Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001641

Physical Location & Seq

Genomic Coordinates Forward (+)

24568340 .. 24571862

Gene Structure 3523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1123000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGATGATCATGCCATACCTCATCCACAGGCTTAGATCTCTTGTGGGTTTGAAAGGCTGGGACTGTTGTGTTCTCTGGAAACTAAGTGAAGACCAAAGGTTATCAAACCATAACTACATTATCAATCTTTCAATTTCTTCATGTCCCAATATATATGTATATGTGCGCGTGCGTTTGATTGATTGTTGCTGTGCTGGGACTGAGATCAGCCAAACTGATGCTGGACAAAATCTTCCTTTCCCTCCTCCAGTGCTTGCATGTAGGGATACAATCTTACAGCATCCAAGAACCACATCTTGTGATCTTCTAGCCCAAATACCTTCTTCCATGCCCCTACACTCCGGGATTTATGCAGAGACCTTGATTTCAAACCAAACCAGTTGGTTAAACTTCTCTAACAACACATTTTTAAGTACATTAGAGGTATGTACCACTAGCTCCCTTTCTCCTATTTCCAGAAGGCACAGCCCCTTTGATATCGAGCTCATACTTTTCTTGATTACACTTGCAGGAAACTATTGGGACCAGGGTTGTGATTCCAATACCAGGAGGAATAATCGAGCTTCTTGTTACCAAACAAGTAATGTATTTGAAGATCAGCATGTTATTGATTTTGTCACAGCCCAATACAACCTCTCACTAGAGGAGGAGGCCCTGACTAGCATAACTGGTACGCGCAAAATGAGTGAAGTCGGATCAAAGCGATTTTTAGACCATCTTTCATTCAGAACTTCTTTAGAGAATTTGAATCTGCATCCATATGATGTATCCATGGAGAGAACAAGCAATTCTCCAATGAACTTCTCGCAGCAATTTACTAATTACAACTCGGGAAACCTAACCAAGAATAATATTGATATTTCTTCAGCAGAAAATGGGTTTCAAGAGATGGAGGCGATGCAGATGTCTATCACTAGTGAGAGACAACGGCACATGGATATGCAACAATATATGGAGGCATTAGTACCAAACATTGATCAGCAAGAGGGTAACGAGAAGCGGGACTCAAATACACATGAGGCAGAGGGACAAGCTGGGGATTTTATGTCGGATTGCAGCGATCAGATTGATGAGGAGGCGGATACAAAATATCAAAGGAGGACAGGGAAACGGCCTCAAGCCAAAAACCTTATAGCTGAGAGAAAGAGAAGGAAGAAGCTTAATGACAGACTTTATGCTCTTAGGTCTTTGGTTCCCATTATTTCTAAGTTGGACAGGGCCTCCATTCTTGGGGATGCAATTGAATATGTGAAGCAGCTGCAGAAGCAAGCTAAACAGCTTCAAGATGAGCTTGATGATCATGCAGAGGATGATGCTGCTAAGAACAATGTCAAATCAGAAATTCAGAGCCGAAGTGGAGTTGATCACATTAGGCCTAAAACTGATGATCATCAAGATGATCATAAAGCTTCAAATGGAATTCATTTTGGAACACCGGGAGACTGCAGTGTCTTCAAACAAAGCCGAGATTATTCATATGATGTCCATGATCACAAGACAGAACAGATGGAGCCCCAAGTGGAAGTGGCTCAATTGGACGGAAACCAGTTCTTTGTGAAAGTGTTCTGTGAGCAAAAGCCTGGTGGATTTGAGAGGTTGATGGAGGCTTTGAGTTCACTGTGCCTGGAAGTTACTAATGCAAATGTGACTACCTTCAGATGCCTTGTGTCCAATGTTTTCATTGTAGAGAAAAAGAATACTGATATGGTTGAAGCTGATGATAAAAAGGATACTGATATGGTTGAAGCTGATGATGTGAGAGACTCCTTGCTAGAGCTAATAAGGAACCCGTTAAGACCGCGCAACGAGACAGCTAAAACGGAGGAAAATGGCGTTGGCTTGGACAACCATCATGACCACCACCACCACCAACACCTCCACAATCACCATTTTAGTCCCCTCCACTTGCACCATCTTCCTAATGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

