Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0004335

Physical Location & Seq

Genomic Coordinates Reverse (-)

15106404 .. 15109684

Gene Structure 3281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1096200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 957 bp

ATGGAAGGTAAATCGTACCAGAGACTCCCGCGCGTCAAAATCCGCGAAATGCGTGACGACTACTTGAAGTTCGAGCTCCGCGACACCGACGCCAGCGTCGCCAACGCGCTCCGGCGCGTGATGATCGCCGAGGTCCCCACTGTCGCCATCGATCTTGTCGAGATCGAGATCAACTCCTCCGTCCTCAACGACGAGTTCATCGCCCACCGACTCGGTCTCATCCCCCTCACCTCCGACCGGGCCATGAGCATGCGCTTCTCACGTGACTGCGACGCCTGCGACGGTGACGGACAGTGCGAGTTCTGCTCCGTCGAGTTTCACCTCCGCGCCAAGTGCCACTCCGACCAAACCCTAGATGTCACCAGCAAGGACCTCCTCAGCTCCGACCACACCGTGGTCCCCGTTGATTTCTCTGATTCCTCCGGCTTCGAATCCTCCGAACAGAAGGGAATTATAATTGTGAAGTTGCGAAGGGGGCAAGAGCTGAGGCTGAGGGCCATTGCCAGAAAGGGGATTGGCAAAGATCATGCTAAGTGGTCGCCCGCGGCCACTGTCACTTTCATGTATGAACCCGACATTCGAATCAATGAGGAGCTGATGGATACTTTGACTCTTGAGGAGAAGAAGGCTTGGGTTGAGAGTAGTCCCACCAAGGTCTTTGACATTGATCCTAAAACCGACAAGGTCGTGGTGGTTGATCCTGAAGCATACACCTATGATGATGAAGTGATCAAGAAAGCAGAAGCTATGGGGAAGTCTGGGCTTGTGGATATCACTGCAAGAGAAGATAGCTTTATATTCACAGTGGAATCTACCGGTGCGATTAAAGCTGCTCAGTTGCTCCTTAATGCTATAGAAGTCCTGAAACAGAAGCTGGATGCAGTGCGCCTTTCTGAGGATACTGTAGAAGCAGATGACCAGTTTGGTGAATTAGGTGCACATATGCGAGGAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000418 GO:0000419 GO:0000428 GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005665 GO:0005730 GO:0005737 GO:0007275 GO:0007389 GO:0008150 GO:0009791 GO:0009888 GO:0010374 GO:0010375 GO:0016591 GO:0030880 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048856 GO:0055029 GO:0061695 GO:0070013 GO:0090558 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko05016 ko05169 map00230 map00240 map01100 map03020 map05016 map05169

Pfam Domains

Protein Families

RNA_pol_A_bac RNA_pol_L

Protein Analysis

319

Amino Acids

35.57

Weight (kDa)

4.88

Isoelectric Point (pI)

