Transcription factor ABORTED
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| bHLH-MYC_N | PF14215 | 12 - 161 | 1.7e-18 | bHLH-MYC and R2R3-MYB transcription factors N-terminal |
| HLH | PF00010 | 361 - 424 | 3.1e-09 | Helix-loop-helix DNA-binding domain |
| bHLH-TF_ACT-like_plant | PF22754 | 521 - 595 | 5.8e-12 | Plant bHLH transcription factor, ACT-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 705, 959 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 313, 1496 |
| AciI | CCGC | 1 cut(s) | 1880 |
| AclWI | GGATC | 4 cut(s) | 519, 599, 612, 915 |
| AcuI | CTGAAG | 2 cut(s) | 258, 1684 |
| AfaI | GTAC | 4 cut(s) | 367, 450, 523, 582 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 50, 413 |
| AgsI | TTSAA | 6 cut(s) | 58, 455, 722, 787, 991, 1757 |
| AhlI | ACTAGT | 1 cut(s) | 1750 |
| AjnI | CCWGG | 5 cut(s) | 392, 412, 898, 1624, 1668 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 369, 401 |
| Alw21I | GWGCWC | 3 cut(s) | 768, 1620, 1661 |
| Alw26I | GTCTC | 7 cut(s) | 299, 839, 1184, 1482, 1504, 1717, 1767 |
| AlwI | GGATC | 4 cut(s) | 519, 599, 612, 915 |
| AoxI | GGCC | 1 cut(s) | 1068 |
| ApeKI | GCWGC | 2 cut(s) | 658, 1349 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 89, 121, 382, 414 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1326, 1592, 1607 |
| AspS9I | GGNCC | 3 cut(s) | 390, 828, 1457 |
| AsuC2I | CCSGG | 1 cut(s) | 292 |
| AsuHPI | GGTGA | 1 cut(s) | 1877 |
| AvaII | GGWCC | 3 cut(s) | 390, 828, 1457 |
| BamHI | GGATCC | 1 cut(s) | 604 |
| BanII | GRGCYC | 2 cut(s) | 1560, 1661 |
| BbsI | GAAGAC | 5 cut(s) | 102, 174, 261, 462, 1714 |
| Bbv12I | GWGCWC | 3 cut(s) | 768, 1620, 1661 |
| BbvCI | CCTCAGC | 1 cut(s) | 1026 |
| BbvI | GCAGC | 2 cut(s) | 670, 1336 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 623, 657 |
| BciT130I | CCWGG | 5 cut(s) | 394, 414, 900, 1626, 1670 |
| BciVI | GTATCC | 1 cut(s) | 208 |
| BclI | TGATCA | 7 cut(s) | 802, 883, 1006, 1012, 1309, 1315, 1405 |
| BcnI | CCSGG | 1 cut(s) | 292 |
| BcoDI | GTCTC | 7 cut(s) | 299, 839, 1184, 1482, 1504, 1717, 1767 |
| BcuI | ACTAGT | 1 cut(s) | 1750 |
| BfaI | CTAG | 5 cut(s) | 284, 630, 1695, 1751, 1784 |
| BfmI | CTRYAG | 3 cut(s) | 195, 981, 1492 |
| BfuI | GTATCC | 1 cut(s) | 208 |
| BglII | AGATCT | 1 cut(s) | 242 |
| BisI | GCNGC | 2 cut(s) | 659, 1350 |
| BlsI | GCNGC | 2 cut(s) | 660, 1351 |
| BmcAI | AGTACT | 3 cut(s) | 367, 450, 582 |
| Bme1390I | CCNGG | 6 cut(s) | 292, 394, 414, 900, 1626, 1670 |
| Bme18I | GGWCC | 3 cut(s) | 390, 828, 1457 |
