Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008261

Physical Location & Seq

Genomic Coordinates Forward (+)

48333819 .. 48345077

Gene Structure 11259 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014159

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGTCGGGCCCACTTGATCGGTTCGCTAGGCCATGTTTTGAAGGGTTTTATGGTAGTGATGAGAGAAGAGAAAGGAAGTCTGATTTTGAGAACTCCGAGGATGAGCGGAGGACTAGAATCGGGACTCTGAAGAAGAAGGCCATAAATGCGTCTACTAAATTTAAGCATTCTCTCAAGAAAAAGGGTAGTAGAAGAAAAAGTGATGGCAGAGTCAGCTCTGTTTCTATTGAAGATGTTCGCGATGTTGAAGAGCTACAGGCTGTTGATGCATTTCGACAATCACTAATTTTGGATGAATTGCTGCCGGACAAACACGATGACTATCATATGATGTTGAGAATATTACATTTGACTTGGGAAACTGTGCTCTCGACTGATACACTCGATTTTGAGTTCAAAGAATTGGATGATGTTCTTAACTATTATCCTCATGGGCATCATGGTGTGGATAAGGAGGGAAGACCAGTTTATGTTGAAAGGTTAGGGAAAGTAGATCCCAACAAATTAATGCAAGTTACCACTATGGATCGCTATGTGAAATACCATGTGCAGGAGTTTGAGAAAAGCTTTGCAATAAAGTTTCCGGCTTGTACTATTGCTGCAAAGAGGCACATAGATTCAAGCACTACAATCTTAGATGTTCATGGCGTGGGCTTCAAGAACTTTACAAAGTCTGCACGAGAACTAATTATGCGGTTGCAGAAGGTGGATGGTGATAACTATCCTGAGGTTCTTGGAAACAAATACCAAAGCAAATTGCTTGAGATAATTGATGCCAGCGAGTTGCCAGAATTTCTGGGTGGAAGCTGTACCTGTGCAGATCAGGGAGGTTGTCTTCGCTCTGACAAGGGGCCCTGGAAAAACCCTGACATCTTGAAGATGGTTCTTAGTGGTGAAGCACGGCGTGCAAGGCAGGTTGTTAAAGTCCTAAACAGTGAGGGGAAATTTCTTGCTTATGCTAAGCCACACTACCCAATGCAGGTAAAGGGTAGCGATACATCGACTGCTGAGTCGGGATCTGAAGCGGAGGATATTGCATCCCCGAAAGCTTTGAAGAGTTATTCACATCTTCGATTGACTCCTGTTCGAGAAGAGGCTAAGGTCGTAGGCAAGGCAAGCTGTGCAGGAAGCTTCTCAGGTTATGATGAATATGTTCCTATGGTTGACAAAGCTGTTGATGCTGGTTGGAAAAAGCAAGCTTCCCTGCAAAAATCTCATTCTCCCAAAGGAACACTTCCAGTACCTAACATCCCAAAAGATCCTGAAGGAATTCGAGCTCGGATTTTGGTAGCGGTTATGGCCTTCTTACTGACTTTTCTCGCACTCTTCCGCTCAGTTGCTTCCCACATAACTAGGAAGCTTCCTGACACATTGGCTAATAAAGAACAAAATGTTACTGAATCAACTTTTGATGCAACAAACAAGGAAGAGTGCGGTCCTCCTTCACCAAAATCACCATTTGCAGGAGTAGATCTTCTTCCCACTGTACTGAAGAAACTGGCTGAGCTTGAGGAGAAGGTTGATACGCTCCAATCTAAACCATCTGAGATGCCTTATGAGAAGGAGGAACTGCTGAATGCCGCTGTTTGTCGTGTGGATGCCTTGGAAGCAGAGTTAATTGCTACTAAAAAGGCTCTCCATGAAGCTTTAATGAGGCAAGAAGAGTTGCTGGCTTATATAGACAGGCAAGAAGAAGCCAAATTCCGGAAAAAGAAGTTTTGCTGGATCCCAAGCAAACTAGTCGAAAACTTAGGTTTCGAGGGTTTGAGTTTCAACAACGGTGGTGCCATTTCCGGGGTGGAGCGGCGCTTAACGTCGCCAGCTTCCTCACATCTTGTTTTGGGGTGGGAGGCCGGATTCGTTTGTCCGGTTGAACGGCAGGACTTTCGCGATGGTGTGGTGGAAGGGCCGACCACCGGAGCTAACGCCACTGGCTGGGGCGGTGATGGGCAGGACGCAAAGCATAGCGCCAGATATCAAACCACATCGTCTCCAACACCACCGGCCAGCCTCACTTTCTCCGCTCTCAGCCGAAATAAAACTACTCCCAAGTCTTCATCATCAGCTTTCTCATCCCCCTCCTCACCTAACTGTCTGACTCCGTCTAAACATGTCAACCATGACAACTGTGAACGTTCCCTCTCAGTGCATGCTCAGAAATGCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008525 GO:0008526 GO:0009653 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048193 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0071702 GO:0071840 GO:0071944 GO:0120009 GO:0120010 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

723

Amino Acids

80.19

Weight (kDa)

8.06

Isoelectric Point (pI)

49.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO	PF00650	141 - 248	5.3e-10	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21520 AT2G21520 AT2G21520 AT4G39170 AT4G39170
fragaria_vesca	FvH4_2g09500
malus_domestica	MD05G1062600.v1.1 MD10G1070300.v1.1
prunus_persica	Prupe.8G091900_v2.0.a1 Prupe.8G091900_v2.0.a1
pyrus_communis	pycom05g05420 pycom10g05610
rosa_chinensis	RchiOBHm_Chr6g0265801
rosa_laevigata	RLG00000014159
rosa_multiflora	Rmu_sc0000208.1_g000031
rosa_roxburghii	Rroxscaffold_7G00202380
rosa_rugosa	Rorug06G0019600 Rorug06G0019700
rosa_samantha	Rh6AG141700 Rh6BG141700 Rh6CG138300 Rh6DG125300
rosa_wichuraiana	Rw6G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1009
Acc36I	ACCTGC	2 cut(s)	904, 970
AccB1I	GGYRCC	1 cut(s)	1784
AccB7I	CCANNNNNTGG	1 cut(s)	1935
AccBSI	CCGCTC	4 cut(s)	106, 1332, 1804, 2024
AccI	GTMKAC	1 cut(s)	152
AccII	CGCG	2 cut(s)	240, 1890
AccIII	TCCGGA	1 cut(s)	1704
AclI	AACGTT	1 cut(s)	2134
AclWI	GGATC	6 cut(s)	488, 534, 1024, 1253, 1720, 1733
AcoI	YGGCCR	1 cut(s)	2004
AcsI	RAATTY	5 cut(s)	158, 791, 944, 1269, 1700
AcuI	CTGAAG	4 cut(s)	149, 1041, 1284, 1511
AdeI	CACNNNGTG	1 cut(s)	905
AfaI	GTAC	4 cut(s)	592, 811, 1242, 1488
AfiI	CCNNNNNNNGG	7 cut(s)	550, 979, 1463, 1704, 1794, 1916, 1935
AflIII	ACRYGT	1 cut(s)	2110
AhlI	ACTAGT	1 cut(s)	1738
AjnI	CCWGG	1 cut(s)	854