644

Amino Acids

73.43

Weight (kDa)

5.53

Isoelectric Point (pI)

52.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	378 - 421	2.6e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	506 - 574	6.2e-09	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16910
fragaria_vesca	FvH4_2g15460 FvH4_2g15460 FvH4_2g15470
malus_domestica	MD05G1122900.v1.1 MD05G1123000.v1.1 MD10G1125700.v1.1
prunus_persica	Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166800_v2.0.a1 Prupe.8G166900_v2.0.a1
pyrus_communis	pycom05g11720 pycom05g11750 pycom10g10820
rosa_chinensis	RchiOBHm_Chr6g0278441 RchiOBHm_Chr6g0278471
rosa_laevigata	RLG00000013226 RLG00000013228 RLG00000013381
rosa_multiflora	Rmu_sc0000258.1_g000003 Rmu_sc0000258.1_g000004
rosa_roxburghii	Rroxscaffold_3G00229220 Rroxscaffold_7G00189870 Rroxscaffold_7G00189880 Rroxscaffold_7G00190350
rosa_rugosa	Rorug06G0006400 Rorug06G0117000 Rorug06G0117100.1
rosa_samantha	Rh1DG021000 Rh2DG345500 Rh2DG346800 Rh3AG263900 Rh3CG365900 Rh3DG372000 Rh5CG269300 Rh6AG226300 Rh6BG230500 Rh6CG233600 Rh6DG224900 Rh7AG412300 Rh7CG321300 Rh7DG336100
rosa_wichuraiana	Rw0G018390 Rw3G029150 Rw5G034840 Rw6G019740 Rw6G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1448
AccII	CGCG	3 cut(s)	168, 676, 1801
AciI	CCGC	3 cut(s)	1000, 1079, 1799
AclWI	GGATC	1 cut(s)	703
AcsI	RAATTY	3 cut(s)	742, 1341, 1419
AcuI	CTGAAG	2 cut(s)	849, 1639
AfaI	GTAC	4 cut(s)	415, 430, 673, 966
AfiI	CCNNNNNNNGG	2 cut(s)	546, 1230
AhlI	ACTAGT	1 cut(s)	914
AjnI	CCWGG	4 cut(s)	525, 545, 1579, 1623
AjuI	GAANNNNNNNTTGG	2 cut(s)	1818, 1850
Alw21I	GWGCWC	1 cut(s)	486
Alw26I	GTCTC	5 cut(s)	350, 916, 1434, 1755, 1802
AlwI	GGATC	1 cut(s)	703
Ama87I	CYCGRG	1 cut(s)	829
AoxI	GGCC	4 cut(s)	651, 1112, 1218, 1373
ApeKI	GCWGC	5 cut(s)	808, 1056, 1255, 1258, 1316
ApoI	RAATTY	3 cut(s)	742, 1341, 1419
Asp700I	GAANNNNTTC	1 cut(s)	1562
AspLEI	GCGC	3 cut(s)	168, 678, 1803
AspS9I	GGNCC	3 cut(s)	523, 652, 1218
AsuC2I	CCSGG	2 cut(s)	343, 1437
AsuHPI	GGTGA	1 cut(s)	1877
AvaI	CYCGRG	1 cut(s)	829
AvaII	GGWCC	1 cut(s)	523
BanII	GRGCYC	2 cut(s)	486, 1515
BbsI	GAAGAC	2 cut(s)	96, 1444
Bbv12I	GWGCWC	1 cut(s)	486
BbvI	GCAGC	5 cut(s)	820, 1068, 1245, 1267, 1303
BccI	CCATC	6 cut(s)	723, 883, 1501, 1594, 1857, 1920
BceAI	ACGGC	2 cut(s)	944, 1127