| BmgT120I | GGNCC | 3 cut(s) | 390, 828, 1457 |
| BmiI | GGNNCC | 4 cut(s) | 391, 606, 1557, 1799 |
| BmrFI | CCNGG | 6 cut(s) | 292, 394, 414, 900, 1626, 1670 |
| BmrI | ACTGGG | 2 cut(s) | 321, 804 |
| BmuI | ACTGGG | 2 cut(s) | 321, 804 |
| BpiI | GAAGAC | 5 cut(s) | 102, 174, 261, 462, 1714 |
| BpmI | CTGGAG | 1 cut(s) | 938 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1026 |
| BpuEI | CTTGAG | 1 cut(s) | 135 |
| BpuMI | CCSGG | 1 cut(s) | 292 |
| Bsa29I | ATCGAT | 1 cut(s) | 471 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1011, 1314, 1587 |
| BsaJI | CCNNGG | 3 cut(s) | 32, 393, 1155 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 50, 413 |
| Bse1I | ACTGG | 3 cut(s) | 185, 327, 799 |
| Bse3DI | GCAATG | 1 cut(s) | 825 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1011, 1314, 1587 |
| BseBI | CCWGG | 5 cut(s) | 394, 414, 900, 1626, 1670 |
| BseCI | ATCGAT | 1 cut(s) | 471 |
| BseDI | CCNNGG | 3 cut(s) | 32, 393, 1155 |
| BseGI | GGATG | 8 cut(s) | 68, 123, 229, 693, 931, 1036, 1249, 1876 |
| BseJI | GATNNNNATC | 3 cut(s) | 1011, 1314, 1587 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 50, 413 |
| BseMI | GCAATG | 1 cut(s) | 825 |
| BseMII | CTCAG | 4 cut(s) | 1008, 1017, 1428, 1655 |
| BseNI | ACTGG | 3 cut(s) | 185, 327, 799 |
| BseRI | GAGGAG | 1 cut(s) | 1063 |
| BseXI | GCAGC | 2 cut(s) | 670, 1336 |
| BseYI | CCCAGC | 1 cut(s) | 608 |
| BshFI | GGCC | 1 cut(s) | 1070 |
| BshVI | ATCGAT | 1 cut(s) | 471 |
| BsiHKAI | GWGCWC | 3 cut(s) | 768, 1620, 1661 |
| BsiSI | CCGG | 1 cut(s) | 291 |
| BslFI | GGGAC | 5 cut(s) | 80, 151, 403, 987, 1899 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 50, 413 |
| BsmAI | GTCTC | 7 cut(s) | 299, 839, 1184, 1482, 1504, 1717, 1767 |
| BsmBI | CGTCTC | 1 cut(s) | 1717 |
| BsmFI | GGGAC | 5 cut(s) | 80, 151, 403, 987, 1899 |
| BsnI | GGCC | 1 cut(s) | 1070 |
| Bsp1286I | GDGCHC | 4 cut(s) | 768, 1560, 1620, 1661 |
| BspACI | CCGC | 1 cut(s) | 1880 |
| BspANI | GGCC | 1 cut(s) | 1070 |
| BspCNI | CTCAG | 4 cut(s) | 1007, 1018, 1429, 1656 |
| BspDI | ATCGAT | 1 cut(s) | 471 |
| BspHI | TCATGA | 5 cut(s) | 556, 910, 1009, 1312, 1339 |
| BspLI | GGNNCC | 4 cut(s) | 391, 606, 1557, 1799 |
| BspMAI | CTGCAG | 1 cut(s) | 199 |
| BspPI | GGATC | 4 cut(s) | 519, 599, 612, 915 |
| BsrDI | GCAATG | 1 cut(s) | 825 |
| BsrI | ACTGG | 3 cut(s) | 185, 327, 799 |
| BssECI | CCNNGG | 3 cut(s) | 32, 393, 1155 |
| BssT1I | CCWWGG | 1 cut(s) | 1155 |
| Bst2UI | CCWGG | 5 cut(s) | 394, 414, 900, 1626, 1670 |
| Bst4CI | ACNGT | 6 cut(s) | 350, 385, 1202, 1364, 1388, 1493 |
