Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Forward (+)

41578713 .. 41582380

Gene Structure 3668 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24979

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAACAATATCATCATGTCAAATCTCATACCGAGGCTTAGACCCCTTGTGGGTTTGAAAGGATGGGATTTTTGTGTTGTCTGGAAACTTAGTGAAGACCAAAGGTTTGTTGAGTGGATGGATTGTTGCTGTTCGGGGACTGAAATTACTCAAGATGTTGGATATGAAGACCATCTTCTTTTTCCAGTAGTTTCTGCAGTCCTTCCTTGTAGGGATACCTTGTTACAACATCCAAGAACCAGATCTTGTGATTTTCTTTCCAAAATGTCTTCTTCAGTTCCCCTAGATTCCGGGATTTATGCAGAGACTTTAATGTCAAACCAACCCAGTTGGTTAAACTTCTCTGACAGTAGTACATATTCGATTACTAATGTAGAAGAAACTGTTGGGACCAGGGTTTTGATGCCAATACCAGGAGGACTAATTGAGCTTCTTGTTGCCAAACAAGTACTTGAAGACCAGAATGTTATCGATTTCATCACAGAGCAATACAACATCTCAATAGAACAGGATCATATTGGTACAAGCTTTGGGGTAAACTTGGACACAATGATTCATGATGAAATCCAATCAAAGCCAGTACTTTTAGACCACGAACAAATGGATCCCAGCAATCATGTTTTCTGCTCTGGCGATAATTCTGCCATGAACTTCTTGCAGCAGTTTAGTCACAACTTGGGAAGCAGGATGAAGAACATTAGTTATAATGTCAATTCTTTTGAAGATTCATCACATGCACCATTTCTTTCTGATAAGCAAATGGAGCACCCATTTACTAATTGTTCGAAAAAAACTGGGTTTGATCAAGCAACGGAGGCAATGCAAAGGTCCATGATGATGAGTGAGACACAAGCCACACACCATATGCATATGCAATATATGGATCAGTCATTAGAACCAGGCATGGATCATGAGCTGGAGCAGGATGCCGGCAATAATGATAAGGACTCAAATATTATAAATGATGATGGGGGACATGCTACAGATTTGAACTCAGATTGCAGTGATCATGATCAGATTGATGCTGAGGATGATGCAAAATATCGGAGGAGGAACGGAAAAGGGCAGGCCAAAAACCTTGTTGCAGAGAGAAAGAGAAGGAAGAAGCTTAATGACAGGCTCTATGAACTTAGGTCTTTAGTTCCCAATATTTCCAAGTTGGATAGATCTTCTATTCTTGGGGATGCAATAGAGTATGTGATGGAGTTGCAGAACCAAGCTAAAAAACTTCAAGATGAGCTTGATGATGATCATGATCACGAAGAAGTTCGCCATGTTCATGAAGGTGCTGCTAATAAGAACTGTGGCGTCACTTTCCAACATAACAGTTTACAATCAGAGATTGATCAGATTCAAAGTGGGGTTGACCTTAAAACTGAGCAAAATGATCATAAAGCTCCAAATGGGTTTCATTTGGGAACATCAGGAGACGGTAGTGTCTCAAAACAAAGCCCCGATTCAGAAGTTATCCACGATCACAAGACACAGCAGATGGAGCCCCAAGTGGAAGTAGCTCAAATAGATGGGAATCAGTTCTTTGTGAAAGTATTCTGTGAGCACAAGCCTGGTGGATTTGTGAGATTGATGGAGGCATTGAGCTCTCTGAGCCTGGAAGTTACTAATGCCAATGTAACTAGCTTCAGATGCCTCGTCTCTAATGTCTTCATCGTAGAGAAGAAGGATAGTGAACTAGTTGAAGCTGATGAAGTGAGAGACTCGTTGCTAGAGCTAACAAGGAACCCCTTAAAATGGCGTAGTGAGGAAATGGCGAAAGCATCAGAGATTGGGATTGGCTTGGATAACAACCACCACCATCATCCCCATCACCAAAACCTCCACAACCACCATTTCAGTCCCTTCCACTTGCACCATCTTCCTACTGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

