Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0008261

Physical Location & Seq

Genomic Coordinates Forward (+)

9763980 .. 9770114

Gene Structure 6135 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1070300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGTCGGGCCCGCTTGATCGGTTCGCCAGGCCTTGTTTTGAAGGGTTTTATGGTAGTGATGAGAGGAGAGAGAGGAAGTCTGATTTTGAGAATTCCGAGGATGAGCGGAGGACTAGAATTGGGACTCTGAAGAAGAAGGCGCTAAATGCATCTACCAAATTCAAACATTCTCTCAAAAAAAAGGGCAGTAGGAGAAAGAGTGATGGCCGAGTCAGCTCTGTTTCCATTGAAGACGTTCGCGATATTGAAGAGCTGCAGGCTGTTGATGCATTTCGACAAGCACTAATTTTGGATGAATTGCTCCCAGAAAAGCATGATGACTATCATATGATGTTGAGGTTTTTGAAAGCAAGGAAGTTTGATGTTGAAAAAGCCAAGCATATGTGGGCTGATATGCTTCAATGGAGAAAGGACTATAGTGCCGACACTATCATGGAGGATTTTGAATTCAAAGAGTTGAATGAAGTTCTACAGCACTACCCTCATGGGCATCATGGTGTGGATAAGGAGGGAAGGCCCATTTACATTGAAAGATTGGGTAAAGTAGATCCCAATAAAGTAATGCAGGTTACGACTATGGATCGTTATGTGAAATACCATGTCCAGGAGTTCGAGAAAAACTTTGCAATAAAATTTCCAGCTTGCACCATTGCTGCAAAGAGGCACATAGATTCAAGCACTACAATTTTAGATGTTCAAGGCGTGGGATTCAAGAATTTTACAAAGTCTGCACGAGATTTAATTACGCGGTTGCAGAACATTGATAATAACAATTACCCTGAGACCCTGTGTCAAATGTTCATCATTAATGCTGGTCCTGGATTTAGGCTGCTGTGGAACACTGTGAAGACTTTTCTCGATCCTAGAACAACATCAAAGATTCATGTTCTTGGAAACAAATATCAGAACAAATTGCTTGAGGTAATCGATGCCAGTGAGTTGCCAGAATTTCTGGGCGGTAACTGTACCTGTGCAGATCAGGGAGGTTGCCTTCGATCTGATAAGGGGCCATGGAAAAACCCTGAGATATTGAAGATGGTTCTAAACGGTGAAGCACGACGTGCAAGGCAAGTTGTTAAAGTTCTAAACAGTGAGGGGAAGGTTCTTGCTTATGCTAAGCCACAATATCCTATGGTAAAGGGAAGTGATACATCCACTGCTGAGTCAGGATCTGAAGCAGAAGATATTGCGTCCCCAAAAGCTTTGAAGAATTATTCACATCTTCGATTGACTCCTGTTCGTGAAGAGGTTAAAGCCGTTGGCAAGGCAAACTGCGCAGGTCATTTCTCTGGTTATGATGAATATGTTCCTATGGTTGACAAAGCCGTTGATACTAATTGGAAAAAGCAAGTGGCCCTCCAGAGAACTCATTCTTCCAAAGGGACACTTCCAGTACCTGACACCCCGAAGAATCCAGAAGGAATCCAAGGTCGGATTTTGGTTGCACTGATGGCCTTCTTCATGACTTTCCTCACTCTCTTCCGCTCAGTGGCTTCCCAAGTAACTAGGAAGCTTCCTGATGCATTGGTCAATCACAATCAAAATATTCCGGAAAGCACTTCTGATGAAGCAAACAAGGAAGAGGGTCGTCCTCCCTCACCAACATCACCAATTACAGGGACAGATCTTCTCCCCACTGTACTGAAAAAGCTGGTGGAGCTTGAGGAGAAGGTTGGCATGCTTGAAGCTAAGCCATCCGAGATGCCTTATGAGAAAGAGGAATTGCTGAATGCTGCTGTTTGTCGGGTGGATGCCTTGGAAGCCGAGTTAATTGCTACTAAAAAGGCTCTGCACGAGGCTTTAATGAGGCAAGAAGAGCTTCTGGCCTATATTGACAGGGAAGAAGACGCCAGGCTCCGGAAAAAGAAGTTTTTTTGCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008525 GO:0008526 GO:0009653 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048193 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0071702 GO:0071840 GO:0071944 GO:0120009 GO:0120010 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

