Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Reverse (-)

29687310 .. 29689894

Gene Structure 2585 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00189870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGTCTTCTTCAGTGCCCCTATACTCTGGGATTTATGCAGAGACTTTAATGTCAAACCAACCCAGTTGGTTAAACTTCTCTGACAGTAGCACATATTCGAGTACTAATGTAGAAGAGACTGTTGGGACCAGGGTTTTGATGCCAATACCAGGAGGACTTATTGAGCTTCTTGTTACCAAACAAGTACTTGAAGACCAGCATGTTATCGATTTCATCACAGAGCAATACAACATCTCAATAGAACAGGATCATATTGGTACAAGCTTTGGGGTAAACTTAGACACAATGACTCGTGATGAAATCCAATCAAAGCAAGTACTTTTAGACCACGAACAAATGGATCCCAGTAATCATGTTTTCTGCTCTAGCGATAATTCTGCCATGAACTTCTTGCAGCAGTTTACTCACAACTTGGGAAACAGGATGAAGAACATTAGTTATAATGTCAATTCTTTTGAAGATTCATCACATGCACCATTTCTTTCTGATAAGCAATTGGAGCACCCATTTAATAATTATTCGAAAAAAACTGGGTTTGATCAAGCAACGGAGGCAATGCAAAGGTCCATGATGATGAGTGAGACACAAGCCACACACCATATGCATATGCAATATATGGATCAGTCATTAGAACCAGGCATGGATCATGAGCTGGAGCAGGATGCCGGCAATAATGATAAGGATTCAAATATTATAAATGATGATGGAGGACATGCTACAGATTTGAACTCAGATTGCAGTGATCATGATCAGCTTGATGCTGAGGATGATGCAAAATATAGGAGGAGGAACGGAAAAGGGCAGGCCAAAAACCTTGTTGCGGAGAGAAAGAGAAGGAAGAAGCTTAATGACAGACTCTATGAACTTAGGTCTTTAGTTCCCAATATTTCCAAGTTGGATAGAGCTTCTATTCTTGGGGATGCAATTGAGTATGTGATGGAGTTGCAGAACCAAGCTAAAAAACTCCAAGATGAGCTTAATGATGATCATGATCACGAAGAAGTTAGCCATGTTCATGAAGGTGCTGCTAATAAGAACTGTGGCATCACTTTCCAACATAACAGTTTACAATCAGAGATTGATCAGAGTCAAAGTGGGGTTGACCTTAAAACTGAGCAAAATGATCATAAAGGTCCAAATGGGTTTCATTTGGGAACATCAGGAGACGGTAGTGTCTCAAAACAAAGCCCCGATTCAGAAGTTATCCATGATCACAAGACACAGCAGATGGAGCCCCAAGTGGAAGTAGCTCAAATAGATGGGAATCAGTTCTTTGTGAAAGTATTCTGTGAGCACAAGCCTGGTGGATTTGTGAGATTGATGGAGGCATTGAGCGCTCTGAGCCTGGAAGTTACTAATGCCAATGTAACTAGCTTCAGATGCCTCGTCTCTAATGTTTTCATCGTAGAGAAGAAGGATAGTGAACTAGTTGAAGCTGATGAAGTGAGAGACTCGTTGCTAGAGCTAACAAGGAACCCATTAAAATGGCGTAGTGAGGAAATGGCAAAAGCATCAGAGATTGGGATTGGCTTGGATAACAACCACCACCATCATCCCCATCACCAAAACCTCCACAACCACCATTTCAGTCCCTTCCGCTTACACCATCTTCCTACTGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

541

Amino Acids

61.22

Weight (kDa)

5.14

Isoelectric Point (pI)

