Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Forward (+)

15318615 .. 15321847

Gene Structure 3233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g11750.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGATGATCATGCCATACCTCATCCACAGGCTTAGATCTCTTGTGGGTTTGAAGGGCTGGGACTGTTGTGTTCTCTGGAAACTAAGTGAAGACCAAAGGTTCATTGAGTTGATTGATTGTTGCTGTGCTGGGACTGAGATCTCCCAAGGTGATGCTGGACAAAATCTTCCTTTCCCTCCAGTGCTTGCTTGTAGGGATACAATCTTACAGCATCCAAGAACCACATCTTGTGATGTTCTAGCCCAAATACCTTCTTCCATGCCCCTAGACTCCGGGATTTATGCAGAGACCTTGATTTCAAACCAAACCAGTTGGTTAAACTTCTCTACCAACACATTTTTAAGTACTTTAGAGGTTTGTACCACTAGCTCCCTTTCTCCTATTTCCAGAAGGCACAGCCCTTTTGATATCGAGCTCATACTTTTCTTGATTACACTTGCAGGAAACTATTGGGACCAGGGTTGTGATTCCAATACCGGGGGGAATAATCGAGCTTCTTGTTACCAAACAAGTAATGTATTTGAAGATCAGCATGTTATTGATTTTGTCGCAGCCCAATACAACATCTCACTAGAGGAGGAGGCCCTGACTAACATAACCGGTACGCGCAAAATGAATGAAGTCGGATCAAAGCGATTTTTAGACCATCTTTCATTCAAAACTACTTCAGAGAATTTGAATCTGCATCCATATGATGTATCCATGGAGAGAACAAGCAATTCTCCAATGAACTTCTCGCAGCAATTTACTAATTACAACTCGAGAAACCTAACCAAGAATAATATTGATATTTCTTCAGCAGAAAATGGGTTTCAAGAGATGGAAGCGATGCAGAGGTCTATCACAAGTGAGAGACAACAGCACATGGATATGCAACAATATATGGAGGCATTAGTACCAAACATTGATCAGCAAGAGGGTAACGAGAAGCGGGACTCGAATACACATGAGGCAGAAGGACAAGCTGGGGATTTTATGTCGGATTGCAGCGATCAGATTGATGAGGATGAGGATACAAAATATCAAAGGAGGACAGGGAAACGGCCTCAAGCCAAAAACCTTATTGCTGAGAGAAGGAGAAGGAAGAAGCTTAATGACAGACTTTATGCTCTTAGGTCTTTGGTTCCCATTATTTCTAAGTTGGACAGGGCCTCCATTCTTGGGGATGCAATTGAATATGTGAAGCAGCTGCAGAAGCAAGCTAAACAGCTCCAAGATGAGCTTGATGATCATGCAGAGGATGATGCTGCTACGAACAATGTCAAATCAGAAATTCAGAGCCGAAGTGGAGTTAATCACATTAGGCCTAAAACAGATGATCATCAAGATGATCATAAAGCTTCAAATGGTTCTCATTTTGGAACACCGGGAGACTGCAGCGTCTCGAAACAAAGCAGAGATTATTCATATACTGTCCATGATCACAAGACAGAACAAATGGAGCCCCAAGTGGAAGTGGCTCAATTGGATGGAAACCAGTTCTTTGTGAAAGTGTTCTGTGAGCAAAAGCCTGGTGGATTTGTGAGGTTGATGGAGGCTTTGAGTTCACTGAGCCTGGAAGTTACTAATGCAAATGTGACTACCTTCAGATGCCTTGTGTCCAATGTTTTCATTGTAGAGAAAAAGGATACTGATATGGTTGAAGCTGATGATGTGAGGGACTCCTTGCTAGAGCTAACAAGGAATCCGTCAAGACCGCGCAGCGAGACAGCTAAAGCGGTGGAAAATGGGGTTGGCTTGGACAACCATCATGACCACCACCACCAACACCTCCACAACCACCATTTTAGTCCCCTCCACTTGCACCATCTTCCTAATGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

609

Amino Acids

68.98

Weight (kDa)

5.38

Isoelectric Point (pI)

55.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1379
