Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Forward (+)

41562004 .. 41565059

Gene Structure 3056 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24977

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGAACATGACTATGTATAATCTGATAATTGAGAGGCTTAGACCCCTTGTGGGTTTGAAAGGCTGGGATTATTGTGTTCTCTGGAAGTTAAGTGAAGACCAAAGGTTCATTGAGTGGATTGGTTGCTGCTGTTCTGGGATTGATGAGGACACCCAGAATGGTGGACAAGAACTTCTGTTTCCAGTTTATCAAGTCTTTCAGTGCAGGGATACAATGCAGCACTCAAGAACTAATTCTTGTGATATCCTTTCTCATCTTCCTTCTTCAATGCCCTTAGACTCTGGGATTTATGCAAAAACCATGATGTCAAACCAGCCCTGTTGGTTGAACTGCTCCTCTGGTAACAGAGATTCAAGTGCTATGCTAGAAAGAGATGGGACCCTACTTTTGGTTCCAACTGCAGGAGGATTAATGATTGAGCTGTTCGTCTCCAAAGATGTCTCTGAGAACCAGCAAGTCATTGATTTCATCACAGCACAATGCAACATTTGGCGCGAGCAAGACACCCTGATCAGTGCAAGCAACACATGTAGTACAAACACCCCTGTACTTTCCCCATCAATGGCATCATTGGATCCTCATGATGCGAATTTGCCATACGATATCACAGTTGATCGAATCCGCCTATGCTCTTCTGAGTCCCCTTCTCCATTGAACTTCCTGCAACATGTCACTAGTTACAACTCTGACAACAGAATGAAGAACAGTACTAGTGAATGTAATTATGACCAGGGTAATTCACATGAGCACTCTTTGGATCAGCCATTAGAAAACATGGAGCAACAAGGTACTCTGGATTATCAGGATTCGATAAAACCAGCAGACCATTCAGTTTCAGATTGCAGTGACCAAACTGATGACACAAATTATAAAACAAGAAATGGAAAAGAGCCTCAATCCAAAAACCTTGTTGCTGAGAGGAAGAGAAGAAAGAAGCTTAACGAAAAACTCTATAAACTTCGCTCTTTGGTTCCCAACATTTCTAAGATGGACAAGGCTTCGATTCTCAAGGATGCGATTGATTTTGTCAAGGACTTGCAGAGACAAGTGAAAGAACTCCAAGATGTGCTTGAACATAATTCAAATGAAGATGGAGGAGCTAAGAGAACTTTTAATAGTATCTCTGGAAATCACAACAATTACCAGTCAGAGGGTCTGAATCAACATGGAATTTCCATGGCAAATAAACCAAAAAGTGACAACCCTCAAAACGGCTTTCGTGACTCGGATCATAATACTAATGAGAAGGGACAACAGCAGATGGAGCCACAAGTGGGAGTAACTCAGTTAGACGGCAACGAGTTCTTTGTGACAGTGTTCTGTGAGCAGAAGCCAGAAGGATTTGTGAGACTGATGGAGGCATTGGATAGTTTAGGCTTGGAAGTGACTAATGCAAACGTTACTAGCTTCAGAAGCCTTGTCTCTAATGTGTTTAAAGTAGAGAAAAGGGACAGTGAAATACTGCAAGCTGATGAAGTGAGGGACTCTTTGCTGGAGATAACGCGGAATCCCTCGAAAGGGTACTGGCCTGAGATGGCGAAAGCATCTGGGAATGATGGTGCTTTGGACTATGATCATGATAAACATCACTACCACCATCACCTCCACAACTACCATAGTCCTCCATATCACGTTCGACATCTTTATAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

550

Amino Acids

62.46

Weight (kDa)

5.34

Isoelectric Point (pI)

