Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0004178

Physical Location & Seq

Genomic Coordinates Forward (+)

37328167 .. 37336391

Gene Structure 8225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1291300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGTATTTCCCGCCGTGTATTTTCATACATTTTTCAGTGTTCCGCGTCTCTCTCTCTCTGATTCGCCGTCGGCAAAAAAATTGGATTGTGAAAATTGAAAGCTGGAGGTCATCGATCATCAACGCTCAACAAGCAGTCACAGCTGCAGTTTTGCTGCTTCTTTGTTCTCAAACAATGGAGGTGGATTCACTACAATACTTACGGGATGACCAAACAAACAATTGTAGGAGTTTTGGAAGCATTAATCATCCATCTAGCCAATCGAGAAAGATATCGATTGGAGTTGTGGTAGACCCATCAACCAAGAAAAAGTCTGGAGTCACCAAGGTAGGTGAACCTGTGGTGCCAAATGCAGAAAGGGGAACATCTAATTTAGGCAATACCACAGAGGAAATAAGCAAGGAGCAAGATGTCACAGCTGCCAAGAAAATAAAACAAGCTAGGGATCCAGAGCAGGTGAATTCCCCATGGATTAGTACTGCATCATTCCACCAGAAAATGCGTACTTCAGATCCCCCTCTTCATGCAAAACAGTCTTCTGATTTGCCATCTTGTAGTGGGAAGCAGTCCAAATGTGATGGAACAAGGAATGCACTGGTTACAAATTCTGTTCAGTTTTTAGCAAACCAGACTTCCTTTTTCCAGTCTGATGGTAAGAAGCAGAACTTTGATGGAGTTAGCTACAGAAAGAGGGGAGAGAAGGATGGATCAGTGGAACTTCAGGATTTCACATTTGTGACTGCACAGGAAGTTGTAATGACGGATAAGGATTCACCAGTTGATAAAACAGATGCAACAGACAAGGAGGTGACAGTGGATAAAACAGATGCAACAGAAAGCAGGAGAACCGAAACTCTCAAAATGAAGCTTTGGGAGGTATTGGGAACTGTTTCTTCACCTGATGAGTATTCCAAATCTCAGCCTCCTGAGGTTGGTGATAGTAATTTAAATCCACAGCCAGAATTTGATCAAATGGGTTCCACAGTTGTCAAGCCTAAGCATATACCAGAGCAAAAGTATGATGACAAGGGTGATGCATTTATCAAACCCCGACAAAATTCAGATACTATAGAAATGGATTCTGAAAGTCTTGATAATATTGTCAGGAGACCTGTGACTTATTCATTGAGCCGAAAGAGAGGTCCAACCAAAAAACAGCAGACAAGTACAAAAAATGGTCCATCCTCTGGTTACAAACTGAAACAGCAAGAGAACAACATATTTTCCTTTGAACAAGACTGCGATGGGAAGCTACATGGCTTTTCTGGTGGTGGATCCTCAAAGTCTATGCGGAAGAAGACAGGGGTCAAAAGTTTCAGAACTGAGTCGCATGGGATCTGCCTTCCTGAAAAGGATAAATCAACTAAGACTCAAAAAGAGATTATTAGGAGTGAGCCAGAATCACCTGCCAAGCAAAATAGTTCTGTAGGCAAGAAAATAGGAGATTCTCGTGGTTGCCAACATGAGAATAAAAGAGAGTATCATGAACTGGAAAAAAATATTCAAAAGCAGGAAATCTGCCGATCACCACTCAAATACAAGAAATTTAAGGCAGATTTTGTCATTCCAGCAAATAAAGACTACCAGGAAGACAATGGCAATCCAAGCTTGAAGAAAGCTACTAATCCAGAAGCAGATGATCTGAGTCCCAAATTTGGAATTAAAACACCCACATCAAGTTCTTCCCCTACCTCAATCCCAAAATCAGACCAAATGGTAGATGCTAGTAGTCCTGCTGTAACAGAGAGGAGATTTACTGTGGGAGACATTCGAAGTTTCAGTACTTTCTGGACTCCAAAACAAGATTGTTGTGATAATGAACAAGCAAAATCTTCTGATGCTGTAGAGGAACTCAAGGATTCACCATTGAGAAAAACAACACCGGATATGGAAGAAAATGCTGCAGAAGATGGCCTTCTTTCATCATCATCTGAAGAGGGGGACTTGAGGAATTGTGGAGAAGGTTCTCCTATTATCCAAGGACTTGACTGGACTGAAGAAGATAACTGGATAGAGGAACCTTCAGAGCCTAATCTAGTGGATGGACTGGCTAGGGCTGTTGAATTGTTTACATTGGAATTAGAAAAACTTAAAGCCAAAATGAGGTCAGCAACTAATAGGAAATCCTCTGAAATTTTAATGTCTGTTGCTGCGGAGGTACATATGCAGCTGCAAACCGTTGAGTCTCAGATTCAAACAGACATAGGAAAGCTCACAAACCTCAGTAAATCAAAGAGAAAAAGGCTGGAATCAAGGTTTGAAGAGCAACAAGAACAATTGAAAGTGATTTATGACAAGTTCAAGGAACAAGTCAATCAGCATCTTCAGGAATGCAGGAGCACACTTGAAGGGCTGGAAGTGTACCTGACAGAGTTTAAGGGAACTGTTGATAAGCAAAAAGCATCACACAGAAAGCTTCTCGTGCAAGTGGAAGAAGCAATTGAGACCCAATTCAATGATGCCCAAAGAAGAATCCAAGTCACTCAAAAGATGGCGCATGGAAAGATGCTCCAGTTGAAACACGAACTGGCATTGTGTTTGAAAGAGGGCATTCTAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0007049 GO:0008150 GO:0009987 GO:0010564 GO:0022414 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0040020 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044087 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051321 GO:0051445 GO:0051726 GO:0051783 GO:0051983 GO:0060629 GO:0060631 GO:0065007 GO:0070013 GO:0090173 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

854

Amino Acids

95.77

Weight (kDa)

7.79

Isoelectric Point (pI)

58.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ASY3-like	PF20435	74 - 661	4e-35	Meiosis-specific protein ASY3-like
ASY3-like	PF20435	655 - 849	1.3e-47	Meiosis-specific protein ASY3-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004178)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT5G20995
fragaria_vesca	FvH4_1g26160 FvH4_1g26160 FvH4_4g08230
malus_domestica	MD09G1291300.v1.1 MD17G1286100.v1.1
prunus_persica	Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1
pyrus_communis	pycom09g19920 pycom17g28230
rosa_chinensis	RchiOBHm_Chr3g0485651
rosa_laevigata	RLG00000023137
rosa_multiflora	Rmu_co8410931.1_g000001
rosa_roxburghii	Rroxscaffold_6G00396550
rosa_rugosa	Rorug03G0220500
rosa_samantha	Rh3AG269400 Rh3BG305200 Rh3CG303500 Rh3DG299700
rosa_wichuraiana	Rw3G024010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	445, 1414
Acc36I	ACCTGC	2 cut(s)	445, 1414
AccB1I	GGYRCC	1 cut(s)	343
AccB7I	CCANNNNNTGG	1 cut(s)	1187
AccI	GTMKAC	1 cut(s)	291
AccII	CGCG	1 cut(s)	45
AciI	CCGC	4 cut(s)	11, 43, 1291, 2153
AclWI	GGATC	7 cut(s)	440, 453, 506, 715, 1269, 1282, 1343
AcsI	RAATTY	7 cut(s)	460, 604, 962, 1057, 1544, 1652, 2133
AcuI	CTGAAG	6 cut(s)	492, 704, 1953, 2007, 2016, 2309
