Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Forward (+)

39453913 .. 39457100

Gene Structure 3188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G019750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGATCTCTACCTTTGTTTTTTCTGTTGTGCTTTTATTGCTTCTTCCATCCTCGTCTTGTTTTTCTTACTAAGTTGTTCAGTACTGCCCAAAATCTCGAGAGCAAGACAAACTACTCATATCATCAGCTGCAAGCTAGGTGTCATGAACAATATCATCATGTCAAATCTCATACCGAGGCTTAGACCCCTTGTGGGTTTGAAAGGATGGGATTTTTGTGTTGTCTGGAAACTTAGTGAAGACCAAAGGTTTGTTGAGTGGATGGATTGTTGCTGTTCGGGGACTGAAATTACTCAAGATGTTGGATATGAAGACCATCTTCTTTTTCCAGTAGTTTCTGCAGTCCTTCCTTGTAGGGATACCTTGTTACAGCATCCAAGAACCAGATCTTGTGATTTTCTTTCCAAAATGTCTTCTTCAGTTCCCCTAGATTCCGGGATTTATGCAGAGACTTTAATGTCAAACCAACCCAGTTGGTTAAACTTCTCTGACAGTAGTACATATTCGAGTACTAATGAAACTGTTGGGACCAGGGTTTTGATGCCAATACCAGGAGGACTAATTGAGCTTCTTGTTGCCAAACAAGTACTTGAAGACCAGAATGTCATCGATTTCATCACAGAGCAATACAACATCTCAATAGAACAGGATCATATTGGTACAAGCTTTGGGGTAAACTTGGACACAATGACTCATGATGAAATCCAATCAGAGCCAGTACTTTTAGACCACGAACAAATGGATCCCAGCAATCATGTTTTCTGCTCTGGCGATAATTCTGCCCTGAACTTCTTGCAGCAGTTTAGTCACAACTTGGGAAACAGGATGAAGAACATTAGTTATAATGTCAATTCTTTTGAAGATTCATCACATGCACCATTTCTTTCTGATAAGCAAATGGAGCACCCATTTACTAATTGTTCGAAAAAAACTGGGTTTGATCAAGCAACGGAGGCAATGCAAAGGTCCATGATGATGAGTGAGACACAAGCCACACACCATATGCATATGCAATATATGGATCAGTCATTAGAACCAGGCATGGATCATGAGCTGGAGCAGGATGCCGGCAATAATGATAAGGACTCAAATATTATAAATGATGATGGGGGACATGCTACAGATTTGAACTCAGATTGCAGTGATCATGATCAGCTTGATGCTGAGGATGGTGCAAAATATCGGAGGAGGAATGGAAAAGGGCAGGCCAAAAACCTTGTTGCAGAGAGAAAGAGAAGGAAGAAGCTTAATGACAGGCTCTATGAACTTAGGTCTTTAGTTCCCAATATTTCCAAGTTGGATAGAGCTTCTATTCTTGGGGATGCAATAGAGTATGTGATGGAGTTGCAGAACCAAGCTAAAATACTCCAAGATGAGCTTAATGATGATCATGATCACGAAGAAGTTCGCCATGTTCATGAAGGTGCTGCTAATAAGAACTGTGGCATCACTTTCCAACATAACAGTTTACAATCAGAGATTGATCAGAGTCAAAGTGGGGTTGACCTTAAAACTGAGCAAAATGATCATAAAGCTCCAAATGGGTTTCATTTGGGAACATCAGGAGACGGTAGTGTCTCAAAACAAAGCCCCGATTCAGAAGTTATCCACGATCACAAGACACAGCAGATGGAGCCCCAAGTGGAAGTAGCTCAAATAGATGGGAATCAGTTCTTTGTGAAAGTATTCTGTGAGCACAAGCCTGGTGGATTTGTGAGATTGATGGAGGCATTGAGCTCTCTGAGCCTGGAAGTTACTAATGCCAATGTAACTAGCTTCAGATGCCTTGTCTCTAATGTCTTCATCGTAGAGAAGAAGGATAGTGAACTAGTTGAAGCTGATGAAGTGAGAGACTCGTTGCTAGAGCTAACAAGGAACCCCTTAAAATGGCGTAGTGAGGAAATGGCGAAAGCATCAGAGATTGGGATTGGCTTGGATAACAACCACCACCATCATCCCCATCACCAAAACCTCCACAACCACCATTTCAGTCCCTTCCACTTGCACCATCTTCCTACTGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