47.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	11 - 158	4.2e-16	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	304 - 347	4.5e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	424 - 500	6.1e-12	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	870, 1647
AccII	CGCG	2 cut(s)	495, 1504
AciI	CCGC	2 cut(s)	622, 1504
AclI	AACGTT	1 cut(s)	1398
AclWI	GGATC	4 cut(s)	569, 582, 765, 1236
AcsI	RAATTY	2 cut(s)	589, 1170
AcuI	CTGAAG	1 cut(s)	1393
AfaI	GTAC	5 cut(s)	535, 549, 709, 790, 1523
AfiI	CCNNNNNNNGG	9 cut(s)	50, 388, 401, 562, 1150, 1211, 1274, 1517, 1518
AflIII	ACRYGT	2 cut(s)	527, 667
AgsI	TTSAA	7 cut(s)	58, 267, 328, 354, 655, 1073, 1083
AhlI	ACTAGT	2 cut(s)	674, 710
AjnI	CCWGG	1 cut(s)	729
AluBI	AGCT	5 cut(s)	421, 937, 1100, 1407, 1469
AluI	AGCT	5 cut(s)	421, 937, 1100, 1407, 1469
Alw21I	GWGCWC	1 cut(s)	750
Alw26I	GTCTC	5 cut(s)	433, 445, 1036, 1342, 1426
AlwI	GGATC	4 cut(s)	569, 582, 765, 1236
AoxI	GGCC	1 cut(s)	1526
ApeKI	GCWGC	2 cut(s)	126, 217
ApoI	RAATTY	2 cut(s)	589, 1170
ArsI	GACNNNNNNTTYG	2 cut(s)	370, 402
AseI	ATTAAT	1 cut(s)	410
Asp700I	GAANNNNTTC	1 cut(s)	232
AspLEI	GCGC	1 cut(s)	495
AspS9I	GGNCC	1 cut(s)	378
AsuHPI	GGTGA	1 cut(s)	1592
AvaII	GGWCC	1 cut(s)	378
BamHI	GGATCC	1 cut(s)	574
BbsI	GAAGAC	1 cut(s)	102
Bbv12I	GWGCWC	1 cut(s)	750
BbvI	GCAGC	2 cut(s)	113, 229
BccI	CCATC	9 cut(s)	368, 565, 982, 1085, 1255, 1348, 1528, 1550, 1605
BceAI	ACGGC	2 cut(s)	1228, 1309
BciT130I	CCWGG	1 cut(s)	731
BciVI	GTATCC	1 cut(s)	202
BclI	TGATCA	2 cut(s)	510, 1573
BcoDI	GTCTC	5 cut(s)	433, 445, 1036, 1342, 1426
BcuI	ACTAGT	2 cut(s)	674, 710
BfaI	CTAG	4 cut(s)	365, 675, 711, 1404
BfmI	CTRYAG	1 cut(s)	399
BfuI	GTATCC	1 cut(s)	202
BisI	GCNGC	2 cut(s)	127, 218
BlsI	GCNGC	2 cut(s)	128, 219
BmcAI	AGTACT	1 cut(s)	709
Bme1390I	CCNGG	1 cut(s)	731
Bme18I	GGWCC	1 cut(s)	378
BmgT120I	GGNCC	1 cut(s)	378
BmiI	GGNNCC	6 cut(s)	379, 380, 393, 576, 972, 1266
BmrFI	CCNGG	1 cut(s)	731
BmsI	GCATC	4 cut(s)	574, 575, 1003, 1553
BpiI	GAAGAC	1 cut(s)	102
BpmI	CTGGAG	1 cut(s)	1514
BpuEI	CTTGAG	2 cut(s)	208, 992
BsaBI	GATNNNNATC	1 cut(s)	1584
BsaJI	CCNNGG	2 cut(s)	730, 1176
Bsc4I	CCNNNNNNNGG	9 cut(s)	50, 388, 401, 562, 1150, 1211, 1274, 1517, 1518
Bse1I	ACTGG	3 cut(s)	182, 1144, 1529
Bse8I	GATNNNNATC	1 cut(s)	1584
BseBI	CCWGG	1 cut(s)	731
BseDI	CCNNGG	2 cut(s)	730, 1176
BseGI	GGATG	1 cut(s)	1018
BseJI	GATNNNNATC	1 cut(s)	1584
BseLI	CCNNNNNNNGG	9 cut(s)	50, 388, 401, 562, 1150, 1211, 1274, 1517, 1518