54.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	1 - 73	9.4e-07	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	273 - 316	1.6e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	413 - 487	2.7e-11	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	441, 695
AasI	GACNNNNNNGTC	2 cut(s)	49, 1172
AciI	CCGC	2 cut(s)	821, 1597
AclWI	GGATC	5 cut(s)	255, 335, 348, 627, 651
AcuI	CTGAAG	1 cut(s)	1360
AfaI	GTAC	4 cut(s)	103, 186, 259, 318
AfeI	AGCGCT	1 cut(s)	1336
AfiI	CCNNNNNNNGG	2 cut(s)	149, 820
AgsI	TTSAA	5 cut(s)	191, 458, 687, 727, 1433
AhlI	ACTAGT	1 cut(s)	1426
AjnI	CCWGG	5 cut(s)	128, 148, 634, 1300, 1344
AjuI	GAANNNNNNNTTGG	2 cut(s)	105, 137
Alw21I	GWGCWC	2 cut(s)	504, 1296
Alw26I	GTCTC	7 cut(s)	35, 110, 575, 1158, 1180, 1393, 1443
AlwI	GGATC	5 cut(s)	255, 335, 348, 627, 651
Aor51HI	AGCGCT	1 cut(s)	1336
AoxI	GGCC	1 cut(s)	804
ApeKI	GCWGC	2 cut(s)	394, 1025
ArsI	GACNNNNNNTTYG	2 cut(s)	118, 150
Asp700I	GAANNNNTTC	2 cut(s)	1268, 1283
AspLEI	GCGC	1 cut(s)	1337
AspS9I	GGNCC	3 cut(s)	126, 564, 1133
AsuHPI	GGTGA	1 cut(s)	1553
AsuII	TTCGAA	1 cut(s)	521
AvaII	GGWCC	3 cut(s)	126, 564, 1133
BaeGI	GKGCMC	1 cut(s)	18
BamHI	GGATCC	1 cut(s)	340
BanII	GRGCYC	1 cut(s)	1236
BauI	CACGAG	1 cut(s)	291
BbsI	GAAGAC	1 cut(s)	198
Bbv12I	GWGCWC	2 cut(s)	504, 1296
BbvCI	CCTCAGC	1 cut(s)	762
BbvI	GCAGC	2 cut(s)	406, 1012
BccI	CCATC	8 cut(s)	698, 931, 1222, 1253, 1315, 1557, 1566, 1614
BcgI	CGANNNNNNTGC	2 cut(s)	359, 393
BciT130I	CCWGG	5 cut(s)	130, 150, 636, 1302, 1346
BclI	TGATCA	8 cut(s)	538, 742, 748, 985, 991, 1081, 1123, 1210
BcoDI	GTCTC	7 cut(s)	35, 110, 575, 1158, 1180, 1393, 1443
BcuI	ACTAGT	1 cut(s)	1426
BfaI	CTAG	4 cut(s)	366, 1371, 1427, 1460
BfmI	CTRYAG	1 cut(s)	717
BfoI	RGCGCY	1 cut(s)	1338
BisI	GCNGC	2 cut(s)	395, 1026
BlsI	GCNGC	2 cut(s)	396, 1027
BmcAI	AGTACT	3 cut(s)	103, 186, 318
Bme1390I	CCNGG	5 cut(s)	130, 150, 636, 1302, 1346
Bme18I	GGWCC	3 cut(s)	126, 564, 1133
BmgT120I	GGNCC	3 cut(s)	126, 564, 1133
BmiI	GGNNCC	4 cut(s)	127, 342, 1233, 1475
BmrFI	CCNGG	5 cut(s)	130, 150, 636, 1302, 1346
BmrI	ACTGGG	3 cut(s)	57, 339, 540
BmsI	GCATC	8 cut(s)	129, 652, 748, 760, 910, 1053, 1370, 1520
BmuI	ACTGGG	3 cut(s)	57, 339, 540
BpiI	GAAGAC	1 cut(s)	198
BpmI	CTGGAG	1 cut(s)	674
Bpu10I	CCTNAGC	1 cut(s)	762
Bpu14I	TTCGAA	1 cut(s)	521
Bsa29I	ATCGAT	1 cut(s)	207
BsaBI	GATNNNNATC	3 cut(s)	747, 990, 1263
BsaJI	CCNNGG	1 cut(s)	129
Bsc4I	CCNNNNNNNGG	2 cut(s)	149, 820
Bse118I	RCCGGY	1 cut(s)	665
Bse1I	ACTGG	3 cut(s)	63, 345, 535
Bse3DI	GCAATG	1 cut(s)	561