| BstC8I | GCNNGC | 2 cut(s) | 931, 1068 |
| BstDEI | CTNAG | 7 cut(s) | 38, 89, 994, 1026, 1130, 1437, 1664 |
| BstF5I | GGATG | 8 cut(s) | 68, 123, 229, 693, 931, 1036, 1249, 1876 |
| BstMAI | GTCTC | 7 cut(s) | 299, 839, 1184, 1482, 1504, 1717, 1767 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 763, 815, 1555, 1665, 1704 |
| BstNI | CCWGG | 5 cut(s) | 394, 414, 900, 1626, 1670 |
| BstNSI | RCATGY | 3 cut(s) | 467, 737, 980 |
| BstSCI | CCNGG | 6 cut(s) | 290, 392, 412, 898, 1624, 1668 |
| BstSFI | CTRYAG | 3 cut(s) | 195, 981, 1492 |
| BstV1I | GCAGC | 2 cut(s) | 670, 1336 |
| BstV2I | GAAGAC | 5 cut(s) | 102, 174, 261, 462, 1714 |
| BstX2I | RGATCY | 2 cut(s) | 242, 604 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1583, 1809 |
| BstYI | RGATCY | 2 cut(s) | 242, 604 |
| Bsu15I | ATCGAT | 1 cut(s) | 471 |
| BsuI | GTATCC | 1 cut(s) | 208 |
| BsuRI | GGCC | 1 cut(s) | 1070 |
| BsuTUI | ATCGAT | 1 cut(s) | 471 |
| BtsCI | GGATG | 8 cut(s) | 68, 123, 229, 693, 931, 1036, 1249, 1876 |
| BtsI | GCAGTG | 1 cut(s) | 1009 |
| BtsIMutI | CAGTG | 1 cut(s) | 1009 |
| Cac8I | GCNNGC | 2 cut(s) | 931, 1068 |
| CciI | TCATGA | 5 cut(s) | 556, 910, 1009, 1312, 1339 |
| Cfr13I | GGNCC | 3 cut(s) | 390, 828, 1457 |
| ClaI | ATCGAT | 1 cut(s) | 471 |
| Csp6I | GTAC | 4 cut(s) | 366, 449, 522, 581 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1609, 1644 |
| CviQI | GTAC | 4 cut(s) | 366, 449, 522, 581 |
| DdeI | CTNAG | 7 cut(s) | 38, 89, 994, 1026, 1130, 1437, 1664 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 313, 1496 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 313, 1496 |
| Ecl136II | GAGCTC | 1 cut(s) | 1659 |
| Eco130I | CCWWGG | 1 cut(s) | 1155 |
| Eco24I | GRGCYC | 2 cut(s) | 1560, 1661 |
| Eco47I | GGWCC | 3 cut(s) | 390, 828, 1457 |
| Eco53kI | GAGCTC | 1 cut(s) | 1659 |
| Eco57I | CTGAAG | 2 cut(s) | 258, 1684 |
| EcoICRI | GAGCTC | 1 cut(s) | 1659 |
| EcoRII | CCWGG | 5 cut(s) | 392, 412, 898, 1624, 1668 |
| EcoT14I | CCWWGG | 1 cut(s) | 1155 |
| EcoT22I | ATGCAT | 1 cut(s) | 870 |
| EcoT38I | GRGCYC | 2 cut(s) | 1560, 1661 |
| ErhI | CCWWGG | 1 cut(s) | 1155 |
| Esp3I | CGTCTC | 1 cut(s) | 1717 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 159, 191, 1284, 1316 |
| FaqI | GGGAC | 5 cut(s) | 80, 151, 403, 987, 1899 |
| FauNDI | CATATG | 2 cut(s) | 864, 870 |
| FbaI | TGATCA | 7 cut(s) | 802, 883, 1006, 1012, 1309, 1315, 1405 |
| Fnu4HI | GCNGC | 2 cut(s) | 659, 1350 |
| FokI | GGATG | 8 cut(s) | 75, 130, 216, 700, 938, 1043, 1256, 1863 |
