Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0004178

Physical Location & Seq

Genomic Coordinates Forward (+)

18074055 .. 18080217

Gene Structure 6163 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00396550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGAGGTTGGAAGACAAAAATATATGCGAAATGATCAAACAAGCAATTGCTGGAGCTATGGAAGCATTAATCACCCAGCAAGCCAATTTAGGAAGATGTCAATTGGAGTTGTGGTGGACTCAATAGCCAAGAAAAAGTCTGGATGTGCAAAGGAAAGGGAGGTTGTGGTGCCAAATGCAGAAACAGTAAATACTAACATAGCGAATACCATACAGGGAAAGTTCAACGGGGAAGAAGTTACAGCTGCCAAAACAACAAAAGAAACTAAAAATCCAGAGCAGGTGAGTTCCCCATGGATCAGTACCAGACCCTTCCACGAGGAAATACTGACTTCAGATACTGCTCTTCATGCAAAACAAGCCTCTAAATTATCATCTGTTAGTAAGAGGCAGAACAGACTTGATGGAGCAAGGAACACACCACTTACATATTCAGTTGAGTTTTACGCAAACTCTTCCTCGATTCTACAGTCTGGTGATAACAAGCATAAGAAGTTTAGTGGAGTTACCTACAAAAAGAGGGGAGTGAATAATGGGACTGTGGAGGAAGTTCAGGATTTCACATTTGCAACTGCGCGGGAAGTTATTATGCCGGATAAGCAGGTGCTAACAGACAAAACAGATGCACAGGAAAACACAAGAACTGAAACACTCAGAATGAAGCTTTGGAATATATTGGGAGCTGCTGCTTCACCTAATGATCAGCACACCAAATCTCAGGAACCTGAGGTTGGTGATGATAATTTAAATCCTCAACCAGAATTTGATCAAATGGCTGATACCGTCAAGCTGACAAAGAGCTCTGATAAACCAGAGGACAAGTATAAAGAAAAGGGTGATGCATTTATCAAACCTAGACAAAATTCAGATACCATAGAAACGGACTCTGAAAGTCCTGAGAACACTGTCAGGAGACCTGTCACTCGTTCTTTGATCCCAAAGAGAGGCCGAGCCAAAGTAGGGAAGACAACTGCAAAGCCTACCCCATCTTCTGGCCACAAACGGAAACAGCGAGATACTGTATTTTCTTTTGAACAAGAATGCTTTGAGACACTACAGGATTCTGCTGGCAGATCCTCAAAGTTTCAGAAGAAGAGAGAGAATACAGGTTTCAGAACTGAGACTCATGAGGTCTGCCTTCCTGAAAAGGATAATTCAACTAAGATAAAGCAAGCCATTAATAGGAGGGGAAAACGACCACCTGCTAAGAAAGCTTATTCTGGAGGTACTAAAATGGGAGGTCTTCATGGTTCTCTACCTAACAATGAAAAAGAGTTTCTTGAACAGGAGAAAACTATCCCAGAGAAAGAAATCTGCCACTCACCACTGAAAAGCAAGAAATTTGGGGATTGTGACAATCCAGAGAGTAAGAACCAACGAGAAGACAGTCAAAATCCAGGCTTGAAGAATGCTGTAAATCCAGAAGATAATTTTCTAAGTCCAACATTTGAAATCAGAACACGCATGTCAAGTTCTTCTCCTTCAATCCCAAAATCAGACCAAAGGGCAGATTGTAGTAGTCCTGCACCAACGGAGAGGCGATTTGATGTGGGAGATATTCGCTGTTTCAGAACTTCCTCGACTTCAAAACAAGATTTTTCTGAAAATGCTCAAACACAATCTTCTGATGCCTCTGAGGAGATCAGGGATTCCCCATTGATGAAAACATCACCTGACATGGAGAAAAATGATGCAGAATCTGGCCGATCTTTATCATCATCAGAGGAGAGGGACTTGGAGACTTTTGAAGAAGGTTCTCCAGTTATTCAAGGACATAAATGGACTGGAGTAGATAATTGCGTTGAGGAACCTTCAGAGCCTAATGAAGTGGATGGATTGGCTAGGGCCGTTGAACTATTTGCTTTGGGACTAGAAAAACTAAAAACCAAAATGAAGACAGCAACTACAAGGAAATCCTCTGAAATCTTGATGTCTGTTGCTGCGGAGGTTCAGTTGCAGCTGCAGAATGTAGAGTCTCAGATTCAAACAGACATGGGAAAGCTTACAAACCTTGGCAAATCAAAGAGAAAAAAGCTGGAAACAAGGTTTGAGGAGCAACAAGGACAATTGAAAGTGATTTGTGACAAGTTCAAGGAACAGGTCAATCAGCATCTTCAGGATTGCAGAAGTACATTTGAAGGTCTGGAAGTGTACCAGACAGAGTTTAAGGGAACTGTGGAAAAGCAAAAAGCATCACACCGAAAGCTTGTCTCACAAGTGGAAGAAGCAATTGAGAACCAACTGAATGATGCCCAAAAAAGAATCAAAGTCATGAACGAGACGAGACGTGGACAGATGCTCCAGTTAAAGCGCCAACTAGCTTCCTGTTTGAGAGAGGGAATTCTAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0007049 GO:0008150 GO:0009987 GO:0010564 GO:0022414 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0040020 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044087 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051321 GO:0051445 GO:0051726 GO:0051783 GO:0051983 GO:0060629 GO:0060631 GO:0065007 GO:0070013 GO:0090173 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

783

Amino Acids

87.95

Weight (kDa)

8.76

Isoelectric Point (pI)

60.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ASY3-like	PF20435	15 - 593	1.7e-37	Meiosis-specific protein ASY3-like
ASY3-like	PF20435	606 - 779	1.2e-49	Meiosis-specific protein ASY3-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004178)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT2G46980 AT5G20995
fragaria_vesca	FvH4_1g26160 FvH4_1g26160 FvH4_4g08230
malus_domestica	MD09G1291300.v1.1 MD17G1286100.v1.1
prunus_persica	Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1 Prupe.3G001600_v2.0.a1
pyrus_communis	pycom09g19920 pycom17g28230
rosa_chinensis	RchiOBHm_Chr3g0485651
rosa_laevigata	RLG00000023137
rosa_multiflora	Rmu_co8410931.1_g000001
rosa_roxburghii	Rroxscaffold_6G00396550
rosa_rugosa	Rorug03G0220500
rosa_samantha	Rh3AG269400 Rh3BG305200 Rh3CG303500 Rh3DG299700
rosa_wichuraiana	Rw3G024010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	271, 592, 1210
Acc36I	ACCTGC	3 cut(s)	271, 592, 1210
AccB1I	GGYRCC	1 cut(s)	169
AccB7I	CCANNNNNTGG	1 cut(s)	992
AccII	CGCG	1 cut(s)	577
AciI	CCGC	2 cut(s)	577, 1943
AclWI	GGATC	3 cut(s)	305, 928, 1068
AcoI	YGGCCR	2 cut(s)	994, 1702
AcsI	RAATTY	4 cut(s)	761, 862, 1340, 2340