675

Amino Acids

76.26

Weight (kDa)

5.23

Isoelectric Point (pI)

55.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	60 - 207	2.8e-18	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	407 - 450	2.1e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	547 - 621	6.1e-12	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	843, 1097
AasI	GACNNNNNNGTC	3 cut(s)	457, 602, 1574
AclWI	GGATC	6 cut(s)	12, 657, 737, 750, 1029, 1053
AcuI	CTGAAG	2 cut(s)	402, 1762
AfaI	GTAC	6 cut(s)	84, 499, 511, 588, 661, 720
AfiI	CCNNNNNNNGG	3 cut(s)	194, 551, 1887
AgsI	TTSAA	5 cut(s)	202, 593, 860, 1129, 1835
AhlI	ACTAGT	1 cut(s)	1828
AjnI	CCWGG	5 cut(s)	530, 550, 1036, 1702, 1746
Alw21I	GWGCWC	3 cut(s)	906, 1698, 1739
Alw26I	GTCTC	6 cut(s)	443, 977, 1560, 1582, 1795, 1845
AlwI	GGATC	6 cut(s)	12, 657, 737, 750, 1029, 1053
Ama87I	CYCGRG	1 cut(s)	97
AoxI	GGCC	1 cut(s)	1206
ApeKI	GCWGC	3 cut(s)	129, 796, 1427
ArsI	GACNNNNNNTTYG	4 cut(s)	233, 265, 520, 552
Asp700I	GAANNNNTTC	3 cut(s)	1404, 1670, 1685
AspS9I	GGNCC	2 cut(s)	528, 966
AsuC2I	CCSGG	1 cut(s)	436
AsuHPI	GGTGA	1 cut(s)	1955
AsuII	TTCGAA	1 cut(s)	923
AvaI	CYCGRG	1 cut(s)	97
AvaII	GGWCC	2 cut(s)	528, 966
BamHI	GGATCC	1 cut(s)	742
BanII	GRGCYC	2 cut(s)	1638, 1739
BbsI	GAAGAC	5 cut(s)	246, 318, 405, 600, 1792
Bbv12I	GWGCWC	3 cut(s)	906, 1698, 1739
BbvCI	CCTCAGC	1 cut(s)	1164
BbvI	GCAGC	3 cut(s)	116, 808, 1414
BcgI	CGANNNNNNTGC	2 cut(s)	761, 795
BciT130I	CCWGG	5 cut(s)	532, 552, 1038, 1704, 1748
BciVI	GTATCC	1 cut(s)	352
BclI	TGATCA	7 cut(s)	940, 1144, 1150, 1387, 1393, 1483, 1525
BcnI	CCSGG	1 cut(s)	436
BcoDI	GTCTC	6 cut(s)	443, 977, 1560, 1582, 1795, 1845
BcuI	ACTAGT	1 cut(s)	1828
BfaI	CTAG	5 cut(s)	137, 428, 1773, 1829, 1862
BfmI	CTRYAG	2 cut(s)	339, 1119
BfuI	GTATCC	1 cut(s)	352
BglII	AGATCT	1 cut(s)	386
BisI	GCNGC	3 cut(s)	130, 797, 1428
BlsI	GCNGC	3 cut(s)	131, 798, 1429
BmcAI	AGTACT	4 cut(s)	84, 511, 588, 720
Bme1390I	CCNGG	6 cut(s)	436, 532, 552, 1038, 1704, 1748
Bme18I	GGWCC	2 cut(s)	528, 966
BmeT110I	CYCGRG	1 cut(s)	97
BmgT120I	GGNCC	2 cut(s)	528, 966