| FriOI | GRGCYC | 2 cut(s) | 1560, 1661 |
| Fsp4HI | GCNGC | 2 cut(s) | 659, 1350 |
| FspBI | CTAG | 5 cut(s) | 284, 630, 1695, 1751, 1784 |
| GluI | GCNGC | 2 cut(s) | 659, 1350 |
| GsaI | CCCAGC | 1 cut(s) | 612 |
| GsuI | CTGGAG | 1 cut(s) | 938 |
| HaeIII | GGCC | 1 cut(s) | 1070 |
| HapII | CCGG | 1 cut(s) | 291 |
| HincII | GTYRAC | 1 cut(s) | 1426 |
| HindII | GTYRAC | 1 cut(s) | 1426 |
| HindIII | AAGCTT | 2 cut(s) | 526, 1106 |
| HinfI | GANTC | 8 cut(s) | 287, 553, 725, 947, 1411, 1517, 1588, 1775 |
| HpaII | CCGG | 1 cut(s) | 291 |
| HphI | GGTGA | 1 cut(s) | 1877 |
| Hpy166II | GTNNAC | 4 cut(s) | 538, 1391, 1426, 1748 |
| Hpy188III | TCNNGA | 9 cut(s) | 82, 152, 557, 911, 1010, 1313, 1319, 1340, 1485 |
| Hpy8I | GTNNAC | 4 cut(s) | 538, 1391, 1426, 1748 |
| HpyAV | CCTTC | 5 cut(s) | 212, 1092, 1337, 1732, 1927 |
| HpyCH4III | ACNGT | 6 cut(s) | 350, 385, 1202, 1364, 1388, 1493 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 763, 815, 1555, 1665, 1704 |
| HpyF3I | CTNAG | 7 cut(s) | 38, 89, 994, 1026, 1130, 1437, 1664 |
| Ksp22I | TGATCA | 7 cut(s) | 802, 883, 1006, 1012, 1309, 1315, 1405 |
| LmnI | GCTCC | 3 cut(s) | 763, 919, 1555 |
| Lsp1109I | GCAGC | 2 cut(s) | 670, 1336 |
| MaeI | CTAG | 5 cut(s) | 284, 630, 1695, 1751, 1784 |
| MaeIII | GTNAC | 5 cut(s) | 222, 668, 1202, 1675, 1690 |
| MflI | RGATCY | 2 cut(s) | 242, 604 |
| MhlI | GDGCHC | 4 cut(s) | 768, 1560, 1620, 1661 |
| MluCI | AATT | 5 cut(s) | 144, 423, 637, 712, 778 |
| MlyI | GAGTC | 4 cut(s) | 547, 941, 1420, 1769 |
| MmeI | TCCRAC | 3 cut(s) | 139, 1200, 1402 |
| Mph1103I | ATGCAT | 1 cut(s) | 870 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1326, 1592, 1607 |
| MseI | TTAA | 7 cut(s) | 311, 335, 774, 1110, 1302, 1431, 1805 |
| MslI | CAYNNNNRTG | 4 cut(s) | 836, 1338, 1344, 1807 |
| MspI | CCGG | 1 cut(s) | 291 |
| MspR9I | CCNGG | 6 cut(s) | 292, 394, 414, 900, 1626, 1670 |
| MvaI | CCWGG | 5 cut(s) | 394, 414, 900, 1626, 1670 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 763, 815, 1555, 1665, 1704 |
| NciI | CCSGG | 1 cut(s) | 292 |
| NdeI | CATATG | 2 cut(s) | 864, 870 |
| NlaIV | GGNNCC | 4 cut(s) | 391, 606, 1557, 1799 |
| NmuCI | GTSAC | 1 cut(s) | 668 |
| NsiI | ATGCAT | 1 cut(s) | 870 |
| NspI | RCATGY | 3 cut(s) | 467, 737, 980 |
| PagI | TCATGA | 5 cut(s) | 556, 910, 1009, 1312, 1339 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1326, 1592, 1607 |
| PfeI | GAWTC | 4 cut(s) | 287, 725, 1517, 1588 |
| PfoI | TCCNGGA | 1 cut(s) | 290 |
| PkrI | GCNGC | 2 cut(s) | 660, 1351 |