Alw21I	GWGCWC	2 cut(s)	369, 1279
Alw26I	GTCTC	1 cut(s)	1995
AlwI	GGATC	6 cut(s)	488, 534, 1024, 1253, 1720, 1733
Aor13HI	TCCGGA	1 cut(s)	1704
AoxI	GGCC	8 cut(s)	7, 29, 138, 851, 1299, 1851, 1907, 2004
ApaI	GGGCCC	2 cut(s)	11, 855
ApeKI	GCWGC	2 cut(s)	301, 599
ApoI	RAATTY	5 cut(s)	158, 791, 944, 1269, 1700
AseI	ATTAAT	1 cut(s)	506
Asp700I	GAANNNNTTC	3 cut(s)	234, 1152, 1269
AspLEI	GCGC	2 cut(s)	1809, 1970
AspS9I	GGNCC	6 cut(s)	7, 8, 851, 852, 1436, 1907
AsuC2I	CCSGG	1 cut(s)	1795
AsuHPI	GGTGA	6 cut(s)	725, 905, 1437, 1446, 1955, 2076
AvaII	GGWCC	1 cut(s)	1436
AxyI	CCTNAGG	1 cut(s)	726
BaeGI	GKGCMC	2 cut(s)	11, 855
BamHI	GGATCC	1 cut(s)	1725
BanI	GGYRCC	1 cut(s)	1784
BanII	GRGCYC	3 cut(s)	11, 855, 1279
BarI	GAAGNNNNNNTAC	2 cut(s)	1461, 1493
BauI	CACGAG	1 cut(s)	678
BbsI	GAAGAC	3 cut(s)	466, 827, 2046
Bbv12I	GWGCWC	2 cut(s)	369, 1279
BbvI	GCAGC	2 cut(s)	288, 586
BccI	CCATC	6 cut(s)	197, 704, 874, 1549, 1886, 1940
BceAI	ACGGC	2 cut(s)	917, 1892
BcgI	CGANNNNNNTGC	4 cut(s)	1723, 1757, 1868, 1902
BciT130I	CCWGG	1 cut(s)	856
BcnI	CCSGG	1 cut(s)	1795
BcoDI	GTCTC	1 cut(s)	1995
BcuI	ACTAGT	1 cut(s)	1738
BfaI	CTAG	4 cut(s)	27, 114, 1353, 1739
BfmI	CTRYAG	1 cut(s)	254
BfoI	RGCGCY	2 cut(s)	1810, 1971
BfuAI	ACCTGC	2 cut(s)	904, 970
BglII	AGATCT	1 cut(s)	1471
BisI	GCNGC	4 cut(s)	302, 600, 1581, 1805
BlpI	GCTNAGC	2 cut(s)	960, 1503
BlsI	GCNGC	4 cut(s)	303, 601, 1582, 1806
Bme1390I	CCNGG	2 cut(s)	856, 1795
Bme18I	GGWCC	1 cut(s)	1436
BmgT120I	GGNCC	6 cut(s)	7, 8, 851, 852, 1436, 1907
BmiI	GGNNCC	5 cut(s)	9, 852, 853, 1727, 1786
BmrFI	CCNGG	2 cut(s)	856, 1795
BmsI	GCATC	8 cut(s)	256, 445, 763, 1046, 1168, 1402, 1539, 1588
BpiI	GAAGAC	3 cut(s)	466, 827, 2046
Bpu10I	CCTNAGC	1 cut(s)	1098
Bpu1102I	GCTNAGC	2 cut(s)	960, 1503
BpuEI	CTTGAG	3 cut(s)	158, 782, 1529
BpuMI	CCSGG	1 cut(s)	1795
BsaBI	GATNNNNATC	2 cut(s)	321, 720
BsaJI	CCNNGG	4 cut(s)	96, 854, 1602, 1794
BsaWI	WCCGGW	3 cut(s)	1704, 1867, 1916
BsaXI	ACNNNNNCTCC	2 cut(s)	1975, 2005
Bsc4I	CCNNNNNNNGG	7 cut(s)	550, 979, 1463, 1704, 1794, 1916, 1935
Bse118I	RCCGGY	1 cut(s)	2002
Bse1I	ACTGG	4 cut(s)	464, 1238, 1503, 1936
