Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Forward (+)

40792295 .. 40797237

Gene Structure 4943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG226300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGTATCAATCTATATCTATGCGTGTGACCTATTTTGGGGGTTACTTCAGGTTTGTTGAGTGGATGGATTGTTGCTGTTCGGGGACTGAAATTACTCAAGATGTTGGATATGAAGACCATCTTCTTTTTCCAGTAGTTTCTGCAGTCCTTCCTTGTAGGGATACCTTGTTACAGCATCCAAGAACCAGATCTTGTGATTTTCTTTCCAAAATGTCTTCTTCAGTTCCCCTAGATTCCGGGATTTATGCAGAGACTTTAATGTCAAACCAACCCAGTTGGTTAAACTTCTCTGACAGTAGTACATATTCGAGTACTAATGTAGAAGAAACTGTTGGGACCAGGGTTTTGATGCCAATACCAGGAGGACTAATTGAGCTTCTTGTTGCCAAACAAGTACTTGAAGACCAGAATGTTATCGATTTCATCACAGAGCAATACAACATCTCAATAGAACAGGATCATATTGGTACAAGCTTTGGGGTAAACTTGGACACAATGACTCATGATGAAATCCAATCAGAGCCAGTACTTTTAGACCACGAACAAATGGATCCCAGCAATCATGTTTTCTGCTCTGGCGATAATTCTGCCCTGAACTTCTTGCAGCAGTTTAGTCACAACTTGGGAAACAGGATGAAGAACATTAGTTATAATGTCAATTCTTTTGAAGATTCATCACATGCACCATTTCTTTCTGATAAGCAAATGGAGCACCCATTTACTAATTGTTCGAAAAAAACTGGGTTTGATCAAGCAACGGAGGCAATGCAAAGGTCCATGATGATGAGTGAGACACAAGCCACACACCATATGCATATGCAATATATGGATCAGTCATTAGAACCAGGCATGGATCATGAGCTGGAGCAGGATGCCGGCAATAATGATAAGGACTCAAATATTATAAATGATGATGGGGGACATGCTACAGATTTGAACTCAGATTGCAGTGATCATGATCAGCTTGATGCTGAGGATGGTGCAAAATATCGGAGGAGGAATGGAAAAGGGCAGGCCAAAAACCTTGTTGCAGAGAGAAAGAGAAGGAAGAAGCTTAATGACAGGCTCTATGAACTTAGGTCTTTAGTTCCCAATATTTCCAAGTTGGATAGAGCTTCTATTCTTGGGGATGCAATAGAGTATGTGATGGAGTTGCAGAACCAAGCTAAAATACTCCAAGATGAGCTTAATGATGATCATGATCACGAAGAAGTTCGCCATGTTCATGAAGGTGCTGCTAATAAGAACTGTGGCATCACTTTCCAACATAACAGTTTACAATCAGAGATTGATCAGAGTCAAAGTGGGGTTGACCTTAAAACTGAGCAAAATGATCATAAAGCTCCAAATGGGTTTCATTTGGGAACATCAGGAGACGGTAGTGTCTCAAAACAAAGCCCCGATTCAGAAGTTATCCACGATCACAAGACACAGCAGATGGAGCCCCAAGTGGAAGTAGCTCAAATAGATGGGAATCAGTTCTTTGTGAAAGTATTCTGTGAGCACAAGCCTGGTGGATTTGTGAGATTGATGGAGGCATTGAGCTCTCTGAGCCTGGAAGTTACTAATGCCAATGTAACTAGCTTCAGATGCCTTGTCTCTAATGTCTTCATCGTAGAGAAGAAGGATAGTGAACTAGTTGAAGCTGATGAAGTGAGAGACTCGTTGCTAGAGCTAACAAGGAACCCCTTAAAATGGCGTAGTGAGGAAATGGCGAAAGCATCAGAGATTGGGATTGGCTTGGATAACAACCACCACCATCATCCCCATCACCAAAACCTCCACAACCACCATTTCAGTCCCTTCCACTTGCACCATCTTCCTACTGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

