Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Reverse (-)

60153555 .. 60155543

Gene Structure 1989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G034840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGAGGGGAATTCGTACCAGAGGTTCCCTCGGGTGAAAATCAGGCACGATTACCTCAAGTTCAAGCTCTGCGACACCGACAGGAGTGTGGCCAACGGGCTTCGGCGCGTGATGATCGCTGAGGTCCCGACCGTCTCCATCGACCTCGTCGAGATCGAAATCAACTTCTGCGTCCTCAATGACGAGTTCGTCGCCCACCGTCTCGGCCTCATCCCCTTGACCAGCGATCGCGCCATGAGCATGCGCTTCTCACGTCACTGCGACGCCTGCGACGGTGACGGCCAGTGCGAGTACTGCTCCGTCGAGTTTAACCTTCGCGCTCGCTACCACTTAAAACCAAACCCTAGATGTCACCAGCAAGGAACTCCTCAGCTCCGACCACACCGTCGTCCCGTCAATTTCTGCGACGCCTCCGGTTACGAAGCTTCCGAACAGAGGCTGAGGGCTATTGCTAGAAAAGGGATTGGCAAAGAATTGAGAACCAAGAATTCTACACTCCAAATTAAAAATGGCCTGTTCAGTGTAATGAACATGACTATGTATAGTCTGATAATTGAGAGGCTTAGACCCCTTGTGGGTTTGAAAGGCTGGGATTTTTGTGTTCTCTGGAAATTCATTGAGTGGATTGGTTGCTGTTGTTATGGGATTGATGAGGACACCCATAATGGTGGACAAGAACTTCTGTTTCCAGTTTATCAAGTCTTTCAGTGCAGGGATGCAATGCAGCTCTCAAGAACTAATTCTTTTGATATCCTTGGTCATCTTCCTTCCTCAATGCCCTTAGACTCTGGGATTCATGTAAAAATATTAATGTCAAACCAGTCTTGTTGGTTGAACTGTTCCTCTAGTAACAGAGATTCAAGTGCTATATATACTGTGTTTAATATCATTAAGTTTCCTACTTATACAATGCAGGAAAGAGATGGGACCCGAGTTTTGGTTCCAACTGCAGGAGGGTTTATGATTGAGCTGTTTGTCTCCAAAGATGTCTCCGAGGACCAGCATGTCATTGATTTCATCACAGCACAATGCGACATTTGGTGCAAGCAAGATACCCTGATCAGTGCAAGCAACACATGTAGTACAAACACCCCTGTACTTTCCCCATCAATGGCATCATTAGATCCTCATGATGCGAATTTGCCATACGATATCACAGTACCATTGAACTTCCTGCAACATGTCAGTAATTACAACTTTGAGAATAGAATGAAGAATAGTACTGGTGCATGTCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

412

Amino Acids

46.88

Weight (kDa)

6.84

Isoelectric Point (pI)

