWC 4 cut(s) 126, 561, 1874, 1942
BbvI GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
BccI CCATC 6 cut(s) 1016, 1069, 1138, 1708, 1756, 2153
BceAI ACGGC 6 cut(s) 124, 162, 357, 559, 597, 792
BciT130I CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
BciVI GTATCC 2 cut(s) 254, 689
BcoDI GTCTC 3 cut(s) 386, 821, 2072
BfaI CTAG 4 cut(s) 330, 765, 1332, 1442
BfmI CTRYAG 3 cut(s) 1644, 1821, 1890
BfuI GTATCC 2 cut(s) 254, 689
BglI GCCNNNNNGGC 2 cut(s) 914, 1640
BlnI CCTAGG 2 cut(s) 329, 764
BlpI GCTNAGC 1 cut(s) 1452
Bme18I GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
BmeT110I CYCGRG 2 cut(s) 158, 593
BoxI GACNNNNGTC 2 cut(s) 197, 632
BpiI GAAGAC 1 cut(s) 1349
Bpu1102I GCTNAGC 1 cut(s) 1452
BpuEI CTTGAG 3 cut(s) 110, 545, 1286
BsaAI YACGTR 1 cut(s) 1855
BsaBI GATNNNNATC 1 cut(s) 1221
BsaHI GRCGYC 1 cut(s) 1959
BsaI GGTCTC 1 cut(s) 2072
BsaWI WCCGGW 3 cut(s) 133, 568, 1338
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bsc4I CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
Bse118I RCCGGY 4 cut(s) 314, 362, 749, 797
Bse1I ACTGG 1 cut(s) 1928
Bse21I CCTNAGG 4 cut(s) 32, 279, 467, 714
Bse3DI GCAATG 5 cut(s) 357, 792, 1254, 1569, 1883
Bse8I GATNNNNATC 1 cut(s) 1221
BseAI TCCGGA 3 cut(s) 133, 568, 1338
BseBI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
BseGI GGATG 7 cut(s) 110, 324, 455, 545, 759, 1549, 1812
BseJI GATNNNNATC 1 cut(s) 1221
BseLI CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
BseMI GCAATG 5 cut(s) 357, 792, 1254, 1569, 1883
BseMII CTCAG 9 cut(s) 432, 1062, 1443, 1488, 1569, 1889, 1938, 2067, 2099
BseNI ACTGG 1 cut(s) 1928
BseRI GAGGAG 4 cut(s) 44, 47, 479, 482
BseSI GKGCMC 4 cut(s) 31, 211, 466, 646
BseX3I CGGCCG 2 cut(s) 147, 582
BseXI GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
BseYI CCCAGC 4 cut(s) 153, 588, 1299, 1517
Bsh1236I CGCG 5 cut(s) 224, 239, 659, 674, 921
Bsh1285I CGRYCG 6 cut(s) 150, 201, 243, 585, 636, 678
BshNI GGYRCC 2 cut(s) 1295, 2014
BsiEI CGRYCG 6 cut(s) 150, 201, 243, 585, 636, 678
BsiHKAI GWGCWC 4 cut(s) 126, 561, 1874, 1942
BsiHKCI CYCGRG 2 cut(s) 158, 593
BslFI GGGAC 3 cut(s) 941, 1931, 1999
BslI CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
BsmAI GTCTC 3 cut(s) 386, 821, 2072
BsmFI GGGAC 3 cut(s) 941, 1931, 1999
Bso31I GGTCTC 1 cut(s) 2072
BsoBI CYCGRG 2 cut(s) 158, 593
Bsp120I GGGCCC 4 cut(s) 27, 207, 462, 642
Bsp13I TCCGGA 3 cut(s) 133, 568, 1338
Bsp143I GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
Bsp1720I GCTNAGC 1 cut(s) 1452
Bsp19I CCATGG 2 cut(s) 102, 537
Bsp68I TCGCGA 3 cut(s) 224, 659, 921
BspCNI CTCAG 9 cut(s) 433, 1063, 1444, 1487, 1568, 1888, 1939, 2068, 2098
BspEI TCCGGA 3 cut(s) 133, 568, 1338
BspFNI CGCG 5 cut(s) 224, 239, 659, 674, 921
BspMAI CTGCAG 3 cut(s) 1648, 1825, 1894
BspPI GGATC 2 cut(s) 19, 1989
BspT107I GGYRCC 2 cut(s) 1295, 2014
BspTNI GGTCTC 1 cut(s) 2072