611

Amino Acids

69.09

Weight (kDa)

5.07

Isoelectric Point (pI)

56.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	18 - 143	3.9e-11	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	343 - 386	1.8e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	483 - 557	5.3e-12	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	651, 905
AasI	GACNNNNNNGTC	2 cut(s)	259, 1382
AclWI	GGATC	5 cut(s)	465, 545, 558, 837, 861
AcuI	CTGAAG	3 cut(s)	31, 204, 1570
AfaI	GTAC	5 cut(s)	301, 313, 396, 469, 528
AfiI	CCNNNNNNNGG	3 cut(s)	36, 359, 1695
AgsI	TTSAA	4 cut(s)	401, 668, 937, 1643
AhlI	ACTAGT	1 cut(s)	1636
AjnI	CCWGG	5 cut(s)	338, 358, 844, 1510, 1554
AjuI	GAANNNNNNNTTGG	2 cut(s)	315, 347
Alw21I	GWGCWC	3 cut(s)	714, 1506, 1547
Alw26I	GTCTC	6 cut(s)	245, 785, 1368, 1390, 1603, 1653
AlwI	GGATC	5 cut(s)	465, 545, 558, 837, 861
AoxI	GGCC	1 cut(s)	1014
ApeKI	GCWGC	2 cut(s)	604, 1235
ArsI	GACNNNNNNTTYG	2 cut(s)	328, 360
Asp700I	GAANNNNTTC	3 cut(s)	1212, 1478, 1493
AspS9I	GGNCC	2 cut(s)	336, 774
AsuC2I	CCSGG	1 cut(s)	238
AsuHPI	GGTGA	1 cut(s)	1763
AsuII	TTCGAA	1 cut(s)	731
AvaII	GGWCC	2 cut(s)	336, 774
BamHI	GGATCC	1 cut(s)	550
BanII	GRGCYC	2 cut(s)	1446, 1547
BbsI	GAAGAC	4 cut(s)	120, 207, 408, 1600
Bbv12I	GWGCWC	3 cut(s)	714, 1506, 1547
BbvCI	CCTCAGC	1 cut(s)	972
BbvI	GCAGC	2 cut(s)	616, 1222
BcgI	CGANNNNNNTGC	2 cut(s)	569, 603
BciT130I	CCWGG	5 cut(s)	340, 360, 846, 1512, 1556
BciVI	GTATCC	1 cut(s)	154
BclI	TGATCA	7 cut(s)	748, 952, 958, 1195, 1201, 1291, 1333
BcnI	CCSGG	1 cut(s)	238
BcoDI	GTCTC	6 cut(s)	245, 785, 1368, 1390, 1603, 1653
BcuI	ACTAGT	1 cut(s)	1636
BfaI	CTAG	4 cut(s)	230, 1581, 1637, 1670
BfmI	CTRYAG	2 cut(s)	141, 927
BfuI	GTATCC	1 cut(s)	154
BglII	AGATCT	1 cut(s)	188
BisI	GCNGC	2 cut(s)	605, 1236
BlsI	GCNGC	2 cut(s)	606, 1237
BmcAI	AGTACT	3 cut(s)	313, 396, 528
Bme1390I	CCNGG	6 cut(s)	238, 340, 360, 846, 1512, 1556
Bme18I	GGWCC	2 cut(s)	336, 774
BmgT120I	GGNCC	2 cut(s)	336, 774
BmiI	GGNNCC	4 cut(s)	337, 552, 1443, 1685
