Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Reverse (-)

29693089 .. 29698171

Gene Structure 5083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00189880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGTGAGGCCCAACCGAGACATGCATCCCATAGCCCTATGTTCAAGCTATGCTACGGAGTGGGGTGAAGGCCATGAGATTTTTGGGTTGAAAGGTGTAATGAACATGACTATGTATAATCTGATAATTGAGAGGCTTAGACCCCTAGTGGGTTTGAAAGGCTGGGATTATTGTGTTCTCTGGAAGTTAAGTGAAGACCAAAGGTTCATCGAGTGGATTGGTTGCTGCTGTTCTGGGATTGATGAGGACACCCAGAATGGTGGACAAGAACTTCTGTTTCCAGTTTATCAAGTCTTTCAGTGCAGGGATACAATGCAGCACTCAAGAACTAATTCTTGTGATATCCTTTCTCATCTTCCTTCTTCAATGTCCTTAGACTCTGGGTACATATTTAATGCAGAAAGAGATGGGACCCTAGTTTTGGTTCCAACTGCAGGAGGGTTAATGATTGAGCTGTTCGTCTCCAAAGATGTCTCTGAGGACCAGCATGTCATTGATTTCATCACAGCACAATGCAACATTTGGCGCGAGCAAGACACCCTGATCAGTGCAAGCAACACATGTAGTACAAACACCCCTGTACTTTCCCCATCAATGGCATCATTAGATCGTCATGATGCGAATTTGCCATACGATATCACAGTTGATCGAATCCGCCTATGCTCTTCTGAGTCCTCTTCTCCATTGAACTTCCTGCAACATGTCACTAGTTACAACTCTGAAAACAGAATGAGGAACAGTACTAGTGAATGTAATTATGACCAGGGTAATTCACATGAGTACCCATTGGATCAGCCATTAGAAAACATGAAGCAACAAGGTACTCTGGATGATCAGGATTCGATAAAACCAGCAGACCATTCAGTTTCAGATTGCAGTGATCAAACTGATGACACAAATTATAAAACAAGAAATGGAAAAGAGCCTCAATCCAAAAACCTTGTTGCTGAGAGGAAGAGAAGGAAGAAGCTTAACGAAAAACTCTATAAACTTCGCTCTTTGGTTCCCAACATTTCTAAGATGGACAAGGCTTCGATTCTCAAGGATGCGATTGATTTTGTCAAGGACTTGCAGAGACAAGTGAAAGAACTCCAAGATGTGCTTGAACATAATTCAAATGAAGAAGGAGGAGCTAAGAGAACTTTTAATAGTATCTCTGGAAATCACAACAATTACCAGTCAGAGGGTCTGAATCAACATGGAATTTCCATGGCAAATAAACCAAAAAGTGACGACCCTCAAAACGGCTTTCGTGACTCGGATCATAATACTAATGAGAAGGGACAACAGCAGATGGAGCCCCAAGTGGGAGTAACTCAGTTAGACGGCAACGAGTTCTTTGTGACAGTGTTCTGTGAGCAGAAGCCAGAAGGGTTTGTGAGACTGATGGAGGCATTGGATAGTTTAGGCTTGGAAGTGACTAATGCAAACGTTACTAGCTTCAGAAGCCTTGTCTCTAATGTGTTTAAAGTAGAGAAAAGGGACAGTGAAATACTGCAAGCTGATGAAGTGAGGGACTCTTTGCTGGAGATAACGCGGAATCCATCGAAAGGGTACTGGCCTGAGATGGCGAAAACATCTGGGAATGATGGTGCTTTGGACTATGATCATGATAAGCATCACTACCACCATCACCTCCACAACTACCATAGACCTCCATATCATGTTCGACATCTTTATAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

561

Amino Acids

63.94

Weight (kDa)