BmiI	GGNNCC	4 cut(s)	529, 744, 1635, 1877
BmrFI	CCNGG	6 cut(s)	436, 532, 552, 1038, 1704, 1748
BmrI	ACTGGG	2 cut(s)	465, 942
BmsI	GCATC	8 cut(s)	382, 531, 1054, 1150, 1312, 1455, 1772, 1922
BmuI	ACTGGG	2 cut(s)	465, 942
BpiI	GAAGAC	5 cut(s)	246, 318, 405, 600, 1792
BpmI	CTGGAG	1 cut(s)	1076
Bpu10I	CCTNAGC	1 cut(s)	1164
Bpu14I	TTCGAA	1 cut(s)	923
BpuEI	CTTGAG	1 cut(s)	279
BpuMI	CCSGG	1 cut(s)	436
Bsa29I	ATCGAT	1 cut(s)	609
BsaBI	GATNNNNATC	3 cut(s)	1149, 1392, 1665
BsaJI	CCNNGG	2 cut(s)	176, 531
Bsc4I	CCNNNNNNNGG	3 cut(s)	194, 551, 1887
Bse118I	RCCGGY	1 cut(s)	1067
Bse1I	ACTGG	4 cut(s)	329, 471, 716, 937
Bse3DI	GCAATG	1 cut(s)	963
Bse8I	GATNNNNATC	3 cut(s)	1149, 1392, 1665
BseBI	CCWGG	5 cut(s)	532, 552, 1038, 1704, 1748
BseCI	ATCGAT	1 cut(s)	609
BseDI	CCNNGG	2 cut(s)	176, 531
BseGI	GGATG	9 cut(s)	48, 212, 267, 373, 831, 1069, 1174, 1327, 1954
BseJI	GATNNNNATC	3 cut(s)	1149, 1392, 1665
BseLI	CCNNNNNNNGG	3 cut(s)	194, 551, 1887
BseMI	GCAATG	1 cut(s)	963
BseMII	CTCAG	4 cut(s)	1146, 1155, 1506, 1733
BseNI	ACTGG	4 cut(s)	329, 471, 716, 937
BseRI	GAGGAG	1 cut(s)	1201
BseXI	GCAGC	3 cut(s)	116, 808, 1414
BseYI	CCCAGC	1 cut(s)	746
BshFI	GGCC	1 cut(s)	1208
BshVI	ATCGAT	1 cut(s)	609
BsiHKAI	GWGCWC	3 cut(s)	906, 1698, 1739
BsiHKCI	CYCGRG	1 cut(s)	97
BsiSI	CCGG	2 cut(s)	435, 1068
BslFI	GGGAC	4 cut(s)	295, 541, 1125, 1977
BslI	CCNNNNNNNGG	3 cut(s)	194, 551, 1887
BsmAI	GTCTC	6 cut(s)	443, 977, 1560, 1582, 1795, 1845
BsmBI	CGTCTC	1 cut(s)	1560
BsmFI	GGGAC	4 cut(s)	295, 541, 1125, 1977
BsnI	GGCC	1 cut(s)	1208
BsoBI	CYCGRG	1 cut(s)	97
Bsp119I	TTCGAA	1 cut(s)	923
Bsp1286I	GDGCHC	4 cut(s)	906, 1638, 1698, 1739
BspANI	GGCC	1 cut(s)	1208
BspCNI	CTCAG	4 cut(s)	1145, 1156, 1507, 1734
BspDI	ATCGAT	1 cut(s)	609
BspHI	TCATGA	6 cut(s)	144, 694, 1048, 1147, 1390, 1417
BspLI	GGNNCC	4 cut(s)	529, 744, 1635, 1877
BspMAI	CTGCAG	1 cut(s)	343
BspPI	GGATC	6 cut(s)	12, 657, 737, 750, 1029, 1053
BspT104I	TTCGAA	1 cut(s)	923
BsrDI	GCAATG	1 cut(s)	963
BsrFI	RCCGGY	1 cut(s)	1067
BsrI	ACTGG	4 cut(s)	329, 471, 716, 937
BssAI	RCCGGY	1 cut(s)	1067
BssECI	CCNNGG	2 cut(s)	176, 531
Bst2UI	CCWGG	5 cut(s)	532, 552, 1038, 1704, 1748
Bst4CI	ACNGT	5 cut(s)	494, 523, 1442, 1466, 1571