628

Amino Acids

71.36

Weight (kDa)

8.57

Isoelectric Point (pI)

42.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	103 - 131	2.4e-07	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	158 - 320	2e-30	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21520 AT2G21520 AT2G21520 AT4G39170 AT4G39170
fragaria_vesca	FvH4_2g09500
malus_domestica	MD05G1062600.v1.1 MD10G1070300.v1.1
prunus_persica	Prupe.8G091900_v2.0.a1 Prupe.8G091900_v2.0.a1
pyrus_communis	pycom05g05420 pycom10g05610
rosa_chinensis	RchiOBHm_Chr6g0265801
rosa_laevigata	RLG00000014159
rosa_multiflora	Rmu_sc0000208.1_g000031
rosa_roxburghii	Rroxscaffold_7G00202380
rosa_rugosa	Rorug06G0019600 Rorug06G0019700
rosa_samantha	Rh6AG141700 Rh6BG141700 Rh6CG138300 Rh6DG125300
rosa_wichuraiana	Rw6G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1276
Acc36I	ACCTGC	2 cut(s)	556, 1268
AccBSI	CCGCTC	2 cut(s)	106, 1485
AccII	CGCG	2 cut(s)	240, 748
AccIII	TCCGGA	2 cut(s)	1549, 1857
AciI	CCGC	5 cut(s)	11, 106, 748, 957, 1483
AclWI	GGATC	4 cut(s)	542, 588, 854, 1177
AcoI	YGGCCR	1 cut(s)	205
AcsI	RAATTY	6 cut(s)	91, 158, 446, 632, 715, 947
AcuI	CTGAAG	2 cut(s)	149, 1194
AcyI	GRCGYC	1 cut(s)	1848
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	3 cut(s)	967, 1395, 1641
AfiI	CCNNNNNNNGG	4 cut(s)	604, 1489, 1616, 1857
AhdI	GACNNNNNGTC	1 cut(s)	789
AjiI	CACGTC	1 cut(s)	1061
AjnI	CCWGG	4 cut(s)	26, 603, 817, 1850
AluBI	AGCT	9 cut(s)	216, 253, 641, 1202, 1513, 1651, 1660, 1688, 1819
AluI	AGCT	9 cut(s)	216, 253, 641, 1202, 1513, 1651, 1660, 1688, 1819
Alw26I	GTCTC	1 cut(s)	776
AlwI	GGATC	4 cut(s)	542, 588, 854, 1177
AlwNI	CAGNNNCTG	2 cut(s)	1172, 1397
Aor13HI	TCCGGA	2 cut(s)	1549, 1857
AoxI	GGCC	8 cut(s)	7, 29, 205, 515, 1007, 1353, 1452, 1824
ApaI	GGGCCC	1 cut(s)	11
ApeKI	GCWGC	4 cut(s)	253, 653, 829, 1733
ApoI	RAATTY	6 cut(s)	91, 158, 446, 632, 715, 947
AseI	ATTAAT	1 cut(s)	807
Asp700I	GAANNNNTTC	4 cut(s)	234, 1305, 1369, 1818
AspLEI	GCGC	2 cut(s)	142, 1277
AspS9I	GGNCC	6 cut(s)	7, 8, 516, 815, 1007, 1354
AsuHPI	GGTGA	3 cut(s)	1061, 1590, 1599
AvaII	GGWCC	1 cut(s)	815
BaeGI	GKGCMC	1 cut(s)	11
BanII	GRGCYC	1 cut(s)	11
BauI	CACGAG	2 cut(s)	732, 1793