45.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNA_pol_L	PF01193	21 - 128	6.2e-06	RNA polymerase Rpb3/Rpb11 dimerisation domain
bHLH-MYC_N	PF14215	186 - 341	4.4e-08	bHLH-MYC and R2R3-MYB transcription factors N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	188, 384, 1004
AccII	CGCG	3 cut(s)	108, 231, 318
AclWI	GGATC	1 cut(s)	1118
AcoI	YGGCCR	2 cut(s)	90, 280
AcsI	RAATTY	4 cut(s)	10, 487, 611, 1138
AcyI	GRCGYC	2 cut(s)	264, 408
AfaI	GTAC	6 cut(s)	17, 293, 1084, 1098, 1161, 1222
AfiI	CCNNNNNNNGG	5 cut(s)	435, 575, 937, 950, 1111
AflIII	ACRYGT	2 cut(s)	1076, 1180
AgsI	TTSAA	5 cut(s)	64, 583, 835, 861, 1168
AjiI	CACGTC	1 cut(s)	254
AluBI	AGCT	5 cut(s)	67, 373, 425, 727, 970
AluI	AGCT	5 cut(s)	67, 373, 425, 727, 970
Alw26I	GTCTC	4 cut(s)	139, 206, 982, 994
AlwI	GGATC	1 cut(s)	1118
AlwNI	CAGNNNCTG	1 cut(s)	439
Ama87I	CYCGRG	2 cut(s)	30, 930
AoxI	GGCC	4 cut(s)	90, 205, 280, 511
ApeKI	GCWGC	1 cut(s)	724
ApoI	RAATTY	4 cut(s)	10, 487, 611, 1138
ArsI	GACNNNNNNTTYG	2 cut(s)	919, 951
AseI	ATTAAT	1 cut(s)	809
AsiSI	GCGATCGC	1 cut(s)	229
Asp700I	GAANNNNTTC	1 cut(s)	739
AspLEI	GCGC	4 cut(s)	108, 233, 246, 320
AspS9I	GGNCC	3 cut(s)	124, 927, 997
AsuHPI	GGTGA	3 cut(s)	46, 287, 344
AvaI	CYCGRG	2 cut(s)	30, 930
AvaII	GGWCC	3 cut(s)	124, 927, 997
BalI	TGGCCA	1 cut(s)	92
BbvCI	CCTCAGC	3 cut(s)	120, 369, 440
BbvI	GCAGC	1 cut(s)	736
BccI	CCATC	3 cut(s)	146, 917, 1114
BceAI	ACGGC	1 cut(s)	295
BclI	TGATCA	1 cut(s)	1059
BcoDI	GTCTC	4 cut(s)	139, 206, 982, 994
BfaI	CTAG	3 cut(s)	345, 453, 846
BfmI	CTRYAG	1 cut(s)	948
BisI	GCNGC	1 cut(s)	725
BlsI	GCNGC	1 cut(s)	726
BmcAI	AGTACT	2 cut(s)	293, 1222
Bme18I	GGWCC	3 cut(s)	124, 927, 997
BmeT110I	CYCGRG	2 cut(s)	30, 930
BmgBI	CACGTC	1 cut(s)	254
BmgT120I	GGNCC	3 cut(s)	124, 927, 997
BmiI	GGNNCC	5 cut(s)	26, 126, 928, 929, 942
BmsI	GCATC	3 cut(s)	706, 1123, 1124
BplI	GAGNNNNNCTC	4 cut(s)	13, 45, 281, 313
Bpu10I	CCTNAGC	3 cut(s)	120, 369, 440
BpuEI	CTTGAG	2 cut(s)	41, 715
BsaBI	GATNNNNATC	1 cut(s)	158
BsaHI	GRCGYC	2 cut(s)	264, 408
BsaJI	CCNNGG	3 cut(s)	29, 754, 993
BsaWI	WCCGGW	1 cut(s)	413
Bsc4I	CCNNNNNNNGG	5 cut(s)	435, 575, 937, 950, 1111
Bse1I	ACTGG	4 cut(s)	283, 689, 820, 1228
Bse3DI	GCAATG	1 cut(s)	726
Bse8I	GATNNNNATC	1 cut(s)	158
BseDI	CCNNGG	3 cut(s)	29, 754, 993
BseGI	GGATG	2 cut(s)	210, 721
BseJI	GATNNNNATC	1 cut(s)	158
BseLI	CCNNNNNNNGG	5 cut(s)	435, 575, 937, 950, 1111
BseMI	GCAATG	1 cut(s)	726
BseMII	CTCAG	3 cut(s)	111, 383, 431
BseNI	ACTGG	4 cut(s)	283, 689, 820, 1228
BseRI	GAGGAG	1 cut(s)	357
BseXI	GCAGC	1 cut(s)	736
BseYI	CCCAGC	1 cut(s)	588
BsgI	GTGCAG	1 cut(s)	730
Bsh1236I	CGCG	3 cut(s)	108, 231, 318