629

Amino Acids

71.26

Weight (kDa)

5.11

Isoelectric Point (pI)

55.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	12 - 161	2.7e-18	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	361 - 404	6.6e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	501 - 575	5.5e-12	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	705, 959
AasI	GACNNNNNNGTC	2 cut(s)	313, 1436
AclWI	GGATC	5 cut(s)	519, 599, 612, 891, 915
AcuI	CTGAAG	2 cut(s)	258, 1624
AcyI	GRCGYC	1 cut(s)	1308
AfaI	GTAC	4 cut(s)	355, 450, 523, 582
AfiI	CCNNNNNNNGG	3 cut(s)	50, 413, 1749
AgsI	TTSAA	7 cut(s)	58, 455, 722, 991, 1232, 1355, 1697
AhlI	ACTAGT	1 cut(s)	1690
AjnI	CCWGG	5 cut(s)	392, 412, 898, 1564, 1608
AjuI	GAANNNNNNNTTGG	2 cut(s)	369, 401
Alw21I	GWGCWC	3 cut(s)	768, 1560, 1601
Alw26I	GTCTC	6 cut(s)	299, 839, 1422, 1444, 1657, 1707
AlwI	GGATC	5 cut(s)	519, 599, 612, 891, 915
AoxI	GGCC	1 cut(s)	1068
ApeKI	GCWGC	2 cut(s)	658, 1289
ArsI	GACNNNNNNTTYG	4 cut(s)	89, 121, 382, 414
Asp700I	GAANNNNTTC	3 cut(s)	1266, 1532, 1547
AspS9I	GGNCC	2 cut(s)	390, 828
AsuC2I	CCSGG	1 cut(s)	292
AsuHPI	GGTGA	1 cut(s)	1817
AsuII	TTCGAA	1 cut(s)	785
AvaII	GGWCC	2 cut(s)	390, 828
BamHI	GGATCC	1 cut(s)	604
BanII	GRGCYC	2 cut(s)	1500, 1601
BbsI	GAAGAC	5 cut(s)	102, 174, 261, 462, 1654
Bbv12I	GWGCWC	3 cut(s)	768, 1560, 1601
BbvCI	CCTCAGC	1 cut(s)	1026
BbvI	GCAGC	2 cut(s)	670, 1276
BcgI	CGANNNNNNTGC	2 cut(s)	623, 657
BciT130I	CCWGG	5 cut(s)	394, 414, 900, 1566, 1610
BciVI	GTATCC	1 cut(s)	208
BclI	TGATCA	7 cut(s)	802, 1006, 1012, 1249, 1255, 1345, 1387
BcnI	CCSGG	1 cut(s)	292
BcoDI	GTCTC	6 cut(s)	299, 839, 1422, 1444, 1657, 1707
BcuI	ACTAGT	1 cut(s)	1690
BfaI	CTAG	4 cut(s)	284, 1635, 1691, 1724
BfmI	CTRYAG	2 cut(s)	195, 981
BfuI	GTATCC	1 cut(s)	208
BglII	AGATCT	2 cut(s)	242, 1166
BisI	GCNGC	2 cut(s)	659, 1290
BlsI	GCNGC	2 cut(s)	660, 1291
BmcAI	AGTACT	2 cut(s)	450, 582
Bme1390I	CCNGG	6 cut(s)	292, 394, 414, 900, 1566, 1610
Bme18I	GGWCC	2 cut(s)	390, 828
BmgT120I	GGNCC	2 cut(s)	390, 828