AccII	CGCG	2 cut(s)	607, 1699
AciI	CCGC	3 cut(s)	931, 1697, 1718
AclWI	GGATC	1 cut(s)	634
AcsI	RAATTY	2 cut(s)	673, 1272
AcuI	CTGAAG	3 cut(s)	651, 780, 1570
AfaI	GTAC	4 cut(s)	346, 361, 604, 897
AfiI	CCNNNNNNNGG	2 cut(s)	477, 1161
AgeI	ACCGGT	1 cut(s)	599
AgsI	TTSAA	9 cut(s)	52, 300, 524, 658, 679, 815, 1175, 1344, 1643
AjnI	CCWGG	3 cut(s)	456, 1510, 1554
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
Alw21I	GWGCWC	1 cut(s)	417
Alw26I	GTCTC	5 cut(s)	281, 847, 1365, 1387, 1700
AlwI	GGATC	1 cut(s)	634
Ama87I	CYCGRG	1 cut(s)	760
AoxI	GGCC	4 cut(s)	582, 1043, 1149, 1304
ApeKI	GCWGC	8 cut(s)	551, 739, 987, 1186, 1189, 1247, 1377, 1701
ApoI	RAATTY	2 cut(s)	673, 1272
AsiGI	ACCGGT	1 cut(s)	599
Asp700I	GAANNNNTTC	1 cut(s)	1493
AspLEI	GCGC	2 cut(s)	609, 1701
AspS9I	GGNCC	3 cut(s)	454, 583, 1149
AsuC2I	CCSGG	3 cut(s)	274, 478, 1368
AsuHPI	GGTGA	1 cut(s)	161
AvaI	CYCGRG	1 cut(s)	760
AvaII	GGWCC	1 cut(s)	454
BanII	GRGCYC	2 cut(s)	417, 1446
BbsI	GAAGAC	1 cut(s)	96
Bbv12I	GWGCWC	1 cut(s)	417
BbvI	GCAGC	8 cut(s)	563, 751, 999, 1176, 1198, 1234, 1389, 1713
BccI	CCATC	6 cut(s)	654, 814, 1463, 1525, 1755, 1815
BceAI	ACGGC	1 cut(s)	1058
BciT130I	CCWGG	3 cut(s)	458, 1512, 1556
BciVI	GTATCC	4 cut(s)	190, 709, 1006, 1621
BclI	TGATCA	6 cut(s)	6, 907, 1228, 1318, 1330, 1420
BcnI	CCSGG	3 cut(s)	274, 478, 1368
BcoDI	GTCTC	5 cut(s)	281, 847, 1365, 1387, 1700
BfaI	CTAG	5 cut(s)	239, 266, 366, 572, 1670
BfmI	CTRYAG	2 cut(s)	1190, 1375
BfuI	GTATCC	4 cut(s)	190, 709, 1006, 1621
BglII	AGATCT	2 cut(s)	35, 138
BisI	GCNGC	8 cut(s)	552, 740, 988, 1187, 1190, 1248, 1378, 1702
BlsI	GCNGC	8 cut(s)	553, 741, 989, 1188, 1191, 1249, 1379, 1703
BmcAI	AGTACT	1 cut(s)	346
Bme1390I	CCNGG	6 cut(s)	274, 458, 478, 1368, 1512, 1556
Bme18I	GGWCC	1 cut(s)	454
BmeT110I	CYCGRG	1 cut(s)	760
BmgT120I	GGNCC	3 cut(s)	454, 583, 1149
BmiI	GGNNCC	3 cut(s)	455, 1125, 1443
BmrFI	CCNGG	6 cut(s)	274, 458, 478, 1368, 1512, 1556
BmsI	GCATC	7 cut(s)	142, 220, 694, 819, 1156, 1234, 1580
BpiI	GAAGAC	1 cut(s)	96
BpmI	CTGGAG	1 cut(s)	162
BpuEI	CTTGAG	1 cut(s)	1032
BpuMI	CCSGG	3 cut(s)	274, 478, 1368
BsaBI	GATNNNNATC	1 cut(s)	1320
BsaI	GGTCTC	1 cut(s)	281
BsaJI	CCNNGG	4 cut(s)	145, 457, 477, 702
BsaWI	WCCGGW	1 cut(s)	599