BbsI	GAAGAC	3 cut(s)	237, 854, 1851
BbvI	GCAGC	4 cut(s)	240, 640, 816, 1720
BccI	CCATC	4 cut(s)	197, 1030, 1444, 1702
BceAI	ACGGC	2 cut(s)	1241, 1310
BcgI	CGANNNNNNTGC	2 cut(s)	1754, 1788
BciT130I	CCWGG	4 cut(s)	28, 605, 819, 1852
BcoDI	GTCTC	1 cut(s)	776
BfaI	CTAG	3 cut(s)	114, 864, 1506
BfmI	CTRYAG	3 cut(s)	254, 415, 470
BfoI	RGCGCY	1 cut(s)	143
BfuAI	ACCTGC	2 cut(s)	556, 1268
BglII	AGATCT	1 cut(s)	1624
BisI	GCNGC	4 cut(s)	254, 654, 830, 1734
BlpI	GCTNAGC	2 cut(s)	1116, 1689
BlsI	GCNGC	4 cut(s)	255, 655, 831, 1735
Bme1390I	CCNGG	4 cut(s)	28, 605, 819, 1852
Bme18I	GGWCC	1 cut(s)	815
BmeRI	GACNNNNNGTC	1 cut(s)	789
BmgBI	CACGTC	1 cut(s)	1061
BmgT120I	GGNCC	6 cut(s)	7, 8, 516, 815, 1007, 1354
BmiI	GGNNCC	3 cut(s)	9, 1008, 1856
BmrFI	CCNGG	4 cut(s)	28, 605, 819, 1852
BmsI	GCATC	7 cut(s)	158, 256, 499, 919, 1510, 1692, 1741
BpiI	GAAGAC	3 cut(s)	237, 854, 1851
BpmI	CTGGAG	1 cut(s)	1343
Bpu1102I	GCTNAGC	2 cut(s)	1116, 1689
BpuEI	CTTGAG	2 cut(s)	938, 1682
Bsa29I	ATCGAT	1 cut(s)	927
BsaBI	GATNNNNATC	1 cut(s)	321
BsaHI	GRCGYC	1 cut(s)	1848
BsaI	GGTCTC	1 cut(s)	776
BsaJI	CCNNGG	4 cut(s)	96, 1010, 1426, 1755
BsaWI	WCCGGW	2 cut(s)	1549, 1857
BsaXI	ACNNNNNCTCC	2 cut(s)	184, 214
Bsc4I	CCNNNNNNNGG	4 cut(s)	604, 1489, 1616, 1857
Bse1I	ACTGG	2 cut(s)	933, 1391
Bse3DI	GCAATG	1 cut(s)	648
Bse8I	GATNNNNATC	1 cut(s)	321
BseAI	TCCGGA	2 cut(s)	1549, 1857
BseBI	CCWGG	4 cut(s)	28, 605, 819, 1852
BseCI	ATCGAT	1 cut(s)	927
BseDI	CCNNGG	4 cut(s)	96, 1010, 1426, 1755
BseGI	GGATG	5 cut(s)	106, 298, 1151, 1694, 1756
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	4 cut(s)	604, 1489, 1616, 1857
BseMI	GCAATG	1 cut(s)	648
BseMII	CTCAG	4 cut(s)	771, 1014, 1152, 1500
BseNI	ACTGG	2 cut(s)	933, 1391
BseRI	GAGGAG	2 cut(s)	79, 1679
BseSI	GKGCMC	1 cut(s)	11
BseXI	GCAGC	4 cut(s)	240, 640, 816, 1720
BsgI	GTGCAG	3 cut(s)	714, 993, 1775
Bsh1236I	CGCG	2 cut(s)	240, 748
BshFI	GGCC	8 cut(s)	9, 31, 207, 517, 1009, 1355, 1454, 1826
BshVI	ATCGAT	1 cut(s)	927
BsiSI	CCGG	2 cut(s)	1550, 1858
BslFI	GGGAC	4 cut(s)	136, 1177, 1396, 1633
BslI	CCNNNNNNNGG	4 cut(s)	604, 1489, 1616, 1857
BsmAI	GTCTC	1 cut(s)	776
BsmFI	GGGAC	4 cut(s)	136, 1177, 1396, 1633
BsmI	GAATGC	1 cut(s)	1735
BsnI	GGCC	8 cut(s)	9, 31, 207, 517, 1009, 1355, 1454, 1826
Bso31I	GGTCTC	1 cut(s)	776
Bsp120I	GGGCCC	1 cut(s)	7
Bsp1286I	GDGCHC	1 cut(s)	11