AcuI	CTGAAG	3 cut(s)	318, 1797, 2099
AfaI	GTAC	4 cut(s)	304, 1228, 2131, 2153
AfiI	CCNNNNNNNGG	5 cut(s)	731, 944, 960, 992, 1182
AjiI	CACGTC	1 cut(s)	2288
AjnI	CCWGG	1 cut(s)	1396
AjuI	GAANNNNNNNTTGG	4 cut(s)	649, 681, 714, 746
Alw21I	GWGCWC	1 cut(s)	803
Alw26I	GTCTC	8 cut(s)	907, 1043, 1115, 1733, 1980, 2215, 2273, 2278
AlwI	GGATC	3 cut(s)	305, 928, 1068
AlwNI	CAGNNNCTG	2 cut(s)	341, 1700
AoxI	GGCC	4 cut(s)	946, 994, 1702, 1845
ApeKI	GCWGC	6 cut(s)	245, 683, 686, 1940, 1957, 1960
ApoI	RAATTY	4 cut(s)	761, 862, 1340, 2340
AseI	ATTAAT	2 cut(s)	69, 1179
AspLEI	GCGC	2 cut(s)	577, 2313
AspS9I	GGNCC	1 cut(s)	1845
AsuHPI	GGTGA	8 cut(s)	65, 295, 488, 684, 746, 848, 1314, 1662
AxyI	CCTNAGG	1 cut(s)	726
BalI	TGGCCA	1 cut(s)	996
BanI	GGYRCC	1 cut(s)	169
BanII	GRGCYC	1 cut(s)	803
BauI	CACGAG	1 cut(s)	317
BbsI	GAAGAC	5 cut(s)	19, 971, 1235, 1389, 1901
Bbv12I	GWGCWC	1 cut(s)	803
BbvI	GCAGC	6 cut(s)	232, 670, 673, 1927, 1947, 1969
BccI	CCATC	3 cut(s)	398, 994, 1826
BceAI	ACGGC	1 cut(s)	1832
BciT130I	CCWGG	1 cut(s)	1398
BclI	TGATCA	3 cut(s)	34, 700, 766
BcoDI	GTCTC	8 cut(s)	907, 1043, 1115, 1733, 1980, 2215, 2273, 2278
BfaI	CTAG	4 cut(s)	855, 1842, 1871, 2318
BfmI	CTRYAG	3 cut(s)	467, 1055, 1961
BfoI	RGCGCY	1 cut(s)	2314
BfuAI	ACCTGC	3 cut(s)	271, 592, 1210
BisI	GCNGC	6 cut(s)	246, 684, 687, 1941, 1958, 1961
BlsI	GCNGC	6 cut(s)	247, 685, 688, 1942, 1959, 1962
Bme1390I	CCNGG	1 cut(s)	1398
BmgBI	CACGTC	1 cut(s)	2288
BmgT120I	GGNCC	1 cut(s)	1845
BmiI	GGNNCC	3 cut(s)	171, 723, 1809
BmrFI	CCNGG	1 cut(s)	1398
BmsI	GCATC	8 cut(s)	613, 829, 1618, 1681, 2119, 2201, 2239, 2286
BpiI	GAAGAC	5 cut(s)	19, 971, 1235, 1389, 1901
BpmI	CTGGAG	5 cut(s)	73, 1242, 1743, 1806, 2285
BsaBI	GATNNNNATC	1 cut(s)	1711
BsaI	GGTCTC	1 cut(s)	907
BsaJI	CCNNGG	2 cut(s)	293, 2011
BsaXI	ACNNNNNCTCC	6 cut(s)	99, 129, 1937, 1967, 2283, 2313
Bsc4I	CCNNNNNNNGG	5 cut(s)	731, 944, 960, 992, 1182
Bse1I	ACTGG	3 cut(s)	1760, 1789, 2302
Bse21I	CCTNAGG	1 cut(s)	726
Bse8I	GATNNNNATC	1 cut(s)	1711
BseBI	CCWGG	1 cut(s)	1398
BseDI	CCNNGG	2 cut(s)	293, 2011
BseGI	GGATG	2 cut(s)	149, 1837
BseJI	GATNNNNATC	1 cut(s)	1711
BseLI	CCNNNNNNNGG	5 cut(s)	731, 944, 960, 992, 1182
