Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Forward (+)

993098 .. 997558

Gene Structure 4461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0006400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGCGGACGGTGAAGATTCCGGTGCTGTAGCCGCTGAGCTCATCAGGACTAGCACGCCCCTCGACTTCAAGACTCTTCTTTCTACTCCGGTGAGGGACTTTCTTGTTCGCAACAATGGTGATCAGGTTAAGGTTGAAACCTTGAAGGGGAAGAAGCTGGGGTTGTATTTTTCTGCATCATGGGACGGTCGATGTCAACGTTTCACCCCAGATTTGGTGGAGACCTACAATGCACTCGCTCCAAAAGGCGATTTCGAGGTGATCTTTATTTCAGCTGATGAGGATGAGGAGTCGTTCAATGGGTACTTCTCCAAGATGCCGTGGCTTGCAATTCCATTTTCGGATTCTGAGGCACGTGATAGTCTGGATGAGCAGTTCAAGGTGAGAGGGATACCGCATCTTGTGTTCCTTTGTGAAGAAGGGAGAGTTAGGAATGTCAGTGGAGTTGAGATTGTTCGGGAGTATGGAGCTGATGGCTACCCTTTTACCATAGAAAGGTTAAAAGAATTAAAAGAACAAGAAGAGGCAGCTAACAGGGAACAGTCTCTGAAAACAGTCCTGGTCTCCCGTTCACGCGACTTTGTAATTGCATCTGATGGGAAGAAGGTGCCTGTCTCTGAACTTGAAGGGAAGATGGTGGGTCTCTACTTCTCATTGTCTACATTCAGTCCATGCATAGAATTTACTCCAAAACTTGTGGAGGTTTATGAGAAGCTAAAAGCAAAGGGAGAGAGCTTTGAGATTGTGTTTTTATCACTTGATGATGATGAAGAAGCATTTGAACAAGATTGTAAGAACATGCCTTGGTTTGCATTGCCCCAGAAGGACACCAAAACCATTGAGAAGTTGGCTCGGTATTTTGAGCTGTCAACCTTACCCACTTTGGTTATTATTGGGGCAGATGGTAAAACTGTCCATAACAATGTTGTTGAAGCAATTGACGAGCATGGGCTTCTGGCTTACCCCTTCACACCTGAGAAGTTTGCAGAGCTCGCTGAGATAGAGAAAGCACAAACTCTGGAGTCAATTTTGATTTCTGGGGATCAAAACTTTGTCATTGGAAAAGACGGAATCAAGATTCCGGTGTCAGATCTTGTGGGGAAGAACATCCTCCTTTATTTCTCAGCACATTGGTGCCCTCCATACCGTGCCTTTCTACCAAAACTTATGGAAGCCTATCACAAGATCAAGGCAAAGGATGATGCATTTGAAGTTATTTTCATCTCTAGTGACAGGGACCAAGCCTCTTTCGATGACTTTTTCTCTGGAATGCCATGGCTTGCTCTTCCCTTTGGTGACTCAAGAAAAGCATCCTTGAGTCGCCGATTCAAGGTCCAAGGCATCCCGATGCTTGTAGCCATTGGTCCTACTGGTCAAACAGTCACAAAAGAAGCAAGAGATCTCGTTATGCTTCATGGAGCTAATGCTTATCCTTTCACTGAGGAGCGGTTGAAAGAGATAGAAGCAGAATTTGAGGAGATGGCAAAGAGGTGGCCTGAGAAGTTGAAGAATGCACTCCATGAGGAGCATGAGCTTGTGCTCGGTCGCGGAAGAAATTTCACATGTGATGGGTGCAACGAGAAAGGAGAGGTGTGGTCATTCTATTGCGAGGAGTGTAACTTTGATCTCCATCCAAAGTGTGCTCTGGAGGAGGAAAAGGGACCCAAAACTGATGCCAACCCGGAAGAAGATCCCCATCCAAAGTGTGCTTTGGAGGAGGAAAAGGGAACCAAAACTGATGCCAAGCCGGAAGAAGAGCCCCAAGAAGGATGGGTATGCGATGGTGAAGTTTGTAAAAAAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000418 GO:0000419 GO:0000428 GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005665 GO:0005730 GO:0005737 GO:0007275 GO:0007389 GO:0008150 GO:0009791 GO:0009888 GO:0010374 GO:0010375 GO:0016591 GO:0030880 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048856 GO:0055029 GO:0061695 GO:0070013 GO:0090558 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko05016 ko05169 map00230 map00240 map01100 map03020 map05016 map05169