5.39

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	44 - 85	1.5e-06	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	315 - 358	4.6e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	435 - 511	6.3e-12	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	903, 1680
AasI	GACNNNNNNGTC	1 cut(s)	488
AccII	CGCG	2 cut(s)	528, 1537
AciI	CCGC	2 cut(s)	655, 1537
AclI	AACGTT	1 cut(s)	1431
AclWI	GGATC	2 cut(s)	798, 1269
AcsI	RAATTY	2 cut(s)	622, 1203
AcuI	CTGAAG	1 cut(s)	1426
AfaI	GTAC	7 cut(s)	386, 568, 582, 742, 782, 823, 1556
AfiI	CCNNNNNNNGG	8 cut(s)	149, 421, 434, 595, 1183, 1244, 1307, 1550
AflIII	ACRYGT	2 cut(s)	560, 700
AgsI	TTSAA	7 cut(s)	45, 91, 157, 366, 688, 1106, 1116
AhlI	ACTAGT	2 cut(s)	707, 743
AjnI	CCWGG	1 cut(s)	762
AluBI	AGCT	6 cut(s)	48, 454, 970, 1133, 1440, 1502
AluI	AGCT	6 cut(s)	48, 454, 970, 1133, 1440, 1502
Alw26I	GTCTC	6 cut(s)	12, 466, 478, 1069, 1375, 1459
AlwI	GGATC	2 cut(s)	798, 1269
AoxI	GGCC	3 cut(s)	8, 70, 1559
ApeKI	GCWGC	2 cut(s)	225, 316
ApoI	RAATTY	2 cut(s)	622, 1203
ArsI	GACNNNNNNTTYG	2 cut(s)	403, 435
Asp700I	GAANNNNTTC	1 cut(s)	331
AspLEI	GCGC	1 cut(s)	528
AspS9I	GGNCC	3 cut(s)	9, 411, 481
AsuHPI	GGTGA	3 cut(s)	16, 77, 1625
AvaII	GGWCC	2 cut(s)	411, 481
BaeI	ACNNNNGTAYC	2 cut(s)	764, 797
BanII	GRGCYC	1 cut(s)	1302
BbsI	GAAGAC	1 cut(s)	201
BbvI	GCAGC	2 cut(s)	212, 328
BccI	CCATC	9 cut(s)	401, 598, 1015, 1288, 1381, 1552, 1561, 1583, 1638
BceAI	ACGGC	2 cut(s)	1261, 1342
BciT130I	CCWGG	1 cut(s)	764
BciVI	GTATCC	1 cut(s)	301
BclI	TGATCA	4 cut(s)	543, 832, 880, 1606
BcoDI	GTCTC	6 cut(s)	12, 466, 478, 1069, 1375, 1459
BcuI	ACTAGT	2 cut(s)	707, 743
BfaI	CTAG	5 cut(s)	146, 416, 708, 744, 1437
BfmI	CTRYAG	1 cut(s)	432
BfuI	GTATCC	1 cut(s)	301
BisI	GCNGC	2 cut(s)	226, 317
BlsI	GCNGC	2 cut(s)	227, 318
BmcAI	AGTACT	1 cut(s)	742
Bme1390I	CCNGG	1 cut(s)	764
Bme18I	GGWCC	2 cut(s)	411, 481
BmgT120I	GGNCC	3 cut(s)	9, 411, 481
BmiI	GGNNCC	5 cut(s)	412, 413, 426, 1005, 1299
BmrFI	CCNGG	1 cut(s)	764
BmsI	GCATC	5 cut(s)	34, 607, 608, 1036, 1627
BpiI	GAAGAC	1 cut(s)	201
BpmI	CTGGAG	1 cut(s)	1547
BpuEI	CTTGAG	2 cut(s)	307, 1025
BsaBI	GATNNNNATC	1 cut(s)	1617
BsaJI	CCNNGG	2 cut(s)	763, 1209
Bsc4I	CCNNNNNNNGG	8 cut(s)	149, 421, 434, 595, 1183, 1244, 1307, 1550
Bse1I	ACTGG	3 cut(s)	281, 1177, 1562
Bse8I	GATNNNNATC	1 cut(s)	1617
BseBI	CCWGG	1 cut(s)	764
BseDI	CCNNGG	2 cut(s)	763, 1209
BseGI	GGATG	3 cut(s)	25, 835, 1051
BseJI	GATNNNNATC	1 cut(s)	1617
BseLI	CCNNNNNNNGG	8 cut(s)	149, 421, 434, 595, 1183, 1244, 1307, 1550
BseMII	CTCAG	5 cut(s)	468, 660, 939, 1331, 1554
BseNI	ACTGG	3 cut(s)	281, 1177, 1562