BciT130I	CCWGG	4 cut(s)	527, 547, 1581, 1625
BciVI	GTATCC	4 cut(s)	259, 778, 1075, 1723
BclI	TGATCA	7 cut(s)	6, 976, 1297, 1363, 1387, 1399, 1489
BcnI	CCSGG	2 cut(s)	343, 1437
BcoDI	GTCTC	5 cut(s)	350, 916, 1434, 1755, 1802
BcuI	ACTAGT	1 cut(s)	914
BfaI	CTAG	6 cut(s)	308, 435, 641, 660, 915, 1772
BfmI	CTRYAG	2 cut(s)	1259, 1444
BfuI	GTATCC	4 cut(s)	259, 778, 1075, 1723
BglII	AGATCT	1 cut(s)	35
BisI	GCNGC	5 cut(s)	809, 1057, 1256, 1259, 1317
BlsI	GCNGC	5 cut(s)	810, 1058, 1257, 1260, 1318
Bme1390I	CCNGG	6 cut(s)	343, 527, 547, 1437, 1581, 1625
Bme18I	GGWCC	1 cut(s)	523
BmeT110I	CYCGRG	1 cut(s)	829
BmgT120I	GGNCC	3 cut(s)	523, 652, 1218
BmiI	GGNNCC	4 cut(s)	524, 1194, 1512, 1787
BmrFI	CCNGG	6 cut(s)	343, 527, 547, 1437, 1581, 1625
BmsI	GCATC	7 cut(s)	208, 289, 763, 888, 1225, 1303, 1649
BpiI	GAAGAC	2 cut(s)	96, 1444
BpmI	CTGGAG	1 cut(s)	231
BpuEI	CTTGAG	1 cut(s)	1101
BpuMI	CCSGG	2 cut(s)	343, 1437
BsaBI	GATNNNNATC	2 cut(s)	908, 1389
BsaI	GGTCTC	1 cut(s)	350
BsaJI	CCNNGG	2 cut(s)	526, 771
BsaXI	ACNNNNNCTCC	2 cut(s)	1205, 1235
Bsc4I	CCNNNNNNNGG	2 cut(s)	546, 1230
Bse1I	ACTGG	4 cut(s)	248, 378, 673, 1546
Bse8I	GATNNNNATC	2 cut(s)	908, 1389
BseBI	CCWGG	4 cut(s)	527, 547, 1581, 1625
BseDI	CCNNGG	2 cut(s)	526, 771
BseGI	GGATG	5 cut(s)	21, 280, 754, 1240, 1315
BseJI	GATNNNNATC	2 cut(s)	908, 1389
BseLI	CCNNNNNNNGG	2 cut(s)	546, 1230
BseMII	CTCAG	2 cut(s)	192, 1128
BseNI	ACTGG	4 cut(s)	248, 378, 673, 1546
BseRI	GAGGAG	4 cut(s)	234, 659, 662, 1088
BseXI	GCAGC	5 cut(s)	820, 1068, 1245, 1267, 1303
BseYI	CCCAGC	3 cut(s)	57, 194, 1034
Bsh1236I	CGCG	3 cut(s)	168, 676, 1801
BshFI	GGCC	4 cut(s)	653, 1114, 1220, 1375
BsiHKAI	GWGCWC	1 cut(s)	486
BsiHKCI	CYCGRG	1 cut(s)	829
BsiSI	CCGG	2 cut(s)	342, 1436
BslFI	GGGAC	7 cut(s)	74, 129, 211, 536, 1016, 1041, 1881
BslI	CCNNNNNNNGG	2 cut(s)	546, 1230
BsmAI	GTCTC	5 cut(s)	350, 916, 1434, 1755, 1802
BsmFI	GGGAC	7 cut(s)	74, 129, 211, 536, 1016, 1041, 1881
BsnI	GGCC	4 cut(s)	653, 1114, 1220, 1375
Bso31I	GGTCTC	1 cut(s)	350
BsoBI	CYCGRG	1 cut(s)	829
Bsp1286I	GDGCHC	2 cut(s)	486, 1515
Bsp19I	CCATGG	1 cut(s)	771
BspACI	CCGC	3 cut(s)	1000, 1079, 1799
BspANI	GGCC	4 cut(s)	653, 1114, 1220, 1375
BspCNI	CTCAG	2 cut(s)	193, 1129
BspFNI	CGCG	3 cut(s)	168, 676, 1801
BspHI	TCATGA	1 cut(s)	1852
BspLI	GGNNCC	4 cut(s)	524, 1194, 1512, 1787