AfaI	GTAC	6 cut(s)	478, 505, 1168, 1783, 2160, 2363
AfiI	CCNNNNNNNGG	4 cut(s)	932, 1187, 1655, 2103
AjnI	CCWGG	1 cut(s)	1584
AleI	CACNNNNGTG	1 cut(s)	734
Alw21I	GWGCWC	1 cut(s)	2342
Alw26I	GTCTC	5 cut(s)	52, 1102, 1758, 2190, 2438
AlwI	GGATC	7 cut(s)	440, 453, 506, 715, 1269, 1282, 1343
AoxI	GGCC	1 cut(s)	1912
ApeKI	GCWGC	7 cut(s)	143, 154, 419, 1901, 2150, 2167, 2170
ApoI	RAATTY	7 cut(s)	460, 604, 962, 1057, 1544, 1652, 2133
ArsI	GACNNNNNNTTYG	2 cut(s)	1126, 1158
AseI	ATTAAT	1 cut(s)	243
Asp700I	GAANNNNTTC	1 cut(s)	889
AspLEI	GCGC	1 cut(s)	2497
AspS9I	GGNCC	2 cut(s)	1142, 1178
AsuII	TTCGAA	1 cut(s)	1771
AvaII	GGWCC	2 cut(s)	1142, 1178
AxyI	CCTNAGG	1 cut(s)	927
BamHI	GGATCC	2 cut(s)	445, 1274
BanI	GGYRCC	1 cut(s)	343
BarI	GAAGNNNNNNTAC	2 cut(s)	1765, 1797
BauI	CACGAG	2 cut(s)	1449, 2420
BbsI	GAAGAC	3 cut(s)	528, 1304, 1596
Bbv12I	GWGCWC	1 cut(s)	2342
BbvI	GCAGC	7 cut(s)	130, 141, 406, 1888, 2137, 2157, 2179
BceAI	ACGGC	1 cut(s)	51
BciT130I	CCWGG	1 cut(s)	1586
BclI	TGATCA	1 cut(s)	967
BcoDI	GTCTC	5 cut(s)	52, 1102, 1758, 2190, 2438
BfaI	CTAG	5 cut(s)	255, 441, 1725, 2036, 2052
BfmI	CTRYAG	6 cut(s)	144, 682, 1068, 1425, 1842, 1902
BfuAI	ACCTGC	2 cut(s)	445, 1414
BisI	GCNGC	7 cut(s)	144, 155, 420, 1902, 2151, 2168, 2171
BlsI	GCNGC	7 cut(s)	145, 156, 421, 1903, 2152, 2169, 2172
BmcAI	AGTACT	2 cut(s)	478, 1783
Bme1390I	CCNGG	1 cut(s)	1586
Bme18I	GGWCC	2 cut(s)	1142, 1178
BmgT120I	GGNCC	2 cut(s)	1142, 1178
BmiI	GGNNCC	5 cut(s)	345, 447, 979, 1276, 2019
BmrFI	CCNGG	1 cut(s)	1586
BoxI	GACNNNNGTC	1 cut(s)	1304
BpiI	GAAGAC	3 cut(s)	528, 1304, 1596
BpmI	CTGGAG	3 cut(s)	124, 336, 2495
Bpu10I	CCTNAGC	1 cut(s)	996
Bpu14I	TTCGAA	1 cut(s)	1771
BpuEI	CTTGAG	2 cut(s)	1838, 1966
Bsa29I	ATCGAT	2 cut(s)	113, 275
BsaI	GGTCTC	2 cut(s)	1102, 2438
BsaJI	CCNNGG	3 cut(s)	324, 467, 1978
BsaWI	WCCGGW	1 cut(s)	1882
BsaXI	ACNNNNNCTCC	2 cut(s)	273, 303
Bsc4I	CCNNNNNNNGG	4 cut(s)	932, 1187, 1655, 2103
Bse1I	ACTGG	9 cut(s)	600, 643, 776, 1494, 1994, 2012, 2052, 2512, 2532
Bse21I	CCTNAGG	1 cut(s)	927
BseBI	CCWGG	1 cut(s)	1586
BseCI	ATCGAT	2 cut(s)	113, 275
BseDI	CCNNGG	3 cut(s)	324, 467, 1978
BseGI	GGATG	5 cut(s)	211, 247, 709, 1181, 2047
BseLI	CCNNNNNNNGG	4 cut(s)	932, 1187, 1655, 2103
BseMII	CTCAG	6 cut(s)	918, 932, 1314, 1634, 2201, 2236
BseNI	ACTGG	9 cut(s)	600, 643, 776, 1494, 1994, 2012, 2052, 2512, 2532