34.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNA_pol_L	PF01193	23 - 292	5.6e-21	RNA polymerase Rpb3/Rpb11 dimerisation domain
RNA_pol_A_bac	PF01000	55 - 178	4.3e-20	RNA polymerase Rpb3/RpoA insert domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15400 AT2G15400 AT2G15430 AT2G15430 AT2G15430
fragaria_vesca	FvH4_2g05450
malus_domestica	MD05G1087400.v1.1 MD10G1096200.v1.1
prunus_persica	Prupe.8G132000_v2.0.a1 Prupe.8G132000_v2.0.a1 Prupe.8G132400_v2.0.a1
pyrus_communis	pycom05g08690
rosa_chinensis	RchiOBHm_Chr5g0063881 RchiOBHm_Chr6g0255731
rosa_laevigata	RLG00000014818 RLG00000027736
rosa_multiflora	Rmu_sc0009240.1_g000038 Rmu_ssc0000136.1_g000018
rosa_roxburghii	Rroxscaffold_7G00209720
rosa_rugosa	Rorug05G0560800 Rorug06G0006400
rosa_samantha	Rh1DG021100 Rh2DG345600 Rh2DG346900 Rh5CG269200 Rh6AG078900 Rh6BG072000 Rh6CG070100 Rh6DG067300 Rh7AG302700 Rh7CG321200
rosa_wichuraiana	Rw6G006800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	455
AasI	GACNNNNNNGTC	1 cut(s)	95
AccB7I	CCANNNNNTGG	1 cut(s)	394
AccII	CGCG	8 cut(s)	31, 33, 45, 81, 107, 117, 327, 545
AciI	CCGC	6 cut(s)	29, 43, 79, 325, 543, 545
AclWI	GGATC	2 cut(s)	662, 692
AcoI	YGGCCR	1 cut(s)	546
AcuI	CTGAAG	1 cut(s)	723
AcvI	CACGTG	1 cut(s)	263
AcyI	GRCGYC	2 cut(s)	90, 273
AdeI	CACNNNGTG	1 cut(s)	394
AfaI	GTAC	1 cut(s)	17
AfiI	CCNNNNNNNGG	4 cut(s)	237, 394, 510, 895
AgeI	ACCGGT	1 cut(s)	815
AgsI	TTSAA	1 cut(s)	67
AluBI	AGCT	8 cut(s)	76, 381, 484, 595, 746, 792, 830, 874
AluI	AGCT	8 cut(s)	76, 381, 484, 595, 746, 792, 830, 874
Alw21I	GWGCWC	2 cut(s)	78, 940
Alw26I	GTCTC	2 cut(s)	16, 221
Alw44I	GTGCAC	1 cut(s)	936
AlwI	GGATC	2 cut(s)	662, 692
AlwNI	CAGNNNCTG	1 cut(s)	874
AoxI	GGCC	3 cut(s)	240, 495, 546
ApaLI	GTGCAC	1 cut(s)	936
ApeKI	GCWGC	1 cut(s)	830
AsiGI	ACCGGT	1 cut(s)	815
AspLEI	GCGC	6 cut(s)	33, 109, 117, 255, 329, 888
AspS9I	GGNCC	5 cut(s)	133, 240, 370, 397, 495
AsuC2I	CCSGG	1 cut(s)	239
AsuHPI	GGTGA	5 cut(s)	220, 296, 311, 352, 938
AsuII	TTCGAA	2 cut(s)	429, 580
AvaII	GGWCC	3 cut(s)	133, 370, 397
BaeGI	GKGCMC	1 cut(s)	940
BanII	GRGCYC	1 cut(s)	78
BbrPI	CACGTG	1 cut(s)	263
Bbv12I	GWGCWC	2 cut(s)	78, 940
BbvCI	CCTCAGC	3 cut(s)	377, 485, 491
BbvI	GCAGC	1 cut(s)	817
BccI	CCATC	2 cut(s)	155, 592
BciVI	GTATCC	2 cut(s)	595, 892
BclI	TGATCA	1 cut(s)	729
BcnI	CCSGG	1 cut(s)	239
BcoDI	GTCTC	2 cut(s)	16, 221
BfaI	CTAG	1 cut(s)	353
BfmI	CTRYAG	2 cut(s)	852, 903
BfuI	GTATCC	2 cut(s)	595, 892