BspMAI	CTGCAG	2 cut(s)	1263, 1448
BspPI	GGATC	1 cut(s)	703
BspTNI	GGTCTC	1 cut(s)	350
BsrI	ACTGG	4 cut(s)	248, 378, 673, 1546
BssECI	CCNNGG	2 cut(s)	526, 771
BssT1I	CCWWGG	1 cut(s)	771
Bst2UI	CCWGG	4 cut(s)	527, 547, 1581, 1625
Bst4CI	ACNGT	2 cut(s)	65, 1620
BstC8I	GCNNGC	3 cut(s)	170, 255, 1269
BstDEI	CTNAG	7 cut(s)	32, 83, 201, 1137, 1181, 1206, 1320
BstDSI	CCRYGG	1 cut(s)	771
BstF5I	GGATG	5 cut(s)	21, 280, 754, 1240, 1315
BstFNI	CGCG	3 cut(s)	168, 676, 1801
BstHHI	GCGC	3 cut(s)	168, 678, 1803
BstMAI	GTCTC	5 cut(s)	350, 916, 1434, 1755, 1802
BstMWI	GCNNNNNNNGC	1 cut(s)	1264
BstNI	CCWGG	4 cut(s)	527, 547, 1581, 1625
BstNSI	RCATGY	2 cut(s)	261, 605
BstSCI	CCNGG	6 cut(s)	341, 525, 545, 1435, 1579, 1623
BstSFI	CTRYAG	2 cut(s)	1259, 1444
BstUI	CGCG	3 cut(s)	168, 676, 1801
BstV1I	GCAGC	5 cut(s)	820, 1068, 1245, 1267, 1303
BstV2I	GAAGAC	2 cut(s)	96, 1444
BstX2I	RGATCY	1 cut(s)	35
BstYI	RGATCY	1 cut(s)	35
BsuI	GTATCC	4 cut(s)	259, 778, 1075, 1723
BsuRI	GGCC	4 cut(s)	653, 1114, 1220, 1375
BtgI	CCRYGG	1 cut(s)	771
BtgZI	GCGATG	1 cut(s)	911
BtsCI	GGATG	5 cut(s)	21, 280, 754, 1240, 1315
BtsI	GCAGTG	1 cut(s)	1453
BtsIMutI	CAGTG	3 cut(s)	255, 1453, 1616
Cac8I	GCNNGC	3 cut(s)	170, 255, 1269
CciI	TCATGA	1 cut(s)	1852
CfoI	GCGC	3 cut(s)	168, 678, 1803
Cfr13I	GGNCC	3 cut(s)	523, 652, 1218
Csp6I	GTAC	4 cut(s)	414, 429, 672, 965
CviQI	GTAC	4 cut(s)	414, 429, 672, 965
DdeI	CTNAG	7 cut(s)	32, 83, 201, 1137, 1181, 1206, 1320
DrdI	GACNNNNNNGTC	1 cut(s)	1448
DseDI	GACNNNNNNGTC	1 cut(s)	1448
EciI	GGCGGA	1 cut(s)	1094
Ecl136II	GAGCTC	1 cut(s)	484
Eco130I	CCWWGG	1 cut(s)	771
Eco147I	AGGCCT	1 cut(s)	1375
Eco24I	GRGCYC	2 cut(s)	486, 1515
Eco31I	GGTCTC	1 cut(s)	350
Eco32I	GATATC	1 cut(s)	478
Eco47I	GGWCC	1 cut(s)	523
Eco53kI	GAGCTC	1 cut(s)	484
Eco57I	CTGAAG	2 cut(s)	849, 1639
Eco88I	CYCGRG	1 cut(s)	829
EcoICRI	GAGCTC	1 cut(s)	484
EcoO109I	RGGNCCY	2 cut(s)	652, 1218
EcoRI	GAATTC	1 cut(s)	1419
EcoRII	CCWGG	4 cut(s)	525, 545, 1579, 1623
EcoRV	GATATC	1 cut(s)	478
EcoT14I	CCWWGG	1 cut(s)	771
EcoT38I	GRGCYC	2 cut(s)	486, 1515
ErhI	CCWWGG	1 cut(s)	771
FalI	AAGNNNNNCTT	2 cut(s)	1275, 1307
FaqI	GGGAC	7 cut(s)	74, 129, 211, 536, 1016, 1041, 1881
FauI	CCCGC	1 cut(s)	993
FauNDI	CATATG	2 cut(s)	760, 1477
FbaI	TGATCA	7 cut(s)	6, 976, 1297, 1363, 1387, 1399, 1489