BseRI	GAGGAG	1 cut(s)	1762
BseXI	GCAGC	7 cut(s)	130, 141, 406, 1888, 2137, 2157, 2179
BsgI	GTGCAG	1 cut(s)	726
Bsh1236I	CGCG	1 cut(s)	45
BshFI	GGCC	1 cut(s)	1914
BshNI	GGYRCC	1 cut(s)	343
BshVI	ATCGAT	2 cut(s)	113, 275
BsiHKAI	GWGCWC	1 cut(s)	2342
BsiSI	CCGG	1 cut(s)	1883
BslFI	GGGAC	2 cut(s)	1632, 1955
BslI	CCNNNNNNNGG	4 cut(s)	932, 1187, 1655, 2103
BsmAI	GTCTC	5 cut(s)	52, 1102, 1758, 2190, 2438
BsmBI	CGTCTC	1 cut(s)	52
BsmFI	GGGAC	2 cut(s)	1632, 1955
BsmI	GAATGC	3 cut(s)	595, 2336, 2550
BsnI	GGCC	1 cut(s)	1914
Bso31I	GGTCTC	2 cut(s)	1102, 2438
Bsp119I	TTCGAA	1 cut(s)	1771
Bsp1286I	GDGCHC	1 cut(s)	2342
Bsp143I	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
Bsp19I	CCATGG	1 cut(s)	467
BspACI	CCGC	4 cut(s)	11, 43, 1291, 2153
BspANI	GGCC	1 cut(s)	1914
BspCNI	CTCAG	6 cut(s)	919, 931, 1315, 1635, 2200, 2235
BspDI	ATCGAT	2 cut(s)	113, 275
BspFNI	CGCG	1 cut(s)	45
BspHI	TCATGA	1 cut(s)	1483
BspLI	GGNNCC	5 cut(s)	345, 447, 979, 1276, 2019
BspMAI	CTGCAG	2 cut(s)	148, 1906
BspMI	ACCTGC	2 cut(s)	445, 1414
BspPI	GGATC	7 cut(s)	440, 453, 506, 715, 1269, 1282, 1343
BspQI	GCTCTTC	1 cut(s)	2256
BspT104I	TTCGAA	1 cut(s)	1771
BspT107I	GGYRCC	1 cut(s)	343
BspTNI	GGTCTC	2 cut(s)	1102, 2438
BsrI	ACTGG	9 cut(s)	600, 643, 776, 1494, 1994, 2012, 2052, 2512, 2532
BssECI	CCNNGG	3 cut(s)	324, 467, 1978
BssMI	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
BssSI	CACGAG	2 cut(s)	1449, 2420
BssT1I	CCWWGG	3 cut(s)	324, 467, 1978
Bst2BI	CACGAG	2 cut(s)	1449, 2420
Bst2UI	CCWGG	1 cut(s)	1586
Bst4CI	ACNGT	7 cut(s)	534, 814, 889, 985, 1759, 2179, 2386
Bst6I	CTCTTC	3 cut(s)	525, 1929, 2256
BstBI	TTCGAA	1 cut(s)	1771
BstDEI	CTNAG	9 cut(s)	918, 927, 996, 1323, 1365, 1643, 2187, 2222, 2555
BstDSI	CCRYGG	1 cut(s)	467
BstF5I	GGATG	5 cut(s)	211, 247, 709, 1181, 2047
BstFNI	CGCG	1 cut(s)	45
BstHHI	GCGC	1 cut(s)	2497
BstKTI	GATC	9 cut(s)	117, 448, 514, 710, 970, 1277, 1338, 1526, 1642
BstMAI	GTCTC	5 cut(s)	52, 1102, 1758, 2190, 2438
BstMBI	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
BstMWI	GCNNNNNNNGC	4 cut(s)	131, 140, 1605, 2422
BstNI	CCWGG	1 cut(s)	1586
BstPAI	GACNNNNGTC	1 cut(s)	1304
BstSCI	CCNGG	1 cut(s)	1584
BstSFI	CTRYAG	6 cut(s)	144, 682, 1068, 1425, 1842, 1902
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	7 cut(s)	130, 141, 406, 1888, 2137, 2157, 2179