Bsh1285I	CGRYCG	2 cut(s)	132, 229
BshFI	GGCC	4 cut(s)	92, 207, 282, 513
BsiEI	CGRYCG	2 cut(s)	132, 229
BsiHKCI	CYCGRG	2 cut(s)	30, 930
BsiSI	CCGG	1 cut(s)	414
BslFI	GGGAC	4 cut(s)	110, 375, 940, 1218
BslI	CCNNNNNNNGG	5 cut(s)	435, 575, 937, 950, 1111
BsmAI	GTCTC	4 cut(s)	139, 206, 982, 994
BsmBI	CGTCTC	2 cut(s)	139, 206
BsmFI	GGGAC	4 cut(s)	110, 375, 940, 1218
BsnI	GGCC	4 cut(s)	92, 207, 282, 513
BsoBI	CYCGRG	2 cut(s)	30, 930
Bsp143I	GATC	5 cut(s)	114, 153, 226, 1059, 1123
BspANI	GGCC	4 cut(s)	92, 207, 282, 513
BspCNI	CTCAG	3 cut(s)	112, 382, 432
BspFNI	CGCG	3 cut(s)	108, 231, 318
BspHI	TCATGA	1 cut(s)	1129
BspLI	GGNNCC	5 cut(s)	26, 126, 928, 929, 942
BspMAI	CTGCAG	1 cut(s)	952
BspPI	GGATC	1 cut(s)	1118
BsrDI	GCAATG	1 cut(s)	726
BsrI	ACTGG	4 cut(s)	283, 689, 820, 1228
BssECI	CCNNGG	3 cut(s)	29, 754, 993
BssMI	GATC	5 cut(s)	114, 153, 226, 1059, 1123
BssNI	GRCGYC	2 cut(s)	264, 408
BssT1I	CCWWGG	1 cut(s)	754
Bst4CI	ACNGT	7 cut(s)	133, 200, 275, 386, 839, 877, 1159
BstACI	GRCGYC	2 cut(s)	264, 408
BstC8I	GCNNGC	5 cut(s)	242, 268, 322, 1046, 1069
BstDEI	CTNAG	5 cut(s)	120, 369, 440, 563, 781
BstF5I	GGATG	2 cut(s)	210, 721
BstFNI	CGCG	3 cut(s)	108, 231, 318
BstHHI	GCGC	4 cut(s)	108, 233, 246, 320
BstKTI	GATC	5 cut(s)	117, 156, 229, 1062, 1126
BstMAI	GTCTC	4 cut(s)	139, 206, 982, 994
BstMBI	GATC	5 cut(s)	114, 153, 226, 1059, 1123
BstMCI	CGRYCG	2 cut(s)	132, 229
BstMWI	GCNNNNNNNGC	3 cut(s)	237, 267, 294
BstNSI	RCATGY	5 cut(s)	244, 1007, 1080, 1184, 1233
BstSFI	CTRYAG	1 cut(s)	948
BstUI	CGCG	3 cut(s)	108, 231, 318
BstV1I	GCAGC	1 cut(s)	736
BstX2I	RGATCY	1 cut(s)	1123
BstXI	CCANNNNNNTGG	1 cut(s)	668
BstYI	RGATCY	1 cut(s)	1123
BsuRI	GGCC	4 cut(s)	92, 207, 282, 513
BtrI	CACGTC	1 cut(s)	254
BtsCI	GGATG	2 cut(s)	210, 721
BtsI	GCAGTG	1 cut(s)	256
BtsIMutI	CAGTG	5 cut(s)	256, 290, 526, 713, 1069
Cac8I	GCNNGC	5 cut(s)	242, 268, 322, 1046, 1069
CaiI	CAGNNNCTG	1 cut(s)	439
CciI	TCATGA	1 cut(s)	1129
CfoI	GCGC	4 cut(s)	108, 233, 246, 320
Cfr13I	GGNCC	3 cut(s)	124, 927, 997
CseI	GACGC	3 cut(s)	160, 272, 416
Csp6I	GTAC	6 cut(s)	16, 292, 1083, 1097, 1160, 1221
CviAII	CATG	9 cut(s)	235, 241, 532, 797, 1004, 1077, 1130, 1181, 1230
CviQI	GTAC	6 cut(s)	16, 292, 1083, 1097, 1160, 1221
DdeI	CTNAG	5 cut(s)	120, 369, 440, 563, 781
DpnI	GATC	5 cut(s)	116, 155, 228, 1061, 1125
DpnII	GATC	5 cut(s)	114, 153, 226, 1059, 1123
DrdI	GACNNNNNNGTC	3 cut(s)	188, 384, 1004
DseDI	GACNNNNNNGTC	3 cut(s)	188, 384, 1004
EaeI	YGGCCR	2 cut(s)	90, 280
Eco130I	CCWWGG	1 cut(s)	754
Eco32I	GATATC	2 cut(s)	751, 1153
Eco47I	GGWCC	3 cut(s)	124, 927, 997
Eco88I	CYCGRG	2 cut(s)	30, 930