BmrFI	CCNGG	6 cut(s)	238, 340, 360, 846, 1512, 1556
BmrI	ACTGGG	2 cut(s)	267, 750
BmsI	GCATC	8 cut(s)	184, 339, 862, 958, 1120, 1263, 1580, 1730
BmuI	ACTGGG	2 cut(s)	267, 750
BpiI	GAAGAC	4 cut(s)	120, 207, 408, 1600
BpmI	CTGGAG	1 cut(s)	884
Bpu10I	CCTNAGC	1 cut(s)	972
Bpu14I	TTCGAA	1 cut(s)	731
BpuEI	CTTGAG	1 cut(s)	81
BpuMI	CCSGG	1 cut(s)	238
Bsa29I	ATCGAT	1 cut(s)	417
BsaBI	GATNNNNATC	3 cut(s)	957, 1200, 1473
BsaJI	CCNNGG	1 cut(s)	339
Bsc4I	CCNNNNNNNGG	3 cut(s)	36, 359, 1695
Bse118I	RCCGGY	1 cut(s)	875
Bse1I	ACTGG	4 cut(s)	131, 273, 524, 745
Bse3DI	GCAATG	1 cut(s)	771
Bse8I	GATNNNNATC	3 cut(s)	957, 1200, 1473
BseBI	CCWGG	5 cut(s)	340, 360, 846, 1512, 1556
BseCI	ATCGAT	1 cut(s)	417
BseDI	CCNNGG	1 cut(s)	339
BseGI	GGATG	7 cut(s)	69, 175, 639, 877, 982, 1135, 1762
BseJI	GATNNNNATC	3 cut(s)	957, 1200, 1473
BseLI	CCNNNNNNNGG	3 cut(s)	36, 359, 1695
BseMI	GCAATG	1 cut(s)	771
BseMII	CTCAG	4 cut(s)	954, 963, 1314, 1541
BseNI	ACTGG	4 cut(s)	131, 273, 524, 745
BseRI	GAGGAG	1 cut(s)	1009
BseXI	GCAGC	2 cut(s)	616, 1222
BseYI	CCCAGC	1 cut(s)	554
BshFI	GGCC	1 cut(s)	1016
BshVI	ATCGAT	1 cut(s)	417
BsiHKAI	GWGCWC	3 cut(s)	714, 1506, 1547
BsiSI	CCGG	2 cut(s)	237, 876
BslFI	GGGAC	4 cut(s)	97, 349, 933, 1785
BslI	CCNNNNNNNGG	3 cut(s)	36, 359, 1695
BsmAI	GTCTC	6 cut(s)	245, 785, 1368, 1390, 1603, 1653
BsmBI	CGTCTC	1 cut(s)	1368
BsmFI	GGGAC	4 cut(s)	97, 349, 933, 1785
BsnI	GGCC	1 cut(s)	1016
Bsp119I	TTCGAA	1 cut(s)	731
Bsp1286I	GDGCHC	4 cut(s)	714, 1446, 1506, 1547
BspANI	GGCC	1 cut(s)	1016
BspCNI	CTCAG	4 cut(s)	953, 964, 1315, 1542
BspDI	ATCGAT	1 cut(s)	417
BspHI	TCATGA	5 cut(s)	502, 856, 955, 1198, 1225
BspLI	GGNNCC	4 cut(s)	337, 552, 1443, 1685
BspMAI	CTGCAG	1 cut(s)	145
BspPI	GGATC	5 cut(s)	465, 545, 558, 837, 861
BspT104I	TTCGAA	1 cut(s)	731
BsrDI	GCAATG	1 cut(s)	771
BsrFI	RCCGGY	1 cut(s)	875
BsrI	ACTGG	4 cut(s)	131, 273, 524, 745
BssAI	RCCGGY	1 cut(s)	875
BssECI	CCNNGG	1 cut(s)	339
Bst2UI	CCWGG	5 cut(s)	340, 360, 846, 1512, 1556
Bst4CI	ACNGT	5 cut(s)	296, 331, 1250, 1274, 1379