BstV2I	GAAGAC	3 cut(s)	528, 1304, 1596
BstX2I	RGATCY	4 cut(s)	445, 511, 1274, 1335
BstXI	CCANNNNNNTGG	1 cut(s)	650
BstYI	RGATCY	4 cut(s)	445, 511, 1274, 1335
Bsu15I	ATCGAT	2 cut(s)	113, 275
Bsu36I	CCTNAGG	1 cut(s)	927
BsuRI	GGCC	1 cut(s)	1914
BsuTUI	ATCGAT	2 cut(s)	113, 275
BtgI	CCRYGG	1 cut(s)	467
BtgZI	GCGATG	1 cut(s)	1257
BtsCI	GGATG	5 cut(s)	211, 247, 709, 1181, 2047
BtsIMutI	CAGTG	4 cut(s)	42, 593, 717, 819
BveI	ACCTGC	2 cut(s)	445, 1414
CciI	TCATGA	1 cut(s)	1483
CfoI	GCGC	1 cut(s)	2497
Cfr13I	GGNCC	2 cut(s)	1142, 1178
ClaI	ATCGAT	2 cut(s)	113, 275
CseI	GACGC	1 cut(s)	34
Csp6I	GTAC	6 cut(s)	477, 504, 1167, 1782, 2159, 2362
CspCI	CAANNNNNGTGG	2 cut(s)	162, 197
CviAII	CATG	7 cut(s)	468, 524, 1256, 1331, 1463, 1484, 2498
CviQI	GTAC	6 cut(s)	477, 504, 1167, 1782, 2159, 2362
DdeI	CTNAG	9 cut(s)	918, 927, 996, 1323, 1365, 1643, 2187, 2222, 2555
DpnI	GATC	9 cut(s)	116, 447, 513, 709, 969, 1276, 1337, 1525, 1641
DpnII	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
DraI	TTTAAA	1 cut(s)	948
Eam1104I	CTCTTC	3 cut(s)	525, 1929, 2256
EarI	CTCTTC	3 cut(s)	525, 1929, 2256
Eco130I	CCWWGG	3 cut(s)	324, 467, 1978
Eco31I	GGTCTC	2 cut(s)	1102, 2438
Eco32I	GATATC	1 cut(s)	273
Eco47I	GGWCC	2 cut(s)	1142, 1178
Eco57I	CTGAAG	6 cut(s)	492, 704, 1953, 2007, 2016, 2309
Eco81I	CCTNAGG	1 cut(s)	927
EcoRI	GAATTC	1 cut(s)	460
EcoRII	CCWGG	1 cut(s)	1584
EcoRV	GATATC	1 cut(s)	273
EcoT14I	CCWWGG	3 cut(s)	324, 467, 1978
EcoT22I	ATGCAT	1 cut(s)	1039
ErhI	CCWWGG	3 cut(s)	324, 467, 1978
Esp3I	CGTCTC	1 cut(s)	52
FaeI	CATG	7 cut(s)	471, 527, 1259, 1334, 1466, 1487, 2501
FalI	AAGNNNNNCTT	4 cut(s)	650, 682, 1899, 1931
FaqI	GGGAC	2 cut(s)	1632, 1955
FatI	CATG	7 cut(s)	467, 523, 1255, 1330, 1462, 1483, 2497
FauI	CCCGC	1 cut(s)	18
FauNDI	CATATG	1 cut(s)	2163
FbaI	TGATCA	1 cut(s)	967
FblI	GTMKAC	1 cut(s)	291
Fnu4HI	GCNGC	7 cut(s)	144, 155, 420, 1902, 2151, 2168, 2171
FokI	GGATG	5 cut(s)	218, 234, 716, 1168, 2054
Fsp4HI	GCNGC	7 cut(s)	144, 155, 420, 1902, 2151, 2168, 2171
FspBI	CTAG	5 cut(s)	255, 441, 1725, 2036, 2052
GlaI	GCGC	1 cut(s)	2496
GluI	GCNGC	7 cut(s)	144, 155, 420, 1902, 2151, 2168, 2171
GsuI	CTGGAG	3 cut(s)	124, 336, 2495
HaeIII	GGCC	1 cut(s)	1914
HapII	CCGG	1 cut(s)	1883
HgaI	GACGC	1 cut(s)	34
HhaI	GCGC	1 cut(s)	2497
