pycom05g05420

Phosphatidylinositol phosphatidylcholine transfer protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
6500489 .. 6505549
5061 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g05420.8

Sequence Viewer

Length: 1473 bp
ATGGAGGATTTTGAGTTCAAAGAGTTGAATGAAGTTCTAAAGCACTACCCTCATGGGCATCATGGTGTGGATAAGGAGGGAAGGCCCGTTTACATTGAAAGATTGGGTAAAGTAGATCCCAATAAAGTAATGCAGGTTACGACTATGGATCGGTATGTGAAATACCATGTTCAGGAGTTCGAGAAAAACTTTGCAATAAAGTTTCCAGCTTGCACCATTGCTGCAAAGAGGCACATAGATTCAAGCACTACAATTTTAGATGTTCAAGGCGTGGGCTTCAAGAATTTTACGAAGTCTGCACGAGATTTAATTACACGGTTGCAGAACATTGATAATAACAATTACCCTGAGACCCTGTGTCAAATGTTTATCATTAATGCTGGTCCCGGATTTAGGCTGCTGTGGAACACTGTAAAGACTTTTCTCGATCCTAGAACAACATCAAAGATTCATGTTCTTGGAAACAAATATCAGAACAAATTGCTTGAGGTAATCGATGCCAGTGAGTTGCCAGATTTTCTGGGTGGTAACTGTACCTGTGCAGATCAGGGAGGTTGCCTTCGATCTGATAAGGGGCCATGGAAAAACCCTGAGATATTGAAGATGGTTCTAAATGGTGAAGCACGACGTGCAAGGCAAGTTGTTAAAGTCCTAAACAGTGAAGGGAAGGTTCTTGCTTATGCTAAGCCACAATATCCAATGCAGGTAAAGGGAAGTGATACATCCACTGCTGAGTCAGGATCTGAAGCAGAAGATATTGCGCCCCCAAAAGCTTTGAAGAATTATTCACATCTTCAATTGACTCCTGTTCGCGAAGAGGTTAAGGCCGTTGGCAAGGCAAACAGTGCAGGTAATTTCTCTGGTTACGATGAATATGTTCCTATGGTTGACAAAGCTGTTGATGCTAATTGGAAAAAGCAAGTGGTTCTCCCGAGAACTCATTCTTCCAAAGGTCACCTCATAATATCAGGGACACTTCCAGTACCTGACTCCCCTAAGAATCCAGAAGGAATCCAAGGTCGGATTTTGGTTGCACTTATGGCCTTCTTCCTGACTTGTCTCACTCTCTTCCGCTCAGTGGCTTCCCAAGTAACTAGGAAGCTTCCTGATGCATTGGTTAATCACAATCAAAATATTCCGGAAAGCACTTTTGATGAAGCAAACAAGGAAGAGGGTCGTCCTTCTTCACCAACAACATCAATTACTGGGACTGATCTTCTACCCTCTGTACTGAAAAAGCTGGTGGAGCTTGAGGAGAAGGTTGACATGCTCCAAGCTAAGCCATCTGAGATGCCTTATGATAAAGCAGAATTGCTGAATGCTGCTGTTTGCCGGGTAGATGCCTTGGAAGCAGAGTTAATTGCCACTAAAAAGGCTCTGCACGAGGCTTTGATGAGGCAAGAAGAGCTTCTGGCTTATATTGACAGGCAAGAAGACGCCAAGCTCCGGAAAAAGAAGTTTTTTTGCTGGTAG

Protein Analysis

491

Amino Acids

54.91

Weight (kDa)

8.23

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 124, 694, 839
AccBSI CCGCTC 1 cut(s) 1074
AccII CGCG 1 cut(s) 813
AccIII TCCGGA 2 cut(s) 1138, 1446
AciI CCGC 1 cut(s) 1072
AclWI GGATC 4 cut(s) 110, 156, 422, 748
AcsI RAATTY 1 cut(s) 283
AcuI CTGAAG 1 cut(s) 765
AcyI GRCGYC 1 cut(s) 1437