BsrDI GCAATG 5 cut(s) 357, 792, 1254, 1569, 1883
BsrFI RCCGGY 4 cut(s) 314, 362, 749, 797
BsrI ACTGG 1 cut(s) 1928
BssAI RCCGGY 4 cut(s) 314, 362, 749, 797
BssMI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
BssNI GRCGYC 1 cut(s) 1959
BssT1I CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
Bst2UI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
Bst4CI ACNGT 6 cut(s) 977, 1250, 1348, 1903, 1981, 2011
Bst6I CTCTTC 1 cut(s) 977
BstACI GRCGYC 1 cut(s) 1959
BstAPI GCANNNNNTGC 1 cut(s) 1885
BstBAI YACGTR 1 cut(s) 1855
BstDSI CCRYGG 5 cut(s) 102, 144, 537, 579, 2010
BstEII GGTNACC 1 cut(s) 1784
BstF5I GGATG 7 cut(s) 110, 324, 455, 545, 759, 1549, 1812
BstFNI CGCG 5 cut(s) 224, 239, 659, 674, 921
BstHHI GCGC 2 cut(s) 425, 860
BstKTI GATC 6 cut(s) 14, 243, 678, 1225, 1232, 1997
BstMAI GTCTC 3 cut(s) 386, 821, 2072
BstMBI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
BstMCI CGRYCG 6 cut(s) 150, 201, 243, 585, 636, 678
BstNI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
BstNSI RCATGY 2 cut(s) 289, 724
BstPAI GACNNNNGTC 2 cut(s) 197, 632
BstPI GGTNACC 1 cut(s) 1784
BstSFI CTRYAG 3 cut(s) 1644, 1821, 1890
BstSLI GKGCMC 4 cut(s) 31, 211, 466, 646
BstSNI TACGTA 1 cut(s) 1855
BstUI CGCG 5 cut(s) 224, 239, 659, 674, 921
BstV1I GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
BstV2I GAAGAC 1 cut(s) 1349
BstXI CCANNNNNNTGG 1 cut(s) 1418
BstZI CGGCCG 2 cut(s) 147, 582
Bsu36I CCTNAGG 4 cut(s) 32, 279, 467, 714
BsuI GTATCC 2 cut(s) 254, 689
BtgI CCRYGG 5 cut(s) 102, 144, 537, 579, 2010
BtgZI GCGATG 1 cut(s) 1442
BtsCI GGATG 7 cut(s) 110, 324, 455, 545, 759, 1549, 1812
BtsI GCAGTG 1 cut(s) 2185
BtsIMutI CAGTG 3 cut(s) 1353, 1840, 2185
BtuMI TCGCGA 3 cut(s) 224, 659, 921
CaiI CAGNNNCTG 1 cut(s) 1676
CfoI GCGC 2 cut(s) 425, 860
Cfr10I RCCGGY 4 cut(s) 314, 362, 749, 797
CseI GACGC 4 cut(s) 245, 680, 1035, 1948
Csp6I GTAC 3 cut(s) 1375, 1619, 2112
CviAII CATG 8 cut(s) 103, 286, 427, 538, 721, 862, 1141, 1781
CviQI GTAC 3 cut(s) 1375, 1619, 2112
DpnI GATC 6 cut(s) 13, 242, 677, 1224, 1231, 1996
DpnII GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
DraI TTTAAA 2 cut(s) 1164, 1398
EaeI YGGCCR 2 cut(s) 147, 582
EagI CGGCCG 2 cut(s) 147, 582
Eam1104I CTCTTC 1 cut(s) 977
EarI CTCTTC 1 cut(s) 977
EciI GGCGGA 2 cut(s) 174, 609
Ecl136II GAGCTC 2 cut(s) 124, 559
EclXI CGGCCG 2 cut(s) 147, 582
Eco105I TACGTA 1 cut(s) 1855
Eco130I CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
Eco147I AGGCCT 1 cut(s) 1597
Eco24I GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
Eco31I GGTCTC 1 cut(s) 2072
Eco32I GATATC 1 cut(s) 948
Eco47I GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
Eco52I CGGCCG 2 cut(s) 147, 582
Eco53kI GAGCTC 2 cut(s) 124, 559
Eco57I CTGAAG 2 cut(s) 1407, 1884
Eco81I CCTNAGG 4 cut(s) 32, 279, 467, 714
Eco88I CYCGRG 2 cut(s) 158, 593
Eco91I GGTNACC 1 cut(s) 1784
EcoICRI GAGCTC 2 cut(s) 124, 559