Bsp13I	TCCGGA	2 cut(s)	1549, 1857
Bsp143I	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
Bsp1720I	GCTNAGC	2 cut(s)	1116, 1689
Bsp19I	CCATGG	1 cut(s)	1010
Bsp68I	TCGCGA	1 cut(s)	240
BspACI	CCGC	5 cut(s)	11, 106, 748, 957, 1483
BspANI	GGCC	8 cut(s)	9, 31, 207, 517, 1009, 1355, 1454, 1826
BspCNI	CTCAG	4 cut(s)	772, 1015, 1153, 1499
BspDI	ATCGAT	1 cut(s)	927
BspEI	TCCGGA	2 cut(s)	1549, 1857
BspFNI	CGCG	2 cut(s)	240, 748
BspHI	TCATGA	1 cut(s)	1461
BspLI	GGNNCC	3 cut(s)	9, 1008, 1856
BspMAI	CTGCAG	1 cut(s)	258
BspMI	ACCTGC	2 cut(s)	556, 1268
BspPI	GGATC	4 cut(s)	542, 588, 854, 1177
BspQI	GCTCTTC	2 cut(s)	243, 1809
BspTNI	GGTCTC	1 cut(s)	776
BsrBI	CCGCTC	2 cut(s)	106, 1485
BsrDI	GCAATG	1 cut(s)	648
BsrI	ACTGG	2 cut(s)	933, 1391
BssECI	CCNNGG	4 cut(s)	96, 1010, 1426, 1755
BssMI	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
BssNI	GRCGYC	1 cut(s)	1848
BssSI	CACGAG	2 cut(s)	732, 1793
BssT1I	CCWWGG	3 cut(s)	1010, 1426, 1755
Bst2BI	CACGAG	2 cut(s)	732, 1793
Bst2UI	CCWGG	4 cut(s)	28, 605, 819, 1852
Bst4CI	ACNGT	5 cut(s)	844, 965, 1049, 1091, 1639
Bst6I	CTCTTC	5 cut(s)	243, 1239, 1484, 1575, 1809
BstACI	GRCGYC	1 cut(s)	1848
BstAPI	GCANNNNNTGC	1 cut(s)	1061
BstC8I	GCNNGC	4 cut(s)	11, 258, 643, 1679
BstDEI	CTNAG	6 cut(s)	780, 1023, 1116, 1161, 1486, 1689
BstDSI	CCRYGG	1 cut(s)	1010
BstF5I	GGATG	5 cut(s)	106, 298, 1151, 1694, 1756
BstFNI	CGCG	2 cut(s)	240, 748
BstH2I	RGCGCY	1 cut(s)	143
BstHHI	GCGC	2 cut(s)	142, 1277
BstKTI	GATC	8 cut(s)	19, 550, 583, 862, 979, 998, 1172, 1627
BstMAI	GTCTC	1 cut(s)	776
BstMBI	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
BstMWI	GCNNNNNNNGC	9 cut(s)	146, 213, 266, 1061, 1274, 1451, 1657, 1760, 1816
BstNI	CCWGG	4 cut(s)	28, 605, 819, 1852
BstNSI	RCATGY	1 cut(s)	1681
BstSCI	CCNGG	4 cut(s)	26, 603, 817, 1850
BstSFI	CTRYAG	3 cut(s)	254, 415, 470
BstSLI	GKGCMC	1 cut(s)	11
BstUI	CGCG	2 cut(s)	240, 748
BstV1I	GCAGC	4 cut(s)	240, 640, 816, 1720
BstV2I	GAAGAC	3 cut(s)	237, 854, 1851
BstX2I	RGATCY	3 cut(s)	547, 1169, 1624
BstYI	RGATCY	3 cut(s)	547, 1169, 1624
Bsu15I	ATCGAT	1 cut(s)	927
BsuRI	GGCC	8 cut(s)	9, 31, 207, 517, 1009, 1355, 1454, 1826
BsuTUI	ATCGAT	1 cut(s)	927
BtgI	CCRYGG	1 cut(s)	1010
BtrI	CACGTC	1 cut(s)	1061
BtsCI	GGATG	5 cut(s)	106, 298, 1151, 1694, 1756
BtsI	GCAGTG	1 cut(s)	1155
BtsIMutI	CAGTG	7 cut(s)	840, 940, 1096, 1155, 1445, 1494, 1635