AdeI CACNNNGTG 1 cut(s) 629
AfaI GTAC 3 cut(s) 535, 984, 1230
AfiI CCNNNNNNNGG 4 cut(s) 172, 393, 1078, 1446
AgsI TTSAA 9 cut(s) 19, 28, 98, 243, 266, 280, 601, 778, 797
AhdI GACNNNNNGTC 1 cut(s) 357
AjiI CACGTC 1 cut(s) 629
AloI GAACNNNNNNTCC 1 cut(s) 31
AluBI AGCT 9 cut(s) 209, 773, 896, 1102, 1240, 1249, 1277, 1408, 1444
AluI AGCT 9 cut(s) 209, 773, 896, 1102, 1240, 1249, 1277, 1408, 1444
Alw26I GTCTC 2 cut(s) 344, 1064
AlwI GGATC 4 cut(s) 110, 156, 422, 748
AlwNI CAGNNNCTG 2 cut(s) 743, 986
Ama87I CYCGRG 1 cut(s) 931
Aor13HI TCCGGA 2 cut(s) 1138, 1446
AoxI GGCC 4 cut(s) 83, 575, 825, 1041
ApeKI GCWGC 3 cut(s) 221, 397, 1322
ApoI RAATTY 1 cut(s) 283
AseI ATTAAT 1 cut(s) 375
Asp700I GAANNNNTTC 3 cut(s) 876, 940, 1407
AspLEI GCGC 1 cut(s) 763
AspS9I GGNCC 3 cut(s) 84, 383, 575
AsuC2I CCSGG 2 cut(s) 387, 1334
AsuHPI GGTGA 3 cut(s) 629, 947, 1179
AvaI CYCGRG 1 cut(s) 931
AvaII GGWCC 1 cut(s) 383
BauI CACGAG 2 cut(s) 300, 1382
BbsI GAAGAC 1 cut(s) 1440
BbvI GCAGC 3 cut(s) 208, 384, 1309
BccI CCATC 2 cut(s) 598, 1291
BceAI ACGGC 1 cut(s) 812
BcnI CCSGG 2 cut(s) 387, 1334
BcoDI GTCTC 2 cut(s) 344, 1064
BfaI CTAG 2 cut(s) 432, 1095
BfuAI ACCTGC 3 cut(s) 124, 694, 839
BisI GCNGC 3 cut(s) 222, 398, 1323
BlpI GCTNAGC 2 cut(s) 684, 1278
BlsI GCNGC 3 cut(s) 223, 399, 1324
Bme1390I CCNGG 2 cut(s) 387, 1334
Bme18I GGWCC 1 cut(s) 383
BmeRI GACNNNNNGTC 1 cut(s) 357
BmeT110I CYCGRG 1 cut(s) 931
BmgBI CACGTC 1 cut(s) 629
BmgT120I GGNCC 3 cut(s) 84, 383, 575
BmiI GGNNCC 2 cut(s) 385, 576
BmrFI CCNGG 2 cut(s) 387, 1334
BmrI ACTGGG 1 cut(s) 1215
BmsI GCATC 6 cut(s) 67, 487, 892, 1099, 1281, 1330
BmuI ACTGGG 1 cut(s) 1215
BpiI GAAGAC 1 cut(s) 1440
Bpu1102I GCTNAGC 2 cut(s) 684, 1278
BpuEI CTTGAG 2 cut(s) 506, 1271
BpuMI CCSGG 2 cut(s) 387, 1334
Bsa29I ATCGAT 1 cut(s) 495
BsaHI GRCGYC 1 cut(s) 1437
BsaI GGTCTC 1 cut(s) 344
BsaJI CCNNGG 3 cut(s) 578, 1015, 1344
BsaWI WCCGGW 2 cut(s) 1138, 1446
Bsc4I CCNNNNNNNGG 4 cut(s) 172, 393, 1078, 1446
Bse1I ACTGG 3 cut(s) 501, 980, 1210
Bse3DI GCAATG 1 cut(s) 216
BseAI TCCGGA 2 cut(s) 1138, 1446
BseCI ATCGAT 1 cut(s) 495
