Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004178

Physical Location & Seq

Genomic Coordinates Reverse (-)

126884 .. 133630

Gene Structure 6747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G001600.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGTCGGTTGATACACGACGATATTTACGGGATGACCAAACAAGCAATTGTCGGAGTTTTGGAAGCATTAATCATCCCTCTAGCCAATCGAGAAAGATATCCATTGGAATTATGGTAGACCAATTAGCCAAGAAAAAGTCTGGAGTCACAAAGGAAGGGGAGGTTGTGGTGCCAAATGCAGAAATGGAAAAATCTAACTTAGGAAATATCACACAGGGAAAAAACAAGAAGGAAGAATTCACAGCTTCCAAGAAAGCAAAACAAACTAAGGATCCACAGCAGGTGAATTCCCCATGGATTACTACTACATCATTCCACCAGAAAATGCGGACTTCAGATACCGTTCTTCATGCAAAACAATATTCTAATTTGCCATCTGGTAGTGGGAAGCAGTACAAACTTGATGGAGCAAGGAATGCACCACTTACATATTCTGTTCAGTTTTTTGCAAACCAAACCTCGTTTTTGGAGTCGGATGGTAAGAAACAGAATAACTTTGATAGAGTTAACTACCAAAAGAAGGAAGTGAAGGATAGAGCAGTGGAGGTCCAAGATTTCACATTTGAGACTGCGAAGGAAGTCATAATGTCGGATAAGGAGGTGCTAGTGGATAAAGCAGTTGCAACAGAAGGCAGAAGAACTGAAACTCTCAGAATGAAGCTTTGGGAGATTTTGGGAACTGTTTCTTCACCAGATGATCAGCGTTCCAAATCTCAGCTTCATAAGGTTGGTGACGATAAATTAAATCCACAGCAGGAATTTGATCAAATGGGTGCCACAGTTGTCAAGTCCAAGCAGAATTCTGATAGACCAGGGCAAAAATATGATGAAAAGGGTGATGCATCTATCAATCCAAGACAAAATTCAGATACTATAGAAATGGATTCTGAAAGTCCTGATAATATTGTCAGGAGACCAGTGACTCGTTCTTTGAGCCGAAAGAGAGCTCCAACTAAAAAACAACATAGAACTGCAACAAATGGTCCATCCCCTGGTTACAAAATGAAACATAGAGAGGACAGCATATTTTCTTTTGAAGAATGCTGCGAAAAACTACATGGTTCTTTTGCTGGTGGATCCTCAAAGTCTACACGGAAGAAGAGAGAGAACAAAAGTTTCAGAACTGAGTTTCCTGGGATCTGCCTTCCGGAAAAGGATAAGTCAACTAAGATTCAGCAACCAATTAATAGGAGTGAAACACCATCACCTGCTAAGCAAGCTACTTCTGTAGATAAGACAATGGGAAATTTTCATGGTTGCCTACCTGAGAATGAAAGAGAGTATCTTGAACTGGAGAAGAATATCCAAGAGCAAGAAATCTATCAATCACCACTGACCACCAAGAAATTTAAACGAGACTTTGACACTCTAGAAAATAAAGACCAACATGAAGAAGACAATGGCAATCCAAGCTTGAAGAATGATGCTAATCCAGAAGATGATTATCTAAGTCCAACATTTGGAATTAAAACACCTGTGTCAAGCTCTTCTCCTAGCTCAATCCCAAAATCAGACCATGTTAGTAGTCCTGCACAATCAGAGAGGAGATTTACTGTGGGAGATATTCATAGTTTCAGGACTTTCTGGACTTCAAAACAAGATTTTTGTGATAATGGACAAACAAAATCTTCTGATACTGTGGAAGAGGAACTCAAGGATTCTCCGTTGAGAAAAACAGCAGCTGACGTGGAAGAAAATGATGCAGAAGATGGCCTGTTTTTATCATCATCTGAAGAGAGAGACTTGGGGAGTTGTGAAGAAGGTTCTCCCATTATCCACGGACATGACTGGACTGGAGAAGATAATTGGATAGAGGAACCTTCAGAGCCTAACCAAGTTGATGGACTGGCTAGGGCTGTTGAACTGTTTGCCTTGGAATTAGAAAAACTTAAAACCAAATTGAGGTCAGCAACTAATAGGAAATCCTCTGAAATTCTGATGTCTGTTGCCGGGGAGGTACATATGCAGCTGCAGAATGTTGAGTCTCAGATTCAAACGGATGTGGGAAAGCTCACAAACCTCAGTAAATCAAAGAGAAAAAGGCTGGAATCAAGGTTTGAGGATTTTATAGAGCAACAAGAACACTTGAAAGTGATTTATGACAAATTCAAGGAACAGGTCAATCAGCATCTTCAAGATTGCAGAAGCACATTTGAAGGGCTGGACGTGTACCAGACAGAGTTCAAGGGAACCGTGGAAAAGCAAAAAGCATCACACAGAAAGCTTCTGTTGCAAGTGGAAGAAGCAATTGAGACTCAACTCAATGATGCCCAAGGAAGAATCCAAGTCATGCAAGAGATGGGACGTGGGAAGATGCTCCAGTTGAAACACGAACTGGCTTTGTGTTTGAAAGAGGGTATTCTAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0007049 GO:0008150 GO:0009987 GO:0010564 GO:0022414 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0040020 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044087 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051321 GO:0051445 GO:0051726 GO:0051783 GO:0051983 GO:0060629 GO:0060631 GO:0065007 GO:0070013 GO:0090173 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

790

Amino Acids

89.45

Weight (kDa)

6.47

Isoelectric Point (pI)

56.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004178)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT5G20995
fragaria_vesca	FvH4_1g26160 FvH4_1g26160 FvH4_4g08230
malus_domestica	MD09G1291300.v1.1 MD17G1286100.v1.1
prunus_persica	Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1
pyrus_communis	pycom09g19920 pycom17g28230
rosa_chinensis	RchiOBHm_Chr3g0485651
rosa_laevigata	RLG00000023137
rosa_multiflora	Rmu_co8410931.1_g000001
rosa_roxburghii	Rroxscaffold_6G00396550
rosa_rugosa	Rorug03G0220500
rosa_samantha	Rh3AG269400 Rh3BG305200 Rh3CG303500 Rh3DG299700
rosa_wichuraiana	Rw3G024010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	271, 1216
Acc36I	ACCTGC	2 cut(s)	271, 1216
AccB1I	GGYRCC	2 cut(s)	169, 773
AccB7I	CCANNNNNTGG	2 cut(s)	992, 1460
AccI	GTMKAC	2 cut(s)	117, 1088
AccIII	TCCGGA	1 cut(s)	1147
AciI	CCGC	1 cut(s)	328
AclWI	GGATC	5 cut(s)	266, 279, 1071, 1084, 1145
AcsI	RAATTY	9 cut(s)	236, 286, 758, 799, 862, 1246, 1346, 1932, 2105
AcuI	CTGAAG	3 cut(s)	318, 1752, 1806
AfaI	GTAC	3 cut(s)	395, 1959, 2171
AfiI	CCNNNNNNNGG	4 cut(s)	520, 992, 1460, 1902
AflIII	ACRYGT	1 cut(s)	2166
AjiI	CACGTC	3 cut(s)	1687, 2167, 2306
AjnI	CCWGG	3 cut(s)	811, 991, 1132