BstBI	TTCGAA	1 cut(s)	923
BstC8I	GCNNGC	3 cut(s)	134, 1069, 1206
BstDEI	CTNAG	8 cut(s)	71, 182, 233, 1132, 1164, 1268, 1515, 1742
BstF5I	GGATG	9 cut(s)	48, 212, 267, 373, 831, 1069, 1174, 1327, 1954
BstMAI	GTCTC	6 cut(s)	443, 977, 1560, 1582, 1795, 1845
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 901, 953, 1633, 1743, 1782
BstNI	CCWGG	5 cut(s)	532, 552, 1038, 1704, 1748
BstNSI	RCATGY	2 cut(s)	875, 1118
BstSCI	CCNGG	6 cut(s)	434, 530, 550, 1036, 1702, 1746
BstSFI	CTRYAG	2 cut(s)	339, 1119
BstV1I	GCAGC	3 cut(s)	116, 808, 1414
BstV2I	GAAGAC	5 cut(s)	246, 318, 405, 600, 1792
BstX2I	RGATCY	3 cut(s)	4, 386, 742
BstYI	RGATCY	3 cut(s)	4, 386, 742
Bsu15I	ATCGAT	1 cut(s)	609
BsuI	GTATCC	1 cut(s)	352
BsuRI	GGCC	1 cut(s)	1208
BsuTUI	ATCGAT	1 cut(s)	609
BtsCI	GGATG	9 cut(s)	48, 212, 267, 373, 831, 1069, 1174, 1327, 1954
BtsI	GCAGTG	1 cut(s)	1147
BtsIMutI	CAGTG	1 cut(s)	1147
Cac8I	GCNNGC	3 cut(s)	134, 1069, 1206
CciI	TCATGA	6 cut(s)	144, 694, 1048, 1147, 1390, 1417
Cfr10I	RCCGGY	1 cut(s)	1067
Cfr13I	GGNCC	2 cut(s)	528, 966
ClaI	ATCGAT	1 cut(s)	609
Csp6I	GTAC	6 cut(s)	83, 498, 510, 587, 660, 719
CspCI	CAANNNNNGTGG	2 cut(s)	1687, 1722
CviQI	GTAC	6 cut(s)	83, 498, 510, 587, 660, 719
DdeI	CTNAG	8 cut(s)	71, 182, 233, 1132, 1164, 1268, 1515, 1742
DrdI	GACNNNNNNGTC	3 cut(s)	457, 602, 1574
DseDI	GACNNNNNNGTC	3 cut(s)	457, 602, 1574
Ecl136II	GAGCTC	1 cut(s)	1737
Eco24I	GRGCYC	2 cut(s)	1638, 1739
Eco47I	GGWCC	2 cut(s)	528, 966
Eco53kI	GAGCTC	1 cut(s)	1737
Eco57I	CTGAAG	2 cut(s)	402, 1762
Eco88I	CYCGRG	1 cut(s)	97
EcoICRI	GAGCTC	1 cut(s)	1737
EcoRII	CCWGG	5 cut(s)	530, 550, 1036, 1702, 1746
EcoT22I	ATGCAT	1 cut(s)	1008
EcoT38I	GRGCYC	2 cut(s)	1638, 1739
Esp3I	CGTCTC	1 cut(s)	1560
FalI	AAGNNNNNCTT	4 cut(s)	303, 335, 1362, 1394
FaqI	GGGAC	4 cut(s)	295, 541, 1125, 1977
FauNDI	CATATG	2 cut(s)	1002, 1008
FbaI	TGATCA	7 cut(s)	940, 1144, 1150, 1387, 1393, 1483, 1525
Fnu4HI	GCNGC	3 cut(s)	130, 797, 1428
FokI	GGATG	9 cut(s)	35, 219, 274, 360, 838, 1076, 1181, 1334, 1941
FriOI	GRGCYC	2 cut(s)	1638, 1739
Fsp4HI	GCNGC	3 cut(s)	130, 797, 1428
FspBI	CTAG	5 cut(s)	137, 428, 1773, 1829, 1862
GluI	GCNGC	3 cut(s)	130, 797, 1428