Bse21I	CCTNAGG	1 cut(s)	726
Bse8I	GATNNNNATC	2 cut(s)	321, 720
BseAI	TCCGGA	1 cut(s)	1704
BseBI	CCWGG	1 cut(s)	856
BseDI	CCNNGG	4 cut(s)	96, 854, 1602, 1794
BseGI	GGATG	8 cut(s)	106, 298, 412, 715, 1037, 1248, 1603, 2072
BseJI	GATNNNNATC	2 cut(s)	321, 720
BseLI	CCNNNNNNNGG	7 cut(s)	550, 979, 1463, 1704, 1794, 1916, 1935
BseMII	CTCAG	9 cut(s)	717, 999, 1149, 1347, 1494, 1536, 2041, 2157, 2168
BseNI	ACTGG	4 cut(s)	464, 1238, 1503, 1936
BseRI	GAGGAG	2 cut(s)	1526, 2071
BseSI	GKGCMC	2 cut(s)	11, 855
BseXI	GCAGC	2 cut(s)	288, 586
BseYI	CCCAGC	1 cut(s)	1935
BsgI	GTGCAG	4 cut(s)	569, 660, 837, 1143
Bsh1236I	CGCG	2 cut(s)	240, 1890
BshFI	GGCC	8 cut(s)	9, 31, 140, 853, 1301, 1853, 1909, 2006
BshNI	GGYRCC	1 cut(s)	1784
BsiHKAI	GWGCWC	2 cut(s)	369, 1279
BsiSI	CCGG	8 cut(s)	305, 584, 1705, 1794, 1854, 1868, 1917, 2003
BslFI	GGGAC	1 cut(s)	136
BslI	CCNNNNNNNGG	7 cut(s)	550, 979, 1463, 1704, 1794, 1916, 1935
BsmAI	GTCTC	1 cut(s)	1995
BsmBI	CGTCTC	1 cut(s)	1995
BsmFI	GGGAC	1 cut(s)	136
BsmI	GAATGC	2 cut(s)	166, 1582
BsnI	GGCC	8 cut(s)	9, 31, 140, 853, 1301, 1853, 1909, 2006
Bsp120I	GGGCCC	2 cut(s)	7, 851
Bsp1286I	GDGCHC	4 cut(s)	11, 369, 855, 1279
Bsp13I	TCCGGA	1 cut(s)	1704
Bsp143I	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
Bsp1720I	GCTNAGC	2 cut(s)	960, 1503
Bsp68I	TCGCGA	2 cut(s)	240, 1890
BspANI	GGCC	8 cut(s)	9, 31, 140, 853, 1301, 1853, 1909, 2006
BspCNI	CTCAG	9 cut(s)	718, 1000, 1148, 1346, 1495, 1537, 2040, 2156, 2167
BspEI	TCCGGA	1 cut(s)	1704
BspFNI	CGCG	2 cut(s)	240, 1890
BspLI	GGNNCC	5 cut(s)	9, 852, 853, 1727, 1786
BspMI	ACCTGC	2 cut(s)	904, 970
BspPI	GGATC	6 cut(s)	488, 534, 1024, 1253, 1720, 1733
BspQI	GCTCTTC	1 cut(s)	243
BspT107I	GGYRCC	1 cut(s)	1784
BsrBI	CCGCTC	4 cut(s)	106, 1332, 1804, 2024
BsrFI	RCCGGY	1 cut(s)	2002
BsrI	ACTGG	4 cut(s)	464, 1238, 1503, 1936
BssAI	RCCGGY	1 cut(s)	2002
BssECI	CCNNGG	4 cut(s)	96, 854, 1602, 1794
BssMI	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
BssSI	CACGAG	1 cut(s)	678
BssT1I	CCWWGG	1 cut(s)	1602
Bst2BI	CACGAG	1 cut(s)	678
Bst2UI	CCWGG	1 cut(s)	856