BseDI CCNNGG 3 cut(s) 578, 1015, 1344
BseGI GGATG 1 cut(s) 722
BseLI CCNNNNNNNGG 4 cut(s) 172, 393, 1078, 1446
BseMI GCAATG 1 cut(s) 216
BseMII CTCAG 5 cut(s) 339, 582, 723, 1089, 1278
BseNI ACTGG 3 cut(s) 501, 980, 1210
BseRI GAGGAG 1 cut(s) 1268
BseXI GCAGC 3 cut(s) 208, 384, 1309
BsgI GTGCAG 4 cut(s) 282, 561, 867, 1364
Bsh1236I CGCG 1 cut(s) 813
BshFI GGCC 4 cut(s) 85, 577, 827, 1043
BshVI ATCGAT 1 cut(s) 495
BsiHKCI CYCGRG 1 cut(s) 931
BsiSI CCGG 4 cut(s) 387, 1139, 1333, 1447
BslFI GGGAC 3 cut(s) 369, 985, 1222
BslI CCNNNNNNNGG 4 cut(s) 172, 393, 1078, 1446
BsmAI GTCTC 2 cut(s) 344, 1064
BsmFI GGGAC 3 cut(s) 369, 985, 1222
BsmI GAATGC 1 cut(s) 1324
BsnI GGCC 4 cut(s) 85, 577, 827, 1043
Bso31I GGTCTC 1 cut(s) 344
BsoBI CYCGRG 1 cut(s) 931
Bsp13I TCCGGA 2 cut(s) 1138, 1446
Bsp143I GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
Bsp1720I GCTNAGC 2 cut(s) 684, 1278
Bsp19I CCATGG 1 cut(s) 578
Bsp68I TCGCGA 1 cut(s) 813
BspACI CCGC 1 cut(s) 1072
BspANI GGCC 4 cut(s) 85, 577, 827, 1043
BspCNI CTCAG 5 cut(s) 340, 583, 724, 1088, 1279
BspDI ATCGAT 1 cut(s) 495
BspEI TCCGGA 2 cut(s) 1138, 1446
BspFNI CGCG 1 cut(s) 813
BspLI GGNNCC 2 cut(s) 385, 576
BspMI ACCTGC 3 cut(s) 124, 694, 839
BspPI GGATC 4 cut(s) 110, 156, 422, 748
BspQI GCTCTTC 1 cut(s) 1398
BspTNI GGTCTC 1 cut(s) 344
BsrBI CCGCTC 1 cut(s) 1074
BsrDI GCAATG 1 cut(s) 216
BsrI ACTGG 3 cut(s) 501, 980, 1210
BssECI CCNNGG 3 cut(s) 578, 1015, 1344
BssMI GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
BssNI GRCGYC 1 cut(s) 1437
BssSI CACGAG 2 cut(s) 300, 1382
BssT1I CCWWGG 3 cut(s) 578, 1015, 1344
Bst2BI CACGAG 2 cut(s) 300, 1382
Bst4CI ACNGT 5 cut(s) 318, 412, 533, 659, 845
Bst6I CTCTTC 4 cut(s) 810, 1073, 1164, 1398
BstACI GRCGYC 1 cut(s) 1437
BstAPI GCANNNNNTGC 2 cut(s) 629, 845
BstC8I GCNNGC 1 cut(s) 211
BstDEI CTNAG 8 cut(s) 348, 591, 684, 732, 996, 1075, 1278, 1287
BstDSI CCRYGG 1 cut(s) 578
BstEII GGTNACC 1 cut(s) 953
BstF5I GGATG 1 cut(s) 722
BstFNI CGCG 1 cut(s) 813
BstHHI GCGC 1 cut(s) 763
BstKTI GATC 7 cut(s) 118, 151, 430, 547, 566, 743, 1216
BstMAI GTCTC 2 cut(s) 344, 1064