GsaI	CCCAGC	1 cut(s)	750
GsuI	CTGGAG	1 cut(s)	1076
HaeIII	GGCC	1 cut(s)	1208
HapII	CCGG	2 cut(s)	435, 1068
HincII	GTYRAC	1 cut(s)	1504
HindII	GTYRAC	1 cut(s)	1504
HindIII	AAGCTT	2 cut(s)	664, 1244
HinfI	GANTC	8 cut(s)	431, 691, 863, 1085, 1489, 1595, 1666, 1853
HpaII	CCGG	2 cut(s)	435, 1068
HphI	GGTGA	1 cut(s)	1955
Hpy166II	GTNNAC	4 cut(s)	676, 1469, 1504, 1826
Hpy8I	GTNNAC	4 cut(s)	676, 1469, 1504, 1826
HpyAV	CCTTC	5 cut(s)	356, 1230, 1415, 1810, 2005
HpyCH4III	ACNGT	5 cut(s)	494, 523, 1442, 1466, 1571
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 901, 953, 1633, 1743, 1782
HpyF3I	CTNAG	8 cut(s)	71, 182, 233, 1132, 1164, 1268, 1515, 1742
KroI	GCCGGC	1 cut(s)	1067
KroNI	GCCGGC	1 cut(s)	1069
Ksp22I	TGATCA	7 cut(s)	940, 1144, 1150, 1387, 1393, 1483, 1525
LmnI	GCTCC	4 cut(s)	901, 1057, 1540, 1633
Lsp1109I	GCAGC	3 cut(s)	116, 808, 1414
LweI	GCATC	8 cut(s)	382, 531, 1054, 1150, 1312, 1455, 1772, 1922
MaeI	CTAG	5 cut(s)	137, 428, 1773, 1829, 1862
MaeIII	GTNAC	4 cut(s)	366, 806, 1753, 1768
MflI	RGATCY	3 cut(s)	4, 386, 742
MhlI	GDGCHC	4 cut(s)	906, 1638, 1698, 1739
MluCI	AATT	5 cut(s)	288, 561, 775, 850, 916
MlyI	GAGTC	4 cut(s)	685, 1079, 1498, 1847
MmeI	TCCRAC	3 cut(s)	283, 1278, 1480
Mph1103I	ATGCAT	1 cut(s)	1008
MroNI	GCCGGC	1 cut(s)	1067
MroXI	GAANNNNTTC	3 cut(s)	1404, 1670, 1685
MseI	TTAA	6 cut(s)	455, 479, 1248, 1380, 1509, 1883
MslI	CAYNNNNRTG	3 cut(s)	974, 1416, 1422
MspA1I	CMGCKG	1 cut(s)	129
MspI	CCGG	2 cut(s)	435, 1068
MspR9I	CCNGG	6 cut(s)	436, 532, 552, 1038, 1704, 1748
MvaI	CCWGG	5 cut(s)	532, 552, 1038, 1704, 1748
MwoI	GCNNNNNNNGC	6 cut(s)	38, 901, 953, 1633, 1743, 1782
NaeI	GCCGGC	1 cut(s)	1069
NciI	CCSGG	1 cut(s)	436
NdeI	CATATG	2 cut(s)	1002, 1008
NgoMIV	GCCGGC	1 cut(s)	1067
NlaIV	GGNNCC	4 cut(s)	529, 744, 1635, 1877
NmuCI	GTSAC	1 cut(s)	806
NsiI	ATGCAT	1 cut(s)	1008
NspI	RCATGY	2 cut(s)	875, 1118
NspV	TTCGAA	1 cut(s)	923
PaeR7I	CTCGAG	1 cut(s)	97
PagI	TCATGA	6 cut(s)	144, 694, 1048, 1147, 1390, 1417
PdiI	GCCGGC	1 cut(s)	1069
PdmI	GAANNNNTTC	3 cut(s)	1404, 1670, 1685
PfeI	GAWTC	4 cut(s)	431, 863, 1595, 1666
PfoI	TCCNGGA	1 cut(s)	434
PkrI	GCNGC	3 cut(s)	131, 798, 1429
PleI	GAGTC	4 cut(s)	685, 1079, 1497, 1847