BseMII	CTCAG	7 cut(s)	667, 717, 731, 888, 1110, 1626, 1991
BseNI	ACTGG	3 cut(s)	1760, 1789, 2302
BseRI	GAGGAG	3 cut(s)	1652, 1739, 2066
BseXI	GCAGC	6 cut(s)	232, 670, 673, 1927, 1947, 1969
BseYI	CCCAGC	1 cut(s)	76
BsgI	GTGCAG	1 cut(s)	1509
Bsh1236I	CGCG	1 cut(s)	577
BshFI	GGCC	4 cut(s)	948, 996, 1704, 1847
BshNI	GGYRCC	1 cut(s)	169
BsiHKAI	GWGCWC	1 cut(s)	803
BsiSI	CCGG	1 cut(s)	593
BslFI	GGGAC	3 cut(s)	550, 1745, 1881
BslI	CCNNNNNNNGG	5 cut(s)	731, 944, 960, 992, 1182
BsmAI	GTCTC	8 cut(s)	907, 1043, 1115, 1733, 1980, 2215, 2273, 2278
BsmBI	CGTCTC	2 cut(s)	2273, 2278
BsmFI	GGGAC	3 cut(s)	550, 1745, 1881
BsmI	GAATGC	2 cut(s)	1046, 1414
BsnI	GGCC	4 cut(s)	948, 996, 1704, 1847
Bso31I	GGTCTC	1 cut(s)	907
Bsp1286I	GDGCHC	1 cut(s)	803
Bsp143I	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
Bsp19I	CCATGG	1 cut(s)	293
BspACI	CCGC	2 cut(s)	577, 1943
BspANI	GGCC	4 cut(s)	948, 996, 1704, 1847
BspCNI	CTCAG	7 cut(s)	666, 718, 730, 889, 1111, 1627, 1990
BspFNI	CGCG	1 cut(s)	577
BspHI	TCATGA	2 cut(s)	1126, 2271
BspLI	GGNNCC	3 cut(s)	171, 723, 1809
BspMAI	CTGCAG	1 cut(s)	1965
BspMI	ACCTGC	3 cut(s)	271, 592, 1210
BspPI	GGATC	3 cut(s)	305, 928, 1068
BspQI	GCTCTTC	1 cut(s)	351
BspT107I	GGYRCC	1 cut(s)	169
BspTNI	GGTCTC	1 cut(s)	907
BsrI	ACTGG	3 cut(s)	1760, 1789, 2302
BssECI	CCNNGG	2 cut(s)	293, 2011
BssMI	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
BssSI	CACGAG	1 cut(s)	317
BssT1I	CCWWGG	2 cut(s)	293, 2011
Bst2BI	CACGAG	1 cut(s)	317
Bst2UI	CCWGG	1 cut(s)	1398
Bst4CI	ACNGT	8 cut(s)	187, 471, 541, 784, 907, 1021, 1388, 2176
Bst6I	CTCTTC	3 cut(s)	351, 460, 1088
BstC8I	GCNNGC	3 cut(s)	82, 1069, 1173
BstDSI	CCRYGG	1 cut(s)	293
BstF5I	GGATG	2 cut(s)	149, 1837
BstFNI	CGCG	1 cut(s)	577
BstH2I	RGCGCY	1 cut(s)	2314
BstHHI	GCGC	2 cut(s)	577, 2313
BstKTI	GATC	8 cut(s)	37, 300, 703, 769, 936, 1076, 1644, 1709
BstMAI	GTCTC	8 cut(s)	907, 1043, 1115, 1733, 1980, 2215, 2273, 2278
BstMBI	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
BstMWI	GCNNNNNNNGC	5 cut(s)	63, 350, 359, 598, 1211
BstNI	CCWGG	1 cut(s)	1398
BstNSI	RCATGY	1 cut(s)	1468
BstSCI	CCNGG	1 cut(s)	1396
BstSFI	CTRYAG	3 cut(s)	467, 1055, 1961
BstUI	CGCG	1 cut(s)	577
BstV1I	GCAGC	6 cut(s)	232, 670, 673, 1927, 1947, 1969