BstMBI GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
BstMWI GCNNNNNNNGC 7 cut(s) 629, 845, 902, 1040, 1246, 1349, 1405
BstNSI RCATGY 1 cut(s) 1270
BstPI GGTNACC 1 cut(s) 953
BstSCI CCNGG 2 cut(s) 385, 1332
BstUI CGCG 1 cut(s) 813
BstV1I GCAGC 3 cut(s) 208, 384, 1309
BstV2I GAAGAC 1 cut(s) 1440
BstX2I RGATCY 2 cut(s) 115, 740
BstYI RGATCY 2 cut(s) 115, 740
Bsu15I ATCGAT 1 cut(s) 495
BsuRI GGCC 4 cut(s) 85, 577, 827, 1043
BsuTUI ATCGAT 1 cut(s) 495
BtgI CCRYGG 1 cut(s) 578
BtrI CACGTC 1 cut(s) 629
BtsCI GGATG 1 cut(s) 722
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 6 cut(s) 408, 508, 664, 726, 850, 1083
BtuMI TCGCGA 1 cut(s) 813
BveI ACCTGC 3 cut(s) 124, 694, 839
Cac8I GCNNGC 1 cut(s) 211
CaiI CAGNNNCTG 2 cut(s) 743, 986
CfoI GCGC 1 cut(s) 763
Cfr13I GGNCC 3 cut(s) 84, 383, 575
ClaI ATCGAT 1 cut(s) 495
CseI GACGC 1 cut(s) 1445
Csp6I GTAC 3 cut(s) 534, 983, 1229
CviAII CATG 6 cut(s) 53, 62, 167, 452, 579, 1267
CviQI GTAC 3 cut(s) 534, 983, 1229
DdeI CTNAG 8 cut(s) 348, 591, 684, 732, 996, 1075, 1278, 1287
DpnI GATC 7 cut(s) 117, 150, 429, 546, 565, 742, 1215
DpnII GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
DraIII CACNNNGTG 1 cut(s) 629
DriI GACNNNNNGTC 1 cut(s) 357
Eam1104I CTCTTC 4 cut(s) 810, 1073, 1164, 1398
Eam1105I GACNNNNNGTC 1 cut(s) 357
EarI CTCTTC 4 cut(s) 810, 1073, 1164, 1398
Eco130I CCWWGG 3 cut(s) 578, 1015, 1344
Eco31I GGTCTC 1 cut(s) 344
Eco47I GGWCC 1 cut(s) 383
Eco57I CTGAAG 1 cut(s) 765
Eco88I CYCGRG 1 cut(s) 931
Eco91I GGTNACC 1 cut(s) 953
EcoO65I GGTNACC 1 cut(s) 953
EcoT14I CCWWGG 3 cut(s) 578, 1015, 1344
EcoT22I ATGCAT 1 cut(s) 1114
ErhI CCWWGG 3 cut(s) 578, 1015, 1344
FaeI CATG 6 cut(s) 56, 65, 170, 455, 582, 1270
FalI AAGNNNNNCTT 2 cut(s) 1392, 1424
FaqI GGGAC 3 cut(s) 369, 985, 1222
FatI CATG 6 cut(s) 52, 61, 166, 451, 578, 1266
Fnu4HI GCNGC 3 cut(s) 222, 398, 1323
FokI GGATG 1 cut(s) 709
Fsp4HI GCNGC 3 cut(s) 222, 398, 1323
FspBI CTAG 2 cut(s) 432, 1095
GlaI GCGC 1 cut(s) 762
GluI GCNGC 3 cut(s) 222, 398, 1323
HaeIII GGCC 4 cut(s) 85, 577, 827, 1043
HapII CCGG 4 cut(s) 387, 1139, 1333, 1447