PpsI	GAGTC	4 cut(s)	685, 1079, 1497, 1847
PsiI	TTATAA	2 cut(s)	843, 1097
Psp124BI	GAGCTC	1 cut(s)	1739
Psp6I	CCWGG	5 cut(s)	530, 550, 1036, 1702, 1746
PspFI	CCCAGC	1 cut(s)	746
PspGI	CCWGG	5 cut(s)	530, 550, 1036, 1702, 1746
PspN4I	GGNNCC	4 cut(s)	529, 744, 1635, 1877
PspPI	GGNCC	2 cut(s)	528, 966
PstI	CTGCAG	1 cut(s)	343
PsuI	RGATCY	3 cut(s)	4, 386, 742
PvuII	CAGCTG	1 cut(s)	129
RsaI	GTAC	6 cut(s)	84, 499, 511, 588, 661, 720
RsaNI	GTAC	6 cut(s)	83, 498, 510, 587, 660, 719
RseI	CAYNNNNRTG	3 cut(s)	974, 1416, 1422
SacI	GAGCTC	1 cut(s)	1739
SaqAI	TTAA	6 cut(s)	455, 479, 1248, 1380, 1509, 1883
SatI	GCNGC	3 cut(s)	130, 797, 1428
Sau96I	GGNCC	2 cut(s)	528, 966
ScaI	AGTACT	4 cut(s)	84, 511, 588, 720
SchI	GAGTC	4 cut(s)	685, 1079, 1498, 1847
ScrFI	CCNGG	6 cut(s)	436, 532, 552, 1038, 1704, 1748
SduI	GDGCHC	4 cut(s)	906, 1638, 1698, 1739
SfaNI	GCATC	8 cut(s)	382, 531, 1054, 1150, 1312, 1455, 1772, 1922
SfcI	CTRYAG	2 cut(s)	339, 1119
Sfr274I	CTCGAG	1 cut(s)	97
SfuI	TTCGAA	1 cut(s)	923
SinI	GGWCC	2 cut(s)	528, 966
SlaI	CTCGAG	1 cut(s)	97
SmiMI	CAYNNNNRTG	3 cut(s)	974, 1416, 1422
SmlI	CTYRAG	2 cut(s)	97, 294
SmoI	CTYRAG	2 cut(s)	97, 294
SpeI	ACTAGT	1 cut(s)	1828
Sse9I	AATT	5 cut(s)	288, 561, 775, 850, 916
SspI	AATATT	2 cut(s)	1093, 1288
SspMI	CTAG	5 cut(s)	137, 428, 1773, 1829, 1862
SstI	GAGCTC	1 cut(s)	1739
StyD4I	CCNGG	6 cut(s)	434, 530, 550, 1036, 1702, 1746
TaaI	ACNGT	5 cut(s)	494, 523, 1442, 1466, 1571
TaqI	TCGA	4 cut(s)	98, 506, 609, 923
TasI	AATT	5 cut(s)	288, 561, 775, 850, 916
TatI	WGTACW	5 cut(s)	82, 497, 509, 586, 718
TfiI	GAWTC	4 cut(s)	431, 863, 1595, 1666
Tru1I	TTAA	6 cut(s)	455, 479, 1248, 1380, 1509, 1883
Tru9I	TTAA	6 cut(s)	455, 479, 1248, 1380, 1509, 1883
TscAI	CASTG	1 cut(s)	1147
TseFI	GTSAC	1 cut(s)	806
TseI	GCWGC	3 cut(s)	129, 796, 1427
Tsp45I	GTSAC	1 cut(s)	806
TspGWI	ACGGA	1 cut(s)	965
TspRI	CASTG	1 cut(s)	1147
VpaK11BI	GGWCC	2 cut(s)	528, 966
XceI	RCATGY	2 cut(s)	875, 1118
XhoI	CTCGAG	1 cut(s)	97
XmnI	GAANNNNTTC	3 cut(s)	1404, 1670, 1685
XspI	CTAG	5 cut(s)	137, 428, 1773, 1829, 1862
ZrmI	AGTACT	4 cut(s)	84, 511, 588, 720
Zsp2I	ATGCAT	1 cut(s)	1008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.