BisI	GCNGC	2 cut(s)	546, 831
BlsI	GCNGC	2 cut(s)	547, 832
Bme1390I	CCNGG	1 cut(s)	239
Bme18I	GGWCC	3 cut(s)	133, 370, 397
BmgT120I	GGNCC	5 cut(s)	133, 240, 370, 397, 495
BmiI	GGNNCC	2 cut(s)	135, 399
BmrFI	CCNGG	1 cut(s)	239
BmsI	GCATC	1 cut(s)	868
BplI	GAGNNNNNCTC	4 cut(s)	158, 190, 290, 322
Bpu10I	CCTNAGC	3 cut(s)	377, 485, 491
Bpu14I	TTCGAA	2 cut(s)	429, 580
BpuEI	CTTGAG	1 cut(s)	635
BpuMI	CCSGG	1 cut(s)	239
Bsa29I	ATCGAT	1 cut(s)	150
BsaAI	YACGTR	1 cut(s)	263
BsaBI	GATNNNNATC	1 cut(s)	167
BsaHI	GRCGYC	2 cut(s)	90, 273
BsaI	GGTCTC	1 cut(s)	221
BsaJI	CCNNGG	4 cut(s)	129, 393, 543, 651
BsaWI	WCCGGW	1 cut(s)	815
Bsc4I	CCNNNNNNNGG	4 cut(s)	237, 394, 510, 895
Bse118I	RCCGGY	1 cut(s)	815
Bse1I	ACTGG	1 cut(s)	919
Bse3DI	GCAATG	1 cut(s)	498
Bse8I	GATNNNNATC	1 cut(s)	167
BseCI	ATCGAT	1 cut(s)	150
BseDI	CCNNGG	4 cut(s)	129, 393, 543, 651
BseGI	GGATG	2 cut(s)	219, 883
BseJI	GATNNNNATC	1 cut(s)	167
BseLI	CCNNNNNNNGG	4 cut(s)	237, 394, 510, 895
BseMI	GCAATG	1 cut(s)	498
BseMII	CTCAG	5 cut(s)	391, 476, 482, 848, 885
BseNI	ACTGG	1 cut(s)	919
BseRI	GAGGAG	4 cut(s)	166, 365, 605, 632
BseSI	GKGCMC	1 cut(s)	940
BseXI	GCAGC	1 cut(s)	817
Bsh1236I	CGCG	8 cut(s)	31, 33, 45, 81, 107, 117, 327, 545
Bsh1285I	CGRYCG	1 cut(s)	238
BshFI	GGCC	3 cut(s)	242, 497, 548
BshTI	ACCGGT	1 cut(s)	815
BshVI	ATCGAT	1 cut(s)	150
BsiEI	CGRYCG	1 cut(s)	238
BsiHKAI	GWGCWC	2 cut(s)	78, 940
BsiSI	CCGG	4 cut(s)	112, 238, 423, 816
BslFI	GGGAC	3 cut(s)	119, 383, 630
BslI	CCNNNNNNNGG	4 cut(s)	237, 394, 510, 895
BsmAI	GTCTC	2 cut(s)	16, 221
BsmFI	GGGAC	3 cut(s)	119, 383, 630
BsnI	GGCC	3 cut(s)	242, 497, 548
Bso31I	GGTCTC	1 cut(s)	221
Bsp119I	TTCGAA	2 cut(s)	429, 580
Bsp1286I	GDGCHC	2 cut(s)	78, 940
Bsp143I	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
BspACI	CCGC	6 cut(s)	29, 43, 79, 325, 543, 545
BspANI	GGCC	3 cut(s)	242, 497, 548
BspCNI	CTCAG	5 cut(s)	390, 477, 483, 847, 886
BspDI	ATCGAT	1 cut(s)	150
BspFNI	CGCG	8 cut(s)	31, 33, 45, 81, 107, 117, 327, 545
BspLI	GGNNCC	2 cut(s)	135, 399
BspPI	GGATC	2 cut(s)	662, 692
BspT104I	TTCGAA	2 cut(s)	429, 580
BspTNI	GGTCTC	1 cut(s)	221
BsrDI	GCAATG	1 cut(s)	498
BsrFI	RCCGGY	1 cut(s)	815
BsrI	ACTGG	1 cut(s)	919
BssAI	RCCGGY	1 cut(s)	815
BssECI	CCNNGG	4 cut(s)	129, 393, 543, 651
BssMI	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
BssNI	GRCGYC	2 cut(s)	90, 273
BssT1I	CCWWGG	1 cut(s)	651
Bst4CI	ACNGT	7 cut(s)	142, 284, 294, 394, 553, 805, 904
BstACI	GRCGYC	2 cut(s)	90, 273