Bst4CI	ACNGT	6 cut(s)	364, 935, 1486, 1781, 2093, 2129
Bst6I	CTCTTC	7 cut(s)	61, 243, 1049, 1086, 1331, 1422, 1656
BstAPI	GCANNNNNTGC	2 cut(s)	905, 1121
BstC8I	GCNNGC	8 cut(s)	778, 906, 1117, 1197, 1671, 1821, 2008, 2151
BstF5I	GGATG	8 cut(s)	106, 298, 412, 715, 1037, 1248, 1603, 2072
BstFNI	CGCG	2 cut(s)	240, 1890
BstH2I	RGCGCY	2 cut(s)	1810, 1971
BstHHI	GCGC	2 cut(s)	1809, 1970
BstKTI	GATC	8 cut(s)	19, 496, 529, 823, 1019, 1261, 1474, 1728
BstMAI	GTCTC	1 cut(s)	1995
BstMBI	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
BstNI	CCWGG	1 cut(s)	856
BstNSI	RCATGY	2 cut(s)	2114, 2153
BstSCI	CCNGG	2 cut(s)	854, 1793
BstSFI	CTRYAG	1 cut(s)	254
BstSLI	GKGCMC	2 cut(s)	11, 855
BstUI	CGCG	2 cut(s)	240, 1890
BstV1I	GCAGC	2 cut(s)	288, 586
BstV2I	GAAGAC	3 cut(s)	466, 827, 2046
BstX2I	RGATCY	5 cut(s)	493, 1016, 1258, 1471, 1725
BstYI	RGATCY	5 cut(s)	493, 1016, 1258, 1471, 1725
Bsu36I	CCTNAGG	1 cut(s)	726
BsuRI	GGCC	8 cut(s)	9, 31, 140, 853, 1301, 1853, 1909, 2006
BtgZI	GCGATG	2 cut(s)	255, 1905
BtsCI	GGATG	8 cut(s)	106, 298, 412, 715, 1037, 1248, 1603, 2072
BtsIMutI	CAGTG	4 cut(s)	940, 1482, 1929, 2151
BtuMI	TCGCGA	2 cut(s)	240, 1890
BveI	ACCTGC	2 cut(s)	904, 970
Cac8I	GCNNGC	8 cut(s)	778, 906, 1117, 1197, 1671, 1821, 2008, 2151
CfoI	GCGC	2 cut(s)	1809, 1970
Cfr10I	RCCGGY	1 cut(s)	2002
Cfr13I	GGNCC	6 cut(s)	7, 8, 851, 852, 1436, 1907
CseI	GACGC	2 cut(s)	138, 1964
Csp6I	GTAC	4 cut(s)	591, 810, 1241, 1487
CspCI	CAANNNNNGTGG	2 cut(s)	1762, 1797
CviAII	CATG	9 cut(s)	33, 431, 440, 545, 644, 1640, 2111, 2120, 2150
CviQI	GTAC	4 cut(s)	591, 810, 1241, 1487
DpnI	GATC	8 cut(s)	18, 495, 528, 822, 1018, 1260, 1473, 1727
DpnII	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
DraIII	CACNNNGTG	1 cut(s)	905
DrdI	GACNNNNNNGTC	1 cut(s)	1009
DseDI	GACNNNNNNGTC	1 cut(s)	1009
EaeI	YGGCCR	1 cut(s)	2004
Eam1104I	CTCTTC	7 cut(s)	61, 243, 1049, 1086, 1331, 1422, 1656
EarI	CTCTTC	7 cut(s)	61, 243, 1049, 1086, 1331, 1422, 1656
Ecl136II	GAGCTC	1 cut(s)	1277
Eco130I	CCWWGG	1 cut(s)	1602
Eco24I	GRGCYC	3 cut(s)	11, 855, 1279
Eco32I	GATATC	1 cut(s)	1976
Eco47I	GGWCC	1 cut(s)	1436