BstBI	TTCGAA	1 cut(s)	731
BstC8I	GCNNGC	2 cut(s)	877, 1014
BstDEI	CTNAG	5 cut(s)	940, 972, 1076, 1323, 1550
BstF5I	GGATG	7 cut(s)	69, 175, 639, 877, 982, 1135, 1762
BstMAI	GTCTC	6 cut(s)	245, 785, 1368, 1390, 1603, 1653
BstMWI	GCNNNNNNNGC	5 cut(s)	709, 761, 1441, 1551, 1590
BstNI	CCWGG	5 cut(s)	340, 360, 846, 1512, 1556
BstNSI	RCATGY	2 cut(s)	683, 926
BstSCI	CCNGG	6 cut(s)	236, 338, 358, 844, 1510, 1554
BstSFI	CTRYAG	2 cut(s)	141, 927
BstV1I	GCAGC	2 cut(s)	616, 1222
BstV2I	GAAGAC	4 cut(s)	120, 207, 408, 1600
BstX2I	RGATCY	2 cut(s)	188, 550
BstYI	RGATCY	2 cut(s)	188, 550
Bsu15I	ATCGAT	1 cut(s)	417
BsuI	GTATCC	1 cut(s)	154
BsuRI	GGCC	1 cut(s)	1016
BsuTUI	ATCGAT	1 cut(s)	417
BtsCI	GGATG	7 cut(s)	69, 175, 639, 877, 982, 1135, 1762
BtsI	GCAGTG	1 cut(s)	955
BtsIMutI	CAGTG	1 cut(s)	955
Cac8I	GCNNGC	2 cut(s)	877, 1014
CciI	TCATGA	5 cut(s)	502, 856, 955, 1198, 1225
Cfr10I	RCCGGY	1 cut(s)	875
Cfr13I	GGNCC	2 cut(s)	336, 774
ClaI	ATCGAT	1 cut(s)	417
Csp6I	GTAC	5 cut(s)	300, 312, 395, 468, 527
CspCI	CAANNNNNGTGG	2 cut(s)	1495, 1530
CviQI	GTAC	5 cut(s)	300, 312, 395, 468, 527
DdeI	CTNAG	5 cut(s)	940, 972, 1076, 1323, 1550
DrdI	GACNNNNNNGTC	2 cut(s)	259, 1382
DseDI	GACNNNNNNGTC	2 cut(s)	259, 1382
Ecl136II	GAGCTC	1 cut(s)	1545
Eco24I	GRGCYC	2 cut(s)	1446, 1547
Eco47I	GGWCC	2 cut(s)	336, 774
Eco53kI	GAGCTC	1 cut(s)	1545
Eco57I	CTGAAG	3 cut(s)	31, 204, 1570
EcoICRI	GAGCTC	1 cut(s)	1545
EcoRII	CCWGG	5 cut(s)	338, 358, 844, 1510, 1554
EcoT22I	ATGCAT	1 cut(s)	816
EcoT38I	GRGCYC	2 cut(s)	1446, 1547
Esp3I	CGTCTC	1 cut(s)	1368
FalI	AAGNNNNNCTT	4 cut(s)	105, 137, 1170, 1202
FaqI	GGGAC	4 cut(s)	97, 349, 933, 1785
FauNDI	CATATG	2 cut(s)	810, 816
FbaI	TGATCA	7 cut(s)	748, 952, 958, 1195, 1201, 1291, 1333
Fnu4HI	GCNGC	2 cut(s)	605, 1236
FokI	GGATG	7 cut(s)	76, 162, 646, 884, 989, 1142, 1749
FriOI	GRGCYC	2 cut(s)	1446, 1547
Fsp4HI	GCNGC	2 cut(s)	605, 1236
FspBI	CTAG	4 cut(s)	230, 1581, 1637, 1670
GluI	GCNGC	2 cut(s)	605, 1236
GsaI	CCCAGC	1 cut(s)	558
GsuI	CTGGAG	1 cut(s)	884
HaeIII	GGCC	1 cut(s)	1016
HapII	CCGG	2 cut(s)	237, 876