BstBAI	YACGTR	1 cut(s)	263
BstBI	TTCGAA	2 cut(s)	429, 580
BstC8I	GCNNGC	4 cut(s)	94, 251, 277, 543
BstDEI	CTNAG	6 cut(s)	377, 485, 491, 531, 834, 894
BstDSI	CCRYGG	2 cut(s)	393, 543
BstENI	CCTNNNNNAGG	1 cut(s)	893
BstF5I	GGATG	2 cut(s)	219, 883
BstFNI	CGCG	8 cut(s)	31, 33, 45, 81, 107, 117, 327, 545
BstHHI	GCGC	6 cut(s)	33, 109, 117, 255, 329, 888
BstKTI	GATC	8 cut(s)	126, 154, 165, 171, 526, 670, 700, 732
BstMAI	GTCTC	2 cut(s)	16, 221
BstMBI	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
BstMCI	CGRYCG	1 cut(s)	238
BstMWI	GCNNNNNNNGC	6 cut(s)	98, 276, 303, 333, 475, 827
BstNSI	RCATGY	1 cut(s)	253
BstSCI	CCNGG	1 cut(s)	237
BstSFI	CTRYAG	2 cut(s)	852, 903
BstSLI	GKGCMC	1 cut(s)	940
BstUI	CGCG	8 cut(s)	31, 33, 45, 81, 107, 117, 327, 545
BstV1I	GCAGC	1 cut(s)	817
Bsu15I	ATCGAT	1 cut(s)	150
BsuI	GTATCC	2 cut(s)	595, 892
BsuRI	GGCC	3 cut(s)	242, 497, 548
BsuTUI	ATCGAT	1 cut(s)	150
BtgI	CCRYGG	2 cut(s)	393, 543
BtgZI	GCGATG	1 cut(s)	184
BtsCI	GGATG	2 cut(s)	219, 883
BtsI	GCAGTG	2 cut(s)	774, 888
BtsIMutI	CAGTG	6 cut(s)	138, 299, 549, 774, 810, 888
Cac8I	GCNNGC	4 cut(s)	94, 251, 277, 543
CaiI	CAGNNNCTG	1 cut(s)	874
CfoI	GCGC	6 cut(s)	33, 109, 117, 255, 329, 888
Cfr10I	RCCGGY	1 cut(s)	815
Cfr13I	GGNCC	5 cut(s)	133, 240, 370, 397, 495
Cfr42I	CCGCGG	1 cut(s)	546
ClaI	ATCGAT	1 cut(s)	150
CseI	GACGC	4 cut(s)	22, 85, 98, 281
Csp6I	GTAC	1 cut(s)	16
CspAI	ACCGGT	1 cut(s)	815
CviAII	CATG	4 cut(s)	244, 250, 527, 562
CviQI	GTAC	1 cut(s)	16
DdeI	CTNAG	6 cut(s)	377, 485, 491, 531, 834, 894
DpnI	GATC	8 cut(s)	125, 153, 164, 170, 525, 669, 699, 731
DpnII	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
DraIII	CACNNNGTG	1 cut(s)	394
DrdI	GACNNNNNNGTC	1 cut(s)	95
DseDI	GACNNNNNNGTC	1 cut(s)	95
EaeI	YGGCCR	1 cut(s)	546
Ecl136II	GAGCTC	1 cut(s)	76
Eco130I	CCWWGG	1 cut(s)	651
Eco24I	GRGCYC	1 cut(s)	78
Eco31I	GGTCTC	1 cut(s)	221
Eco32I	GATATC	1 cut(s)	772
Eco47I	GGWCC	3 cut(s)	133, 370, 397
Eco53kI	GAGCTC	1 cut(s)	76
Eco57I	CTGAAG	1 cut(s)	723
Eco72I	CACGTG	1 cut(s)	263
EcoICRI	GAGCTC	1 cut(s)	76
EcoNI	CCTNNNNNAGG	1 cut(s)	893
EcoO109I	RGGNCCY	2 cut(s)	133, 370
EcoRV	GATATC	1 cut(s)	772
EcoT14I	CCWWGG	1 cut(s)	651
EcoT38I	GRGCYC	1 cut(s)	78
ErhI	CCWWGG	1 cut(s)	651
FaeI	CATG	4 cut(s)	247, 253, 530, 565
FaqI	GGGAC	3 cut(s)	119, 383, 630
FatI	CATG	4 cut(s)	243, 249, 526, 561
FauI	CCCGC	2 cut(s)	36, 550
FauNDI	CATATG	1 cut(s)	942
FbaI	TGATCA	1 cut(s)	729
Fnu4HI	GCNGC	2 cut(s)	546, 831