Eco53kI	GAGCTC	1 cut(s)	1277
Eco57I	CTGAAG	4 cut(s)	149, 1041, 1284, 1511
Eco81I	CCTNAGG	1 cut(s)	726
EcoICRI	GAGCTC	1 cut(s)	1277
EcoO109I	RGGNCCY	2 cut(s)	851, 852
EcoRI	GAATTC	1 cut(s)	1269
EcoRII	CCWGG	1 cut(s)	854
EcoRV	GATATC	1 cut(s)	1976
EcoT14I	CCWWGG	1 cut(s)	1602
EcoT22I	ATGCAT	1 cut(s)	271
EcoT38I	GRGCYC	3 cut(s)	11, 855, 1279
ErhI	CCWWGG	1 cut(s)	1602
Esp3I	CGTCTC	1 cut(s)	1995
FaeI	CATG	9 cut(s)	36, 434, 443, 548, 647, 1643, 2114, 2123, 2153
FalI	AAGNNNNNCTT	2 cut(s)	1218, 1250
FaqI	GGGAC	1 cut(s)	136
FatI	CATG	9 cut(s)	32, 430, 439, 544, 643, 1639, 2110, 2119, 2149
FauNDI	CATATG	1 cut(s)	327
FblI	GTMKAC	1 cut(s)	152
Fnu4HI	GCNGC	4 cut(s)	302, 600, 1581, 1805
FokI	GGATG	8 cut(s)	113, 305, 419, 722, 1024, 1235, 1610, 2059
FriOI	GRGCYC	3 cut(s)	11, 855, 1279
Fsp4HI	GCNGC	4 cut(s)	302, 600, 1581, 1805
FspBI	CTAG	4 cut(s)	27, 114, 1353, 1739
GlaI	GCGC	2 cut(s)	1808, 1969
GluI	GCNGC	4 cut(s)	302, 600, 1581, 1805
GsaI	CCCAGC	1 cut(s)	1939
HaeII	RGCGCY	2 cut(s)	1810, 1971
HaeIII	GGCC	8 cut(s)	9, 31, 140, 853, 1301, 1853, 1909, 2006
HapII	CCGG	8 cut(s)	305, 584, 1705, 1794, 1854, 1868, 1917, 2003
HgaI	GACGC	2 cut(s)	138, 1964
HhaI	GCGC	2 cut(s)	1809, 1970
Hin1II	CATG	9 cut(s)	36, 434, 443, 548, 647, 1643, 2114, 2123, 2153
Hin6I	GCGC	2 cut(s)	1807, 1968
HinP1I	GCGC	2 cut(s)	1807, 1968
HincII	GTYRAC	2 cut(s)	1165, 2116
HindII	GTYRAC	2 cut(s)	1165, 2116
HindIII	AAGCTT	6 cut(s)	565, 1047, 1129, 1197, 1358, 1644
HinfI	GANTC	9 cut(s)	117, 124, 210, 617, 1010, 1078, 1400, 1857, 2098
HpaII	CCGG	8 cut(s)	305, 584, 1705, 1794, 1854, 1868, 1917, 2003
HphI	GGTGA	6 cut(s)	725, 905, 1437, 1446, 1955, 2076
Hpy166II	GTNNAC	4 cut(s)	153, 1165, 2116, 2132
Hpy188I	TCNGA	9 cut(s)	82, 97, 129, 844, 1021, 1281, 1546, 2097, 2157
Hpy8I	GTNNAC	4 cut(s)	153, 1165, 2116, 2132
Hpy99I	CGWCG	1 cut(s)	1819
HpyAV	CCTTC	9 cut(s)	35, 130, 697, 1259, 1312, 1452, 1510, 1555, 1898
HpyCH4III	ACNGT	6 cut(s)	364, 935, 1486, 1781, 2093, 2129
HpyCH4IV	ACGT	2 cut(s)	1814, 2134
HpySE526I	ACGT	2 cut(s)	1814, 2134
Hsp92II	CATG	9 cut(s)	36, 434, 443, 548, 647, 1643, 2114, 2123, 2153