AjuI	GAANNNNNNNTTGG	4 cut(s)	646, 678, 847, 879
AloI	GAACNNNNNNTCC	2 cut(s)	1114, 1146
Alw21I	GWGCWC	1 cut(s)	949
Alw26I	GTCTC	6 cut(s)	560, 907, 1350, 1734, 1989, 2246
AlwI	GGATC	5 cut(s)	266, 279, 1071, 1084, 1145
AlwNI	CAGNNNCTG	1 cut(s)	1682
Aor13HI	TCCGGA	1 cut(s)	1147
AoxI	GGCC	1 cut(s)	1711
ApeKI	GCWGC	4 cut(s)	1044, 1679, 1966, 1969
ApoI	RAATTY	9 cut(s)	236, 286, 758, 799, 862, 1246, 1346, 1932, 2105
ArsI	GACNNNNNNTTYG	2 cut(s)	913, 945
AseI	ATTAAT	2 cut(s)	69, 1185
Asp700I	GAANNNNTTC	1 cut(s)	682
AspS9I	GGNCC	2 cut(s)	547, 983
AsuC2I	CCSGG	1 cut(s)	1951
AsuHPI	GGTGA	6 cut(s)	295, 681, 743, 848, 1197, 1320
AvaII	GGWCC	2 cut(s)	547, 983
BamHI	GGATCC	2 cut(s)	271, 1076
BanI	GGYRCC	2 cut(s)	169, 773
BanII	GRGCYC	1 cut(s)	949
BbsI	GAAGAC	1 cut(s)	1401
Bbv12I	GWGCWC	1 cut(s)	949
BbvI	GCAGC	4 cut(s)	1031, 1691, 1956, 1978
BccI	CCATC	8 cut(s)	382, 398, 470, 994, 1210, 1703, 1835, 2293
BciT130I	CCWGG	3 cut(s)	813, 993, 1134
BclI	TGATCA	2 cut(s)	697, 763
BcnI	CCSGG	1 cut(s)	1951
BcoDI	GTCTC	6 cut(s)	560, 907, 1350, 1734, 1989, 2246
BfaI	CTAG	5 cut(s)	81, 605, 1370, 1494, 1851
BfmI	CTRYAG	3 cut(s)	873, 1227, 1970
BfuAI	ACCTGC	2 cut(s)	271, 1216
BisI	GCNGC	4 cut(s)	1045, 1680, 1967, 1970
BlpI	GCTNAGC	1 cut(s)	1212
BlsI	GCNGC	4 cut(s)	1046, 1681, 1968, 1971
Bme1390I	CCNGG	4 cut(s)	813, 993, 1134, 1951
Bme18I	GGWCC	2 cut(s)	547, 983
BmgBI	CACGTC	3 cut(s)	1687, 2167, 2306
BmgT120I	GGNCC	2 cut(s)	547, 983
BmiI	GGNNCC	6 cut(s)	171, 273, 775, 1078, 1818, 2191
BmrFI	CCNGG	4 cut(s)	813, 993, 1134, 1951
BmsI	GCATC	8 cut(s)	829, 851, 1414, 1690, 2137, 2219, 2257, 2304
BpiI	GAAGAC	1 cut(s)	1401
BpmI	CTGGAG	4 cut(s)	162, 1313, 1815, 2303
Bpu1102I	GCTNAGC	1 cut(s)	1212
BpuEI	CTTGAG	1 cut(s)	1637
BpuMI	CCSGG	1 cut(s)	1951
BsaBI	GATNNNNATC	2 cut(s)	1428, 1443
BsaI	GGTCTC	1 cut(s)	907
BsaJI	CCNNGG	9 cut(s)	293, 812, 991, 1133, 1777, 1872, 1950, 2193, 2272
BsaWI	WCCGGW	1 cut(s)	1147
Bsc4I	CCNNNNNNNGG	4 cut(s)	520, 992, 1460, 1902
Bse1I	ACTGG	7 cut(s)	917, 1296, 1793, 1798, 1851, 2320, 2340
Bse8I	GATNNNNATC	2 cut(s)	1428, 1443
BseAI	TCCGGA	1 cut(s)	1147
BseBI	CCWGG	3 cut(s)	813, 993, 1134
BseDI	CCNNGG	9 cut(s)	293, 812, 991, 1133, 1777, 1872, 1950, 2193, 2272