Fnu4HI	GCNGC	5 cut(s)	809, 1057, 1256, 1259, 1317
FokI	GGATG	5 cut(s)	8, 267, 741, 1247, 1322
FriOI	GRGCYC	2 cut(s)	486, 1515
Fsp4HI	GCNGC	5 cut(s)	809, 1057, 1256, 1259, 1317
FspBI	CTAG	6 cut(s)	308, 435, 641, 660, 915, 1772
GlaI	GCGC	3 cut(s)	167, 677, 1802
GluI	GCNGC	5 cut(s)	809, 1057, 1256, 1259, 1317
GsaI	CCCAGC	3 cut(s)	61, 198, 1038
GsuI	CTGGAG	1 cut(s)	231
HaeIII	GGCC	4 cut(s)	653, 1114, 1220, 1375
HapII	CCGG	2 cut(s)	342, 1436
HhaI	GCGC	3 cut(s)	168, 678, 1803
Hin6I	GCGC	3 cut(s)	166, 676, 1801
HinP1I	GCGC	3 cut(s)	166, 676, 1801
HindIII	AAGCTT	2 cut(s)	1157, 1407
HinfI	GANTC	4 cut(s)	536, 748, 1004, 1763
HpaII	CCGG	2 cut(s)	342, 1436
HphI	GGTGA	1 cut(s)	1877
Hpy166II	GTNNAC	1 cut(s)	1616
Hpy188I	TCNGA	7 cut(s)	695, 728, 1051, 1065, 1339, 1347, 1658
Hpy188III	TCNNGA	8 cut(s)	76, 456, 496, 831, 884, 1283, 1394, 1853
Hpy8I	GTNNAC	1 cut(s)	1616
HpyAV	CCTTC	4 cut(s)	330, 453, 1143, 1663
HpyCH4III	ACNGT	2 cut(s)	65, 1620
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1264
HpyF3I	CTNAG	7 cut(s)	32, 83, 201, 1137, 1181, 1206, 1320
HspAI	GCGC	3 cut(s)	166, 676, 1801
Ksp22I	TGATCA	7 cut(s)	6, 976, 1297, 1363, 1387, 1399, 1489
LmnI	GCTCC	2 cut(s)	443, 1510
Lsp1109I	GCAGC	5 cut(s)	820, 1068, 1245, 1267, 1303
LweI	GCATC	7 cut(s)	208, 289, 763, 888, 1225, 1303, 1649
MaeI	CTAG	6 cut(s)	308, 435, 641, 660, 915, 1772
MaeIII	GTNAC	5 cut(s)	569, 616, 989, 1630, 1645
MfeI	CAATTG	2 cut(s)	1239, 1532
MflI	RGATCY	1 cut(s)	35
MhlI	GDGCHC	2 cut(s)	486, 1515
MluCI	AATT	9 cut(s)	132, 742, 787, 812, 820, 1239, 1341, 1419, 1532
MlyI	GAGTC	2 cut(s)	998, 1757
MmeI	TCCRAC	3 cut(s)	673, 1029, 1191
MroXI	GAANNNNTTC	1 cut(s)	1562
MseI	TTAA	4 cut(s)	386, 410, 1161, 1793
MslI	CAYNNNNRTG	3 cut(s)	759, 938, 1395
MspA1I	CMGCKG	1 cut(s)	1258
MspI	CCGG	2 cut(s)	342, 1436
MspR9I	CCNGG	6 cut(s)	343, 527, 547, 1437, 1581, 1625
MunI	CAATTG	2 cut(s)	1239, 1532
MvaI	CCWGG	4 cut(s)	527, 547, 1581, 1625
MvnI	CGCG	3 cut(s)	168, 676, 1801
MwoI	GCNNNNNNNGC	1 cut(s)	1264
NciI	CCSGG	2 cut(s)	343, 1437
NcoI	CCATGG	1 cut(s)	771
NdeI	CATATG	2 cut(s)	760, 1477
NlaIV	GGNNCC	4 cut(s)	524, 1194, 1512, 1787
NmeAIII	GCCGAG	1 cut(s)	1490
NmuCI	GTSAC	2 cut(s)	616, 1645
NspI	RCATGY	2 cut(s)	261, 605
PagI	TCATGA	1 cut(s)	1852
PceI	AGGCCT	1 cut(s)	1375