BstV2I	GAAGAC	5 cut(s)	19, 971, 1235, 1389, 1901
BstX2I	RGATCY	1 cut(s)	1073
BstYI	RGATCY	1 cut(s)	1073
Bsu36I	CCTNAGG	1 cut(s)	726
BsuRI	GGCC	4 cut(s)	948, 996, 1704, 1847
BtgI	CCRYGG	1 cut(s)	293
BtrI	CACGTC	1 cut(s)	2288
BtsCI	GGATG	2 cut(s)	149, 1837
BtsIMutI	CAGTG	2 cut(s)	903, 1325
BveI	ACCTGC	3 cut(s)	271, 592, 1210
Cac8I	GCNNGC	3 cut(s)	82, 1069, 1173
CaiI	CAGNNNCTG	2 cut(s)	341, 1700
CciI	TCATGA	2 cut(s)	1126, 2271
CfoI	GCGC	2 cut(s)	577, 2313
Cfr13I	GGNCC	1 cut(s)	1845
Csp6I	GTAC	4 cut(s)	303, 1227, 2130, 2152
CviAII	CATG	8 cut(s)	294, 350, 1127, 1247, 1465, 1678, 1993, 2272
CviQI	GTAC	4 cut(s)	303, 1227, 2130, 2152
DpnI	GATC	8 cut(s)	36, 299, 702, 768, 935, 1075, 1643, 1708
DpnII	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
DraI	TTTAAA	1 cut(s)	747
EaeI	YGGCCR	2 cut(s)	994, 1702
Eam1104I	CTCTTC	3 cut(s)	351, 460, 1088
EarI	CTCTTC	3 cut(s)	351, 460, 1088
Ecl136II	GAGCTC	1 cut(s)	801
Eco130I	CCWWGG	2 cut(s)	293, 2011
Eco24I	GRGCYC	1 cut(s)	803
Eco31I	GGTCTC	1 cut(s)	907
Eco53kI	GAGCTC	1 cut(s)	801
Eco57I	CTGAAG	3 cut(s)	318, 1797, 2099
Eco81I	CCTNAGG	1 cut(s)	726
EcoICRI	GAGCTC	1 cut(s)	801
EcoRI	GAATTC	1 cut(s)	2340
EcoRII	CCWGG	1 cut(s)	1396
EcoT14I	CCWWGG	2 cut(s)	293, 2011
EcoT22I	ATGCAT	1 cut(s)	844
EcoT38I	GRGCYC	1 cut(s)	803
ErhI	CCWWGG	2 cut(s)	293, 2011
Esp3I	CGTCTC	2 cut(s)	2273, 2278
FaeI	CATG	8 cut(s)	297, 353, 1130, 1250, 1468, 1681, 1996, 2275
FalI	AAGNNNNNCTT	2 cut(s)	1263, 1295
FaqI	GGGAC	3 cut(s)	550, 1745, 1881
FatI	CATG	8 cut(s)	293, 349, 1126, 1246, 1464, 1677, 1992, 2271
FauI	CCCGC	1 cut(s)	570
FbaI	TGATCA	3 cut(s)	34, 700, 766
Fnu4HI	GCNGC	6 cut(s)	246, 684, 687, 1941, 1958, 1961
FokI	GGATG	2 cut(s)	156, 1844
FriOI	GRGCYC	1 cut(s)	803
Fsp4HI	GCNGC	6 cut(s)	246, 684, 687, 1941, 1958, 1961
FspBI	CTAG	4 cut(s)	855, 1842, 1871, 2318
GlaI	GCGC	2 cut(s)	576, 2312
GluI	GCNGC	6 cut(s)	246, 684, 687, 1941, 1958, 1961
GsaI	CCCAGC	1 cut(s)	80
GsuI	CTGGAG	5 cut(s)	73, 1242, 1743, 1806, 2285
HaeII	RGCGCY	1 cut(s)	2314
HaeIII	GGCC	4 cut(s)	948, 996, 1704, 1847
HapII	CCGG	1 cut(s)	593
HhaI	GCGC	2 cut(s)	577, 2313
Hin1II	CATG	8 cut(s)	297, 353, 1130, 1250, 1468, 1681, 1996, 2275