HgaI GACGC 1 cut(s) 1445
HhaI GCGC 1 cut(s) 763
Hin1I GRCGYC 1 cut(s) 1437
Hin1II CATG 6 cut(s) 56, 65, 170, 455, 582, 1270
Hin6I GCGC 1 cut(s) 761
HinP1I GCGC 1 cut(s) 761
HincII GTYRAC 2 cut(s) 889, 1264
HindII GTYRAC 2 cut(s) 889, 1264
HindIII AAGCTT 2 cut(s) 771, 1100
HinfI GANTC 7 cut(s) 239, 448, 734, 802, 989, 1000, 1011
HpaII CCGG 4 cut(s) 387, 1139, 1333, 1447
HphI GGTGA 3 cut(s) 629, 947, 1179
Hpy166II GTNNAC 3 cut(s) 91, 889, 1264
Hpy188I TCNGA 5 cut(s) 474, 568, 745, 1023, 1288
Hpy8I GTNNAC 3 cut(s) 91, 889, 1264
Hpy99I CGWCG 1 cut(s) 630
HpyAV CCTTC 8 cut(s) 75, 569, 656, 661, 1001, 1054, 1191, 1252
HpyCH4III ACNGT 5 cut(s) 318, 412, 533, 659, 845
HpyCH4IV ACGT 1 cut(s) 628
HpyF10VI GCNNNNNNNGC 7 cut(s) 629, 845, 902, 1040, 1246, 1349, 1405
HpyF3I CTNAG 8 cut(s) 348, 591, 684, 732, 996, 1075, 1278, 1287
HpySE526I ACGT 1 cut(s) 628
Hsp92I GRCGYC 1 cut(s) 1437
Hsp92II CATG 6 cut(s) 56, 65, 170, 455, 582, 1270
HspAI GCGC 1 cut(s) 761
Kpn2I TCCGGA 2 cut(s) 1138, 1446
Kzo9I GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
LguI GCTCTTC 1 cut(s) 1398
LmnI GCTCC 3 cut(s) 1246, 1275, 1449
Lsp1109I GCAGC 3 cut(s) 208, 384, 1309
LweI GCATC 6 cut(s) 67, 487, 892, 1099, 1281, 1330
MaeI CTAG 2 cut(s) 432, 1095
MaeII ACGT 1 cut(s) 628
MaeIII GTNAC 5 cut(s) 136, 527, 863, 953, 1090
MalI GATC 7 cut(s) 117, 150, 429, 546, 565, 742, 1215
MbiI CCGCTC 1 cut(s) 1074
MboI GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
MfeI CAATTG 1 cut(s) 797
MflI RGATCY 2 cut(s) 115, 740
MlyI GAGTC 3 cut(s) 743, 796, 983
MmeI TCCRAC 1 cut(s) 1001
Mph1103I ATGCAT 1 cut(s) 1114
MroI TCCGGA 2 cut(s) 1138, 1446
MroXI GAANNNNTTC 3 cut(s) 876, 940, 1407
MseI TTAA 6 cut(s) 308, 375, 645, 822, 1119, 1358
MslI CAYNNNNRTG 1 cut(s) 63
MspI CCGG 4 cut(s) 387, 1139, 1333, 1447
MspR9I CCNGG 2 cut(s) 387, 1334
MunI CAATTG 1 cut(s) 797
Mva1269I GAATGC 1 cut(s) 1324
MvnI CGCG 1 cut(s) 813
MwoI GCNNNNNNNGC 7 cut(s) 629, 845, 902, 1040, 1246, 1349, 1405
NciI CCSGG 2 cut(s) 387, 1334
NcoI CCATGG 1 cut(s) 578
NdeII GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