BtuMI	TCGCGA	1 cut(s)	240
BveI	ACCTGC	2 cut(s)	556, 1268
Cac8I	GCNNGC	4 cut(s)	11, 258, 643, 1679
CaiI	CAGNNNCTG	2 cut(s)	1172, 1397
CciI	TCATGA	1 cut(s)	1461
CfoI	GCGC	2 cut(s)	142, 1277
Cfr13I	GGNCC	6 cut(s)	7, 8, 516, 815, 1007, 1354
ClaI	ATCGAT	1 cut(s)	927
CseI	GACGC	2 cut(s)	1179, 1856
Csp6I	GTAC	3 cut(s)	966, 1394, 1640
CviAII	CATG	9 cut(s)	314, 433, 485, 494, 599, 884, 1011, 1462, 1678
CviQI	GTAC	3 cut(s)	966, 1394, 1640
DdeI	CTNAG	6 cut(s)	780, 1023, 1116, 1161, 1486, 1689
DpnI	GATC	8 cut(s)	18, 549, 582, 861, 978, 997, 1171, 1626
DpnII	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
DraIII	CACNNNGTG	1 cut(s)	1061
DriI	GACNNNNNGTC	1 cut(s)	789
EaeI	YGGCCR	1 cut(s)	205
Eam1104I	CTCTTC	5 cut(s)	243, 1239, 1484, 1575, 1809
Eam1105I	GACNNNNNGTC	1 cut(s)	789
EarI	CTCTTC	5 cut(s)	243, 1239, 1484, 1575, 1809
Eco130I	CCWWGG	3 cut(s)	1010, 1426, 1755
Eco147I	AGGCCT	1 cut(s)	31
Eco24I	GRGCYC	1 cut(s)	11
Eco31I	GGTCTC	1 cut(s)	776
Eco47I	GGWCC	1 cut(s)	815
Eco57I	CTGAAG	2 cut(s)	149, 1194
EcoRI	GAATTC	2 cut(s)	91, 446
EcoRII	CCWGG	4 cut(s)	26, 603, 817, 1850
EcoT14I	CCWWGG	3 cut(s)	1010, 1426, 1755
EcoT22I	ATGCAT	3 cut(s)	151, 271, 1525
EcoT38I	GRGCYC	1 cut(s)	11
ErhI	CCWWGG	3 cut(s)	1010, 1426, 1755
FaeI	CATG	9 cut(s)	317, 436, 488, 497, 602, 887, 1014, 1465, 1681
FalI	AAGNNNNNCTT	4 cut(s)	1371, 1403, 1803, 1835
FaqI	GGGAC	4 cut(s)	136, 1177, 1396, 1633
FatI	CATG	9 cut(s)	313, 432, 484, 493, 598, 883, 1010, 1461, 1677
FauI	CCCGC	1 cut(s)	18
FauNDI	CATATG	2 cut(s)	327, 381
Fnu4HI	GCNGC	4 cut(s)	254, 654, 830, 1734
FokI	GGATG	5 cut(s)	113, 305, 1138, 1681, 1763
FriOI	GRGCYC	1 cut(s)	11
Fsp4HI	GCNGC	4 cut(s)	254, 654, 830, 1734
FspBI	CTAG	3 cut(s)	114, 864, 1506
FspI	TGCGCA	1 cut(s)	1276
GlaI	GCGC	2 cut(s)	141, 1276
GluI	GCNGC	4 cut(s)	254, 654, 830, 1734
GsuI	CTGGAG	1 cut(s)	1343
HaeII	RGCGCY	1 cut(s)	143
HaeIII	GGCC	8 cut(s)	9, 31, 207, 517, 1009, 1355, 1454, 1826
HapII	CCGG	2 cut(s)	1550, 1858
HgaI	GACGC	2 cut(s)	1179, 1856
HhaI	GCGC	2 cut(s)	142, 1277
Hin1I	GRCGYC	1 cut(s)	1848
Hin1II	CATG	9 cut(s)	317, 436, 488, 497, 602, 887, 1014, 1465, 1681
Hin6I	GCGC	2 cut(s)	140, 1275
HinP1I	GCGC	2 cut(s)	140, 1275
HincII	GTYRAC	1 cut(s)	1318
HindII	GTYRAC	1 cut(s)	1318
HindIII	AAGCTT	2 cut(s)	1200, 1511
HinfI	GANTC	9 cut(s)	124, 210, 671, 708, 880, 1163, 1231, 1411, 1422