BseMII	CTCAG	5 cut(s)	435, 627, 906, 1298, 1521
BseNI	ACTGG	3 cut(s)	182, 1144, 1529
BseRI	GAGGAG	2 cut(s)	325, 1110
BseXI	GCAGC	2 cut(s)	113, 229
BseYI	CCCAGC	1 cut(s)	63
BsgI	GTGCAG	1 cut(s)	223
Bsh1236I	CGCG	2 cut(s)	495, 1504
BshFI	GGCC	1 cut(s)	1528
BsiHKAI	GWGCWC	1 cut(s)	750
BslFI	GGGAC	5 cut(s)	391, 625, 1263, 1463, 1496
BslI	CCNNNNNNNGG	9 cut(s)	50, 388, 401, 562, 1150, 1211, 1274, 1517, 1518
BsmAI	GTCTC	5 cut(s)	433, 445, 1036, 1342, 1426
BsmBI	CGTCTC	1 cut(s)	433
BsmFI	GGGAC	5 cut(s)	391, 625, 1263, 1463, 1496
BsnI	GGCC	1 cut(s)	1528
Bsp1286I	GDGCHC	1 cut(s)	750
Bsp143I	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
Bsp19I	CCATGG	1 cut(s)	1176
BspACI	CCGC	2 cut(s)	622, 1504
BspANI	GGCC	1 cut(s)	1528
BspCNI	CTCAG	5 cut(s)	436, 628, 907, 1297, 1522
BspFNI	CGCG	2 cut(s)	495, 1504
BspHI	TCATGA	2 cut(s)	580, 1576
BspLI	GGNNCC	6 cut(s)	379, 380, 393, 576, 972, 1266
BspMAI	CTGCAG	1 cut(s)	403
BspPI	GGATC	4 cut(s)	569, 582, 765, 1236
BspQI	GCTCTTC	1 cut(s)	637
BsrI	ACTGG	3 cut(s)	182, 1144, 1529
BssECI	CCNNGG	2 cut(s)	730, 1176
BssMI	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
BssT1I	CCWWGG	1 cut(s)	1176
Bst2UI	CCWGG	1 cut(s)	731
Bst4CI	ACNGT	4 cut(s)	610, 707, 1315, 1454
Bst6I	CTCTTC	2 cut(s)	637, 917
BstC8I	GCNNGC	3 cut(s)	497, 520, 1467
BstDEI	CTNAG	9 cut(s)	38, 274, 444, 636, 915, 984, 1101, 1284, 1530
BstDSI	CCRYGG	1 cut(s)	1176
BstF5I	GGATG	1 cut(s)	1018
BstFNI	CGCG	2 cut(s)	495, 1504
BstHHI	GCGC	1 cut(s)	495
BstKTI	GATC	6 cut(s)	513, 577, 616, 760, 1231, 1576
BstMAI	GTCTC	5 cut(s)	433, 445, 1036, 1342, 1426
BstMBI	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
BstMWI	GCNNNNNNNGC	2 cut(s)	1264, 1413
BstNI	CCWGG	1 cut(s)	731
BstNSI	RCATGY	2 cut(s)	531, 671
BstSCI	CCNGG	1 cut(s)	729
BstSFI	CTRYAG	1 cut(s)	399
BstUI	CGCG	2 cut(s)	495, 1504
BstV1I	GCAGC	2 cut(s)	113, 229
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	1 cut(s)	574
BstXI	CCANNNNNNTGG	1 cut(s)	161
BstYI	RGATCY	1 cut(s)	574
BsuI	GTATCC	1 cut(s)	202
BsuRI	GGCC	1 cut(s)	1528
BtgI	CCRYGG	1 cut(s)	1176
BtsCI	GGATG	1 cut(s)	1018
BtsI	GCAGTG	1 cut(s)	850
BtsIMutI	CAGTG	5 cut(s)	206, 520, 850, 1320, 1459
Cac8I	GCNNGC	3 cut(s)	497, 520, 1467
CciI	TCATGA	2 cut(s)	580, 1576
CfoI	GCGC	1 cut(s)	495
Cfr13I	GGNCC	1 cut(s)	378
Csp6I	GTAC	5 cut(s)	534, 548, 708, 789, 1522
CviQI	GTAC	5 cut(s)	534, 548, 708, 789, 1522
DdeI	CTNAG	9 cut(s)	38, 274, 444, 636, 915, 984, 1101, 1284, 1530