FokI	GGATG	2 cut(s)	206, 890
FriOI	GRGCYC	1 cut(s)	78
Fsp4HI	GCNGC	2 cut(s)	546, 831
FspBI	CTAG	1 cut(s)	353
GlaI	GCGC	6 cut(s)	32, 108, 116, 254, 328, 887
GluI	GCNGC	2 cut(s)	546, 831
HaeIII	GGCC	3 cut(s)	242, 497, 548
HapII	CCGG	4 cut(s)	112, 238, 423, 816
HgaI	GACGC	4 cut(s)	22, 85, 98, 281
HhaI	GCGC	6 cut(s)	33, 109, 117, 255, 329, 888
Hin1I	GRCGYC	2 cut(s)	90, 273
Hin1II	CATG	4 cut(s)	247, 253, 530, 565
Hin6I	GCGC	6 cut(s)	31, 107, 115, 253, 327, 886
HinP1I	GCGC	6 cut(s)	31, 107, 115, 253, 327, 886
HinfI	GANTC	7 cut(s)	24, 210, 416, 431, 582, 610, 809
HpaII	CCGG	4 cut(s)	112, 238, 423, 816
HphI	GGTGA	5 cut(s)	220, 296, 311, 352, 938
Hpy166II	GTNNAC	1 cut(s)	938
Hpy188I	TCNGA	6 cut(s)	235, 343, 385, 415, 439, 895
Hpy188III	TCNNGA	6 cut(s)	160, 166, 614, 701, 733, 862
Hpy8I	GTNNAC	1 cut(s)	938
Hpy99I	CGWCG	6 cut(s)	92, 101, 194, 275, 284, 314
HpyAV	CCTTC	3 cut(s)	439, 465, 619
HpyCH4III	ACNGT	7 cut(s)	142, 284, 294, 394, 553, 805, 904
HpyCH4IV	ACGT	1 cut(s)	262
HpyCH4V	TGCA	3 cut(s)	779, 881, 938
HpyF10VI	GCNNNNNNNGC	6 cut(s)	98, 276, 303, 333, 475, 827
HpyF3I	CTNAG	6 cut(s)	377, 485, 491, 531, 834, 894
HpySE526I	ACGT	1 cut(s)	262
Hsp92I	GRCGYC	2 cut(s)	90, 273
Hsp92II	CATG	4 cut(s)	247, 253, 530, 565
HspAI	GCGC	6 cut(s)	31, 107, 115, 253, 327, 886
Ksp22I	TGATCA	1 cut(s)	729
KspI	CCGCGG	1 cut(s)	546
Kzo9I	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
LmnI	GCTCC	6 cut(s)	81, 114, 311, 386, 592, 846
Lsp1109I	GCAGC	1 cut(s)	817
LweI	GCATC	1 cut(s)	868
MaeI	CTAG	1 cut(s)	353
MaeII	ACGT	1 cut(s)	262
MaeIII	GTNAC	5 cut(s)	53, 263, 284, 358, 553
MalI	GATC	8 cut(s)	125, 153, 164, 170, 525, 669, 699, 731
MboI	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
MboII	GAAGA	2 cut(s)	634, 797
MhlI	GDGCHC	2 cut(s)	78, 940
MluCI	AATT	3 cut(s)	450, 456, 929
MlyI	GAGTC	3 cut(s)	18, 204, 604
MmeI	TCCRAC	3 cut(s)	258, 366, 408
MseI	TTAA	2 cut(s)	825, 846
MslI	CAYNNNNRTG	2 cut(s)	248, 560
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	4 cut(s)	112, 238, 423, 816
MspR9I	CCNGG	1 cut(s)	239
MvnI	CGCG	8 cut(s)	31, 33, 45, 81, 107, 117, 327, 545
MwoI	GCNNNNNNNGC	6 cut(s)	98, 276, 303, 333, 475, 827
NciI	CCSGG	1 cut(s)	239
NdeI	CATATG	1 cut(s)	942
NdeII	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
NlaIII	CATG	4 cut(s)	247, 253, 530, 565
NlaIV	GGNNCC	2 cut(s)	135, 399
NmeAIII	GCCGAG	1 cut(s)	154
NmuCI	GTSAC	5 cut(s)	53, 263, 284, 358, 553
NspI	RCATGY	1 cut(s)	253