HspAI	GCGC	2 cut(s)	1807, 1968
Kpn2I	TCCGGA	1 cut(s)	1704
Kzo9I	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
LguI	GCTCTTC	1 cut(s)	243
LmnI	GCTCC	3 cut(s)	1533, 1801, 1919
Lsp1109I	GCAGC	2 cut(s)	288, 586
LweI	GCATC	8 cut(s)	256, 445, 763, 1046, 1168, 1402, 1539, 1588
MaeI	CTAG	4 cut(s)	27, 114, 1353, 1739
MaeII	ACGT	2 cut(s)	1814, 2134
MaeIII	GTNAC	2 cut(s)	514, 1393
MalI	GATC	8 cut(s)	18, 495, 528, 822, 1018, 1260, 1473, 1727
MbiI	CCGCTC	4 cut(s)	106, 1332, 1804, 2024
MboI	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
MflI	RGATCY	5 cut(s)	493, 1016, 1258, 1471, 1725
MhlI	GDGCHC	4 cut(s)	11, 369, 855, 1279
MlyI	GAGTC	5 cut(s)	118, 219, 1019, 1072, 2092
MmeI	TCCRAC	2 cut(s)	1166, 2018
Mph1103I	ATGCAT	1 cut(s)	271
MroI	TCCGGA	1 cut(s)	1704
MroXI	GAANNNNTTC	3 cut(s)	234, 1152, 1269
MseI	TTAA	7 cut(s)	162, 417, 506, 921, 1616, 1649, 1811
MslI	CAYNNNNRTG	1 cut(s)	441
MspA1I	CMGCKG	1 cut(s)	1583
MspI	CCGG	8 cut(s)	305, 584, 1705, 1794, 1854, 1868, 1917, 2003
MspR9I	CCNGG	2 cut(s)	856, 1795
Mva1269I	GAATGC	2 cut(s)	166, 1582
MvaI	CCWGG	1 cut(s)	856
MvnI	CGCG	2 cut(s)	240, 1890
NciI	CCSGG	1 cut(s)	1795
NdeI	CATATG	1 cut(s)	327
NdeII	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
NlaIII	CATG	9 cut(s)	36, 434, 443, 548, 647, 1643, 2114, 2123, 2153
NlaIV	GGNNCC	5 cut(s)	9, 852, 853, 1727, 1786
NruI	TCGCGA	2 cut(s)	240, 1890
NsiI	ATGCAT	1 cut(s)	271
NspI	RCATGY	2 cut(s)	2114, 2153
PaeI	GCATGC	1 cut(s)	2153
PciI	ACATGT	1 cut(s)	2110
PciSI	GCTCTTC	1 cut(s)	243
PctI	GAATGC	2 cut(s)	166, 1582
PdmI	GAANNNNTTC	3 cut(s)	234, 1152, 1269
PfeI	GAWTC	4 cut(s)	117, 617, 1400, 1857
PflFI	GACNNNGTC	1 cut(s)	2101
PflMI	CCANNNNNTGG	1 cut(s)	1935
PkrI	GCNGC	4 cut(s)	303, 601, 1582, 1806
PleI	GAGTC	5 cut(s)	118, 218, 1018, 1072, 2092
PpsI	GAGTC	5 cut(s)	118, 218, 1018, 1072, 2092
PscI	ACATGT	1 cut(s)	2110
PshBI	ATTAAT	1 cut(s)	506
Psp124BI	GAGCTC	1 cut(s)	1279
Psp1406I	AACGTT	1 cut(s)	2134
Psp6I	CCWGG	1 cut(s)	854
PspFI	CCCAGC	1 cut(s)	1935
PspGI	CCWGG	1 cut(s)	854
PspN4I	GGNNCC	5 cut(s)	9, 852, 853, 1727, 1786