BmiI	GGNNCC	4 cut(s)	391, 606, 1497, 1739
BmrFI	CCNGG	6 cut(s)	292, 394, 414, 900, 1566, 1610
BmrI	ACTGGG	2 cut(s)	321, 804
BmsI	GCATC	7 cut(s)	393, 916, 1012, 1024, 1174, 1634, 1784
BmuI	ACTGGG	2 cut(s)	321, 804
BpiI	GAAGAC	5 cut(s)	102, 174, 261, 462, 1654
BpmI	CTGGAG	1 cut(s)	938
Bpu10I	CCTNAGC	1 cut(s)	1026
Bpu14I	TTCGAA	1 cut(s)	785
BpuEI	CTTGAG	1 cut(s)	135
BpuMI	CCSGG	1 cut(s)	292
Bsa29I	ATCGAT	1 cut(s)	471
BsaBI	GATNNNNATC	4 cut(s)	1011, 1248, 1254, 1527
BsaHI	GRCGYC	1 cut(s)	1308
BsaJI	CCNNGG	2 cut(s)	32, 393
Bsc4I	CCNNNNNNNGG	3 cut(s)	50, 413, 1749
Bse118I	RCCGGY	1 cut(s)	929
Bse1I	ACTGG	4 cut(s)	185, 327, 578, 799
Bse3DI	GCAATG	1 cut(s)	825
Bse8I	GATNNNNATC	4 cut(s)	1011, 1248, 1254, 1527
BseBI	CCWGG	5 cut(s)	394, 414, 900, 1566, 1610
BseCI	ATCGAT	1 cut(s)	471
BseDI	CCNNGG	2 cut(s)	32, 393
BseGI	GGATG	8 cut(s)	68, 123, 229, 693, 931, 1036, 1189, 1816
BseJI	GATNNNNATC	4 cut(s)	1011, 1248, 1254, 1527
BseLI	CCNNNNNNNGG	3 cut(s)	50, 413, 1749
BseMI	GCAATG	1 cut(s)	825
BseMII	CTCAG	4 cut(s)	1008, 1017, 1368, 1595
BseNI	ACTGG	4 cut(s)	185, 327, 578, 799
BseRI	GAGGAG	1 cut(s)	1063
BseXI	GCAGC	2 cut(s)	670, 1276
BseYI	CCCAGC	1 cut(s)	608
BshFI	GGCC	1 cut(s)	1070
BshVI	ATCGAT	1 cut(s)	471
BsiHKAI	GWGCWC	3 cut(s)	768, 1560, 1601
BsiSI	CCGG	2 cut(s)	291, 930
BslFI	GGGAC	4 cut(s)	151, 403, 987, 1839
BslI	CCNNNNNNNGG	3 cut(s)	50, 413, 1749
BsmAI	GTCTC	6 cut(s)	299, 839, 1422, 1444, 1657, 1707
BsmBI	CGTCTC	2 cut(s)	1422, 1657
BsmFI	GGGAC	4 cut(s)	151, 403, 987, 1839
BsnI	GGCC	1 cut(s)	1070
Bsp119I	TTCGAA	1 cut(s)	785
Bsp1286I	GDGCHC	4 cut(s)	768, 1500, 1560, 1601
BspANI	GGCC	1 cut(s)	1070
BspCNI	CTCAG	4 cut(s)	1007, 1018, 1369, 1596
BspDI	ATCGAT	1 cut(s)	471
BspHI	TCATGA	5 cut(s)	556, 910, 1009, 1252, 1279
BspLI	GGNNCC	4 cut(s)	391, 606, 1497, 1739
BspMAI	CTGCAG	1 cut(s)	199
BspPI	GGATC	5 cut(s)	519, 599, 612, 891, 915
BspT104I	TTCGAA	1 cut(s)	785
BsrDI	GCAATG	1 cut(s)	825
BsrFI	RCCGGY	1 cut(s)	929
BsrI	ACTGG	4 cut(s)	185, 327, 578, 799
BssAI	RCCGGY	1 cut(s)	929
BssECI	CCNNGG	2 cut(s)	32, 393
BssNI	GRCGYC	1 cut(s)	1308