EcoO109I RGGNCCY 8 cut(s) 27, 28, 207, 462, 463, 642, 1427, 1986
EcoO65I GGTNACC 1 cut(s) 1784
EcoRII CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
EcoRV GATATC 1 cut(s) 948
EcoT14I CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
EcoT22I ATGCAT 1 cut(s) 1759
EcoT38I GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
ErhI CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
FaeI CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
FaqI GGGAC 3 cut(s) 941, 1931, 1999
FatI CATG 8 cut(s) 102, 285, 426, 537, 720, 861, 1140, 1780
FauI CCCGC 2 cut(s) 175, 610
FokI GGATG 7 cut(s) 97, 311, 442, 532, 746, 1556, 1799
FriOI GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
FspBI CTAG 4 cut(s) 330, 765, 1332, 1442
GlaI GCGC 2 cut(s) 424, 859
GsaI CCCAGC 4 cut(s) 157, 592, 1303, 1521
HgaI GACGC 4 cut(s) 245, 680, 1035, 1948
HhaI GCGC 2 cut(s) 425, 860
Hin1I GRCGYC 1 cut(s) 1959
Hin1II CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
Hin6I GCGC 2 cut(s) 423, 858
HinP1I GCGC 2 cut(s) 423, 858
HincII GTYRAC 3 cut(s) 322, 757, 1732
HindII GTYRAC 3 cut(s) 322, 757, 1732
HpaI GTTAAC 1 cut(s) 1732
HphI GGTGA 5 cut(s) 393, 828, 1796, 1919, 2140
Hpy166II GTNNAC 8 cut(s) 144, 256, 322, 579, 691, 757, 1708, 1732
Hpy188I TCNGA 7 cut(s) 952, 1129, 1678, 1753, 1948, 1994, 2088
Hpy8I GTNNAC 8 cut(s) 144, 256, 322, 579, 691, 757, 1708, 1732
Hpy99I CGWCG 6 cut(s) 239, 389, 416, 674, 824, 851
HpyCH4III ACNGT 6 cut(s) 977, 1250, 1348, 1903, 1981, 2011
HpyCH4IV ACGT 2 cut(s) 1377, 1854
HpyCH4V TGCA 9 cut(s) 298, 733, 1547, 1646, 1697, 1757, 1823, 1892, 2178
HpySE526I ACGT 2 cut(s) 1377, 1854
Hsp92I GRCGYC 1 cut(s) 1959
Hsp92II CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
HspAI GCGC 2 cut(s) 423, 858
KflI GGGWCCC 1 cut(s) 1986
Kpn2I TCCGGA 3 cut(s) 133, 568, 1338
KspAI GTTAAC 1 cut(s) 1732
Kzo9I GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
LmnI GCTCC 8 cut(s) 57, 68, 121, 136, 492, 503, 556, 571
Lsp1109I GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
MaeI CTAG 4 cut(s) 330, 765, 1332, 1442
MaeII ACGT 2 cut(s) 1377, 1854
MaeIII GTNAC 5 cut(s) 106, 399, 541, 834, 1784
MalI GATC 6 cut(s) 13, 242, 677, 1224, 1231, 1996
MboI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
MboII GAAGA 7 cut(s) 76, 511, 994, 1109, 1217, 1354, 1939
MluCI AATT 7 cut(s) 367, 802, 885, 1101, 1548, 1700, 2125
MlyI GAGTC 3 cut(s) 952, 1145, 1700
MmeI TCCRAC 2 cut(s) 426, 1922
Mph1103I ATGCAT 1 cut(s) 1759
MroI TCCGGA 3 cut(s) 133, 568, 1338
MroXI GAANNNNTTC 1 cut(s) 1204
MslI CAYNNNNRTG 3 cut(s) 290, 725, 1782
MspA1I CMGCKG 1 cut(s) 1123
MvaI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
MvnI CGCG 5 cut(s) 224, 239, 659, 674, 921
NcoI CCATGG 2 cut(s) 102, 537
NdeII GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
NlaIII CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
NmeAIII GCCGAG 3 cut(s) 39, 474, 1159