Bse8I	GATNNNNATC	3 cut(s)	747, 990, 1263
BseBI	CCWGG	5 cut(s)	130, 150, 636, 1302, 1346
BseCI	ATCGAT	1 cut(s)	207
BseDI	CCNNGG	1 cut(s)	129
BseGI	GGATG	5 cut(s)	429, 667, 772, 925, 1552
BseJI	GATNNNNATC	3 cut(s)	747, 990, 1263
BseLI	CCNNNNNNNGG	2 cut(s)	149, 820
BseMI	GCAATG	1 cut(s)	561
BseMII	CTCAG	4 cut(s)	744, 753, 1104, 1331
BseNI	ACTGG	3 cut(s)	63, 345, 535
BseRI	GAGGAG	1 cut(s)	799
BseSI	GKGCMC	1 cut(s)	18
BseXI	GCAGC	2 cut(s)	406, 1012
BshFI	GGCC	1 cut(s)	806
BshVI	ATCGAT	1 cut(s)	207
BsiHKAI	GWGCWC	2 cut(s)	504, 1296
BsiSI	CCGG	1 cut(s)	666
BslFI	GGGAC	2 cut(s)	139, 1575
BslI	CCNNNNNNNGG	2 cut(s)	149, 820
BsmAI	GTCTC	7 cut(s)	35, 110, 575, 1158, 1180, 1393, 1443
BsmBI	CGTCTC	2 cut(s)	1158, 1393
BsmFI	GGGAC	2 cut(s)	139, 1575
BsnI	GGCC	1 cut(s)	806
Bsp119I	TTCGAA	1 cut(s)	521
Bsp1286I	GDGCHC	4 cut(s)	18, 504, 1236, 1296
BspACI	CCGC	2 cut(s)	821, 1597
BspANI	GGCC	1 cut(s)	806
BspCNI	CTCAG	4 cut(s)	743, 754, 1105, 1332
BspDI	ATCGAT	1 cut(s)	207
BspHI	TCATGA	4 cut(s)	646, 745, 988, 1015
BspLI	GGNNCC	4 cut(s)	127, 342, 1233, 1475
BspPI	GGATC	5 cut(s)	255, 335, 348, 627, 651
BspT104I	TTCGAA	1 cut(s)	521
BsrDI	GCAATG	1 cut(s)	561
BsrFI	RCCGGY	1 cut(s)	665
BsrI	ACTGG	3 cut(s)	63, 345, 535
BssAI	RCCGGY	1 cut(s)	665
BssECI	CCNNGG	1 cut(s)	129
BssSI	CACGAG	1 cut(s)	291
Bst2BI	CACGAG	1 cut(s)	291
Bst2UI	CCWGG	5 cut(s)	130, 150, 636, 1302, 1346
Bst4CI	ACNGT	5 cut(s)	86, 121, 1040, 1064, 1169
Bst6I	CTCTTC	1 cut(s)	108
BstBI	TTCGAA	1 cut(s)	521
BstC8I	GCNNGC	2 cut(s)	667, 804
BstDEI	CTNAG	6 cut(s)	277, 730, 762, 866, 1113, 1340
BstF5I	GGATG	5 cut(s)	429, 667, 772, 925, 1552
BstH2I	RGCGCY	1 cut(s)	1338
BstHHI	GCGC	1 cut(s)	1337
BstMAI	GTCTC	7 cut(s)	35, 110, 575, 1158, 1180, 1393, 1443
BstMWI	GCNNNNNNNGC	6 cut(s)	499, 551, 1231, 1334, 1341, 1380
BstNI	CCWGG	5 cut(s)	130, 150, 636, 1302, 1346
BstNSI	RCATGY	3 cut(s)	203, 473, 716
BstSCI	CCNGG	5 cut(s)	128, 148, 634, 1300, 1344
BstSFI	CTRYAG	1 cut(s)	717
BstSLI	GKGCMC	1 cut(s)	18
BstV1I	GCAGC	2 cut(s)	406, 1012
BstV2I	GAAGAC	1 cut(s)	198
BstX2I	RGATCY	1 cut(s)	340
BstXI	CCANNNNNNTGG	1 cut(s)	1485
BstYI	RGATCY	1 cut(s)	340
Bsu15I	ATCGAT	1 cut(s)	207
BsuRI	GGCC	1 cut(s)	806
BsuTUI	ATCGAT	1 cut(s)	207
BtsCI	GGATG	5 cut(s)	429, 667, 772, 925, 1552
BtsI	GCAGTG	1 cut(s)	745
BtsIMutI	CAGTG	2 cut(s)	18, 745
Cac8I	GCNNGC	2 cut(s)	667, 804
CciI	TCATGA	4 cut(s)	646, 745, 988, 1015
CfoI	GCGC	1 cut(s)	1337
Cfr10I	RCCGGY	1 cut(s)	665
Cfr13I	GGNCC	3 cut(s)	126, 564, 1133
ClaI	ATCGAT	1 cut(s)	207
Csp6I	GTAC	4 cut(s)	102, 185, 258, 317