HincII	GTYRAC	1 cut(s)	1312
HindII	GTYRAC	1 cut(s)	1312
HindIII	AAGCTT	2 cut(s)	472, 1052
HinfI	GANTC	8 cut(s)	233, 499, 671, 893, 1297, 1403, 1474, 1661
HpaII	CCGG	2 cut(s)	237, 876
HphI	GGTGA	1 cut(s)	1763
Hpy166II	GTNNAC	4 cut(s)	484, 1277, 1312, 1634
Hpy188III	TCNNGA	8 cut(s)	98, 503, 857, 956, 1199, 1205, 1226, 1371
Hpy8I	GTNNAC	4 cut(s)	484, 1277, 1312, 1634
HpyAV	CCTTC	5 cut(s)	158, 1038, 1223, 1618, 1813
HpyCH4III	ACNGT	5 cut(s)	296, 331, 1250, 1274, 1379
HpyF10VI	GCNNNNNNNGC	5 cut(s)	709, 761, 1441, 1551, 1590
HpyF3I	CTNAG	5 cut(s)	940, 972, 1076, 1323, 1550
KroI	GCCGGC	1 cut(s)	875
KroNI	GCCGGC	1 cut(s)	877
Ksp22I	TGATCA	7 cut(s)	748, 952, 958, 1195, 1201, 1291, 1333
LmnI	GCTCC	4 cut(s)	709, 865, 1348, 1441
Lsp1109I	GCAGC	2 cut(s)	616, 1222
LweI	GCATC	8 cut(s)	184, 339, 862, 958, 1120, 1263, 1580, 1730
MaeI	CTAG	4 cut(s)	230, 1581, 1637, 1670
MaeIII	GTNAC	6 cut(s)	25, 41, 168, 614, 1561, 1576
MflI	RGATCY	2 cut(s)	188, 550
MhlI	GDGCHC	4 cut(s)	714, 1446, 1506, 1547
MluCI	AATT	5 cut(s)	90, 369, 583, 658, 724
MlyI	GAGTC	4 cut(s)	493, 887, 1306, 1655
MmeI	TCCRAC	3 cut(s)	85, 1086, 1288
MnlI	CCTC	8 cut(s)	356, 754, 967, 987, 990, 1528, 1699, 1790
Mph1103I	ATGCAT	1 cut(s)	816
MroNI	GCCGGC	1 cut(s)	875
MroXI	GAANNNNTTC	3 cut(s)	1212, 1478, 1493
MseI	TTAA	6 cut(s)	257, 281, 1056, 1188, 1317, 1691
MslI	CAYNNNNRTG	3 cut(s)	782, 1224, 1230
MspI	CCGG	2 cut(s)	237, 876
MspR9I	CCNGG	6 cut(s)	238, 340, 360, 846, 1512, 1556
MvaI	CCWGG	5 cut(s)	340, 360, 846, 1512, 1556
MwoI	GCNNNNNNNGC	5 cut(s)	709, 761, 1441, 1551, 1590
NaeI	GCCGGC	1 cut(s)	877
NciI	CCSGG	1 cut(s)	238
NdeI	CATATG	2 cut(s)	810, 816
NgoMIV	GCCGGC	1 cut(s)	875
NlaIV	GGNNCC	4 cut(s)	337, 552, 1443, 1685
NmuCI	GTSAC	2 cut(s)	25, 614
NsiI	ATGCAT	1 cut(s)	816
NspI	RCATGY	2 cut(s)	683, 926
NspV	TTCGAA	1 cut(s)	731
PagI	TCATGA	5 cut(s)	502, 856, 955, 1198, 1225
PdiI	GCCGGC	1 cut(s)	877
PdmI	GAANNNNTTC	3 cut(s)	1212, 1478, 1493
PfeI	GAWTC	4 cut(s)	233, 671, 1403, 1474
PfoI	TCCNGGA	1 cut(s)	236
PkrI	GCNGC	2 cut(s)	606, 1237