BseRI	GAGGAG	1 cut(s)	1143
BseXI	GCAGC	2 cut(s)	212, 328
BseYI	CCCAGC	1 cut(s)	162
BsgI	GTGCAG	1 cut(s)	322
Bsh1236I	CGCG	2 cut(s)	528, 1537
BshFI	GGCC	3 cut(s)	10, 72, 1561
BslFI	GGGAC	4 cut(s)	424, 1296, 1496, 1529
BslI	CCNNNNNNNGG	8 cut(s)	149, 421, 434, 595, 1183, 1244, 1307, 1550
BsmAI	GTCTC	6 cut(s)	12, 466, 478, 1069, 1375, 1459
BsmBI	CGTCTC	1 cut(s)	466
BsmFI	GGGAC	4 cut(s)	424, 1296, 1496, 1529
BsnI	GGCC	3 cut(s)	10, 72, 1561
Bsp1286I	GDGCHC	1 cut(s)	1302
Bsp143I	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
Bsp19I	CCATGG	1 cut(s)	1209
BspACI	CCGC	2 cut(s)	655, 1537
BspANI	GGCC	3 cut(s)	10, 72, 1561
BspCNI	CTCAG	5 cut(s)	469, 661, 940, 1330, 1555
BspFNI	CGCG	2 cut(s)	528, 1537
BspHI	TCATGA	2 cut(s)	613, 1609
BspLI	GGNNCC	5 cut(s)	412, 413, 426, 1005, 1299
BspMAI	CTGCAG	1 cut(s)	436
BspPI	GGATC	2 cut(s)	798, 1269
BspQI	GCTCTTC	1 cut(s)	670
BsrI	ACTGG	3 cut(s)	281, 1177, 1562
BssECI	CCNNGG	2 cut(s)	763, 1209
BssMI	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
BssT1I	CCWWGG	1 cut(s)	1209
Bst2UI	CCWGG	1 cut(s)	764
Bst4CI	ACNGT	4 cut(s)	643, 740, 1348, 1487
Bst6I	CTCTTC	3 cut(s)	670, 682, 950
BstC8I	GCNNGC	3 cut(s)	530, 553, 1500
BstDEI	CTNAG	9 cut(s)	137, 373, 477, 669, 948, 1017, 1134, 1317, 1563
BstDSI	CCRYGG	1 cut(s)	1209
BstF5I	GGATG	3 cut(s)	25, 835, 1051
BstFNI	CGCG	2 cut(s)	528, 1537
BstHHI	GCGC	1 cut(s)	528
BstKTI	GATC	8 cut(s)	546, 610, 649, 793, 835, 883, 1264, 1609
BstMAI	GTCTC	6 cut(s)	12, 466, 478, 1069, 1375, 1459
BstMBI	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
BstMWI	GCNNNNNNNGC	2 cut(s)	1297, 1446
BstNI	CCWGG	1 cut(s)	764
BstNSI	RCATGY	4 cut(s)	25, 491, 564, 704
BstSCI	CCNGG	1 cut(s)	762
BstSFI	CTRYAG	1 cut(s)	432
BstUI	CGCG	2 cut(s)	528, 1537
BstV1I	GCAGC	2 cut(s)	212, 328
BstV2I	GAAGAC	1 cut(s)	201
BstXI	CCANNNNNNTGG	1 cut(s)	260
BsuI	GTATCC	1 cut(s)	301
BsuRI	GGCC	3 cut(s)	10, 72, 1561
BtgI	CCRYGG	1 cut(s)	1209
BtsCI	GGATG	3 cut(s)	25, 835, 1051
BtsI	GCAGTG	1 cut(s)	883
BtsIMutI	CAGTG	5 cut(s)	305, 553, 883, 1353, 1492
Cac8I	GCNNGC	3 cut(s)	530, 553, 1500
CciI	TCATGA	2 cut(s)	613, 1609
CfoI	GCGC	1 cut(s)	528
Cfr13I	GGNCC	3 cut(s)	9, 411, 481
Csp6I	GTAC	7 cut(s)	385, 567, 581, 741, 781, 822, 1555
CviQI	GTAC	7 cut(s)	385, 567, 581, 741, 781, 822, 1555
DdeI	CTNAG	9 cut(s)	137, 373, 477, 669, 948, 1017, 1134, 1317, 1563
DpnI	GATC	8 cut(s)	545, 609, 648, 792, 834, 882, 1263, 1608
DpnII	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
DraI	TTTAAA	1 cut(s)	1468
DrdI	GACNNNNNNGTC	1 cut(s)	488
DseDI	GACNNNNNNGTC	1 cut(s)	488
Eam1104I	CTCTTC	3 cut(s)	670, 682, 950