BseGI	GGATG	5 cut(s)	37, 73, 481, 986, 2005
BseJI	GATNNNNATC	2 cut(s)	1428, 1443
BseLI	CCNNNNNNNGG	4 cut(s)	520, 992, 1460, 1902
BseMII	CTCAG	6 cut(s)	664, 728, 1116, 1257, 2000, 2035
BseNI	ACTGG	7 cut(s)	917, 1296, 1793, 1798, 1851, 2320, 2340
BseRI	GAGGAG	1 cut(s)	1558
BseXI	GCAGC	4 cut(s)	1031, 1691, 1956, 1978
BsgI	GTGCAG	1 cut(s)	1515
BshFI	GGCC	1 cut(s)	1713
BshNI	GGYRCC	2 cut(s)	169, 773
BsiHKAI	GWGCWC	1 cut(s)	949
BsiSI	CCGG	2 cut(s)	1148, 1950
BslFI	GGGAC	1 cut(s)	2316
BslI	CCNNNNNNNGG	4 cut(s)	520, 992, 1460, 1902
BsmAI	GTCTC	6 cut(s)	560, 907, 1350, 1734, 1989, 2246
BsmFI	GGGAC	1 cut(s)	2316
BsmI	GAATGC	2 cut(s)	421, 1046
BsnI	GGCC	1 cut(s)	1713
Bso31I	GGTCTC	1 cut(s)	907
Bsp1286I	GDGCHC	1 cut(s)	949
Bsp13I	TCCGGA	1 cut(s)	1147
Bsp143I	GATC	5 cut(s)	271, 697, 763, 1076, 1137
Bsp1720I	GCTNAGC	1 cut(s)	1212
Bsp19I	CCATGG	1 cut(s)	293
BspACI	CCGC	1 cut(s)	328
BspANI	GGCC	1 cut(s)	1713
BspCNI	CTCAG	6 cut(s)	663, 727, 1117, 1258, 1999, 2034
BspEI	TCCGGA	1 cut(s)	1147
BspLI	GGNNCC	6 cut(s)	171, 273, 775, 1078, 1818, 2191
BspMAI	CTGCAG	1 cut(s)	1974
BspMI	ACCTGC	2 cut(s)	271, 1216
BspPI	GGATC	5 cut(s)	266, 279, 1071, 1084, 1145
BspQI	GCTCTTC	1 cut(s)	1492
BspT107I	GGYRCC	2 cut(s)	169, 773
BspTNI	GGTCTC	1 cut(s)	907
BsrI	ACTGG	7 cut(s)	917, 1296, 1793, 1798, 1851, 2320, 2340
BssECI	CCNNGG	9 cut(s)	293, 812, 991, 1133, 1777, 1872, 1950, 2193, 2272
BssMI	GATC	5 cut(s)	271, 697, 763, 1076, 1137
BssT1I	CCWWGG	3 cut(s)	293, 1872, 2272
Bst2UI	CCWGG	3 cut(s)	813, 993, 1134
Bst4CI	ACNGT	7 cut(s)	343, 682, 781, 1555, 1639, 1866, 2194
Bst6I	CTCTTC	4 cut(s)	1094, 1492, 1638, 1728
BstAPI	GCANNNNNTGC	1 cut(s)	416
BstC8I	GCNNGC	1 cut(s)	1218
BstDSI	CCRYGG	3 cut(s)	293, 1777, 2193
BstF5I	GGATG	5 cut(s)	37, 73, 481, 986, 2005
BstKTI	GATC	5 cut(s)	274, 700, 766, 1079, 1140
BstMAI	GTCTC	6 cut(s)	560, 907, 1350, 1734, 1989, 2246
BstMBI	GATC	5 cut(s)	271, 697, 763, 1076, 1137
BstMWI	GCNNNNNNNGC	4 cut(s)	416, 1217, 1410, 2230
BstNI	CCWGG	3 cut(s)	813, 993, 1134
BstSCI	CCNGG	4 cut(s)	811, 991, 1132, 1949
BstSFI	CTRYAG	3 cut(s)	873, 1227, 1970
BstV1I	GCAGC	4 cut(s)	1031, 1691, 1956, 1978
BstV2I	GAAGAC	1 cut(s)	1401
BstX2I	RGATCY	3 cut(s)	271, 1076, 1137