NlaIII CATG 6 cut(s) 56, 65, 170, 455, 582, 1270
NlaIV GGNNCC 2 cut(s) 385, 576
NmuCI GTSAC 1 cut(s) 953
NruI TCGCGA 1 cut(s) 813
NsiI ATGCAT 1 cut(s) 1114
NspI RCATGY 1 cut(s) 1270
PciSI GCTCTTC 1 cut(s) 1398
PctI GAATGC 1 cut(s) 1324
PdmI GAANNNNTTC 3 cut(s) 876, 940, 1407
PfeI GAWTC 4 cut(s) 239, 448, 1000, 1011
PfoI TCCNGGA 1 cut(s) 385
PkrI GCNGC 3 cut(s) 223, 399, 1324
PleI GAGTC 3 cut(s) 742, 796, 983
PpsI GAGTC 3 cut(s) 742, 796, 983
PshBI ATTAAT 1 cut(s) 375
PspEI GGTNACC 1 cut(s) 953
PspN4I GGNNCC 2 cut(s) 385, 576
PspPI GGNCC 3 cut(s) 84, 383, 575
PstNI CAGNNNCTG 2 cut(s) 743, 986
PsuI RGATCY 2 cut(s) 115, 740
RruI TCGCGA 1 cut(s) 813
RsaI GTAC 3 cut(s) 535, 984, 1230
RsaNI GTAC 3 cut(s) 534, 983, 1229
RseI CAYNNNNRTG 1 cut(s) 63
SapI GCTCTTC 1 cut(s) 1398
SaqAI TTAA 6 cut(s) 308, 375, 645, 822, 1119, 1358
SatI GCNGC 3 cut(s) 222, 398, 1323
Sau3AI GATC 7 cut(s) 115, 148, 427, 544, 563, 740, 1213
Sau96I GGNCC 3 cut(s) 84, 383, 575
SchI GAGTC 3 cut(s) 743, 796, 983
ScrFI CCNGG 2 cut(s) 387, 1334
SfaNI GCATC 6 cut(s) 67, 487, 892, 1099, 1281, 1330
SinI GGWCC 1 cut(s) 383
SmiMI CAYNNNNRTG 1 cut(s) 63
SmlI CTYRAG 2 cut(s) 485, 1250
SmoI CTYRAG 2 cut(s) 485, 1250
SsiI CCGC 1 cut(s) 1072
SspI AATATT 1 cut(s) 1135
SspMI CTAG 2 cut(s) 432, 1095
StyD4I CCNGG 2 cut(s) 385, 1332
StyI CCWWGG 3 cut(s) 578, 1015, 1344
TaaI ACNGT 5 cut(s) 318, 412, 533, 659, 845
TaiI ACGT 1 cut(s) 631
TaqI TCGA 4 cut(s) 180, 426, 495, 562
TatI WGTACW 1 cut(s) 1228
TfiI GAWTC 4 cut(s) 239, 448, 1000, 1011
Tru1I TTAA 6 cut(s) 308, 375, 645, 822, 1119, 1358
Tru9I TTAA 6 cut(s) 308, 375, 645, 822, 1119, 1358
TscAI CASTG 6 cut(s) 415, 508, 664, 733, 850, 1083
TseFI GTSAC 1 cut(s) 953
TseI GCWGC 3 cut(s) 221, 397, 1322
Tsp45I GTSAC 1 cut(s) 953
TspDTI ATGAA 4 cut(s) 45, 440, 885, 1170
TspRI CASTG 6 cut(s) 415, 508, 664, 733, 850, 1083
VpaK11BI GGWCC 1 cut(s) 383
VspI ATTAAT 1 cut(s) 375
XapI RAATTY 1 cut(s) 283
XceI RCATGY 1 cut(s) 1270
XmnI GAANNNNTTC 3 cut(s) 876, 940, 1407
XspI CTAG 2 cut(s) 432, 1095
Zsp2I ATGCAT 1 cut(s) 1114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.