Bst2UI	CCWGG	5 cut(s)	394, 414, 900, 1566, 1610
Bst4CI	ACNGT	5 cut(s)	350, 385, 1304, 1328, 1433
BstACI	GRCGYC	1 cut(s)	1308
BstBI	TTCGAA	1 cut(s)	785
BstC8I	GCNNGC	2 cut(s)	931, 1068
BstDEI	CTNAG	7 cut(s)	38, 89, 994, 1026, 1130, 1377, 1604
BstF5I	GGATG	8 cut(s)	68, 123, 229, 693, 931, 1036, 1189, 1816
BstMAI	GTCTC	6 cut(s)	299, 839, 1422, 1444, 1657, 1707
BstMWI	GCNNNNNNNGC	5 cut(s)	763, 815, 1495, 1605, 1644
BstNI	CCWGG	5 cut(s)	394, 414, 900, 1566, 1610
BstNSI	RCATGY	2 cut(s)	737, 980
BstSCI	CCNGG	6 cut(s)	290, 392, 412, 898, 1564, 1608
BstSFI	CTRYAG	2 cut(s)	195, 981
BstV1I	GCAGC	2 cut(s)	670, 1276
BstV2I	GAAGAC	5 cut(s)	102, 174, 261, 462, 1654
BstX2I	RGATCY	3 cut(s)	242, 604, 1166
BstYI	RGATCY	3 cut(s)	242, 604, 1166
Bsu15I	ATCGAT	1 cut(s)	471
BsuI	GTATCC	1 cut(s)	208
BsuRI	GGCC	1 cut(s)	1070
BsuTUI	ATCGAT	1 cut(s)	471
BtsCI	GGATG	8 cut(s)	68, 123, 229, 693, 931, 1036, 1189, 1816
BtsI	GCAGTG	1 cut(s)	1009
BtsIMutI	CAGTG	1 cut(s)	1009
Cac8I	GCNNGC	2 cut(s)	931, 1068
CciI	TCATGA	5 cut(s)	556, 910, 1009, 1252, 1279
Cfr10I	RCCGGY	1 cut(s)	929
Cfr13I	GGNCC	2 cut(s)	390, 828
ClaI	ATCGAT	1 cut(s)	471
CseI	GACGC	1 cut(s)	1297
Csp6I	GTAC	4 cut(s)	354, 449, 522, 581
CspCI	CAANNNNNGTGG	2 cut(s)	1549, 1584
CviQI	GTAC	4 cut(s)	354, 449, 522, 581
DdeI	CTNAG	7 cut(s)	38, 89, 994, 1026, 1130, 1377, 1604
DrdI	GACNNNNNNGTC	2 cut(s)	313, 1436
DseDI	GACNNNNNNGTC	2 cut(s)	313, 1436
Ecl136II	GAGCTC	1 cut(s)	1599
Eco24I	GRGCYC	2 cut(s)	1500, 1601
Eco47I	GGWCC	2 cut(s)	390, 828
Eco53kI	GAGCTC	1 cut(s)	1599
Eco57I	CTGAAG	2 cut(s)	258, 1624
EcoICRI	GAGCTC	1 cut(s)	1599
EcoRII	CCWGG	5 cut(s)	392, 412, 898, 1564, 1608
EcoT22I	ATGCAT	1 cut(s)	870
EcoT38I	GRGCYC	2 cut(s)	1500, 1601
Esp3I	CGTCTC	2 cut(s)	1422, 1657
FalI	AAGNNNNNCTT	4 cut(s)	159, 191, 1224, 1256
FaqI	GGGAC	4 cut(s)	151, 403, 987, 1839
FauNDI	CATATG	2 cut(s)	864, 870
FbaI	TGATCA	7 cut(s)	802, 1006, 1012, 1249, 1255, 1345, 1387
Fnu4HI	GCNGC	2 cut(s)	659, 1290
FokI	GGATG	8 cut(s)	75, 130, 216, 700, 938, 1043, 1196, 1803
FriOI	GRGCYC	2 cut(s)	1500, 1601
Fsp4HI	GCNGC	2 cut(s)	659, 1290