BsaXI	ACNNNNNCTCC	2 cut(s)	1136, 1166
Bsc4I	CCNNNNNNNGG	2 cut(s)	477, 1161
Bse118I	RCCGGY	1 cut(s)	599
Bse1I	ACTGG	3 cut(s)	179, 309, 1477
Bse8I	GATNNNNATC	1 cut(s)	1320
BseBI	CCWGG	3 cut(s)	458, 1512, 1556
BseDI	CCNNGG	4 cut(s)	145, 457, 477, 702
BseGI	GGATG	7 cut(s)	21, 211, 685, 1012, 1171, 1246, 1474
BseJI	GATNNNNATC	1 cut(s)	1320
BseLI	CCNNNNNNNGG	2 cut(s)	477, 1161
BseMII	CTCAG	3 cut(s)	126, 1059, 1541
BseNI	ACTGG	3 cut(s)	179, 309, 1477
BseRI	GAGGAG	2 cut(s)	590, 593
BseXI	GCAGC	8 cut(s)	563, 751, 999, 1176, 1198, 1234, 1389, 1713
BseYI	CCCAGC	3 cut(s)	57, 128, 965
Bsh1236I	CGCG	2 cut(s)	607, 1699
BshFI	GGCC	4 cut(s)	584, 1045, 1151, 1306
BshTI	ACCGGT	1 cut(s)	599
BsiHKAI	GWGCWC	1 cut(s)	417
BsiHKCI	CYCGRG	1 cut(s)	760
BsiSI	CCGG	4 cut(s)	273, 477, 600, 1367
BslFI	GGGAC	6 cut(s)	74, 145, 467, 947, 1673, 1776
BslI	CCNNNNNNNGG	2 cut(s)	477, 1161
BsmAI	GTCTC	5 cut(s)	281, 847, 1365, 1387, 1700
BsmBI	CGTCTC	1 cut(s)	1387
BsmFI	GGGAC	6 cut(s)	74, 145, 467, 947, 1673, 1776
BsnI	GGCC	4 cut(s)	584, 1045, 1151, 1306
Bso31I	GGTCTC	1 cut(s)	281
BsoBI	CYCGRG	1 cut(s)	760
Bsp1286I	GDGCHC	2 cut(s)	417, 1446
Bsp19I	CCATGG	1 cut(s)	702
BspACI	CCGC	3 cut(s)	931, 1697, 1718
BspANI	GGCC	4 cut(s)	584, 1045, 1151, 1306
BspCNI	CTCAG	3 cut(s)	127, 1060, 1542
BspFNI	CGCG	2 cut(s)	607, 1699
BspHI	TCATGA	1 cut(s)	1750
BspLI	GGNNCC	3 cut(s)	455, 1125, 1443
BspMAI	CTGCAG	2 cut(s)	1194, 1379
BspPI	GGATC	1 cut(s)	634
BspTNI	GGTCTC	1 cut(s)	281
BsrFI	RCCGGY	1 cut(s)	599
BsrI	ACTGG	3 cut(s)	179, 309, 1477
BssAI	RCCGGY	1 cut(s)	599
BssECI	CCNNGG	4 cut(s)	145, 457, 477, 702
BssT1I	CCWWGG	2 cut(s)	145, 702
Bst2UI	CCWGG	3 cut(s)	458, 1512, 1556
Bst4CI	ACNGT	2 cut(s)	65, 1414
BstC8I	GCNNGC	2 cut(s)	186, 1200
BstDEI	CTNAG	7 cut(s)	32, 83, 135, 1068, 1112, 1137, 1550
BstDSI	CCRYGG	1 cut(s)	702
BstF5I	GGATG	7 cut(s)	21, 211, 685, 1012, 1171, 1246, 1474
BstFNI	CGCG	2 cut(s)	607, 1699
BstHHI	GCGC	2 cut(s)	609, 1701
BstMAI	GTCTC	5 cut(s)	281, 847, 1365, 1387, 1700
BstMWI	GCNNNNNNNGC	1 cut(s)	1195
BstNI	CCWGG	3 cut(s)	458, 1512, 1556
BstNSI	RCATGY	1 cut(s)	536
BstSCI	CCNGG	6 cut(s)	272, 456, 476, 1366, 1510, 1554
BstSFI	CTRYAG	2 cut(s)	1190, 1375
BstUI	CGCG	2 cut(s)	607, 1699
BstV1I	GCAGC	8 cut(s)	563, 751, 999, 1176, 1198, 1234, 1389, 1713