EcoO109I	RGGNCCY	2 cut(s)	124, 927
EcoRI	GAATTC	2 cut(s)	10, 487
EcoRV	GATATC	2 cut(s)	751, 1153
EcoT14I	CCWWGG	1 cut(s)	754
ErhI	CCWWGG	1 cut(s)	754
Esp3I	CGTCTC	2 cut(s)	139, 206
FaeI	CATG	9 cut(s)	238, 244, 535, 800, 1007, 1080, 1133, 1184, 1233
FaqI	GGGAC	4 cut(s)	110, 375, 940, 1218
FatI	CATG	9 cut(s)	234, 240, 531, 796, 1003, 1076, 1129, 1180, 1229
FbaI	TGATCA	1 cut(s)	1059
Fnu4HI	GCNGC	1 cut(s)	725
FokI	GGATG	2 cut(s)	197, 728
Fsp4HI	GCNGC	1 cut(s)	725
FspBI	CTAG	3 cut(s)	345, 453, 846
GlaI	GCGC	4 cut(s)	107, 232, 245, 319
GluI	GCNGC	1 cut(s)	725
GsaI	CCCAGC	1 cut(s)	592
HaeIII	GGCC	4 cut(s)	92, 207, 282, 513
HapII	CCGG	1 cut(s)	414
HgaI	GACGC	3 cut(s)	160, 272, 416
HhaI	GCGC	4 cut(s)	108, 233, 246, 320
Hin1I	GRCGYC	2 cut(s)	264, 408
Hin1II	CATG	9 cut(s)	238, 244, 535, 800, 1007, 1080, 1133, 1184, 1233
Hin6I	GCGC	4 cut(s)	106, 231, 244, 318
HinP1I	GCGC	4 cut(s)	106, 231, 244, 318
HindIII	AAGCTT	1 cut(s)	423
HinfI	GANTC	3 cut(s)	785, 793, 857
HpaII	CCGG	1 cut(s)	414
HphI	GGTGA	3 cut(s)	46, 287, 344
Hpy166II	GTNNAC	1 cut(s)	671
Hpy188I	TCNGA	4 cut(s)	377, 430, 549, 994
Hpy188III	TCNNGA	5 cut(s)	127, 151, 607, 732, 1130
Hpy8I	GTNNAC	1 cut(s)	671
Hpy99I	CGWCG	7 cut(s)	152, 194, 266, 275, 305, 390, 410
HpyAV	CCTTC	2 cut(s)	323, 777
HpyCH4III	ACNGT	7 cut(s)	133, 200, 275, 386, 839, 877, 1159
HpyCH4IV	ACGT	1 cut(s)	253
HpyCH4V	TGCA	9 cut(s)	711, 719, 724, 913, 950, 1044, 1067, 1177, 1229
HpyF10VI	GCNNNNNNNGC	3 cut(s)	237, 267, 294
HpyF3I	CTNAG	5 cut(s)	120, 369, 440, 563, 781
HpySE526I	ACGT	1 cut(s)	253
Hsp92I	GRCGYC	2 cut(s)	264, 408
Hsp92II	CATG	9 cut(s)	238, 244, 535, 800, 1007, 1080, 1133, 1184, 1233
HspAI	GCGC	4 cut(s)	106, 231, 244, 318
KflI	GGGWCCC	1 cut(s)	927
Ksp22I	TGATCA	1 cut(s)	1059
Kzo9I	GATC	5 cut(s)	114, 153, 226, 1059, 1123
LmnI	GCTCC	2 cut(s)	302, 378
Lsp1109I	GCAGC	1 cut(s)	736
LweI	GCATC	3 cut(s)	706, 1123, 1124
MaeI	CTAG	3 cut(s)	345, 453, 846
MaeII	ACGT	1 cut(s)	253
MaeIII	GTNAC	5 cut(s)	254, 275, 350, 416, 848
MalI	GATC	5 cut(s)	116, 155, 228, 1061, 1125
MboI	GATC	5 cut(s)	114, 153, 226, 1059, 1123
MboII	GAAGA	2 cut(s)	755, 1225
MflI	RGATCY	1 cut(s)	1123
MlsI	TGGCCA	1 cut(s)	92
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	1 cut(s)	779
MmeI	TCCRAC	2 cut(s)	400, 968
Mox20I	TGGCCA	1 cut(s)	92
MroXI	GAANNNNTTC	1 cut(s)	739
MscI	TGGCCA	1 cut(s)	92
MseI	TTAA	6 cut(s)	309, 332, 504, 809, 882, 891
MslI	CAYNNNNRTG	3 cut(s)	239, 536, 666
Msp20I	TGGCCA	1 cut(s)	92
MspI	CCGG	1 cut(s)	414
MvnI	CGCG	3 cut(s)	108, 231, 318
MwoI	GCNNNNNNNGC	3 cut(s)	237, 267, 294
NdeII	GATC	5 cut(s)	114, 153, 226, 1059, 1123