BstXI	CCANNNNNNTGG	1 cut(s)	1841
BstYI	RGATCY	3 cut(s)	271, 1076, 1137
BsuRI	GGCC	1 cut(s)	1713
BtgI	CCRYGG	3 cut(s)	293, 1777, 2193
BtrI	CACGTC	3 cut(s)	1687, 2167, 2306
BtsCI	GGATG	5 cut(s)	37, 73, 481, 986, 2005
BtsI	GCAGTG	1 cut(s)	546
BtsIMutI	CAGTG	3 cut(s)	546, 924, 1331
BveI	ACCTGC	2 cut(s)	271, 1216
Cac8I	GCNNGC	1 cut(s)	1218
CaiI	CAGNNNCTG	1 cut(s)	1682
Cfr13I	GGNCC	2 cut(s)	547, 983
Csp6I	GTAC	3 cut(s)	394, 1958, 2170
CviAII	CATG	8 cut(s)	294, 350, 1058, 1253, 1388, 1517, 1784, 2290
CviQI	GTAC	3 cut(s)	394, 1958, 2170
DpnI	GATC	5 cut(s)	273, 699, 765, 1078, 1139
DpnII	GATC	5 cut(s)	271, 697, 763, 1076, 1137
DraI	TTTAAA	1 cut(s)	1351
Eam1104I	CTCTTC	4 cut(s)	1094, 1492, 1638, 1728
EarI	CTCTTC	4 cut(s)	1094, 1492, 1638, 1728
Ecl136II	GAGCTC	1 cut(s)	947
Eco130I	CCWWGG	3 cut(s)	293, 1872, 2272
Eco24I	GRGCYC	1 cut(s)	949
Eco31I	GGTCTC	1 cut(s)	907
Eco32I	GATATC	1 cut(s)	99
Eco47I	GGWCC	2 cut(s)	547, 983
Eco53kI	GAGCTC	1 cut(s)	947
Eco57I	CTGAAG	3 cut(s)	318, 1752, 1806
EcoICRI	GAGCTC	1 cut(s)	947
EcoRI	GAATTC	3 cut(s)	236, 286, 799
EcoRII	CCWGG	3 cut(s)	811, 991, 1132
EcoRV	GATATC	1 cut(s)	99
EcoT14I	CCWWGG	3 cut(s)	293, 1872, 2272
EcoT22I	ATGCAT	1 cut(s)	844
EcoT38I	GRGCYC	1 cut(s)	949
ErhI	CCWWGG	3 cut(s)	293, 1872, 2272
FaeI	CATG	8 cut(s)	297, 353, 1061, 1256, 1391, 1520, 1787, 2293
FaqI	GGGAC	1 cut(s)	2316
FatI	CATG	8 cut(s)	293, 349, 1057, 1252, 1387, 1516, 1783, 2289
FauNDI	CATATG	1 cut(s)	1962
FbaI	TGATCA	2 cut(s)	697, 763
FblI	GTMKAC	2 cut(s)	117, 1088
Fnu4HI	GCNGC	4 cut(s)	1045, 1680, 1967, 1970
FokI	GGATG	5 cut(s)	44, 60, 488, 973, 2012
FriOI	GRGCYC	1 cut(s)	949
Fsp4HI	GCNGC	4 cut(s)	1045, 1680, 1967, 1970
FspBI	CTAG	5 cut(s)	81, 605, 1370, 1494, 1851
GluI	GCNGC	4 cut(s)	1045, 1680, 1967, 1970
GsuI	CTGGAG	4 cut(s)	162, 1313, 1815, 2303
HaeIII	GGCC	1 cut(s)	1713
HapII	CCGG	2 cut(s)	1148, 1950
Hin1II	CATG	8 cut(s)	297, 353, 1061, 1256, 1391, 1520, 1787, 2293
HincII	GTYRAC	2 cut(s)	508, 1164
HindII	GTYRAC	2 cut(s)	508, 1164
HindIII	AAGCTT	3 cut(s)	659, 1411, 2222
HpaI	GTTAAC	1 cut(s)	508
HpaII	CCGG	2 cut(s)	1148, 1950
HphI	GGTGA	6 cut(s)	295, 681, 743, 848, 1197, 1320
Hpy166II	GTNNAC	5 cut(s)	118, 508, 1089, 1164, 2170