| PleI | GAGTC | 4 cut(s) | 547, 941, 1419, 1769 |
| PpsI | GAGTC | 4 cut(s) | 547, 941, 1419, 1769 |
| PsiI | TTATAA | 2 cut(s) | 705, 959 |
| Psp124BI | GAGCTC | 1 cut(s) | 1661 |
| Psp6I | CCWGG | 5 cut(s) | 392, 412, 898, 1624, 1668 |
| PspFI | CCCAGC | 1 cut(s) | 608 |
| PspGI | CCWGG | 5 cut(s) | 392, 412, 898, 1624, 1668 |
| PspN4I | GGNNCC | 4 cut(s) | 391, 606, 1557, 1799 |
| PspPI | GGNCC | 3 cut(s) | 390, 828, 1457 |
| PstI | CTGCAG | 1 cut(s) | 199 |
| PsuI | RGATCY | 2 cut(s) | 242, 604 |
| RsaI | GTAC | 4 cut(s) | 367, 450, 523, 582 |
| RsaNI | GTAC | 4 cut(s) | 366, 449, 522, 581 |
| RseI | CAYNNNNRTG | 4 cut(s) | 836, 1338, 1344, 1807 |
| SacI | GAGCTC | 1 cut(s) | 1661 |
| SaqAI | TTAA | 7 cut(s) | 311, 335, 774, 1110, 1302, 1431, 1805 |
| SatI | GCNGC | 2 cut(s) | 659, 1350 |
| Sau96I | GGNCC | 3 cut(s) | 390, 828, 1457 |
| ScaI | AGTACT | 3 cut(s) | 367, 450, 582 |
| SchI | GAGTC | 4 cut(s) | 547, 941, 1420, 1769 |
| ScrFI | CCNGG | 6 cut(s) | 292, 394, 414, 900, 1626, 1670 |
| SduI | GDGCHC | 4 cut(s) | 768, 1560, 1620, 1661 |
| SfcI | CTRYAG | 3 cut(s) | 195, 981, 1492 |
| SinI | GGWCC | 3 cut(s) | 390, 828, 1457 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 836, 1338, 1344, 1807 |
| SmlI | CTYRAG | 1 cut(s) | 150 |
| SmoI | CTYRAG | 1 cut(s) | 150 |
| SpeI | ACTAGT | 1 cut(s) | 1750 |
| Sse9I | AATT | 5 cut(s) | 144, 423, 637, 712, 778 |
| SsiI | CCGC | 1 cut(s) | 1880 |
| SspI | AATATT | 2 cut(s) | 955, 1150 |
| SspMI | CTAG | 5 cut(s) | 284, 630, 1695, 1751, 1784 |
| SstI | GAGCTC | 1 cut(s) | 1661 |
| StyD4I | CCNGG | 6 cut(s) | 290, 392, 412, 898, 1624, 1668 |
| StyI | CCWWGG | 1 cut(s) | 1155 |
| TaaI | ACNGT | 6 cut(s) | 350, 385, 1202, 1364, 1388, 1493 |
| TaqI | TCGA | 2 cut(s) | 362, 471 |
| TasI | AATT | 5 cut(s) | 144, 423, 637, 712, 778 |
| TatI | WGTACW | 3 cut(s) | 365, 448, 580 |
| TfiI | GAWTC | 4 cut(s) | 287, 725, 1517, 1588 |
| Tru1I | TTAA | 7 cut(s) | 311, 335, 774, 1110, 1302, 1431, 1805 |
| Tru9I | TTAA | 7 cut(s) | 311, 335, 774, 1110, 1302, 1431, 1805 |
| TscAI | CASTG | 1 cut(s) | 1009 |
| TseFI | GTSAC | 1 cut(s) | 668 |
| TseI | GCWGC | 2 cut(s) | 658, 1349 |
| Tsp45I | GTSAC | 1 cut(s) | 668 |
| TspGWI | ACGGA | 1 cut(s) | 1071 |
| TspRI | CASTG | 1 cut(s) | 1009 |
| VpaK11BI | GGWCC | 3 cut(s) | 390, 828, 1457 |
| XceI | RCATGY | 3 cut(s) | 467, 737, 980 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1326, 1592, 1607 |
| XspI | CTAG | 5 cut(s) | 284, 630, 1695, 1751, 1784 |
| ZrmI | AGTACT | 3 cut(s) | 367, 450, 582 |
| Zsp2I | ATGCAT | 1 cut(s) | 870 |