Hin6I	GCGC	2 cut(s)	575, 2311
HinP1I	GCGC	2 cut(s)	575, 2311
HindIII	AAGCTT	4 cut(s)	662, 1212, 2000, 2204
HpaII	CCGG	1 cut(s)	593
HphI	GGTGA	8 cut(s)	65, 295, 488, 684, 746, 848, 1314, 1662
Hpy166II	GTNNAC	3 cut(s)	118, 2152, 2291
Hpy8I	GTNNAC	3 cut(s)	118, 2152, 2291
HpyAV	CCTTC	6 cut(s)	322, 1148, 1491, 1745, 1821, 2132
HpyCH4III	ACNGT	8 cut(s)	187, 471, 541, 784, 907, 1021, 1388, 2176
HpyCH4IV	ACGT	1 cut(s)	2287
HpyF10VI	GCNNNNNNNGC	5 cut(s)	63, 350, 359, 598, 1211
HpySE526I	ACGT	1 cut(s)	2287
Hsp92II	CATG	8 cut(s)	297, 353, 1130, 1250, 1468, 1681, 1996, 2275
HspAI	GCGC	2 cut(s)	575, 2311
Ksp22I	TGATCA	3 cut(s)	34, 700, 766
Kzo9I	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
LguI	GCTCTTC	1 cut(s)	351
LmnI	GCTCC	5 cut(s)	54, 407, 680, 2053, 2304
Lsp1109I	GCAGC	6 cut(s)	232, 670, 673, 1927, 1947, 1969
LweI	GCATC	8 cut(s)	613, 829, 1618, 1681, 2119, 2201, 2239, 2286
MaeI	CTAG	4 cut(s)	855, 1842, 1871, 2318
MaeII	ACGT	1 cut(s)	2287
MaeIII	GTNAC	5 cut(s)	238, 505, 919, 1352, 2081
MalI	GATC	8 cut(s)	36, 299, 702, 768, 935, 1075, 1643, 1708
MboI	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
MfeI	CAATTG	4 cut(s)	46, 102, 2066, 2229
MflI	RGATCY	1 cut(s)	1073
MhlI	GDGCHC	1 cut(s)	803
MlsI	TGGCCA	1 cut(s)	996
MluNI	TGGCCA	1 cut(s)	996
MlyI	GAGTC	4 cut(s)	113, 878, 1117, 1982
MmeI	TCCRAC	1 cut(s)	1466
Mox20I	TGGCCA	1 cut(s)	996
Mph1103I	ATGCAT	1 cut(s)	844
MscI	TGGCCA	1 cut(s)	996
MseI	TTAA	5 cut(s)	69, 746, 1179, 2166, 2306
Msp20I	TGGCCA	1 cut(s)	996
MspA1I	CMGCKG	2 cut(s)	245, 1960
MspI	CCGG	1 cut(s)	593
MspR9I	CCNGG	1 cut(s)	1398
MunI	CAATTG	4 cut(s)	46, 102, 2066, 2229
Mva1269I	GAATGC	2 cut(s)	1046, 1414
MvaI	CCWGG	1 cut(s)	1398
MvnI	CGCG	1 cut(s)	577
MwoI	GCNNNNNNNGC	5 cut(s)	63, 350, 359, 598, 1211
NcoI	CCATGG	1 cut(s)	293
NdeII	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
NlaIII	CATG	8 cut(s)	297, 353, 1130, 1250, 1468, 1681, 1996, 2275
NlaIV	GGNNCC	3 cut(s)	171, 723, 1809
NmeAIII	GCCGAG	1 cut(s)	974
NmuCI	GTSAC	3 cut(s)	919, 1352, 2081
NsiI	ATGCAT	1 cut(s)	844
NspI	RCATGY	1 cut(s)	1468
PagI	TCATGA	2 cut(s)	1126, 2271
PaqCI	CACCTGC	3 cut(s)	271, 592, 1210
PciSI	GCTCTTC	1 cut(s)	351