HpaII	CCGG	2 cut(s)	1550, 1858
HphI	GGTGA	3 cut(s)	1061, 1590, 1599
Hpy166II	GTNNAC	1 cut(s)	1318
Hpy188I	TCNGA	9 cut(s)	82, 97, 129, 906, 1000, 1174, 1434, 1564, 1699
Hpy8I	GTNNAC	1 cut(s)	1318
Hpy99I	CGWCG	1 cut(s)	1062
HpyAV	CCTTC	8 cut(s)	35, 130, 507, 1001, 1093, 1412, 1465, 1663
HpyCH4III	ACNGT	5 cut(s)	844, 965, 1049, 1091, 1639
HpyCH4IV	ACGT	2 cut(s)	234, 1060
HpyF10VI	GCNNNNNNNGC	9 cut(s)	146, 213, 266, 1061, 1274, 1451, 1657, 1760, 1816
HpyF3I	CTNAG	6 cut(s)	780, 1023, 1116, 1161, 1486, 1689
HpySE526I	ACGT	2 cut(s)	234, 1060
Hsp92I	GRCGYC	1 cut(s)	1848
Hsp92II	CATG	9 cut(s)	317, 436, 488, 497, 602, 887, 1014, 1465, 1681
HspAI	GCGC	2 cut(s)	140, 1275
Kpn2I	TCCGGA	2 cut(s)	1549, 1857
Kzo9I	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
LguI	GCTCTTC	2 cut(s)	243, 1809
LmnI	GCTCC	3 cut(s)	306, 1657, 1860
Lsp1109I	GCAGC	4 cut(s)	240, 640, 816, 1720
LweI	GCATC	7 cut(s)	158, 256, 499, 919, 1510, 1692, 1741
MaeI	CTAG	3 cut(s)	114, 864, 1506
MaeII	ACGT	2 cut(s)	234, 1060
MaeIII	GTNAC	3 cut(s)	568, 959, 1501
MalI	GATC	8 cut(s)	18, 549, 582, 861, 978, 997, 1171, 1626
MbiI	CCGCTC	2 cut(s)	106, 1485
MboI	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
MflI	RGATCY	3 cut(s)	547, 1169, 1624
MhlI	GDGCHC	1 cut(s)	11
MlyI	GAGTC	4 cut(s)	118, 219, 1172, 1225
MmeI	TCCRAC	1 cut(s)	1412
Mph1103I	ATGCAT	3 cut(s)	151, 271, 1525
MroI	TCCGGA	2 cut(s)	1549, 1857
MroXI	GAANNNNTTC	4 cut(s)	234, 1305, 1369, 1818
MseI	TTAA	6 cut(s)	740, 807, 1077, 1251, 1769, 1802
MslI	CAYNNNNRTG	2 cut(s)	431, 495
MspI	CCGG	2 cut(s)	1550, 1858
MspR9I	CCNGG	4 cut(s)	28, 605, 819, 1852
Mva1269I	GAATGC	1 cut(s)	1735
MvaI	CCWGG	4 cut(s)	28, 605, 819, 1852
MvnI	CGCG	2 cut(s)	240, 748
MwoI	GCNNNNNNNGC	9 cut(s)	146, 213, 266, 1061, 1274, 1451, 1657, 1760, 1816
NcoI	CCATGG	1 cut(s)	1010
NdeI	CATATG	2 cut(s)	327, 381
NdeII	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
NlaIII	CATG	9 cut(s)	317, 436, 488, 497, 602, 887, 1014, 1465, 1681
NlaIV	GGNNCC	3 cut(s)	9, 1008, 1856
NmeAIII	GCCGAG	2 cut(s)	233, 1789
NruI	TCGCGA	1 cut(s)	240
NsbI	TGCGCA	1 cut(s)	1276
NsiI	ATGCAT	3 cut(s)	151, 271, 1525
NspI	RCATGY	1 cut(s)	1681
PaeI	GCATGC	1 cut(s)	1681
PagI	TCATGA	1 cut(s)	1461
PceI	AGGCCT	1 cut(s)	31
PciSI	GCTCTTC	2 cut(s)	243, 1809
PctI	GAATGC	1 cut(s)	1735