EarI	CTCTTC	3 cut(s)	670, 682, 950
EciI	GGCGGA	1 cut(s)	644
Eco130I	CCWWGG	1 cut(s)	1209
Eco24I	GRGCYC	1 cut(s)	1302
Eco32I	GATATC	2 cut(s)	343, 637
Eco47I	GGWCC	2 cut(s)	411, 481
Eco57I	CTGAAG	1 cut(s)	1426
EcoO109I	RGGNCCY	1 cut(s)	411
EcoRII	CCWGG	1 cut(s)	762
EcoRV	GATATC	2 cut(s)	343, 637
EcoT14I	CCWWGG	1 cut(s)	1209
EcoT22I	ATGCAT	1 cut(s)	27
EcoT38I	GRGCYC	1 cut(s)	1302
ErhI	CCWWGG	1 cut(s)	1209
Esp3I	CGTCTC	1 cut(s)	466
FalI	AAGNNNNNCTT	2 cut(s)	1086, 1118
FaqI	GGGAC	4 cut(s)	424, 1296, 1496, 1529
FbaI	TGATCA	4 cut(s)	543, 832, 880, 1606
Fnu4HI	GCNGC	2 cut(s)	226, 317
FokI	GGATG	3 cut(s)	12, 842, 1058
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	2 cut(s)	226, 317
FspBI	CTAG	5 cut(s)	146, 416, 708, 744, 1437
GlaI	GCGC	1 cut(s)	527
GluI	GCNGC	2 cut(s)	226, 317
GsaI	CCCAGC	1 cut(s)	166
GsuI	CTGGAG	1 cut(s)	1547
HaeIII	GGCC	3 cut(s)	10, 72, 1561
HhaI	GCGC	1 cut(s)	528
Hin6I	GCGC	1 cut(s)	526
HinP1I	GCGC	1 cut(s)	526
HindIII	AAGCTT	1 cut(s)	968
HinfI	GANTC	9 cut(s)	377, 651, 671, 839, 1036, 1192, 1256, 1517, 1540
HphI	GGTGA	3 cut(s)	16, 77, 1625
Hpy166II	GTNNAC	1 cut(s)	263
Hpy188I	TCNGA	9 cut(s)	123, 478, 670, 721, 871, 1183, 1191, 1261, 1445
Hpy188III	TCNNGA	8 cut(s)	181, 324, 614, 827, 836, 1158, 1253, 1610
Hpy8I	GTNNAC	1 cut(s)	263
HpyAV	CCTTC	6 cut(s)	62, 369, 954, 1118, 1273, 1364
HpyCH4III	ACNGT	4 cut(s)	643, 740, 1348, 1487
HpyCH4IV	ACGT	1 cut(s)	1431
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1297, 1446
HpyF3I	CTNAG	9 cut(s)	137, 373, 477, 669, 948, 1017, 1134, 1317, 1563
HpySE526I	ACGT	1 cut(s)	1431
HspAI	GCGC	1 cut(s)	526
KflI	GGGWCCC	1 cut(s)	411
Ksp22I	TGATCA	4 cut(s)	543, 832, 880, 1606
Kzo9I	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
LguI	GCTCTTC	1 cut(s)	670
LmnI	GCTCC	2 cut(s)	1130, 1297
Lsp1109I	GCAGC	2 cut(s)	212, 328
LweI	GCATC	5 cut(s)	34, 607, 608, 1036, 1627
MaeI	CTAG	5 cut(s)	146, 416, 708, 744, 1437
MaeII	ACGT	1 cut(s)	1431
MaeIII	GTNAC	8 cut(s)	703, 710, 1229, 1253, 1312, 1342, 1417, 1432
MalI	GATC	8 cut(s)	545, 609, 648, 792, 834, 882, 1263, 1608
MboI	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
MboII	GAAGA	8 cut(s)	206, 347, 354, 657, 669, 967, 976, 1133
MhlI	GDGCHC	1 cut(s)	1302
MlyI	GAGTC	4 cut(s)	371, 680, 1250, 1511
MmeI	TCCRAC	1 cut(s)	452
Mph1103I	ATGCAT	1 cut(s)	27
MroXI	GAANNNNTTC	1 cut(s)	331
MseI	TTAA	6 cut(s)	188, 393, 443, 972, 1146, 1467
MslI	CAYNNNNRTG	1 cut(s)	110
MspR9I	CCNGG	1 cut(s)	764
MvaI	CCWGG	1 cut(s)	764
MvnI	CGCG	2 cut(s)	528, 1537
MwoI	GCNNNNNNNGC	2 cut(s)	1297, 1446
NcoI	CCATGG	1 cut(s)	1209