Hin1II	CATG	7 cut(s)	471, 527, 1259, 1334, 1466, 1487, 2501
Hin6I	GCGC	1 cut(s)	2495
HinP1I	GCGC	1 cut(s)	2495
HindIII	AAGCTT	3 cut(s)	866, 1606, 2414
HpaII	CCGG	1 cut(s)	1883
Hpy166II	GTNNAC	4 cut(s)	292, 335, 2070, 2362
Hpy8I	GTNNAC	4 cut(s)	292, 335, 2070, 2362
Hpy99I	CGWCG	1 cut(s)	72
HpyAV	CCTTC	6 cut(s)	694, 1352, 1925, 1955, 2031, 2342
HpyCH4III	ACNGT	7 cut(s)	534, 814, 889, 985, 1759, 2179, 2386
HpyF10VI	GCNNNNNNNGC	4 cut(s)	131, 140, 1605, 2422
HpyF3I	CTNAG	9 cut(s)	918, 927, 996, 1323, 1365, 1643, 2187, 2222, 2555
Hsp92II	CATG	7 cut(s)	471, 527, 1259, 1334, 1466, 1487, 2501
HspAI	GCGC	1 cut(s)	2495
Ksp22I	TGATCA	1 cut(s)	967
Kzo9I	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
LguI	GCTCTTC	1 cut(s)	2256
LmnI	GCTCC	3 cut(s)	403, 2337, 2514
Lsp1109I	GCAGC	7 cut(s)	130, 141, 406, 1888, 2137, 2157, 2179
MaeI	CTAG	5 cut(s)	255, 441, 1725, 2036, 2052
MalI	GATC	9 cut(s)	116, 447, 513, 709, 969, 1276, 1337, 1525, 1641
MboI	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
MfeI	CAATTG	3 cut(s)	220, 2276, 2439
MflI	RGATCY	4 cut(s)	445, 511, 1274, 1335
MhlI	GDGCHC	1 cut(s)	2342
MlyI	GAGTC	6 cut(s)	327, 1334, 1363, 1654, 1786, 2192
MmeI	TCCRAC	1 cut(s)	1169
Mph1103I	ATGCAT	1 cut(s)	1039
MroXI	GAANNNNTTC	1 cut(s)	889
MseI	TTAA	7 cut(s)	243, 947, 1548, 1662, 2091, 2138, 2376
MslI	CAYNNNNRTG	1 cut(s)	734
MspA1I	CMGCKG	3 cut(s)	143, 419, 2170
MspI	CCGG	1 cut(s)	1883
MspR9I	CCNGG	1 cut(s)	1586
MunI	CAATTG	3 cut(s)	220, 2276, 2439
Mva1269I	GAATGC	3 cut(s)	595, 2336, 2550
MvaI	CCWGG	1 cut(s)	1586
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	4 cut(s)	131, 140, 1605, 2422
NcoI	CCATGG	1 cut(s)	467
NdeI	CATATG	1 cut(s)	2163
NdeII	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
NlaIII	CATG	7 cut(s)	471, 527, 1259, 1334, 1466, 1487, 2501
NlaIV	GGNNCC	5 cut(s)	345, 447, 979, 1276, 2019
NmuCI	GTSAC	7 cut(s)	136, 319, 412, 736, 808, 1114, 2479
NsiI	ATGCAT	1 cut(s)	1039
NspV	TTCGAA	1 cut(s)	1771
OliI	CACNNNNGTG	1 cut(s)	734
PagI	TCATGA	1 cut(s)	1483
PaqCI	CACCTGC	2 cut(s)	445, 1414
PciSI	GCTCTTC	1 cut(s)	2256
PctI	GAATGC	3 cut(s)	595, 2336, 2550
PdmI	GAANNNNTTC	1 cut(s)	889
PflMI	CCANNNNNTGG	1 cut(s)	1187
PkrI	GCNGC	7 cut(s)	145, 156, 421, 1903, 2152, 2169, 2172
PleI	GAGTC	6 cut(s)	326, 1333, 1363, 1653, 1786, 2191
PpsI	GAGTC	6 cut(s)	326, 1333, 1363, 1653, 1786, 2191