Pfam Domains

Protein Families

RNA_pol_A_bac RNA_pol_L

Protein Analysis

601

Amino Acids

67.85

Weight (kDa)

4.82

Isoelectric Point (pI)

38.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thioredoxin_8	PF13905	50 - 143	1.5e-21	Thioredoxin-like
Thioredoxin_8	PF13905	210 - 303	2.8e-22	Thioredoxin-like
AhpC-TSA	PF00578	355 - 446	4.1e-06	AhpC/TSA family
Thioredoxin_8	PF13905	367 - 459	1.5e-25	Thioredoxin-like
C1_2	PF03107	506 - 548	1.3e-08	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	607, 1134
AccBSI	CCGCTC	1 cut(s)	1447
AccI	GTMKAC	1 cut(s)	659
AccII	CGCG	2 cut(s)	576, 1548
AciI	CCGC	5 cut(s)	5, 33, 395, 1447, 1548
AclI	AACGTT	1 cut(s)	199
AclWI	GGATC	2 cut(s)	1050, 1685
AcsI	RAATTY	3 cut(s)	680, 1469, 1555
AcvI	CACGTG	1 cut(s)	356
AfaI	GTAC	1 cut(s)	305
AfiI	CCNNNNNNNGG	5 cut(s)	147, 214, 495, 1330, 1766
AflIII	ACRYGT	1 cut(s)	1562
AjnI	CCWGG	1 cut(s)	558
AleI	CACNNNNGTG	1 cut(s)	1132
AloI	GAACNNNNNNTCC	2 cut(s)	359, 391
Alw21I	GWGCWC	4 cut(s)	42, 993, 1542, 1645
Alw26I	GTCTC	5 cut(s)	215, 549, 568, 619, 647
AlwI	GGATC	2 cut(s)	1050, 1685
AlwNI	CAGNNNCTG	1 cut(s)	547
AoxI	GGCC	1 cut(s)	1493
ApeKI	GCWGC	1 cut(s)	527
ApoI	RAATTY	3 cut(s)	680, 1469, 1555
AspS9I	GGNCC	4 cut(s)	1237, 1333, 1364, 1661
AsuC2I	CCSGG	1 cut(s)	1682
AsuHPI	GGTGA	8 cut(s)	23, 103, 131, 196, 271, 394, 1307, 1796
AvaII	GGWCC	4 cut(s)	1237, 1333, 1364, 1661
BaeGI	GKGCMC	1 cut(s)	1139
BanI	GGYRCC	2 cut(s)	607, 1134
BanII	GRGCYC	3 cut(s)	42, 993, 1761
BbrPI	CACGTG	1 cut(s)	356
Bbv12I	GWGCWC	4 cut(s)	42, 993, 1542, 1645
BbvI	GCAGC	1 cut(s)	539
BceAI	ACGGC	1 cut(s)	304
BcgI	CGANNNNNNTGC	2 cut(s)	43, 77
BciT130I	CCWGG	1 cut(s)	560
BciVI	GTATCC	1 cut(s)	384
BclI	TGATCA	1 cut(s)	121
BcnI	CCSGG	1 cut(s)	1682
BcoDI	GTCTC	5 cut(s)	215, 549, 568, 619, 647
BfaI	CTAG	2 cut(s)	51, 1227
BfmI	CTRYAG	1 cut(s)	27
BfuI	GTATCC	1 cut(s)	384
BglII	AGATCT	2 cut(s)	1090, 1399
BisI	GCNGC	2 cut(s)	33, 528
BlpI	GCTNAGC	1 cut(s)	36
BlsI	GCNGC	2 cut(s)	34, 529
Bme1390I	CCNGG	2 cut(s)	560, 1682
Bme18I	GGWCC	4 cut(s)	1237, 1333, 1364, 1661
BmgT120I	GGNCC	4 cut(s)	1237, 1333, 1364, 1661
BmiI	GGNNCC	6 cut(s)	609, 1136, 1238, 1662, 1663, 1729
BmrFI	CCNGG	2 cut(s)	560, 1682
BpmI	CTGGAG	2 cut(s)	1040, 1667
Bpu1102I	GCTNAGC	1 cut(s)	36
BpuEI	CTTGAG	2 cut(s)	1285, 1336
BpuMI	CCSGG	1 cut(s)	1682
BsaAI	YACGTR	1 cut(s)	356
BsaBI	GATNNNNATC	2 cut(s)	1629, 1695