NmuCI GTSAC 5 cut(s) 106, 399, 541, 834, 1784
NruI TCGCGA 3 cut(s) 224, 659, 921
NsiI ATGCAT 1 cut(s) 1759
NspI RCATGY 2 cut(s) 289, 724
PasI CCCWGGG 2 cut(s) 39, 474
PceI AGGCCT 1 cut(s) 1597
PcsI WCGNNNNNNNCGW 4 cut(s) 240, 249, 675, 684
PdmI GAANNNNTTC 1 cut(s) 1204
PfeI GAWTC 9 cut(s) 130, 213, 565, 648, 1009, 1335, 1673, 2101, 2141
PfoI TCCNGGA 1 cut(s) 1997
Ple19I CGATCG 2 cut(s) 243, 678
PleI GAGTC 3 cut(s) 952, 1144, 1699
PpsI GAGTC 3 cut(s) 952, 1144, 1699
Ppu21I YACGTR 1 cut(s) 1855
PpuMI RGGWCCY 1 cut(s) 1986
PshAI GACNNNNGTC 2 cut(s) 197, 632
Psp124BI GAGCTC 2 cut(s) 126, 561
Psp5II RGGWCCY 1 cut(s) 1986
Psp6I CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
PspEI GGTNACC 1 cut(s) 1784
PspFI CCCAGC 4 cut(s) 153, 588, 1299, 1517
PspGI CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
PspOMI GGGCCC 4 cut(s) 27, 207, 462, 642
PspPPI RGGWCCY 1 cut(s) 1986
PstI CTGCAG 3 cut(s) 1648, 1825, 1894
PstNI CAGNNNCTG 1 cut(s) 1676
PvuI CGATCG 2 cut(s) 243, 678
PvuII CAGCTG 1 cut(s) 1123
RruI TCGCGA 3 cut(s) 224, 659, 921
RsaI GTAC 3 cut(s) 1376, 1620, 2113
RsaNI GTAC 3 cut(s) 1375, 1619, 2112
RseI CAYNNNNRTG 3 cut(s) 290, 725, 1782
SacI GAGCTC 2 cut(s) 126, 561
Sau3AI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
SchI GAGTC 3 cut(s) 952, 1145, 1700
SfcI CTRYAG 3 cut(s) 1644, 1821, 1890
SgrAI CRCCGGYG 2 cut(s) 314, 749
SinI GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
SmiMI CAYNNNNRTG 3 cut(s) 290, 725, 1782
SmlI CTYRAG 3 cut(s) 125, 560, 1265
SmoI CTYRAG 3 cut(s) 125, 560, 1265
SnaBI TACGTA 1 cut(s) 1855
Sse9I AATT 7 cut(s) 367, 802, 885, 1101, 1548, 1700, 2125
SseBI AGGCCT 1 cut(s) 1597
SspMI CTAG 4 cut(s) 330, 765, 1332, 1442
SstI GAGCTC 2 cut(s) 126, 561
StuI AGGCCT 1 cut(s) 1597
StyI CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
TaaI ACNGT 6 cut(s) 977, 1250, 1348, 1903, 1981, 2011
TaiI ACGT 2 cut(s) 1380, 1857
TaqI TCGA 7 cut(s) 243, 387, 678, 822, 961, 1228, 2066
TaqII GACCGA 1 cut(s) 2153
TasI AATT 7 cut(s) 367, 802, 885, 1101, 1548, 1700, 2125
TatI WGTACW 1 cut(s) 1618
TauI GCSGC 9 cut(s) 47, 152, 173, 176, 482, 587, 608, 611, 1637
TfiI GAWTC 9 cut(s) 130, 213, 565, 648, 1009, 1335, 1673, 2101, 2141
TscAI CASTG 3 cut(s) 1353, 1840, 2185
TseFI GTSAC 5 cut(s) 106, 399, 541, 834, 1784
TseI GCWGC 6 cut(s) 1316, 1643, 1646, 1823, 1826, 1966
Tsp45I GTSAC 5 cut(s) 106, 399, 541, 834, 1784
TspDTI ATGAA 4 cut(s) 896, 1259, 1419, 2049
TspGWI ACGGA 5 cut(s) 273, 280, 708, 715, 1925
TspRI CASTG 3 cut(s) 1353, 1840, 2185
VpaK11BI GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
XapI RAATTY 1 cut(s) 1700
XbaI TCTAGA 1 cut(s) 1441
XceI RCATGY 2 cut(s) 289, 724
XcmI CCANNNNNNNNNTGG 2 cut(s) 1367, 2089
XmaJI CCTAGG 2 cut(s) 329, 764
XmnI GAANNNNTTC 1 cut(s) 1204
XspI CTAG 4 cut(s) 330, 765, 1332, 1442
Zsp2I ATGCAT 1 cut(s) 1759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.