NspV	TTCGAA	2 cut(s)	429, 580
PaeI	GCATGC	1 cut(s)	253
PcsI	WCGNNNNNNNCGW	4 cut(s)	78, 156, 294, 435
PfeI	GAWTC	4 cut(s)	416, 431, 582, 809
PflFI	GACNNNGTC	2 cut(s)	213, 683
PflMI	CCANNNNNTGG	1 cut(s)	394
PinAI	ACCGGT	1 cut(s)	815
PkrI	GCNGC	2 cut(s)	547, 832
PleI	GAGTC	3 cut(s)	18, 204, 604
PmaCI	CACGTG	1 cut(s)	263
PmlI	CACGTG	1 cut(s)	263
PpsI	GAGTC	3 cut(s)	18, 204, 604
Ppu21I	YACGTR	1 cut(s)	263
PpuMI	RGGWCCY	2 cut(s)	133, 370
PsiI	TTATAA	1 cut(s)	455
Psp124BI	GAGCTC	1 cut(s)	78
Psp5II	RGGWCCY	2 cut(s)	133, 370
PspCI	CACGTG	1 cut(s)	263
PspN4I	GGNNCC	2 cut(s)	135, 399
PspPI	GGNCC	5 cut(s)	133, 240, 370, 397, 495
PspPPI	RGGWCCY	2 cut(s)	133, 370
PstNI	CAGNNNCTG	1 cut(s)	874
PsyI	GACNNNGTC	2 cut(s)	213, 683
RsaI	GTAC	1 cut(s)	17
RsaNI	GTAC	1 cut(s)	16
RseI	CAYNNNNRTG	2 cut(s)	248, 560
SacI	GAGCTC	1 cut(s)	78
SacII	CCGCGG	1 cut(s)	546
SaqAI	TTAA	2 cut(s)	825, 846
SatI	GCNGC	2 cut(s)	546, 831
Sau3AI	GATC	8 cut(s)	123, 151, 162, 168, 523, 667, 697, 729
Sau96I	GGNCC	5 cut(s)	133, 240, 370, 397, 495
SchI	GAGTC	3 cut(s)	18, 204, 604
ScrFI	CCNGG	1 cut(s)	239
SduI	GDGCHC	2 cut(s)	78, 940
SfaNI	GCATC	1 cut(s)	868
SfcI	CTRYAG	2 cut(s)	852, 903
Sfr303I	CCGCGG	1 cut(s)	546
SfuI	TTCGAA	2 cut(s)	429, 580
SgrBI	CCGCGG	1 cut(s)	546
SinI	GGWCC	3 cut(s)	133, 370, 397
SmiMI	CAYNNNNRTG	2 cut(s)	248, 560
SmlI	CTYRAG	1 cut(s)	614
SmoI	CTYRAG	1 cut(s)	614
SphI	GCATGC	1 cut(s)	253
Sse9I	AATT	3 cut(s)	450, 456, 929
SsiI	CCGC	6 cut(s)	29, 43, 79, 325, 543, 545
SspMI	CTAG	1 cut(s)	353
SstI	GAGCTC	1 cut(s)	78
StyD4I	CCNGG	1 cut(s)	237
StyI	CCWWGG	1 cut(s)	651
TaaI	ACNGT	7 cut(s)	142, 284, 294, 394, 553, 805, 904
TaiI	ACGT	1 cut(s)	265
TaqI	TCGA	7 cut(s)	72, 150, 159, 165, 312, 429, 580
TaqII	GACCGA	1 cut(s)	203
TasI	AATT	3 cut(s)	450, 456, 929
TauI	GCSGC	1 cut(s)	548
TfiI	GAWTC	4 cut(s)	416, 431, 582, 809
Tru1I	TTAA	2 cut(s)	825, 846
Tru9I	TTAA	2 cut(s)	825, 846
TscAI	CASTG	6 cut(s)	145, 299, 556, 781, 810, 888
TseFI	GTSAC	5 cut(s)	53, 263, 284, 358, 553
TseI	GCWGC	1 cut(s)	830
Tsp45I	GTSAC	5 cut(s)	53, 263, 284, 358, 553
TspDTI	ATGAA	4 cut(s)	187, 550, 582, 738
TspGWI	ACGGA	3 cut(s)	169, 298, 303
TspRI	CASTG	6 cut(s)	145, 299, 556, 781, 810, 888
Tth111I	GACNNNGTC	2 cut(s)	213, 683
Van91I	CCANNNNNTGG	1 cut(s)	394
VneI	GTGCAC	1 cut(s)	936
VpaK11BI	GGWCC	3 cut(s)	133, 370, 397
XagI	CCTNNNNNAGG	1 cut(s)	893
XceI	RCATGY	1 cut(s)	253
XspI	CTAG	1 cut(s)	353

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.