BsaI	GGTCTC	3 cut(s)	215, 568, 647
BsaJI	CCNNGG	4 cut(s)	320, 803, 1274, 1336
BsaWI	WCCGGW	3 cut(s)	20, 88, 1081
Bsc4I	CCNNNNNNNGG	5 cut(s)	147, 214, 495, 1330, 1766
Bse1I	ACTGG	1 cut(s)	1375
Bse3DI	GCAATG	1 cut(s)	812
Bse8I	GATNNNNATC	2 cut(s)	1629, 1695
BseBI	CCWGG	1 cut(s)	560
BseDI	CCNNGG	4 cut(s)	320, 803, 1274, 1336
BseGI	GGATG	9 cut(s)	289, 373, 1107, 1204, 1310, 1341, 1630, 1696, 1775
BseJI	GATNNNNATC	2 cut(s)	1629, 1695
BseLI	CCNNNNNNNGG	5 cut(s)	147, 214, 495, 1330, 1766
BseMI	GCAATG	1 cut(s)	812
BseMII	CTCAG	7 cut(s)	27, 339, 966, 987, 1137, 1431, 1488
BseNI	ACTGG	1 cut(s)	1375
BseRI	GAGGAG	7 cut(s)	302, 1457, 1490, 1538, 1625, 1664, 1730
BseSI	GKGCMC	1 cut(s)	1139
BseXI	GCAGC	1 cut(s)	539
BseYI	CCCAGC	1 cut(s)	157
Bsh1236I	CGCG	2 cut(s)	576, 1548
Bsh1285I	CGRYCG	2 cut(s)	190, 1546
BshFI	GGCC	1 cut(s)	1495
BshNI	GGYRCC	2 cut(s)	607, 1134
BsiEI	CGRYCG	2 cut(s)	190, 1546
BsiHKAI	GWGCWC	4 cut(s)	42, 993, 1542, 1645
BsiSI	CCGG	5 cut(s)	21, 89, 1082, 1682, 1748
BslFI	GGGAC	4 cut(s)	110, 197, 1250, 1674
BslI	CCNNNNNNNGG	5 cut(s)	147, 214, 495, 1330, 1766
BsmAI	GTCTC	5 cut(s)	215, 549, 568, 619, 647
BsmFI	GGGAC	4 cut(s)	110, 197, 1250, 1674
BsmI	GAATGC	2 cut(s)	1275, 1516
BsnI	GGCC	1 cut(s)	1495
Bso31I	GGTCTC	3 cut(s)	215, 568, 647
Bsp1286I	GDGCHC	6 cut(s)	42, 993, 1139, 1542, 1645, 1761
Bsp143I	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
Bsp1720I	GCTNAGC	1 cut(s)	36
Bsp19I	CCATGG	1 cut(s)	1274
BspACI	CCGC	5 cut(s)	5, 33, 395, 1447, 1548
BspANI	GGCC	1 cut(s)	1495
BspCNI	CTCAG	7 cut(s)	28, 340, 967, 988, 1136, 1432, 1489
BspFNI	CGCG	2 cut(s)	576, 1548
BspLI	GGNNCC	6 cut(s)	609, 1136, 1238, 1662, 1663, 1729
BspPI	GGATC	2 cut(s)	1050, 1685
BspQI	GCTCTTC	2 cut(s)	1290, 1749
BspT107I	GGYRCC	2 cut(s)	607, 1134
BspTNI	GGTCTC	3 cut(s)	215, 568, 647
BsrBI	CCGCTC	1 cut(s)	1447
BsrDI	GCAATG	1 cut(s)	812
BsrI	ACTGG	1 cut(s)	1375
BssECI	CCNNGG	4 cut(s)	320, 803, 1274, 1336
BssMI	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
BssT1I	CCWWGG	3 cut(s)	803, 1274, 1336
Bst2UI	CCWGG	1 cut(s)	560
Bst4CI	ACNGT	7 cut(s)	11, 188, 543, 556, 913, 1148, 1381
Bst6I	CTCTTC	4 cut(s)	81, 516, 1290, 1749
BstBAI	YACGTR	1 cut(s)	356
BstC8I	GCNNGC	4 cut(s)	56, 327, 993, 1281
BstDEI	CTNAG	7 cut(s)	36, 348, 975, 996, 1123, 1440, 1497
BstDSI	CCRYGG	2 cut(s)	320, 1274
BstF5I	GGATG	9 cut(s)	289, 373, 1107, 1204, 1310, 1341, 1630, 1696, 1775
BstFNI	CGCG	2 cut(s)	576, 1548