PshAI	GACNNNNGTC	1 cut(s)	1304
PshBI	ATTAAT	1 cut(s)	243
Psp6I	CCWGG	1 cut(s)	1584
PspGI	CCWGG	1 cut(s)	1584
PspN4I	GGNNCC	5 cut(s)	345, 447, 979, 1276, 2019
PspPI	GGNCC	2 cut(s)	1142, 1178
PstI	CTGCAG	2 cut(s)	148, 1906
PsuI	RGATCY	4 cut(s)	445, 511, 1274, 1335
PvuII	CAGCTG	3 cut(s)	143, 419, 2170
RsaI	GTAC	6 cut(s)	478, 505, 1168, 1783, 2160, 2363
RsaNI	GTAC	6 cut(s)	477, 504, 1167, 1782, 2159, 2362
RseI	CAYNNNNRTG	1 cut(s)	734
SapI	GCTCTTC	1 cut(s)	2256
SaqAI	TTAA	7 cut(s)	243, 947, 1548, 1662, 2091, 2138, 2376
SatI	GCNGC	7 cut(s)	144, 155, 420, 1902, 2151, 2168, 2171
Sau3AI	GATC	9 cut(s)	114, 445, 511, 707, 967, 1274, 1335, 1523, 1639
Sau96I	GGNCC	2 cut(s)	1142, 1178
ScaI	AGTACT	2 cut(s)	478, 1783
SchI	GAGTC	6 cut(s)	327, 1334, 1363, 1654, 1786, 2192
ScrFI	CCNGG	1 cut(s)	1586
SduI	GDGCHC	1 cut(s)	2342
SfcI	CTRYAG	6 cut(s)	144, 682, 1068, 1425, 1842, 1902
SfuI	TTCGAA	1 cut(s)	1771
SinI	GGWCC	2 cut(s)	1142, 1178
SmiI	ATTTAAAT	1 cut(s)	948
SmiMI	CAYNNNNRTG	1 cut(s)	734
SmlI	CTYRAG	2 cut(s)	1853, 1945
SmoI	CTYRAG	2 cut(s)	1853, 1945
SsiI	CCGC	4 cut(s)	11, 43, 1291, 2153
SspI	AATATT	2 cut(s)	1099, 1501
SspMI	CTAG	5 cut(s)	255, 441, 1725, 2036, 2052
StyD4I	CCNGG	1 cut(s)	1584
StyI	CCWWGG	3 cut(s)	324, 467, 1978
SwaI	ATTTAAAT	1 cut(s)	948
TaaI	ACNGT	7 cut(s)	534, 814, 889, 985, 1759, 2179, 2386
TaqI	TCGA	4 cut(s)	113, 263, 275, 1771
TatI	WGTACW	3 cut(s)	476, 1166, 1781
Tru1I	TTAA	7 cut(s)	243, 947, 1548, 1662, 2091, 2138, 2376
Tru9I	TTAA	7 cut(s)	243, 947, 1548, 1662, 2091, 2138, 2376
TscAI	CASTG	4 cut(s)	42, 600, 717, 819
TseFI	GTSAC	7 cut(s)	136, 319, 412, 736, 808, 1114, 2479
TseI	GCWGC	7 cut(s)	143, 154, 419, 1901, 2150, 2167, 2170
Tsp45I	GTSAC	7 cut(s)	136, 319, 412, 736, 808, 1114, 2479
TspDTI	ATGAA	7 cut(s)	13, 512, 878, 1113, 1500, 1833, 1911
TspGWI	ACGGA	1 cut(s)	776
TspRI	CASTG	4 cut(s)	42, 600, 717, 819
Van91I	CCANNNNNTGG	1 cut(s)	1187
VpaK11BI	GGWCC	2 cut(s)	1142, 1178
VspI	ATTAAT	1 cut(s)	243
XapI	RAATTY	7 cut(s)	460, 604, 962, 1057, 1544, 1652, 2133
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1592
XmiI	GTMKAC	1 cut(s)	291
XmnI	GAANNNNTTC	1 cut(s)	889
XspI	CTAG	5 cut(s)	255, 441, 1725, 2036, 2052
ZrmI	AGTACT	2 cut(s)	478, 1783
Zsp2I	ATGCAT	1 cut(s)	1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.