PdmI	GAANNNNTTC	4 cut(s)	234, 1305, 1369, 1818
PfeI	GAWTC	5 cut(s)	671, 708, 880, 1411, 1422
PfoI	TCCNGGA	2 cut(s)	603, 817
PkrI	GCNGC	4 cut(s)	255, 655, 831, 1735
PleI	GAGTC	4 cut(s)	118, 218, 1171, 1225
PpsI	GAGTC	4 cut(s)	118, 218, 1171, 1225
PshBI	ATTAAT	1 cut(s)	807
Psp6I	CCWGG	4 cut(s)	26, 603, 817, 1850
PspGI	CCWGG	4 cut(s)	26, 603, 817, 1850
PspN4I	GGNNCC	3 cut(s)	9, 1008, 1856
PspOMI	GGGCCC	1 cut(s)	7
PspPI	GGNCC	6 cut(s)	7, 8, 516, 815, 1007, 1354
PstI	CTGCAG	1 cut(s)	258
PstNI	CAGNNNCTG	2 cut(s)	1172, 1397
PsuI	RGATCY	3 cut(s)	547, 1169, 1624
RruI	TCGCGA	1 cut(s)	240
RsaI	GTAC	3 cut(s)	967, 1395, 1641
RsaNI	GTAC	3 cut(s)	966, 1394, 1640
RseI	CAYNNNNRTG	2 cut(s)	431, 495
SapI	GCTCTTC	2 cut(s)	243, 1809
SaqAI	TTAA	6 cut(s)	740, 807, 1077, 1251, 1769, 1802
SatI	GCNGC	4 cut(s)	254, 654, 830, 1734
Sau3AI	GATC	8 cut(s)	16, 547, 580, 859, 976, 995, 1169, 1624
Sau96I	GGNCC	6 cut(s)	7, 8, 516, 815, 1007, 1354
SchI	GAGTC	4 cut(s)	118, 219, 1172, 1225
ScrFI	CCNGG	4 cut(s)	28, 605, 819, 1852
SduI	GDGCHC	1 cut(s)	11
SfaNI	GCATC	7 cut(s)	158, 256, 499, 919, 1510, 1692, 1741
SfcI	CTRYAG	3 cut(s)	254, 415, 470
SinI	GGWCC	1 cut(s)	815
SmiMI	CAYNNNNRTG	2 cut(s)	431, 495
SmlI	CTYRAG	2 cut(s)	917, 1661
SmoI	CTYRAG	2 cut(s)	917, 1661
SphI	GCATGC	1 cut(s)	1681
SseBI	AGGCCT	1 cut(s)	31
SsiI	CCGC	5 cut(s)	11, 106, 748, 957, 1483
SspI	AATATT	1 cut(s)	1546
SspMI	CTAG	3 cut(s)	114, 864, 1506
StuI	AGGCCT	1 cut(s)	31
StyD4I	CCNGG	4 cut(s)	26, 603, 817, 1850
StyI	CCWWGG	3 cut(s)	1010, 1426, 1755
TaaI	ACNGT	5 cut(s)	844, 965, 1049, 1091, 1639
TaiI	ACGT	2 cut(s)	237, 1063
TaqI	TCGA	6 cut(s)	274, 612, 858, 927, 994, 1225
TatI	WGTACW	1 cut(s)	1639
TfiI	GAWTC	5 cut(s)	671, 708, 880, 1411, 1422
Tru1I	TTAA	6 cut(s)	740, 807, 1077, 1251, 1769, 1802
Tru9I	TTAA	6 cut(s)	740, 807, 1077, 1251, 1769, 1802
TscAI	CASTG	7 cut(s)	847, 940, 1096, 1162, 1452, 1494, 1642
TseI	GCWGC	4 cut(s)	253, 653, 829, 1733
TspDTI	ATGAA	7 cut(s)	309, 477, 790, 872, 1314, 1450, 1581
TspRI	CASTG	7 cut(s)	847, 940, 1096, 1162, 1452, 1494, 1642
VpaK11BI	GGWCC	1 cut(s)	815
VspI	ATTAAT	1 cut(s)	807
XapI	RAATTY	6 cut(s)	91, 158, 446, 632, 715, 947
XceI	RCATGY	1 cut(s)	1681
XmnI	GAANNNNTTC	4 cut(s)	234, 1305, 1369, 1818
XspI	CTAG	3 cut(s)	114, 864, 1506
Zsp2I	ATGCAT	3 cut(s)	151, 271, 1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.