PdmI	GAANNNNTTC	1 cut(s)	1562
PfeI	GAWTC	2 cut(s)	536, 748
PfoI	TCCNGGA	1 cut(s)	341
PkrI	GCNGC	5 cut(s)	810, 1058, 1257, 1260, 1318
PleI	GAGTC	2 cut(s)	998, 1757
PpsI	GAGTC	2 cut(s)	998, 1757
Psp124BI	GAGCTC	1 cut(s)	486
Psp6I	CCWGG	4 cut(s)	525, 545, 1579, 1623
PspFI	CCCAGC	3 cut(s)	57, 194, 1034
PspGI	CCWGG	4 cut(s)	525, 545, 1579, 1623
PspN4I	GGNNCC	4 cut(s)	524, 1194, 1512, 1787
PspPI	GGNCC	3 cut(s)	523, 652, 1218
PstI	CTGCAG	2 cut(s)	1263, 1448
PsuI	RGATCY	1 cut(s)	35
PvuII	CAGCTG	1 cut(s)	1258
RsaI	GTAC	4 cut(s)	415, 430, 673, 966
RsaNI	GTAC	4 cut(s)	414, 429, 672, 965
RseI	CAYNNNNRTG	3 cut(s)	759, 938, 1395
SacI	GAGCTC	1 cut(s)	486
SaqAI	TTAA	4 cut(s)	386, 410, 1161, 1793
SatI	GCNGC	5 cut(s)	809, 1057, 1256, 1259, 1317
Sau96I	GGNCC	3 cut(s)	523, 652, 1218
SchI	GAGTC	2 cut(s)	998, 1757
ScrFI	CCNGG	6 cut(s)	343, 527, 547, 1437, 1581, 1625
SduI	GDGCHC	2 cut(s)	486, 1515
SfaNI	GCATC	7 cut(s)	208, 289, 763, 888, 1225, 1303, 1649
SfcI	CTRYAG	2 cut(s)	1259, 1444
SinI	GGWCC	1 cut(s)	523
SmiMI	CAYNNNNRTG	3 cut(s)	759, 938, 1395
SmlI	CTYRAG	1 cut(s)	1116
SmoI	CTYRAG	1 cut(s)	1116
SpeI	ACTAGT	1 cut(s)	914
Sse9I	AATT	9 cut(s)	132, 742, 787, 812, 820, 1239, 1341, 1419, 1532
SseBI	AGGCCT	1 cut(s)	1375
SsiI	CCGC	3 cut(s)	1000, 1079, 1799
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	6 cut(s)	308, 435, 641, 660, 915, 1772
SstI	GAGCTC	1 cut(s)	486
StuI	AGGCCT	1 cut(s)	1375
StyD4I	CCNGG	6 cut(s)	341, 525, 545, 1435, 1579, 1623
StyI	CCWWGG	1 cut(s)	771
TaaI	ACNGT	2 cut(s)	65, 1620
TaqI	TCGA	2 cut(s)	480, 559
TasI	AATT	9 cut(s)	132, 742, 787, 812, 820, 1239, 1341, 1419, 1532
TatI	WGTACW	1 cut(s)	413
TfiI	GAWTC	2 cut(s)	536, 748
Tru1I	TTAA	4 cut(s)	386, 410, 1161, 1793
Tru9I	TTAA	4 cut(s)	386, 410, 1161, 1793
TscAI	CASTG	3 cut(s)	255, 1453, 1623
TseFI	GTSAC	2 cut(s)	616, 1645
TseI	GCWGC	5 cut(s)	808, 1056, 1255, 1258, 1316
Tsp45I	GTSAC	2 cut(s)	616, 1645
TspDTI	ATGAA	6 cut(s)	129, 711, 812, 1412, 1464, 1669
TspGWI	ACGGA	2 cut(s)	1554, 1835
TspRI	CASTG	3 cut(s)	255, 1453, 1623
VpaK11BI	GGWCC	1 cut(s)	523
XapI	RAATTY	3 cut(s)	742, 1341, 1419
XceI	RCATGY	2 cut(s)	261, 605
XcmI	CCANNNNNNNNNTGG	1 cut(s)	218
XmnI	GAANNNNTTC	1 cut(s)	1562
XspI	CTAG	6 cut(s)	308, 435, 641, 660, 915, 1772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.