NlaIII	CATG	9 cut(s)	238, 244, 535, 800, 1007, 1080, 1133, 1184, 1233
NlaIV	GGNNCC	5 cut(s)	26, 126, 928, 929, 942
NmeAIII	GCCGAG	1 cut(s)	183
NmuCI	GTSAC	3 cut(s)	254, 275, 350
NspI	RCATGY	5 cut(s)	244, 1007, 1080, 1184, 1233
PaeI	GCATGC	1 cut(s)	244
PagI	TCATGA	1 cut(s)	1129
PciI	ACATGT	2 cut(s)	1076, 1180
PcsI	WCGNNNNNNNCGW	4 cut(s)	147, 153, 285, 426
PdmI	GAANNNNTTC	1 cut(s)	739
PfeI	GAWTC	2 cut(s)	793, 857
PflFI	GACNNNGTC	1 cut(s)	146
PkrI	GCNGC	1 cut(s)	726
Ple19I	CGATCG	1 cut(s)	229
PleI	GAGTC	1 cut(s)	779
PpsI	GAGTC	1 cut(s)	779
PpuMI	RGGWCCY	2 cut(s)	124, 927
PscI	ACATGT	2 cut(s)	1076, 1180
PshBI	ATTAAT	1 cut(s)	809
Psp5II	RGGWCCY	2 cut(s)	124, 927
PspFI	CCCAGC	1 cut(s)	588
PspN4I	GGNNCC	5 cut(s)	26, 126, 928, 929, 942
PspPI	GGNCC	3 cut(s)	124, 927, 997
PspPPI	RGGWCCY	2 cut(s)	124, 927
PsrI	GAACNNNNNNTAC	2 cut(s)	8, 40
PstI	CTGCAG	1 cut(s)	952
PstNI	CAGNNNCTG	1 cut(s)	439
PsuI	RGATCY	1 cut(s)	1123
PsyI	GACNNNGTC	1 cut(s)	146
PvuI	CGATCG	1 cut(s)	229
RgaI	GCGATCGC	1 cut(s)	229
RsaI	GTAC	6 cut(s)	17, 293, 1084, 1098, 1161, 1222
RsaNI	GTAC	6 cut(s)	16, 292, 1083, 1097, 1160, 1221
RseI	CAYNNNNRTG	3 cut(s)	239, 536, 666
SaqAI	TTAA	6 cut(s)	309, 332, 504, 809, 882, 891
SatI	GCNGC	1 cut(s)	725
Sau3AI	GATC	5 cut(s)	114, 153, 226, 1059, 1123
Sau96I	GGNCC	3 cut(s)	124, 927, 997
ScaI	AGTACT	2 cut(s)	293, 1222
SchI	GAGTC	1 cut(s)	779
SfaAI	GCGATCGC	1 cut(s)	229
SfaNI	GCATC	3 cut(s)	706, 1123, 1124
SfcI	CTRYAG	1 cut(s)	948
SgfI	GCGATCGC	1 cut(s)	229
SinI	GGWCC	3 cut(s)	124, 927, 997
SmiMI	CAYNNNNRTG	3 cut(s)	239, 536, 666
SmlI	CTYRAG	2 cut(s)	56, 730
SmoI	CTYRAG	2 cut(s)	56, 730
SphI	GCATGC	1 cut(s)	244
SspI	AATATT	1 cut(s)	807
SspMI	CTAG	3 cut(s)	345, 453, 846
StyI	CCWWGG	1 cut(s)	754
TaaI	ACNGT	7 cut(s)	133, 200, 275, 386, 839, 877, 1159
TaiI	ACGT	1 cut(s)	256
TaqI	TCGA	4 cut(s)	141, 150, 156, 303
TatI	WGTACW	4 cut(s)	291, 1082, 1096, 1220
TfiI	GAWTC	2 cut(s)	793, 857
Tru1I	TTAA	6 cut(s)	309, 332, 504, 809, 882, 891
Tru9I	TTAA	6 cut(s)	309, 332, 504, 809, 882, 891
TscAI	CASTG	5 cut(s)	263, 290, 526, 713, 1069
TseFI	GTSAC	3 cut(s)	254, 275, 350
TseI	GCWGC	1 cut(s)	724
Tsp45I	GTSAC	3 cut(s)	254, 275, 350
TspDTI	ATGAA	5 cut(s)	542, 604, 785, 1006, 1226
TspGWI	ACGGA	1 cut(s)	289
TspRI	CASTG	5 cut(s)	263, 290, 526, 713, 1069
Tth111I	GACNNNGTC	1 cut(s)	146
VpaK11BI	GGWCC	3 cut(s)	124, 927, 997
VspI	ATTAAT	1 cut(s)	809
XapI	RAATTY	4 cut(s)	10, 487, 611, 1138
XceI	RCATGY	5 cut(s)	244, 1007, 1080, 1184, 1233
XcmI	CCANNNNNNNNNTGG	1 cut(s)	506
XmnI	GAANNNNTTC	1 cut(s)	739
XspI	CTAG	3 cut(s)	345, 453, 846
ZrmI	AGTACT	2 cut(s)	293, 1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.