PleI	GAGTC	4 cut(s)	493, 887, 1305, 1655
PpsI	GAGTC	4 cut(s)	493, 887, 1305, 1655
PsiI	TTATAA	2 cut(s)	651, 905
Psp124BI	GAGCTC	1 cut(s)	1547
Psp6I	CCWGG	5 cut(s)	338, 358, 844, 1510, 1554
PspFI	CCCAGC	1 cut(s)	554
PspGI	CCWGG	5 cut(s)	338, 358, 844, 1510, 1554
PspN4I	GGNNCC	4 cut(s)	337, 552, 1443, 1685
PspPI	GGNCC	2 cut(s)	336, 774
PstI	CTGCAG	1 cut(s)	145
PsuI	RGATCY	2 cut(s)	188, 550
RsaI	GTAC	5 cut(s)	301, 313, 396, 469, 528
RsaNI	GTAC	5 cut(s)	300, 312, 395, 468, 527
RseI	CAYNNNNRTG	3 cut(s)	782, 1224, 1230
SacI	GAGCTC	1 cut(s)	1547
SaqAI	TTAA	6 cut(s)	257, 281, 1056, 1188, 1317, 1691
SatI	GCNGC	2 cut(s)	605, 1236
Sau96I	GGNCC	2 cut(s)	336, 774
ScaI	AGTACT	3 cut(s)	313, 396, 528
SchI	GAGTC	4 cut(s)	493, 887, 1306, 1655
ScrFI	CCNGG	6 cut(s)	238, 340, 360, 846, 1512, 1556
SduI	GDGCHC	4 cut(s)	714, 1446, 1506, 1547
SfaNI	GCATC	8 cut(s)	184, 339, 862, 958, 1120, 1263, 1580, 1730
SfcI	CTRYAG	2 cut(s)	141, 927
SfuI	TTCGAA	1 cut(s)	731
SinI	GGWCC	2 cut(s)	336, 774
SmiMI	CAYNNNNRTG	3 cut(s)	782, 1224, 1230
SmlI	CTYRAG	1 cut(s)	96
SmoI	CTYRAG	1 cut(s)	96
SpeI	ACTAGT	1 cut(s)	1636
Sse9I	AATT	5 cut(s)	90, 369, 583, 658, 724
SspI	AATATT	2 cut(s)	901, 1096
SspMI	CTAG	4 cut(s)	230, 1581, 1637, 1670
SstI	GAGCTC	1 cut(s)	1547
StyD4I	CCNGG	6 cut(s)	236, 338, 358, 844, 1510, 1554
TaaI	ACNGT	5 cut(s)	296, 331, 1250, 1274, 1379
TaqI	TCGA	3 cut(s)	308, 417, 731
TasI	AATT	5 cut(s)	90, 369, 583, 658, 724
TatI	WGTACW	4 cut(s)	299, 311, 394, 526
TfiI	GAWTC	4 cut(s)	233, 671, 1403, 1474
Tru1I	TTAA	6 cut(s)	257, 281, 1056, 1188, 1317, 1691
Tru9I	TTAA	6 cut(s)	257, 281, 1056, 1188, 1317, 1691
TscAI	CASTG	1 cut(s)	955
TseFI	GTSAC	2 cut(s)	25, 614
TseI	GCWGC	2 cut(s)	604, 1235
Tsp45I	GTSAC	2 cut(s)	25, 614
TspGWI	ACGGA	1 cut(s)	773
TspRI	CASTG	1 cut(s)	955
VpaK11BI	GGWCC	2 cut(s)	336, 774
XceI	RCATGY	2 cut(s)	683, 926
XmnI	GAANNNNTTC	3 cut(s)	1212, 1478, 1493
XspI	CTAG	4 cut(s)	230, 1581, 1637, 1670
ZrmI	AGTACT	3 cut(s)	313, 396, 528
Zsp2I	ATGCAT	1 cut(s)	816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.