CspCI	CAANNNNNGTGG	2 cut(s)	1285, 1320
CviQI	GTAC	4 cut(s)	102, 185, 258, 317
DdeI	CTNAG	6 cut(s)	277, 730, 762, 866, 1113, 1340
DrdI	GACNNNNNNGTC	2 cut(s)	49, 1172
DseDI	GACNNNNNNGTC	2 cut(s)	49, 1172
Eam1104I	CTCTTC	1 cut(s)	108
EarI	CTCTTC	1 cut(s)	108
Eco24I	GRGCYC	1 cut(s)	1236
Eco47I	GGWCC	3 cut(s)	126, 564, 1133
Eco47III	AGCGCT	1 cut(s)	1336
Eco57I	CTGAAG	1 cut(s)	1360
EcoRII	CCWGG	5 cut(s)	128, 148, 634, 1300, 1344
EcoT22I	ATGCAT	1 cut(s)	606
EcoT38I	GRGCYC	1 cut(s)	1236
Esp3I	CGTCTC	2 cut(s)	1158, 1393
FalI	AAGNNNNNCTT	2 cut(s)	960, 992
FaqI	GGGAC	2 cut(s)	139, 1575
FauNDI	CATATG	2 cut(s)	600, 606
FbaI	TGATCA	8 cut(s)	538, 742, 748, 985, 991, 1081, 1123, 1210
Fnu4HI	GCNGC	2 cut(s)	395, 1026
FokI	GGATG	5 cut(s)	436, 674, 779, 932, 1539
FriOI	GRGCYC	1 cut(s)	1236
Fsp4HI	GCNGC	2 cut(s)	395, 1026
FspBI	CTAG	4 cut(s)	366, 1371, 1427, 1460
GlaI	GCGC	1 cut(s)	1336
GluI	GCNGC	2 cut(s)	395, 1026
GsuI	CTGGAG	1 cut(s)	674
HaeII	RGCGCY	1 cut(s)	1338
HaeIII	GGCC	1 cut(s)	806
HapII	CCGG	1 cut(s)	666
HhaI	GCGC	1 cut(s)	1337
Hin6I	GCGC	1 cut(s)	1335
HinP1I	GCGC	1 cut(s)	1335
HincII	GTYRAC	1 cut(s)	1102
HindII	GTYRAC	1 cut(s)	1102
HindIII	AAGCTT	2 cut(s)	262, 842
HinfI	GANTC	8 cut(s)	289, 461, 683, 855, 1087, 1193, 1264, 1451
HpaII	CCGG	1 cut(s)	666
HphI	GGTGA	1 cut(s)	1553
Hpy166II	GTNNAC	5 cut(s)	274, 402, 1067, 1102, 1424
Hpy188I	TCNGA	9 cut(s)	82, 487, 733, 1075, 1086, 1198, 1341, 1379, 1516
Hpy188III	TCNNGA	7 cut(s)	293, 647, 746, 989, 995, 1016, 1161
Hpy8I	GTNNAC	5 cut(s)	274, 402, 1067, 1102, 1424
HpyAV	CCTTC	4 cut(s)	828, 1013, 1408, 1603
HpyCH4III	ACNGT	5 cut(s)	86, 121, 1040, 1064, 1169
HpyF10VI	GCNNNNNNNGC	6 cut(s)	499, 551, 1231, 1334, 1341, 1380
HpyF3I	CTNAG	6 cut(s)	277, 730, 762, 866, 1113, 1340
HspAI	GCGC	1 cut(s)	1335
KroI	GCCGGC	1 cut(s)	665
KroNI	GCCGGC	1 cut(s)	667
Ksp22I	TGATCA	8 cut(s)	538, 742, 748, 985, 991, 1081, 1123, 1210
LmnI	GCTCC	3 cut(s)	499, 655, 1231
Lsp1109I	GCAGC	2 cut(s)	406, 1012
LweI	GCATC	8 cut(s)	129, 652, 748, 760, 910, 1053, 1370, 1520
MaeI	CTAG	4 cut(s)	366, 1371, 1427, 1460
MaeIII	GTNAC	3 cut(s)	172, 1351, 1366
MboII	GAAGA	8 cut(s)	125, 203, 439, 470, 850, 1010, 1423, 1601
MfeI	CAATTG	2 cut(s)	494, 924
MflI	RGATCY	1 cut(s)	340
MhlI	GDGCHC	4 cut(s)	18, 504, 1236, 1296
MluCI	AATT	5 cut(s)	373, 448, 494, 514, 924
MlyI	GAGTC	4 cut(s)	283, 849, 1096, 1445
MmeI	TCCRAC	2 cut(s)	876, 1078
Mph1103I	ATGCAT	1 cut(s)	606
MroNI	GCCGGC	1 cut(s)	665
MroXI	GAANNNNTTC	2 cut(s)	1268, 1283