BstV2I	GAAGAC	1 cut(s)	96
BstX2I	RGATCY	2 cut(s)	35, 138
BstYI	RGATCY	2 cut(s)	35, 138
BsuI	GTATCC	4 cut(s)	190, 709, 1006, 1621
BsuRI	GGCC	4 cut(s)	584, 1045, 1151, 1306
BtgI	CCRYGG	1 cut(s)	702
BtgZI	GCGATG	1 cut(s)	842
BtsCI	GGATG	7 cut(s)	21, 211, 685, 1012, 1171, 1246, 1474
BtsIMutI	CAGTG	2 cut(s)	186, 1547
Cac8I	GCNNGC	2 cut(s)	186, 1200
CciI	TCATGA	1 cut(s)	1750
CfoI	GCGC	2 cut(s)	609, 1701
Cfr10I	RCCGGY	1 cut(s)	599
Cfr13I	GGNCC	3 cut(s)	454, 583, 1149
CseI	GACGC	1 cut(s)	1369
Csp6I	GTAC	4 cut(s)	345, 360, 603, 896
CspAI	ACCGGT	1 cut(s)	599
CviAII	CATG	9 cut(s)	10, 259, 533, 703, 865, 947, 1232, 1418, 1751
CviQI	GTAC	4 cut(s)	345, 360, 603, 896
DdeI	CTNAG	7 cut(s)	32, 83, 135, 1068, 1112, 1137, 1550
DrdI	GACNNNNNNGTC	1 cut(s)	1379
DseDI	GACNNNNNNGTC	1 cut(s)	1379
Ecl136II	GAGCTC	1 cut(s)	415
Eco130I	CCWWGG	2 cut(s)	145, 702
Eco147I	AGGCCT	1 cut(s)	1306
Eco24I	GRGCYC	2 cut(s)	417, 1446
Eco31I	GGTCTC	1 cut(s)	281
Eco32I	GATATC	1 cut(s)	409
Eco47I	GGWCC	1 cut(s)	454
Eco53kI	GAGCTC	1 cut(s)	415
Eco57I	CTGAAG	3 cut(s)	651, 780, 1570
Eco88I	CYCGRG	1 cut(s)	760
EcoICRI	GAGCTC	1 cut(s)	415
EcoO109I	RGGNCCY	2 cut(s)	583, 1149
EcoRII	CCWGG	3 cut(s)	456, 1510, 1554
EcoRV	GATATC	1 cut(s)	409
EcoT14I	CCWWGG	2 cut(s)	145, 702
EcoT38I	GRGCYC	2 cut(s)	417, 1446
ErhI	CCWWGG	2 cut(s)	145, 702
Esp3I	CGTCTC	1 cut(s)	1387
FaeI	CATG	9 cut(s)	13, 262, 536, 706, 868, 950, 1235, 1421, 1754
FalI	AAGNNNNNCTT	2 cut(s)	1206, 1238
FaqI	GGGAC	6 cut(s)	74, 145, 467, 947, 1673, 1776
FatI	CATG	9 cut(s)	9, 258, 532, 702, 864, 946, 1231, 1417, 1750
FauI	CCCGC	1 cut(s)	924
FauNDI	CATATG	1 cut(s)	691
FbaI	TGATCA	6 cut(s)	6, 907, 1228, 1318, 1330, 1420
Fnu4HI	GCNGC	8 cut(s)	552, 740, 988, 1187, 1190, 1248, 1378, 1702
FokI	GGATG	7 cut(s)	8, 198, 672, 1019, 1178, 1253, 1481
FriOI	GRGCYC	2 cut(s)	417, 1446
Fsp4HI	GCNGC	8 cut(s)	552, 740, 988, 1187, 1190, 1248, 1378, 1702
FspBI	CTAG	5 cut(s)	239, 266, 366, 572, 1670
GlaI	GCGC	2 cut(s)	608, 1700
GluI	GCNGC	8 cut(s)	552, 740, 988, 1187, 1190, 1248, 1378, 1702
GsaI	CCCAGC	3 cut(s)	61, 132, 969
GsuI	CTGGAG	1 cut(s)	162
HaeIII	GGCC	4 cut(s)	584, 1045, 1151, 1306
HapII	CCGG	4 cut(s)	273, 477, 600, 1367
HgaI	GACGC	1 cut(s)	1369
HhaI	GCGC	2 cut(s)	609, 1701