BstKTI	GATC	8 cut(s)	124, 264, 1045, 1093, 1188, 1402, 1627, 1693
BstMAI	GTCTC	5 cut(s)	215, 549, 568, 619, 647
BstMBI	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
BstMCI	CGRYCG	2 cut(s)	190, 1546
BstMWI	GCNNNNNNNGC	2 cut(s)	32, 992
BstNI	CCWGG	1 cut(s)	560
BstNSI	RCATGY	2 cut(s)	802, 1566
BstSCI	CCNGG	2 cut(s)	558, 1680
BstSFI	CTRYAG	1 cut(s)	27
BstSLI	GKGCMC	1 cut(s)	1139
BstUI	CGCG	2 cut(s)	576, 1548
BstV1I	GCAGC	1 cut(s)	539
BstX2I	RGATCY	3 cut(s)	1090, 1399, 1690
BstYI	RGATCY	3 cut(s)	1090, 1399, 1690
BsuI	GTATCC	1 cut(s)	384
BsuRI	GGCC	1 cut(s)	1495
BtgI	CCRYGG	2 cut(s)	320, 1274
BtgZI	GCGATG	1 cut(s)	1794
BtsCI	GGATG	9 cut(s)	289, 373, 1107, 1204, 1310, 1341, 1630, 1696, 1775
BtsIMutI	CAGTG	2 cut(s)	445, 1437
Cac8I	GCNNGC	4 cut(s)	56, 327, 993, 1281
CaiI	CAGNNNCTG	1 cut(s)	547
Cfr13I	GGNCC	4 cut(s)	1237, 1333, 1364, 1661
Csp6I	GTAC	1 cut(s)	304
CspCI	CAANNNNNGTGG	2 cut(s)	678, 713
CviAII	CATG	9 cut(s)	180, 672, 799, 947, 1275, 1415, 1520, 1529, 1563
CviQI	GTAC	1 cut(s)	304
DdeI	CTNAG	7 cut(s)	36, 348, 975, 996, 1123, 1440, 1497
DpnI	GATC	8 cut(s)	123, 263, 1044, 1092, 1187, 1401, 1626, 1692
DpnII	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
Eam1104I	CTCTTC	4 cut(s)	81, 516, 1290, 1749
EarI	CTCTTC	4 cut(s)	81, 516, 1290, 1749
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	2 cut(s)	40, 991
Eco130I	CCWWGG	3 cut(s)	803, 1274, 1336
Eco24I	GRGCYC	3 cut(s)	42, 993, 1761
Eco31I	GGTCTC	3 cut(s)	215, 568, 647
Eco47I	GGWCC	4 cut(s)	1237, 1333, 1364, 1661
Eco53kI	GAGCTC	2 cut(s)	40, 991
Eco72I	CACGTG	1 cut(s)	356
EcoICRI	GAGCTC	2 cut(s)	40, 991
EcoO109I	RGGNCCY	1 cut(s)	1661
EcoRII	CCWGG	1 cut(s)	558
EcoT14I	CCWWGG	3 cut(s)	803, 1274, 1336
EcoT22I	ATGCAT	2 cut(s)	677, 1207
EcoT38I	GRGCYC	3 cut(s)	42, 993, 1761
ErhI	CCWWGG	3 cut(s)	803, 1274, 1336
FaeI	CATG	9 cut(s)	183, 675, 802, 950, 1278, 1418, 1523, 1532, 1566
FaqI	GGGAC	4 cut(s)	110, 197, 1250, 1674
FatI	CATG	9 cut(s)	179, 671, 798, 946, 1274, 1414, 1519, 1528, 1562
FbaI	TGATCA	1 cut(s)	121
FblI	GTMKAC	1 cut(s)	659
Fnu4HI	GCNGC	2 cut(s)	33, 528
FokI	GGATG	9 cut(s)	296, 380, 1094, 1211, 1297, 1328, 1617, 1683, 1782
FriOI	GRGCYC	3 cut(s)	42, 993, 1761
Fsp4HI	GCNGC	2 cut(s)	33, 528
FspBI	CTAG	2 cut(s)	51, 1227
GluI	GCNGC	2 cut(s)	33, 528
GsaI	CCCAGC	1 cut(s)	161
GsuI	CTGGAG	2 cut(s)	1040, 1667
HaeIII	GGCC	1 cut(s)	1495