FspBI	CTAG	4 cut(s)	284, 1635, 1691, 1724
GluI	GCNGC	2 cut(s)	659, 1290
GsaI	CCCAGC	1 cut(s)	612
GsuI	CTGGAG	1 cut(s)	938
HaeIII	GGCC	1 cut(s)	1070
HapII	CCGG	2 cut(s)	291, 930
HgaI	GACGC	1 cut(s)	1297
Hin1I	GRCGYC	1 cut(s)	1308
HincII	GTYRAC	1 cut(s)	1366
HindII	GTYRAC	1 cut(s)	1366
HindIII	AAGCTT	2 cut(s)	526, 1106
HinfI	GANTC	8 cut(s)	287, 553, 725, 947, 1351, 1457, 1528, 1715
HpaII	CCGG	2 cut(s)	291, 930
HphI	GGTGA	1 cut(s)	1817
Hpy166II	GTNNAC	4 cut(s)	538, 1331, 1366, 1688
Hpy8I	GTNNAC	4 cut(s)	538, 1331, 1366, 1688
HpyAV	CCTTC	5 cut(s)	212, 1092, 1277, 1672, 1867
HpyCH4III	ACNGT	5 cut(s)	350, 385, 1304, 1328, 1433
HpyF10VI	GCNNNNNNNGC	5 cut(s)	763, 815, 1495, 1605, 1644
HpyF3I	CTNAG	7 cut(s)	38, 89, 994, 1026, 1130, 1377, 1604
Hsp92I	GRCGYC	1 cut(s)	1308
KroI	GCCGGC	1 cut(s)	929
KroNI	GCCGGC	1 cut(s)	931
Ksp22I	TGATCA	7 cut(s)	802, 1006, 1012, 1249, 1255, 1345, 1387
LmnI	GCTCC	4 cut(s)	763, 919, 1402, 1495
Lsp1109I	GCAGC	2 cut(s)	670, 1276
LweI	GCATC	7 cut(s)	393, 916, 1012, 1024, 1174, 1634, 1784
MaeI	CTAG	4 cut(s)	284, 1635, 1691, 1724
MaeIII	GTNAC	5 cut(s)	222, 668, 1309, 1615, 1630
MflI	RGATCY	3 cut(s)	242, 604, 1166
MhlI	GDGCHC	4 cut(s)	768, 1500, 1560, 1601
MluCI	AATT	5 cut(s)	144, 423, 637, 712, 778
MlyI	GAGTC	2 cut(s)	941, 1709
MmeI	TCCRAC	3 cut(s)	139, 1140, 1342
Mph1103I	ATGCAT	1 cut(s)	870
MroNI	GCCGGC	1 cut(s)	929
MroXI	GAANNNNTTC	3 cut(s)	1266, 1532, 1547
MseI	TTAA	5 cut(s)	311, 335, 1110, 1371, 1745
MslI	CAYNNNNRTG	3 cut(s)	836, 1278, 1284
MspI	CCGG	2 cut(s)	291, 930
MspR9I	CCNGG	6 cut(s)	292, 394, 414, 900, 1566, 1610
MvaI	CCWGG	5 cut(s)	394, 414, 900, 1566, 1610
MwoI	GCNNNNNNNGC	5 cut(s)	763, 815, 1495, 1605, 1644
NaeI	GCCGGC	1 cut(s)	931
NciI	CCSGG	1 cut(s)	292
NdeI	CATATG	2 cut(s)	864, 870
NgoMIV	GCCGGC	1 cut(s)	929
NlaIV	GGNNCC	4 cut(s)	391, 606, 1497, 1739
NmuCI	GTSAC	2 cut(s)	668, 1309
NsiI	ATGCAT	1 cut(s)	870
NspI	RCATGY	2 cut(s)	737, 980
NspV	TTCGAA	1 cut(s)	785
PagI	TCATGA	5 cut(s)	556, 910, 1009, 1252, 1279
PdiI	GCCGGC	1 cut(s)	931
PdmI	GAANNNNTTC	3 cut(s)	1266, 1532, 1547