PspOMI	GGGCCC	2 cut(s)	7, 851
PspPI	GGNCC	6 cut(s)	7, 8, 851, 852, 1436, 1907
PsuI	RGATCY	5 cut(s)	493, 1016, 1258, 1471, 1725
PsyI	GACNNNGTC	1 cut(s)	2101
RruI	TCGCGA	2 cut(s)	240, 1890
RsaI	GTAC	4 cut(s)	592, 811, 1242, 1488
RsaNI	GTAC	4 cut(s)	591, 810, 1241, 1487
RseI	CAYNNNNRTG	1 cut(s)	441
SacI	GAGCTC	1 cut(s)	1279
SapI	GCTCTTC	1 cut(s)	243
SaqAI	TTAA	7 cut(s)	162, 417, 506, 921, 1616, 1649, 1811
SatI	GCNGC	4 cut(s)	302, 600, 1581, 1805
Sau3AI	GATC	8 cut(s)	16, 493, 526, 820, 1016, 1258, 1471, 1725
Sau96I	GGNCC	6 cut(s)	7, 8, 851, 852, 1436, 1907
SchI	GAGTC	5 cut(s)	118, 219, 1019, 1072, 2092
ScrFI	CCNGG	2 cut(s)	856, 1795
SduI	GDGCHC	4 cut(s)	11, 369, 855, 1279
SfaNI	GCATC	8 cut(s)	256, 445, 763, 1046, 1168, 1402, 1539, 1588
SfcI	CTRYAG	1 cut(s)	254
SinI	GGWCC	1 cut(s)	1436
SmiMI	CAYNNNNRTG	1 cut(s)	441
SmlI	CTYRAG	3 cut(s)	173, 761, 1508
SmoI	CTYRAG	3 cut(s)	173, 761, 1508
SpeI	ACTAGT	1 cut(s)	1738
SphI	GCATGC	1 cut(s)	2153
SspI	AATATT	1 cut(s)	342
SspMI	CTAG	4 cut(s)	27, 114, 1353, 1739
SstI	GAGCTC	1 cut(s)	1279
StyD4I	CCNGG	2 cut(s)	854, 1793
StyI	CCWWGG	1 cut(s)	1602
TaaI	ACNGT	6 cut(s)	364, 935, 1486, 1781, 2093, 2129
TaiI	ACGT	2 cut(s)	1817, 2137
TaqI	TCGA	9 cut(s)	274, 371, 384, 1001, 1072, 1087, 1273, 1743, 1758
TatI	WGTACW	2 cut(s)	590, 1486
TauI	GCSGC	2 cut(s)	1583, 1807
TfiI	GAWTC	4 cut(s)	117, 617, 1400, 1857
Tru1I	TTAA	7 cut(s)	162, 417, 506, 921, 1616, 1649, 1811
Tru9I	TTAA	7 cut(s)	162, 417, 506, 921, 1616, 1649, 1811
TscAI	CASTG	4 cut(s)	940, 1489, 1936, 2151
TseI	GCWGC	2 cut(s)	301, 599
TspDTI	ATGAA	5 cut(s)	309, 632, 1161, 1656, 2046
TspGWI	ACGGA	1 cut(s)	2091
TspRI	CASTG	4 cut(s)	940, 1489, 1936, 2151
Tth111I	GACNNNGTC	1 cut(s)	2101
Van91I	CCANNNNNTGG	1 cut(s)	1935
VpaK11BI	GGWCC	1 cut(s)	1436
VspI	ATTAAT	1 cut(s)	506
XapI	RAATTY	5 cut(s)	158, 791, 944, 1269, 1700
XceI	RCATGY	2 cut(s)	2114, 2153
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1795
XmiI	GTMKAC	1 cut(s)	152
XmnI	GAANNNNTTC	3 cut(s)	234, 1152, 1269
XspI	CTAG	4 cut(s)	27, 114, 1353, 1739
Zsp2I	ATGCAT	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.