Hpy8I	GTNNAC	5 cut(s)	118, 508, 1089, 1164, 2170
Hpy99I	CGWCG	1 cut(s)	21
HpyCH4III	ACNGT	7 cut(s)	343, 682, 781, 1555, 1639, 1866, 2194
HpyCH4IV	ACGT	3 cut(s)	1686, 2166, 2305
HpyF10VI	GCNNNNNNNGC	4 cut(s)	416, 1217, 1410, 2230
HpySE526I	ACGT	3 cut(s)	1686, 2166, 2305
Hsp92II	CATG	8 cut(s)	297, 353, 1061, 1256, 1391, 1520, 1787, 2293
Kpn2I	TCCGGA	1 cut(s)	1147
Ksp22I	TGATCA	2 cut(s)	697, 763
KspAI	GTTAAC	1 cut(s)	508
Kzo9I	GATC	5 cut(s)	271, 697, 763, 1076, 1137
LguI	GCTCTTC	1 cut(s)	1492
LmnI	GCTCC	3 cut(s)	407, 952, 2322
Lsp1109I	GCAGC	4 cut(s)	1031, 1691, 1956, 1978
LweI	GCATC	8 cut(s)	829, 851, 1414, 1690, 2137, 2219, 2257, 2304
MaeI	CTAG	5 cut(s)	81, 605, 1370, 1494, 1851
MaeII	ACGT	3 cut(s)	1686, 2166, 2305
MaeIII	GTNAC	4 cut(s)	145, 731, 919, 995
MalI	GATC	5 cut(s)	273, 699, 765, 1078, 1139
MboI	GATC	5 cut(s)	271, 697, 763, 1076, 1137
MfeI	CAATTG	2 cut(s)	46, 2247
MflI	RGATCY	3 cut(s)	271, 1076, 1137
MhlI	GDGCHC	1 cut(s)	949
MlyI	GAGTC	5 cut(s)	153, 479, 916, 1991, 2248
MmeI	TCCRAC	5 cut(s)	32, 453, 570, 974, 1478
Mph1103I	ATGCAT	1 cut(s)	844
MroI	TCCGGA	1 cut(s)	1147
MroXI	GAANNNNTTC	1 cut(s)	682
MseI	TTAA	7 cut(s)	69, 507, 743, 1185, 1350, 1467, 1890
MslI	CAYNNNNRTG	1 cut(s)	1782
MspA1I	CMGCKG	2 cut(s)	1682, 1969
MspI	CCGG	2 cut(s)	1148, 1950
MspR9I	CCNGG	4 cut(s)	813, 993, 1134, 1951
MunI	CAATTG	2 cut(s)	46, 2247
Mva1269I	GAATGC	2 cut(s)	421, 1046
MvaI	CCWGG	3 cut(s)	813, 993, 1134
MwoI	GCNNNNNNNGC	4 cut(s)	416, 1217, 1410, 2230
NciI	CCSGG	1 cut(s)	1951
NcoI	CCATGG	1 cut(s)	293
NdeI	CATATG	1 cut(s)	1962
NdeII	GATC	5 cut(s)	271, 697, 763, 1076, 1137
NlaIII	CATG	8 cut(s)	297, 353, 1061, 1256, 1391, 1520, 1787, 2293
NlaIV	GGNNCC	6 cut(s)	171, 273, 775, 1078, 1818, 2191
NmuCI	GTSAC	3 cut(s)	145, 731, 919
NsiI	ATGCAT	1 cut(s)	844
PaqCI	CACCTGC	2 cut(s)	271, 1216
PciSI	GCTCTTC	1 cut(s)	1492
PctI	GAATGC	2 cut(s)	421, 1046
PdmI	GAANNNNTTC	1 cut(s)	682
PfeI	GAWTC	6 cut(s)	884, 1171, 1658, 1990, 2048, 2280
PflMI	CCANNNNNTGG	2 cut(s)	992, 1460
PkrI	GCNGC	4 cut(s)	1046, 1681, 1968, 1971
PleI	GAGTC	5 cut(s)	152, 478, 916, 1990, 2248
PpsI	GAGTC	5 cut(s)	152, 478, 916, 1990, 2248
PshBI	ATTAAT	2 cut(s)	69, 1185
Psp124BI	GAGCTC	1 cut(s)	949