PfeI	GAWTC	6 cut(s)	287, 553, 725, 1351, 1457, 1528
PfoI	TCCNGGA	1 cut(s)	290
PkrI	GCNGC	2 cut(s)	660, 1291
PleI	GAGTC	2 cut(s)	941, 1709
PpsI	GAGTC	2 cut(s)	941, 1709
PsiI	TTATAA	2 cut(s)	705, 959
Psp124BI	GAGCTC	1 cut(s)	1601
Psp6I	CCWGG	5 cut(s)	392, 412, 898, 1564, 1608
PspFI	CCCAGC	1 cut(s)	608
PspGI	CCWGG	5 cut(s)	392, 412, 898, 1564, 1608
PspN4I	GGNNCC	4 cut(s)	391, 606, 1497, 1739
PspPI	GGNCC	2 cut(s)	390, 828
PstI	CTGCAG	1 cut(s)	199
PsuI	RGATCY	3 cut(s)	242, 604, 1166
RsaI	GTAC	4 cut(s)	355, 450, 523, 582
RsaNI	GTAC	4 cut(s)	354, 449, 522, 581
RseI	CAYNNNNRTG	3 cut(s)	836, 1278, 1284
SacI	GAGCTC	1 cut(s)	1601
SaqAI	TTAA	5 cut(s)	311, 335, 1110, 1371, 1745
SatI	GCNGC	2 cut(s)	659, 1290
Sau96I	GGNCC	2 cut(s)	390, 828
ScaI	AGTACT	2 cut(s)	450, 582
SchI	GAGTC	2 cut(s)	941, 1709
ScrFI	CCNGG	6 cut(s)	292, 394, 414, 900, 1566, 1610
SduI	GDGCHC	4 cut(s)	768, 1500, 1560, 1601
SfaNI	GCATC	7 cut(s)	393, 916, 1012, 1024, 1174, 1634, 1784
SfcI	CTRYAG	2 cut(s)	195, 981
SfuI	TTCGAA	1 cut(s)	785
SinI	GGWCC	2 cut(s)	390, 828
SmiMI	CAYNNNNRTG	3 cut(s)	836, 1278, 1284
SmlI	CTYRAG	1 cut(s)	150
SmoI	CTYRAG	1 cut(s)	150
SpeI	ACTAGT	1 cut(s)	1690
Sse9I	AATT	5 cut(s)	144, 423, 637, 712, 778
SspI	AATATT	2 cut(s)	955, 1150
SspMI	CTAG	4 cut(s)	284, 1635, 1691, 1724
SstI	GAGCTC	1 cut(s)	1601
StyD4I	CCNGG	6 cut(s)	290, 392, 412, 898, 1564, 1608
TaaI	ACNGT	5 cut(s)	350, 385, 1304, 1328, 1433
TaqI	TCGA	3 cut(s)	362, 471, 785
TasI	AATT	5 cut(s)	144, 423, 637, 712, 778
TatI	WGTACW	3 cut(s)	353, 448, 580
TfiI	GAWTC	6 cut(s)	287, 553, 725, 1351, 1457, 1528
Tru1I	TTAA	5 cut(s)	311, 335, 1110, 1371, 1745
Tru9I	TTAA	5 cut(s)	311, 335, 1110, 1371, 1745
TscAI	CASTG	1 cut(s)	1009
TseFI	GTSAC	2 cut(s)	668, 1309
TseI	GCWGC	2 cut(s)	658, 1289
Tsp45I	GTSAC	2 cut(s)	668, 1309
TspGWI	ACGGA	2 cut(s)	827, 1071
TspRI	CASTG	1 cut(s)	1009
VpaK11BI	GGWCC	2 cut(s)	390, 828
XceI	RCATGY	2 cut(s)	737, 980
XmnI	GAANNNNTTC	3 cut(s)	1266, 1532, 1547
XspI	CTAG	4 cut(s)	284, 1635, 1691, 1724
ZrmI	AGTACT	2 cut(s)	450, 582
Zsp2I	ATGCAT	1 cut(s)	870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.