NdeII	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
NlaIV	GGNNCC	5 cut(s)	412, 413, 426, 1005, 1299
NmuCI	GTSAC	5 cut(s)	703, 1229, 1253, 1342, 1417
NsiI	ATGCAT	1 cut(s)	27
NspI	RCATGY	4 cut(s)	25, 491, 564, 704
PagI	TCATGA	2 cut(s)	613, 1609
PciI	ACATGT	2 cut(s)	560, 700
PciSI	GCTCTTC	1 cut(s)	670
PdmI	GAANNNNTTC	1 cut(s)	331
PfeI	GAWTC	5 cut(s)	651, 839, 1036, 1192, 1540
PkrI	GCNGC	2 cut(s)	227, 318
PleI	GAGTC	4 cut(s)	371, 679, 1250, 1511
PpsI	GAGTC	4 cut(s)	371, 679, 1250, 1511
PpuMI	RGGWCCY	1 cut(s)	411
PscI	ACATGT	2 cut(s)	560, 700
PsiI	TTATAA	2 cut(s)	903, 1680
Psp1406I	AACGTT	1 cut(s)	1431
Psp5II	RGGWCCY	1 cut(s)	411
Psp6I	CCWGG	1 cut(s)	762
PspFI	CCCAGC	1 cut(s)	162
PspGI	CCWGG	1 cut(s)	762
PspN4I	GGNNCC	5 cut(s)	412, 413, 426, 1005, 1299
PspPI	GGNCC	3 cut(s)	9, 411, 481
PspPPI	RGGWCCY	1 cut(s)	411
PstI	CTGCAG	1 cut(s)	436
RsaI	GTAC	7 cut(s)	386, 568, 582, 742, 782, 823, 1556
RsaNI	GTAC	7 cut(s)	385, 567, 581, 741, 781, 822, 1555
RseI	CAYNNNNRTG	1 cut(s)	110
SapI	GCTCTTC	1 cut(s)	670
SaqAI	TTAA	6 cut(s)	188, 393, 443, 972, 1146, 1467
SatI	GCNGC	2 cut(s)	226, 317
Sau3AI	GATC	8 cut(s)	543, 607, 646, 790, 832, 880, 1261, 1606
Sau96I	GGNCC	3 cut(s)	9, 411, 481
ScaI	AGTACT	1 cut(s)	742
SchI	GAGTC	4 cut(s)	371, 680, 1250, 1511
ScrFI	CCNGG	1 cut(s)	764
SduI	GDGCHC	1 cut(s)	1302
SfaNI	GCATC	5 cut(s)	34, 607, 608, 1036, 1627
SfcI	CTRYAG	1 cut(s)	432
SinI	GGWCC	2 cut(s)	411, 481
SmiMI	CAYNNNNRTG	1 cut(s)	110
SmlI	CTYRAG	2 cut(s)	322, 1040
SmoI	CTYRAG	2 cut(s)	322, 1040
SpeI	ACTAGT	2 cut(s)	707, 743
SsiI	CCGC	2 cut(s)	655, 1537
SspMI	CTAG	5 cut(s)	146, 416, 708, 744, 1437
StyD4I	CCNGG	1 cut(s)	762
StyI	CCWWGG	1 cut(s)	1209
TaaI	ACNGT	4 cut(s)	643, 740, 1348, 1487
TaiI	ACGT	1 cut(s)	1434
TaqI	TCGA	6 cut(s)	210, 649, 842, 1034, 1547, 1669
TatI	WGTACW	3 cut(s)	566, 580, 740
TfiI	GAWTC	5 cut(s)	651, 839, 1036, 1192, 1540
Tru1I	TTAA	6 cut(s)	188, 393, 443, 972, 1146, 1467
Tru9I	TTAA	6 cut(s)	188, 393, 443, 972, 1146, 1467
TscAI	CASTG	5 cut(s)	305, 553, 883, 1353, 1492
TseFI	GTSAC	5 cut(s)	703, 1229, 1253, 1342, 1417
TseI	GCWGC	2 cut(s)	225, 316
Tsp45I	GTSAC	5 cut(s)	703, 1229, 1253, 1342, 1417
TspDTI	ATGAA	6 cut(s)	116, 196, 490, 824, 1134, 1521
TspGWI	ACGGA	1 cut(s)	71
TspRI	CASTG	5 cut(s)	305, 553, 883, 1353, 1492
VpaK11BI	GGWCC	2 cut(s)	411, 481
XapI	RAATTY	2 cut(s)	622, 1203
XceI	RCATGY	4 cut(s)	25, 491, 564, 704
XcmI	CCANNNNNNNNNTGG	1 cut(s)	80
XmnI	GAANNNNTTC	1 cut(s)	331
XspI	CTAG	5 cut(s)	146, 416, 708, 744, 1437
ZrmI	AGTACT	1 cut(s)	742
Zsp2I	ATGCAT	1 cut(s)	27

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.