HapII	CCGG	5 cut(s)	21, 89, 1082, 1682, 1748
Hin1II	CATG	9 cut(s)	183, 675, 802, 950, 1278, 1418, 1523, 1532, 1566
HincII	GTYRAC	2 cut(s)	197, 870
HindII	GTYRAC	2 cut(s)	197, 870
HpaII	CCGG	5 cut(s)	21, 89, 1082, 1682, 1748
HphI	GGTGA	8 cut(s)	23, 103, 131, 196, 271, 394, 1307, 1796
Hpy166II	GTNNAC	4 cut(s)	197, 572, 660, 870
Hpy188I	TCNGA	6 cut(s)	343, 349, 549, 595, 619, 1090
Hpy8I	GTNNAC	4 cut(s)	197, 572, 660, 870
HpyAV	CCTTC	7 cut(s)	139, 413, 598, 620, 817, 976, 1760
HpyCH4III	ACNGT	7 cut(s)	11, 188, 543, 556, 913, 1148, 1381
HpyCH4IV	ACGT	2 cut(s)	199, 355
HpyF10VI	GCNNNNNNNGC	2 cut(s)	32, 992
HpyF3I	CTNAG	7 cut(s)	36, 348, 975, 996, 1123, 1440, 1497
HpySE526I	ACGT	2 cut(s)	199, 355
Hsp92II	CATG	9 cut(s)	183, 675, 802, 950, 1278, 1418, 1523, 1532, 1566
KflI	GGGWCCC	1 cut(s)	1661
Ksp22I	TGATCA	1 cut(s)	121
Kzo9I	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
LguI	GCTCTTC	2 cut(s)	1290, 1749
LmnI	GCTCC	5 cut(s)	244, 467, 1418, 1444, 1525
Lsp1109I	GCAGC	1 cut(s)	539
MaeI	CTAG	2 cut(s)	51, 1227
MaeII	ACGT	2 cut(s)	199, 355
MaeIII	GTNAC	4 cut(s)	1229, 1295, 1381, 1616
MalI	GATC	8 cut(s)	123, 263, 1044, 1092, 1187, 1401, 1626, 1692
MbiI	CCGCTC	1 cut(s)	1447
MboI	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	3 cut(s)	1090, 1399, 1690
MhlI	GDGCHC	6 cut(s)	42, 993, 1139, 1542, 1645, 1761
MluCI	AATT	8 cut(s)	330, 506, 585, 680, 936, 1026, 1469, 1555
MlyI	GAGTC	5 cut(s)	67, 299, 1031, 1292, 1327
Mph1103I	ATGCAT	2 cut(s)	677, 1207
MseI	TTAA	4 cut(s)	129, 500, 509, 1804
MslI	CAYNNNNRTG	3 cut(s)	921, 1132, 1346
MspA1I	CMGCKG	2 cut(s)	35, 275
MspI	CCGG	5 cut(s)	21, 89, 1082, 1682, 1748
MspR9I	CCNGG	2 cut(s)	560, 1682
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	2 cut(s)	1275, 1516
MvaI	CCWGG	1 cut(s)	560
MvnI	CGCG	2 cut(s)	576, 1548
MwoI	GCNNNNNNNGC	2 cut(s)	32, 992
NciI	CCSGG	1 cut(s)	1682
NcoI	CCATGG	1 cut(s)	1274
NdeII	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
NlaIII	CATG	9 cut(s)	183, 675, 802, 950, 1278, 1418, 1523, 1532, 1566
NlaIV	GGNNCC	6 cut(s)	609, 1136, 1238, 1662, 1663, 1729
NmuCI	GTSAC	3 cut(s)	1229, 1295, 1381
NsiI	ATGCAT	2 cut(s)	677, 1207
NspI	RCATGY	2 cut(s)	802, 1566
OliI	CACNNNNGTG	1 cut(s)	1132
PciI	ACATGT	1 cut(s)	1562
PciSI	GCTCTTC	2 cut(s)	1290, 1749
PcsI	WCGNNNNNNNCGW	1 cut(s)	196
PctI	GAATGC	2 cut(s)	1275, 1516
PfeI	GAWTC	5 cut(s)	17, 344, 1071, 1078, 1326
PkrI	GCNGC	2 cut(s)	34, 529