DpnI	GATC	6 cut(s)	512, 576, 615, 759, 1230, 1575
DpnII	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
DraI	TTTAAA	1 cut(s)	1435
Eam1104I	CTCTTC	2 cut(s)	637, 917
EarI	CTCTTC	2 cut(s)	637, 917
EciI	GGCGGA	1 cut(s)	611
Eco130I	CCWWGG	1 cut(s)	1176
Eco32I	GATATC	2 cut(s)	244, 604
Eco47I	GGWCC	1 cut(s)	378
Eco57I	CTGAAG	1 cut(s)	1393
EcoO109I	RGGNCCY	1 cut(s)	378
EcoRII	CCWGG	1 cut(s)	729
EcoRV	GATATC	2 cut(s)	244, 604
EcoT14I	CCWWGG	1 cut(s)	1176
ErhI	CCWWGG	1 cut(s)	1176
Esp3I	CGTCTC	1 cut(s)	433
FalI	AAGNNNNNCTT	2 cut(s)	1053, 1085
FaqI	GGGAC	5 cut(s)	391, 625, 1263, 1463, 1496
FbaI	TGATCA	2 cut(s)	510, 1573
Fnu4HI	GCNGC	2 cut(s)	127, 218
FokI	GGATG	1 cut(s)	1025
Fsp4HI	GCNGC	2 cut(s)	127, 218
FspBI	CTAG	4 cut(s)	365, 675, 711, 1404
GlaI	GCGC	1 cut(s)	494
GluI	GCNGC	2 cut(s)	127, 218
GsaI	CCCAGC	1 cut(s)	67
GsuI	CTGGAG	1 cut(s)	1514
HaeIII	GGCC	1 cut(s)	1528
HhaI	GCGC	1 cut(s)	495
Hin6I	GCGC	1 cut(s)	493
HinP1I	GCGC	1 cut(s)	493
HindIII	AAGCTT	1 cut(s)	935
HphI	GGTGA	1 cut(s)	1592
Hpy166II	GTNNAC	1 cut(s)	164
Hpy188I	TCNGA	9 cut(s)	24, 445, 637, 688, 838, 1150, 1158, 1228, 1412
Hpy188III	TCNNGA	8 cut(s)	82, 225, 581, 794, 803, 1125, 1220, 1577
Hpy8I	GTNNAC	1 cut(s)	164
HpyAV	CCTTC	4 cut(s)	270, 654, 1240, 1331
HpyCH4III	ACNGT	4 cut(s)	610, 707, 1315, 1454
HpyCH4IV	ACGT	2 cut(s)	1398, 1632
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1264, 1413
HpyF3I	CTNAG	9 cut(s)	38, 274, 444, 636, 915, 984, 1101, 1284, 1530
HpySE526I	ACGT	2 cut(s)	1398, 1632
HspAI	GCGC	1 cut(s)	493
KflI	GGGWCCC	1 cut(s)	378
Ksp22I	TGATCA	2 cut(s)	510, 1573
Kzo9I	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
LguI	GCTCTTC	1 cut(s)	637
LmnI	GCTCC	4 cut(s)	338, 778, 1097, 1264
Lsp1109I	GCAGC	2 cut(s)	113, 229
LweI	GCATC	4 cut(s)	574, 575, 1003, 1553
MaeI	CTAG	4 cut(s)	365, 675, 711, 1404
MaeII	ACGT	2 cut(s)	1398, 1632
MalI	GATC	6 cut(s)	512, 576, 615, 759, 1230, 1575
MboI	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
MboII	GAAGA	8 cut(s)	107, 248, 255, 624, 712, 934, 939, 1100
MflI	RGATCY	1 cut(s)	574
MhlI	GDGCHC	1 cut(s)	750
MlyI	GAGTC	4 cut(s)	272, 647, 1217, 1478
MmeI	TCCRAC	1 cut(s)	419
MroXI	GAANNNNTTC	1 cut(s)	232
MseI	TTAA	5 cut(s)	89, 410, 939, 1113, 1434
MslI	CAYNNNNRTG	1 cut(s)	11
MspR9I	CCNGG	1 cut(s)	731
MvaI	CCWGG	1 cut(s)	731
MvnI	CGCG	2 cut(s)	495, 1504
MwoI	GCNNNNNNNGC	2 cut(s)	1264, 1413
NcoI	CCATGG	1 cut(s)	1176
NdeII	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