MseI	TTAA	7 cut(s)	47, 71, 510, 846, 978, 1107, 1481
MslI	CAYNNNNRTG	4 cut(s)	572, 1014, 1020, 1483
MspI	CCGG	1 cut(s)	666
MspR9I	CCNGG	5 cut(s)	130, 150, 636, 1302, 1346
MunI	CAATTG	2 cut(s)	494, 924
MvaI	CCWGG	5 cut(s)	130, 150, 636, 1302, 1346
MwoI	GCNNNNNNNGC	6 cut(s)	499, 551, 1231, 1334, 1341, 1380
NaeI	GCCGGC	1 cut(s)	667
NdeI	CATATG	2 cut(s)	600, 606
NgoMIV	GCCGGC	1 cut(s)	665
NlaIV	GGNNCC	4 cut(s)	127, 342, 1233, 1475
NsiI	ATGCAT	1 cut(s)	606
NspI	RCATGY	3 cut(s)	203, 473, 716
NspV	TTCGAA	1 cut(s)	521
PagI	TCATGA	4 cut(s)	646, 745, 988, 1015
PdiI	GCCGGC	1 cut(s)	667
PdmI	GAANNNNTTC	2 cut(s)	1268, 1283
PfeI	GAWTC	4 cut(s)	461, 683, 1193, 1264
PkrI	GCNGC	2 cut(s)	396, 1027
PleI	GAGTC	4 cut(s)	283, 849, 1095, 1445
PpsI	GAGTC	4 cut(s)	283, 849, 1095, 1445
PsiI	TTATAA	2 cut(s)	441, 695
Psp6I	CCWGG	5 cut(s)	128, 148, 634, 1300, 1344
PspGI	CCWGG	5 cut(s)	128, 148, 634, 1300, 1344
PspN4I	GGNNCC	4 cut(s)	127, 342, 1233, 1475
PspPI	GGNCC	3 cut(s)	126, 564, 1133
PsuI	RGATCY	1 cut(s)	340
RsaI	GTAC	4 cut(s)	103, 186, 259, 318
RsaNI	GTAC	4 cut(s)	102, 185, 258, 317
RseI	CAYNNNNRTG	4 cut(s)	572, 1014, 1020, 1483
SaqAI	TTAA	7 cut(s)	47, 71, 510, 846, 978, 1107, 1481
SatI	GCNGC	2 cut(s)	395, 1026
Sau96I	GGNCC	3 cut(s)	126, 564, 1133
ScaI	AGTACT	3 cut(s)	103, 186, 318
SchI	GAGTC	4 cut(s)	283, 849, 1096, 1445
ScrFI	CCNGG	5 cut(s)	130, 150, 636, 1302, 1346
SduI	GDGCHC	4 cut(s)	18, 504, 1236, 1296
SfaNI	GCATC	8 cut(s)	129, 652, 748, 760, 910, 1053, 1370, 1520
SfcI	CTRYAG	1 cut(s)	717
SfuI	TTCGAA	1 cut(s)	521
SinI	GGWCC	3 cut(s)	126, 564, 1133
SmiMI	CAYNNNNRTG	4 cut(s)	572, 1014, 1020, 1483
SpeI	ACTAGT	1 cut(s)	1426
Sse9I	AATT	5 cut(s)	373, 448, 494, 514, 924
SsiI	CCGC	2 cut(s)	821, 1597
SspI	AATATT	2 cut(s)	691, 886
SspMI	CTAG	4 cut(s)	366, 1371, 1427, 1460
StyD4I	CCNGG	5 cut(s)	128, 148, 634, 1300, 1344
TaaI	ACNGT	5 cut(s)	86, 121, 1040, 1064, 1169
TaqI	TCGA	3 cut(s)	98, 207, 521
TasI	AATT	5 cut(s)	373, 448, 494, 514, 924
TatI	WGTACW	3 cut(s)	101, 184, 316
TfiI	GAWTC	4 cut(s)	461, 683, 1193, 1264
Tru1I	TTAA	7 cut(s)	47, 71, 510, 846, 978, 1107, 1481
Tru9I	TTAA	7 cut(s)	47, 71, 510, 846, 978, 1107, 1481
TscAI	CASTG	2 cut(s)	18, 745
TseI	GCWGC	2 cut(s)	394, 1025
TspGWI	ACGGA	2 cut(s)	563, 807
TspRI	CASTG	2 cut(s)	18, 745
VpaK11BI	GGWCC	3 cut(s)	126, 564, 1133
XceI	RCATGY	3 cut(s)	203, 473, 716
XmnI	GAANNNNTTC	2 cut(s)	1268, 1283
XspI	CTAG	4 cut(s)	366, 1371, 1427, 1460
ZrmI	AGTACT	3 cut(s)	103, 186, 318
Zsp2I	ATGCAT	1 cut(s)	606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.