PcsI	WCGNNNNNNNCGW	1 cut(s)	1009
PctI	GAATGC	2 cut(s)	1046, 1414
PfeI	GAWTC	6 cut(s)	463, 1061, 1649, 1697, 1981, 2262
PflMI	CCANNNNNTGG	1 cut(s)	992
PkrI	GCNGC	6 cut(s)	247, 685, 688, 1942, 1959, 1962
PleI	GAGTC	4 cut(s)	113, 878, 1117, 1981
PpsI	GAGTC	4 cut(s)	113, 878, 1117, 1981
PshBI	ATTAAT	2 cut(s)	69, 1179
Psp124BI	GAGCTC	1 cut(s)	803
Psp6I	CCWGG	1 cut(s)	1396
PspFI	CCCAGC	1 cut(s)	76
PspGI	CCWGG	1 cut(s)	1396
PspN4I	GGNNCC	3 cut(s)	171, 723, 1809
PspPI	GGNCC	1 cut(s)	1845
PstI	CTGCAG	1 cut(s)	1965
PstNI	CAGNNNCTG	2 cut(s)	341, 1700
PsuI	RGATCY	1 cut(s)	1073
PvuII	CAGCTG	2 cut(s)	245, 1960
RsaI	GTAC	4 cut(s)	304, 1228, 2131, 2153
RsaNI	GTAC	4 cut(s)	303, 1227, 2130, 2152
SacI	GAGCTC	1 cut(s)	803
SapI	GCTCTTC	1 cut(s)	351
SaqAI	TTAA	5 cut(s)	69, 746, 1179, 2166, 2306
SatI	GCNGC	6 cut(s)	246, 684, 687, 1941, 1958, 1961
Sau3AI	GATC	8 cut(s)	34, 297, 700, 766, 933, 1073, 1641, 1706
Sau96I	GGNCC	1 cut(s)	1845
SchI	GAGTC	4 cut(s)	113, 878, 1117, 1982
ScrFI	CCNGG	1 cut(s)	1398
SduI	GDGCHC	1 cut(s)	803
SfaNI	GCATC	8 cut(s)	613, 829, 1618, 1681, 2119, 2201, 2239, 2286
SfcI	CTRYAG	3 cut(s)	467, 1055, 1961
SmiI	ATTTAAAT	1 cut(s)	747
SsiI	CCGC	2 cut(s)	577, 1943
SspMI	CTAG	4 cut(s)	855, 1842, 1871, 2318
SstI	GAGCTC	1 cut(s)	803
StyD4I	CCNGG	1 cut(s)	1396
StyI	CCWWGG	2 cut(s)	293, 2011
SwaI	ATTTAAAT	1 cut(s)	747
TaaI	ACNGT	8 cut(s)	187, 471, 541, 784, 907, 1021, 1388, 2176
TaiI	ACGT	1 cut(s)	2290
TaqI	TCGA	2 cut(s)	461, 1580
TatI	WGTACW	1 cut(s)	2129
TfiI	GAWTC	6 cut(s)	463, 1061, 1649, 1697, 1981, 2262
Tru1I	TTAA	5 cut(s)	69, 746, 1179, 2166, 2306
Tru9I	TTAA	5 cut(s)	69, 746, 1179, 2166, 2306
TscAI	CASTG	2 cut(s)	910, 1332
TseFI	GTSAC	3 cut(s)	919, 1352, 2081
TseI	GCWGC	6 cut(s)	245, 683, 686, 1940, 1957, 1960
Tsp45I	GTSAC	3 cut(s)	919, 1352, 2081
TspDTI	ATGAA	8 cut(s)	338, 674, 1235, 1281, 1676, 1839, 1907, 2288
TspGWI	ACGGA	3 cut(s)	896, 1018, 1547
TspRI	CASTG	2 cut(s)	910, 1332
Van91I	CCANNNNNTGG	1 cut(s)	992
VspI	ATTAAT	2 cut(s)	69, 1179
XapI	RAATTY	4 cut(s)	761, 862, 1340, 2340
XceI	RCATGY	1 cut(s)	1468
XspI	CTAG	4 cut(s)	855, 1842, 1871, 2318
Zsp2I	ATGCAT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.