NlaIV	GGNNCC	6 cut(s)	379, 380, 393, 576, 972, 1266
NmuCI	GTSAC	6 cut(s)	670, 845, 1196, 1220, 1309, 1384
NspI	RCATGY	2 cut(s)	531, 671
PagI	TCATGA	2 cut(s)	580, 1576
PciI	ACATGT	2 cut(s)	527, 667
PciSI	GCTCTTC	1 cut(s)	637
PdmI	GAANNNNTTC	1 cut(s)	232
PfeI	GAWTC	6 cut(s)	350, 618, 806, 1003, 1159, 1507
PkrI	GCNGC	2 cut(s)	128, 219
PleI	GAGTC	4 cut(s)	272, 646, 1217, 1478
PpsI	GAGTC	4 cut(s)	272, 646, 1217, 1478
PpuMI	RGGWCCY	1 cut(s)	378
PscI	ACATGT	2 cut(s)	527, 667
PshBI	ATTAAT	1 cut(s)	410
PsiI	TTATAA	2 cut(s)	870, 1647
Psp1406I	AACGTT	1 cut(s)	1398
Psp5II	RGGWCCY	1 cut(s)	378
Psp6I	CCWGG	1 cut(s)	729
PspFI	CCCAGC	1 cut(s)	63
PspGI	CCWGG	1 cut(s)	729
PspN4I	GGNNCC	6 cut(s)	379, 380, 393, 576, 972, 1266
PspPI	GGNCC	1 cut(s)	378
PspPPI	RGGWCCY	1 cut(s)	378
PstI	CTGCAG	1 cut(s)	403
PsuI	RGATCY	1 cut(s)	574
RsaI	GTAC	5 cut(s)	535, 549, 709, 790, 1523
RsaNI	GTAC	5 cut(s)	534, 548, 708, 789, 1522
RseI	CAYNNNNRTG	1 cut(s)	11
SapI	GCTCTTC	1 cut(s)	637
SaqAI	TTAA	5 cut(s)	89, 410, 939, 1113, 1434
SatI	GCNGC	2 cut(s)	127, 218
Sau3AI	GATC	6 cut(s)	510, 574, 613, 757, 1228, 1573
Sau96I	GGNCC	1 cut(s)	378
ScaI	AGTACT	1 cut(s)	709
SchI	GAGTC	4 cut(s)	272, 647, 1217, 1478
ScrFI	CCNGG	1 cut(s)	731
SduI	GDGCHC	1 cut(s)	750
SfaNI	GCATC	4 cut(s)	574, 575, 1003, 1553
SfcI	CTRYAG	1 cut(s)	399
SinI	GGWCC	1 cut(s)	378
SmiMI	CAYNNNNRTG	1 cut(s)	11
SmlI	CTYRAG	2 cut(s)	223, 1007
SmoI	CTYRAG	2 cut(s)	223, 1007
SpeI	ACTAGT	2 cut(s)	674, 710
SsiI	CCGC	2 cut(s)	622, 1504
SspMI	CTAG	4 cut(s)	365, 675, 711, 1404
StyD4I	CCNGG	1 cut(s)	729
StyI	CCWWGG	1 cut(s)	1176
TaaI	ACNGT	4 cut(s)	610, 707, 1315, 1454
TaiI	ACGT	2 cut(s)	1401, 1635
TaqI	TCGA	5 cut(s)	616, 809, 1001, 1514, 1636
TatI	WGTACW	3 cut(s)	533, 547, 707
TfiI	GAWTC	6 cut(s)	350, 618, 806, 1003, 1159, 1507
Tru1I	TTAA	5 cut(s)	89, 410, 939, 1113, 1434
Tru9I	TTAA	5 cut(s)	89, 410, 939, 1113, 1434
TscAI	CASTG	5 cut(s)	206, 520, 850, 1320, 1459
TseFI	GTSAC	6 cut(s)	670, 845, 1196, 1220, 1309, 1384
TseI	GCWGC	2 cut(s)	126, 217
Tsp45I	GTSAC	6 cut(s)	670, 845, 1196, 1220, 1309, 1384
TspDTI	ATGAA	6 cut(s)	17, 97, 457, 713, 1101, 1488
TspRI	CASTG	5 cut(s)	206, 520, 850, 1320, 1459
VpaK11BI	GGWCC	1 cut(s)	378
VspI	ATTAAT	1 cut(s)	410
XapI	RAATTY	2 cut(s)	589, 1170
XceI	RCATGY	2 cut(s)	531, 671
XmnI	GAANNNNTTC	1 cut(s)	232
XspI	CTAG	4 cut(s)	365, 675, 711, 1404
ZrmI	AGTACT	1 cut(s)	709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.