Psp6I	CCWGG	3 cut(s)	811, 991, 1132
PspGI	CCWGG	3 cut(s)	811, 991, 1132
PspN4I	GGNNCC	6 cut(s)	171, 273, 775, 1078, 1818, 2191
PspPI	GGNCC	2 cut(s)	547, 983
PstI	CTGCAG	1 cut(s)	1974
PstNI	CAGNNNCTG	1 cut(s)	1682
PsuI	RGATCY	3 cut(s)	271, 1076, 1137
PvuII	CAGCTG	2 cut(s)	1682, 1969
RsaI	GTAC	3 cut(s)	395, 1959, 2171
RsaNI	GTAC	3 cut(s)	394, 1958, 2170
RseI	CAYNNNNRTG	1 cut(s)	1782
SacI	GAGCTC	1 cut(s)	949
SapI	GCTCTTC	1 cut(s)	1492
SaqAI	TTAA	7 cut(s)	69, 507, 743, 1185, 1350, 1467, 1890
SatI	GCNGC	4 cut(s)	1045, 1680, 1967, 1970
Sau3AI	GATC	5 cut(s)	271, 697, 763, 1076, 1137
Sau96I	GGNCC	2 cut(s)	547, 983
SchI	GAGTC	5 cut(s)	153, 479, 916, 1991, 2248
ScrFI	CCNGG	4 cut(s)	813, 993, 1134, 1951
SduI	GDGCHC	1 cut(s)	949
SfaNI	GCATC	8 cut(s)	829, 851, 1414, 1690, 2137, 2219, 2257, 2304
SfcI	CTRYAG	3 cut(s)	873, 1227, 1970
SinI	GGWCC	2 cut(s)	547, 983
SmiMI	CAYNNNNRTG	1 cut(s)	1782
SmlI	CTYRAG	1 cut(s)	1652
SmoI	CTYRAG	1 cut(s)	1652
SsiI	CCGC	1 cut(s)	328
SspI	AATATT	2 cut(s)	362, 904
SspMI	CTAG	5 cut(s)	81, 605, 1370, 1494, 1851
SstI	GAGCTC	1 cut(s)	949
StyD4I	CCNGG	4 cut(s)	811, 991, 1132, 1949
StyI	CCWWGG	3 cut(s)	293, 1872, 2272
TaaI	ACNGT	7 cut(s)	343, 682, 781, 1555, 1639, 1866, 2194
TaiI	ACGT	3 cut(s)	1689, 2169, 2308
TaqI	TCGA	1 cut(s)	89
TatI	WGTACW	1 cut(s)	393
TfiI	GAWTC	6 cut(s)	884, 1171, 1658, 1990, 2048, 2280
Tru1I	TTAA	7 cut(s)	69, 507, 743, 1185, 1350, 1467, 1890
Tru9I	TTAA	7 cut(s)	69, 507, 743, 1185, 1350, 1467, 1890
TscAI	CASTG	3 cut(s)	546, 924, 1338
TseFI	GTSAC	3 cut(s)	145, 731, 919
TseI	GCWGC	4 cut(s)	1044, 1679, 1966, 1969
Tsp45I	GTSAC	3 cut(s)	145, 731, 919
TspDTI	ATGAA	9 cut(s)	338, 671, 710, 843, 1019, 1241, 1287, 1404, 1556
TspGWI	ACGGA	4 cut(s)	1108, 1653, 1794, 2012
TspRI	CASTG	3 cut(s)	546, 924, 1338
Van91I	CCANNNNNTGG	2 cut(s)	992, 1460
VpaK11BI	GGWCC	2 cut(s)	547, 983
VspI	ATTAAT	2 cut(s)	69, 1185
XapI	RAATTY	9 cut(s)	236, 286, 758, 799, 862, 1246, 1346, 1932, 2105
XbaI	TCTAGA	1 cut(s)	1369
XcmI	CCANNNNNNNNNTGG	1 cut(s)	109
XmiI	GTMKAC	2 cut(s)	117, 1088
XmnI	GAANNNNTTC	1 cut(s)	682
XspI	CTAG	5 cut(s)	81, 605, 1370, 1494, 1851
Zsp2I	ATGCAT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.