Hin1II	CATG	9 cut(s)	13, 262, 536, 706, 868, 950, 1235, 1421, 1754
Hin6I	GCGC	2 cut(s)	607, 1699
HinP1I	GCGC	2 cut(s)	607, 1699
HindIII	AAGCTT	2 cut(s)	1088, 1338
HinfI	GANTC	6 cut(s)	269, 467, 679, 935, 1661, 1684
HpaII	CCGG	4 cut(s)	273, 477, 600, 1367
HphI	GGTGA	1 cut(s)	161
Hpy166II	GTNNAC	1 cut(s)	1547
Hpy188I	TCNGA	7 cut(s)	626, 670, 982, 996, 1270, 1278, 1589
Hpy188III	TCNNGA	9 cut(s)	76, 387, 427, 762, 815, 1325, 1384, 1692, 1751
Hpy8I	GTNNAC	1 cut(s)	1547
HpyAV	CCTTC	7 cut(s)	46, 261, 384, 950, 1068, 1074, 1594
HpyCH4III	ACNGT	2 cut(s)	65, 1414
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1195
HpyF3I	CTNAG	7 cut(s)	32, 83, 135, 1068, 1112, 1137, 1550
Hsp92II	CATG	9 cut(s)	13, 262, 536, 706, 868, 950, 1235, 1421, 1754
HspAI	GCGC	2 cut(s)	607, 1699
Ksp22I	TGATCA	6 cut(s)	6, 907, 1228, 1318, 1330, 1420
LmnI	GCTCC	3 cut(s)	374, 1215, 1441
Lsp1109I	GCAGC	8 cut(s)	563, 751, 999, 1176, 1198, 1234, 1389, 1713
LweI	GCATC	7 cut(s)	142, 220, 694, 819, 1156, 1234, 1580
MaeI	CTAG	5 cut(s)	239, 266, 366, 572, 1670
MaeIII	GTNAC	4 cut(s)	500, 920, 1561, 1576
MboII	GAAGA	7 cut(s)	101, 158, 246, 536, 786, 1096, 1802
MfeI	CAATTG	2 cut(s)	1170, 1463
MflI	RGATCY	2 cut(s)	35, 138
MhlI	GDGCHC	2 cut(s)	417, 1446
MluCI	AATT	7 cut(s)	673, 718, 743, 751, 1170, 1272, 1463
MlyI	GAGTC	3 cut(s)	263, 929, 1655
MmeI	TCCRAC	3 cut(s)	604, 960, 1122
MroXI	GAANNNNTTC	1 cut(s)	1493
MseI	TTAA	4 cut(s)	317, 341, 1092, 1293
MslI	CAYNNNNRTG	3 cut(s)	690, 869, 1326
MspA1I	CMGCKG	1 cut(s)	1189
MspI	CCGG	4 cut(s)	273, 477, 600, 1367
MspR9I	CCNGG	6 cut(s)	274, 458, 478, 1368, 1512, 1556
MunI	CAATTG	2 cut(s)	1170, 1463
MvaI	CCWGG	3 cut(s)	458, 1512, 1556
MvnI	CGCG	2 cut(s)	607, 1699
MwoI	GCNNNNNNNGC	1 cut(s)	1195
NciI	CCSGG	3 cut(s)	274, 478, 1368
NcoI	CCATGG	1 cut(s)	702
NdeI	CATATG	1 cut(s)	691
NlaIII	CATG	9 cut(s)	13, 262, 536, 706, 868, 950, 1235, 1421, 1754
NlaIV	GGNNCC	3 cut(s)	455, 1125, 1443
NmuCI	GTSAC	1 cut(s)	1576
NspI	RCATGY	1 cut(s)	536
PaeR7I	CTCGAG	1 cut(s)	760
PagI	TCATGA	1 cut(s)	1750
PceI	AGGCCT	1 cut(s)	1306
PdmI	GAANNNNTTC	1 cut(s)	1493
PfeI	GAWTC	3 cut(s)	467, 679, 1684
PfoI	TCCNGGA	1 cut(s)	272
PinAI	ACCGGT	1 cut(s)	599
PkrI	GCNGC	8 cut(s)	553, 741, 989, 1188, 1191, 1249, 1379, 1703