PleI	GAGTC	5 cut(s)	67, 298, 1030, 1292, 1326
PmaCI	CACGTG	1 cut(s)	356
PmlI	CACGTG	1 cut(s)	356
PpsI	GAGTC	5 cut(s)	67, 298, 1030, 1292, 1326
Ppu21I	YACGTR	1 cut(s)	356
PpuMI	RGGWCCY	1 cut(s)	1661
PscI	ACATGT	1 cut(s)	1562
Psp124BI	GAGCTC	2 cut(s)	42, 993
Psp1406I	AACGTT	1 cut(s)	199
Psp5II	RGGWCCY	1 cut(s)	1661
Psp6I	CCWGG	1 cut(s)	558
PspCI	CACGTG	1 cut(s)	356
PspFI	CCCAGC	1 cut(s)	157
PspGI	CCWGG	1 cut(s)	558
PspN4I	GGNNCC	6 cut(s)	609, 1136, 1238, 1662, 1663, 1729
PspPI	GGNCC	4 cut(s)	1237, 1333, 1364, 1661
PspPPI	RGGWCCY	1 cut(s)	1661
PstNI	CAGNNNCTG	1 cut(s)	547
PsuI	RGATCY	3 cut(s)	1090, 1399, 1690
PvuII	CAGCTG	1 cut(s)	275
RsaI	GTAC	1 cut(s)	305
RsaNI	GTAC	1 cut(s)	304
RseI	CAYNNNNRTG	3 cut(s)	921, 1132, 1346
SacI	GAGCTC	2 cut(s)	42, 993
SapI	GCTCTTC	2 cut(s)	1290, 1749
SaqAI	TTAA	4 cut(s)	129, 500, 509, 1804
SatI	GCNGC	2 cut(s)	33, 528
Sau3AI	GATC	8 cut(s)	121, 261, 1042, 1090, 1185, 1399, 1624, 1690
Sau96I	GGNCC	4 cut(s)	1237, 1333, 1364, 1661
SchI	GAGTC	5 cut(s)	67, 299, 1031, 1292, 1327
ScrFI	CCNGG	2 cut(s)	560, 1682
SduI	GDGCHC	6 cut(s)	42, 993, 1139, 1542, 1645, 1761
SfcI	CTRYAG	1 cut(s)	27
SinI	GGWCC	4 cut(s)	1237, 1333, 1364, 1661
SmiMI	CAYNNNNRTG	3 cut(s)	921, 1132, 1346
SmlI	CTYRAG	2 cut(s)	1300, 1315
SmoI	CTYRAG	2 cut(s)	1300, 1315
Sse9I	AATT	8 cut(s)	330, 506, 585, 680, 936, 1026, 1469, 1555
SsiI	CCGC	5 cut(s)	5, 33, 395, 1447, 1548
SspMI	CTAG	2 cut(s)	51, 1227
SstI	GAGCTC	2 cut(s)	42, 993
StyD4I	CCNGG	2 cut(s)	558, 1680
StyI	CCWWGG	3 cut(s)	803, 1274, 1336
TaaI	ACNGT	7 cut(s)	11, 188, 543, 556, 913, 1148, 1381
TaiI	ACGT	2 cut(s)	202, 358
TaqI	TCGA	4 cut(s)	63, 190, 255, 1251
TaqII	GACCGA	1 cut(s)	1532
TasI	AATT	8 cut(s)	330, 506, 585, 680, 936, 1026, 1469, 1555
TauI	GCSGC	1 cut(s)	35
TfiI	GAWTC	5 cut(s)	17, 344, 1071, 1078, 1326
Tru1I	TTAA	4 cut(s)	129, 500, 509, 1804
Tru9I	TTAA	4 cut(s)	129, 500, 509, 1804
TscAI	CASTG	2 cut(s)	445, 1444
TseFI	GTSAC	3 cut(s)	1229, 1295, 1381
TseI	GCWGC	1 cut(s)	527
Tsp45I	GTSAC	3 cut(s)	1229, 1295, 1381
TspDTI	ATGAA	3 cut(s)	783, 1210, 1403
TspGWI	ACGGA	1 cut(s)	1083
TspRI	CASTG	2 cut(s)	445, 1444
VpaK11BI	GGWCC	4 cut(s)	1237, 1333, 1364, 1661
XapI	RAATTY	3 cut(s)	680, 1469, 1555
XceI	RCATGY	2 cut(s)	802, 1566
XcmI	CCANNNNNNNNNTGG	1 cut(s)	844
XmiI	GTMKAC	1 cut(s)	659
XspI	CTAG	2 cut(s)	51, 1227
Zsp2I	ATGCAT	2 cut(s)	677, 1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.