PleI	GAGTC	3 cut(s)	263, 929, 1655
PpsI	GAGTC	3 cut(s)	263, 929, 1655
Psp124BI	GAGCTC	1 cut(s)	417
Psp6I	CCWGG	3 cut(s)	456, 1510, 1554
PspFI	CCCAGC	3 cut(s)	57, 128, 965
PspGI	CCWGG	3 cut(s)	456, 1510, 1554
PspN4I	GGNNCC	3 cut(s)	455, 1125, 1443
PspPI	GGNCC	3 cut(s)	454, 583, 1149
PstI	CTGCAG	2 cut(s)	1194, 1379
PsuI	RGATCY	2 cut(s)	35, 138
PvuII	CAGCTG	1 cut(s)	1189
RsaI	GTAC	4 cut(s)	346, 361, 604, 897
RsaNI	GTAC	4 cut(s)	345, 360, 603, 896
RseI	CAYNNNNRTG	3 cut(s)	690, 869, 1326
SacI	GAGCTC	1 cut(s)	417
SaqAI	TTAA	4 cut(s)	317, 341, 1092, 1293
SatI	GCNGC	8 cut(s)	552, 740, 988, 1187, 1190, 1248, 1378, 1702
Sau96I	GGNCC	3 cut(s)	454, 583, 1149
ScaI	AGTACT	1 cut(s)	346
SchI	GAGTC	3 cut(s)	263, 929, 1655
ScrFI	CCNGG	6 cut(s)	274, 458, 478, 1368, 1512, 1556
SduI	GDGCHC	2 cut(s)	417, 1446
SfaNI	GCATC	7 cut(s)	142, 220, 694, 819, 1156, 1234, 1580
SfcI	CTRYAG	2 cut(s)	1190, 1375
Sfr274I	CTCGAG	1 cut(s)	760
SinI	GGWCC	1 cut(s)	454
SlaI	CTCGAG	1 cut(s)	760
SmiMI	CAYNNNNRTG	3 cut(s)	690, 869, 1326
SmlI	CTYRAG	2 cut(s)	760, 1047
SmoI	CTYRAG	2 cut(s)	760, 1047
Sse9I	AATT	7 cut(s)	673, 718, 743, 751, 1170, 1272, 1463
SseBI	AGGCCT	1 cut(s)	1306
SsiI	CCGC	3 cut(s)	931, 1697, 1718
SspI	AATATT	1 cut(s)	784
SspMI	CTAG	5 cut(s)	239, 266, 366, 572, 1670
SstI	GAGCTC	1 cut(s)	417
StuI	AGGCCT	1 cut(s)	1306
StyD4I	CCNGG	6 cut(s)	272, 456, 476, 1366, 1510, 1554
StyI	CCWWGG	2 cut(s)	145, 702
TaaI	ACNGT	2 cut(s)	65, 1414
TaqI	TCGA	5 cut(s)	411, 490, 761, 938, 1385
TasI	AATT	7 cut(s)	673, 718, 743, 751, 1170, 1272, 1463
TatI	WGTACW	1 cut(s)	344
TfiI	GAWTC	3 cut(s)	467, 679, 1684
Tru1I	TTAA	4 cut(s)	317, 341, 1092, 1293
Tru9I	TTAA	4 cut(s)	317, 341, 1092, 1293
TscAI	CASTG	2 cut(s)	186, 1554
TseFI	GTSAC	1 cut(s)	1576
TseI	GCWGC	8 cut(s)	551, 739, 987, 1186, 1189, 1247, 1377, 1701
Tsp45I	GTSAC	1 cut(s)	1576
TspDTI	ATGAA	7 cut(s)	91, 629, 633, 642, 743, 1395, 1600
TspGWI	ACGGA	1 cut(s)	1677
TspRI	CASTG	2 cut(s)	186, 1554
VpaK11BI	GGWCC	1 cut(s)	454
XapI	RAATTY	2 cut(s)	673, 1272
XceI	RCATGY	1 cut(s)	536
XcmI	CCANNNNNNNNNTGG	1 cut(s)	152
XhoI	CTCGAG	1 cut(s)	760
XmnI	GAANNNNTTC	1 cut(s)	1493
XspI	CTAG	5 cut(s)	239, 266, 366, 572, 1670
ZrmI	AGTACT	1 cut(s)	346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.